Cp4.1LG08g01960 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g01960
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG08 : 3014903 .. 3017576 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATGGTCGGGTGAGATCGAATTATTGACGTTTTATTGAAATTACATGATATTATTATTTGTTTAATTAGGAATCAAAATTGGAGGGCAAAAATGACGTACTGAATTGGACGCGTCCAAGCAACGCCAAGGCGGTCGATACTCTTTGATGGTATAAACATAAAGGGTGAGGAATAAGCGTCAAAGTTCAAATCAATCTCTGTTTTGTACGTCTCTGTCTCTCCTAATCGCCATTTTCACGGAGCACACCAAAATCTCTCTTGCATCGTAAGCAATCACTCTCTCTCTCTCACTCTTTTTTTGTTTTTTCTTTTTGTTCTTAGATTTATCATCGATTTTTTGTGGTTTTGTTTCATCGCATTTCTTCGTGTTGTGGATTTATTGCTAGGAGAACTTGTTTGTCTCTGTAAACTGTTTTTGATTCCGGTTTCTGGTTCTAATCTCCATCATTCACCGTTTGTTCAAGTTATCTCCATTTTTATTGTGATTATGTTCTCATGAATTTCACTCGGATGCTTTTCTTTTTCATTTTCGTCCTCTCTGGAATTTTTTGAACTTCTTTTTCGAAAAACGATTGAACGTAGGTTAGTTTTTAAAGATCGTTTCATCTGCGAGTTTGTCGGTGTTCTTCAGTTCATATTTTGCTGTTTATCGTTCATCGCCACTATAGGTCGCCTTCGAAGTTGTAGTGTTAAAGTTTTTGATCGATTCCGTTGCGAACTTTGAATGTTTTGATGTTGAATTAATGAGTGAATATGATTTTACCGGAAAATAGCTTGAACTAATTGGTTGAATAATCTATTCCTTTGTTTGATTGATTCTGGCGTAGACTGTTGCGAAGGATCATGTGCATAGAATCGTAAATTTCGCTGAGTTAATCTTATTTGATCGTATGTAATTTTAGTTGATCTTTAATTAGTTTCGAAAGAATTGAATGAGCAAAAACTTAAACCTCAATCGATAAATGATTCGAGGACACCAGAAATTTCTTCCATATAAGCCTCTGGTTTTTCATCTGGATTCATTCTGTTCATTTAGGGACCAACACAAATTTTCCCCCAATCATGTAAAATTACTTGTTGATATAACAATATCTTGTTTCTAGTCTGTTCATAGTTTGGTTACTGCTCTCGGATTCTTAAAGAAATATGGGAGGTGGGAAGGACAAGGACACTAATGACAGGGGCCTGCTTTCACATATGGCAGCGTTTGCTGCAGGGAACCACTACTCTCGTCCTCATGGATATCCACCACCACCGCCATGCGCCGGTGCTGGATATGTTCCTTCGGTAGGGTACCCTCCGGCTGGGTATCCCCCTCCCGGCGGATATCCTCCGGCTGGCTATCCTTATCACGGCGGATGCCCTCCCGCTGGCTATCCTGGTCATCATCACTACCCTGGTATTATCACATTCTAGTGTTTGATTTGATGACTTCGTTACTTGATATTTTCTTCTTATTGATTAAAAGCGAAAATAACTTTTTATCCCTAAAATTTAAAATGTTATTTAATTTATATTTGGTTTATAAGTTTTAAAATATTACATTTCTTATTTTAGTTTCAATATTGTCCTTATATTTTAAAATTTTACACAGTTTTTTATTATTTTTGTTAATTTTCTATTAATTAAATTAATAAAGTATCACTAATTTTTCATCACTATTAAAATTATTTTAAAATCGTCATAATATTTATAAATTAATGAATAAAAAAGTCCAATACTAAGAACTAAAAATACCACTAGAGTAATATTTATTAGTGAAAACTCAGGGTCAAAGTATAAAATCTTAAAATGTAAATAAAATTAAACTCAAAATTAAATGGCAAGTAGCATTTTAGGACATATGGACTAAATTTAAAACTAAATATTTTGAAAAGAAACTATAATTTAAAAAATTATTTTTCCTTTTATTTAATGAGTTTGAACACTATCCTTGGCCACTAGAGTTTTTGAGATTTAAAATGAAGAACAACCCCAATTAAAAAAATATATTTAAAAAACTTAAAGAGAATAGAATTTTATAATTTGAAGATTCGAGTGGATGTTTGGAATAAGAATCCATAACAGTTTAATCAATATGGAGGAAAAAAAGTGTTGTTGCTAACTAGTTTATTAGATATCGCACTTGCATTTGTTTGTTGATGATTTGTTGTTTCCAGGCCATGGACACGGACACGGCATGGGGGGGTTGTTGGCTGGCGGAGCAGCTGCCGCCGCCGCCGCTTACGGTGCTCACCATGTTGTTCATGCACACCCATTTGGCTATGGTTACGGAAGGTTCAAACATGGGAAATTTGGGAAGCGTTGGAAGCATGGAGGTAAGTTCATGAAATTCAAGAAATGGAAGTGATCAAATTGCTACCTATCTATGTTGGATATATATATATATATATATATATCGTTGTGTGAGTTTTGAGTCTAAACCTAGAAAACTAAATAATGGTATCTTATTGCTTGTACTTTGGTTGTGATATTGGCTTCTTATGTAAACAATGCGATCTTTTTTTTTTTTTTTCNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAACAAAAACCAGTTCATACACCAGTTCTTTTGACCGTTTATCTGCCATGTGAATGGACAAGGTATTGTTTATTATTTCATATATGCCTTGGAAAAGAAGTATATTAAAAGTGATTTCAAAATT

mRNA sequence

TATGGTCGGGTGAGATCGAATTATTGACGTTTTATTGAAATTACATGATATTATTATTTGTTTAATTAGGAATCAAAATTGGAGGGCAAAAATGACGTACTGAATTGGACGCGTCCAAGCAACGCCAAGGCGGTCGATACTCTTTGATGGTATAAACATAAAGGGTGAGGAATAAGCGTCAAAGTTCAAATCAATCTCTGTTTTGTACGTCTCTGTCTCTCCTAATCGCCATTTTCACGGAGCACACCAAAATCTCTCTTGCATCTCTGTTCATAGTTTGGTTACTGCTCTCGGATTCTTAAAGAAATATGGGAGGTGGGAAGGACAAGGACACTAATGACAGGGGCCTGCTTTCACATATGGCAGCGTTTGCTGCAGGGAACCACTACTCTCGTCCTCATGGATATCCACCACCACCGCCATGCGCCGGTGCTGGATATGTTCCTTCGGTAGGGTACCCTCCGGCTGGGTATCCCCCTCCCGGCGGATATCCTCCGGCTGGCTATCCTTATCACGGCGGATGCCCTCCCGCTGGCTATCCTGGTCATCATCACTACCCTGGCCATGGACACGGACACGGCATGGGGGGGTTGTTGGCTGGCGGAGCAGCTGCCGCCGCCGCCGCTTACGGTGCTCACCATGTTGTTCATGCACACCCATTTGGCTATGGTTACGGAAGGTTCAAACATGGGAAATTTGGGAAGCGTTGGAAGCATGGAGGTAAGTTCATGAAATTCAAGAAATGGAAGTGATCAAATTGCTACCTATCTATGTTGGATATATATATATATATATATATATCGTTGTGTGAGTTTTGAGTCTAAACCTAGAAAACTAAATAATGGTATCTTATTGCTTGTACTTTGGTTGTGATATTGGCTTCTTATGTAAACAATGCGATCTTTTTTTTTTTTTTTCNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAACAAAAACCAGTTCATACACCAGTTCTTTTGACCGTTTATCTGCCATGTGAATGGACAAGGTATTGTTTATTATTTCATATATGCCTTGGAAAAGAAGTATATTAAAAGTGATTTCAAAATT

Coding sequence (CDS)

ATGGGAGGTGGGAAGGACAAGGACACTAATGACAGGGGCCTGCTTTCACATATGGCAGCGTTTGCTGCAGGGAACCACTACTCTCGTCCTCATGGATATCCACCACCACCGCCATGCGCCGGTGCTGGATATGTTCCTTCGGTAGGGTACCCTCCGGCTGGGTATCCCCCTCCCGGCGGATATCCTCCGGCTGGCTATCCTTATCACGGCGGATGCCCTCCCGCTGGCTATCCTGGTCATCATCACTACCCTGGCCATGGACACGGACACGGCATGGGGGGGTTGTTGGCTGGCGGAGCAGCTGCCGCCGCCGCCGCTTACGGTGCTCACCATGTTGTTCATGCACACCCATTTGGCTATGGTTACGGAAGGTTCAAACATGGGAAATTTGGGAAGCGTTGGAAGCATGGAGGTAAGTTCATGAAATTCAAGAAATGGAAGTGA

Protein sequence

MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGYVPSVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYPGHGHGHGMGGLLAGGAAAAAAAYGAHHVVHAHPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK
Homology
[Close]
BLAST of Cp4.1LG08g01960 vs. Swiss-Prot
Match: GRP3_DAUCA (Glycine-rich protein A3 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 9.7e-18
Identity = 71/146 (48.63%), Postives = 84/146 (57.53%), Query Frame = 1 

Query: 1   MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPP----PPCAGAGYVPSVG-YPPAGY 60
           MGGG   +  D+GL S++A   AG  +  P  YPP     PP    GY P+ G YPP GY
Sbjct: 1   MGGGDGHNDQDKGLFSNLAGGLAGGGHYPPGQYPPAAGGYPP---QGYPPAGGGYPPQGY 60

Query: 61  PPPGG-YPPAGYP-YHGGCPPAGYP--GHH------HYPGHGHGHGMGGLLAGGAAAAAA 120
           PP GG YPP GYP   GG PP GYP  GHH      H+ GHG   G+ G++AGG AAAAA
Sbjct: 61  PPAGGGYPPQGYPPAGGGYPPQGYPPAGHHSGSSAPHHSGHG---GVAGMVAGGRAAAAA 120

Query: 121 AYGAHHVVHAHPFGYGYGRFKHGKFG 132
           AYG HH+   H    G+G + HG  G
Sbjct: 121 AYGVHHMTQGHGSHGGHGGYAHGAMG 140

[Close]
BLAST of Cp4.1LG08g01960 vs. TrEMBL
Match: A0A0A0L4F2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126870 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.2e-45
Identity = 107/161 (66.46%), Postives = 120/161 (74.53%), Query Frame = 1 

Query: 1   MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGY-----VPSVGYPPAGY 60
           MGGGK+ +  D+GL S+MAAFAAG+HY   HGYPPPP   GA Y      P  GYPP GY
Sbjct: 1   MGGGKENEDKDKGLFSNMAAFAAGHHYPHHHGYPPPP-YGGAAYPPPGGYPPPGYPPTGY 60

Query: 61  PPPGGYPPAGYPYHGGCPPAGYPGHHHYPGHG----HGHGMGGLLAGGAAAAAAAYGAHH 120
           PP GG+P   YP  GG PPAGYPG HHYPG+G    HGHG+GGLLAGGAAAAAAAYGAHH
Sbjct: 61  PPYGGHPHTAYPPPGGYPPAGYPGPHHYPGYGHGYGHGHGVGGLLAGGAAAAAAAYGAHH 120

Query: 121 VVHAHPFGYG-----YGRFKHGKFGKRWKHGGKFMKFKKWK 148
           + HA PFG+G     +G+FKHGKFGKRWKHGG  M+FKKWK
Sbjct: 121 LAHARPFGFGHGKFKHGKFKHGKFGKRWKHGG--MRFKKWK 158

[Close]
BLAST of Cp4.1LG08g01960 vs. TrEMBL
Match: A0A061F0Z6_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_025731 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.1e-35
Identity = 108/187 (57.75%), Postives = 123/187 (65.78%), Query Frame = 1 

Query: 1   MGGGKDK---DTNDRGLLSHMAAFAAGNHYSRP-----HGYPP--------PPPCAGAGY 60
           MGGGKDK   +++D+GL S++A +AAG HY  P     HGYPP        PPP    GY
Sbjct: 1   MGGGKDKNEGESSDKGLFSNLAGYAAG-HYPPPGSYPSHGYPPQGYPPAGYPPP---GGY 60

Query: 61  VPSVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGH-----HHYPGHG-HGHGMGGLLAG 120
            P  GYPPAGYPPPGG+PPA YP HGG PPAGYP H       YPGHG HGHG+GGL+AG
Sbjct: 61  PPPGGYPPAGYPPPGGHPPAAYPPHGGYPPAGYPPHGGYPPAGYPGHGSHGHGVGGLIAG 120

Query: 121 GAAAAAAAYGAHHVVH-----AHP--FGYGYGRFKHGKF--GKRWKHG---------GKF 148
           GAAAAAAAYGAHHV H     AH   +G+G+G+FKHGKF  GK  KHG         GKF
Sbjct: 121 GAAAAAAAYGAHHVAHGAHNLAHGGYYGHGHGKFKHGKFKHGKFGKHGRPGMFGKHKGKF 180

[Close]
BLAST of Cp4.1LG08g01960 vs. TrEMBL
Match: A0A067KTQ5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02626 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 4.3e-33
Identity = 100/175 (57.14%), Postives = 112/175 (64.00%), Query Frame = 1 

Query: 1   MGGGKDKDT-NDRGLLSHMAAFAAGNHYS-RPHGYPPPP--------PCAG----AGYVP 60
           MGGGKD+   ND+GL SH+A +AAG+HY  +PHGYPP P        P  G     GY P
Sbjct: 1   MGGGKDEHNHNDKGLFSHLAGYAAGHHYPPQPHGYPPQPHGYPPQPYPQQGYPPPPGYPP 60

Query: 61  SVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYPGHGHGHGMGGLLAGGAAAAAAA 120
             GYPPAGYPP GGYPPAGYP  GG  PAGYPG       GHG GMG LLAGGAAAAAAA
Sbjct: 61  PGGYPPAGYPPQGGYPPAGYPPSGGYAPAGYPGPSAAHHSGHGPGMGALLAGGAAAAAAA 120

Query: 121 YGAHHVVHAHPFGYGY-----------GRFKHGKFGKR---WKHGGKFMKFKKWK 148
           YGAH + H H +G+G+           G+FKHGKFGK     KH GKF  FK+WK
Sbjct: 121 YGAHQLSHGHGYGHGFGHGFGHGKFKHGKFKHGKFGKHGMFGKHKGKF--FKRWK 173

[Close]
BLAST of Cp4.1LG08g01960 vs. TrEMBL
Match: A0A068V6S0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00017313001 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.8e-32
Identity = 105/183 (57.38%), Postives = 116/183 (63.39%), Query Frame = 1 

Query: 4   GKDKDTNDRGLLSHMAAFAAGNHYSRPHG-YP-PPPPCA--GAGYVPSVGYPPAGYPPPG 63
           G + D  D+GL SH+A +AAG HY RPHG YP PPPP A   AGY P  GYPP+GYPPPG
Sbjct: 2   GDNDDNRDKGLFSHLAGYAAG-HYPRPHGAYPYPPPPGAYPPAGYPPPGGYPPSGYPPPG 61

Query: 64  GYPPAGYPY--------------HGGCPPAGYPG---HHHYPGHGHGHGMGGLLAGGAAA 123
           GYPP+GYP               HGG PPAGYPG   HHH    GHG  MG LLAGGAAA
Sbjct: 62  GYPPSGYPSPAGYPPAPPPGYPPHGGYPPAGYPGPSAHHH---SGHGPPMGALLAGGAAA 121

Query: 124 AAAAYGAHHVVH-AHPFGYG------YGRFKHGKFGK-----RWKHG------GKFMKFK 148
           AAAAYGAHH+ H AH  G+G      +G+FKHGKFGK     R KHG       KFM FK
Sbjct: 122 AAAAYGAHHLAHGAHHSGHGGYYGHHHGKFKHGKFGKHGFYGRHKHGFFGKHKHKFMGFK 180

[Close]
BLAST of Cp4.1LG08g01960 vs. TrEMBL
Match: A0A151THL6_CAJCA (Glycine-rich protein A3 OS=Cajanus cajan GN=KK1_012825 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.4e-31
Identity = 102/176 (57.95%), Postives = 112/176 (63.64%), Query Frame = 1 

Query: 1   MGGGKDKDTN-DRGLLSHMAAFAAGNHYSRPHGYPPPPPCA---GAGYVPSVGYPPAGYP 60
           MGGGKDK  + D+G+ SH+A   A   +  PHG  PPPP A   G GY P  GYPPAGYP
Sbjct: 1   MGGGKDKHNDEDKGIFSHLAHGVAQAAHGYPHGAYPPPPGAYPPGHGYPPQAGYPPAGYP 60

Query: 61  PPGGYPPAGYPYHG----GCPPAGYPGH--------HHYPGHGHGHGMGGLLAGGAAAAA 120
           P GGYPPAGYP  G    G PPAGYP H        H   GHGHG GMG LLAGG AAAA
Sbjct: 61  PAGGYPPAGYPPAGYPPSGYPPAGYPPHGYHGSSVPHGSHGHGHGGGMGALLAGGVAAAA 120

Query: 121 AAYGAHHVVHAHPFGYG---------YGRFKHGKFGK--RWKHGGKFMK--FKKWK 148
           A YGAHHV H H +GYG         +G+FKHGKFGK  ++KH GKF K  FKKWK
Sbjct: 121 ATYGAHHVSHGH-YGYGHMPHGKFKHHGKFKHGKFGKHGKFKH-GKFGKGMFKKWK 174

[Close]
BLAST of Cp4.1LG08g01960 vs. TAIR10
Match: AT4G19200.1 (AT4G19200.1 proline-rich family protein)

HSP 1 Score: 102.8 bits (255), Expect = 1.8e-22
Identity = 89/187 (47.59%), Postives = 101/187 (54.01%), Query Frame = 1 

Query: 1   MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHG-YPPPPPCAGAGYVPSVGYPPAGYPP-- 60
           MGGGKDK  +++    H   F  G HY    G YPP       GY P+ GYPPAGYPP  
Sbjct: 1   MGGGKDKHHDEQEKGFH--GFPGGGHYPPAQGGYPPQGYPPQQGYPPAGGYPPAGYPPGA 60

Query: 61  ----PGGYPPAGYPYHGGCPPAGYP--GHHHYPGHGHGHGMGGLLAGGAAAAAAAYGAHH 120
               PGGYPPA     GG PPAGYP  G HH  GH  G G+GG++AG A AAAAAYGAHH
Sbjct: 61  YPAAPGGYPPAP----GGYPPAGYPAPGAHH-SGHSGG-GLGGMIAGAAGAAAAAYGAHH 120

Query: 121 VVH-------------------AHPFGY-GYGRFKHGKFGKRWKHG-----------GKF 148
           V H                   AH FG+ G+G+FKHGK G ++KHG           G  
Sbjct: 121 VGHASHNPYGHAVGHGGYGHAPAHGFGHGGHGKFKHGKHGGKFKHGKHGKHGKHGMFGGG 179

[Close]
BLAST of Cp4.1LG08g01960 vs. TAIR10
Match: AT5G17650.1 (AT5G17650.1 glycine/proline-rich protein)

HSP 1 Score: 100.9 bits (250), Expect = 6.9e-22
Identity = 85/181 (46.96%), Postives = 96/181 (53.04%), Query Frame = 1 

Query: 3   GGKDKDTNDRGLLSHMAAFAAGNHYSRPHGY-------------PPPPPCAG---AGYVP 62
           G    + +DRG   ++A FA G +    HGY             PPPPP  G     Y P
Sbjct: 2   GNDQHNHSDRGFFHNLAGFAGGQYPPHGHGYGHHGHGYGSSYPYPPPPPPHGYPPVAYPP 61

Query: 63  SVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYPGHGHGHGMGGLLAGGAAAAAAA 122
             GYPPAGY PP GYPPAGYP H G P  GYP   H  GH HG G+G ++AGG AAAA  
Sbjct: 62  HGGYPPAGY-PPAGYPPAGYPAH-GYPSHGYPRPSH-SGHHHG-GIGAIIAGGVAAAA-- 121

Query: 123 YGAHHVV---------HAHPFGYGY--------GRFKHGKFGKR---WKHGGKFMKFKKW 148
            GAHH+          H H +GYGY        G+FKHGKFGK     KH GKF  FKKW
Sbjct: 122 -GAHHMSHHHGHYGHHHGHGYGYGYHGHGKFKHGKFKHGKFGKHGMFGKHKGKF--FKKW 173

[Close]
BLAST of Cp4.1LG08g01960 vs. TAIR10
Match: AT5G45350.1 (AT5G45350.1 proline-rich family protein)

HSP 1 Score: 92.8 bits (229), Expect = 1.9e-19
Identity = 87/191 (45.55%), Postives = 95/191 (49.74%), Query Frame = 1 

Query: 1   MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYP----PPPPCAGAGYVPSVGYPPAGYP 60
           MGG  D D  D+G   +  A         P GYP    PPPP    G  P  GYPP  YP
Sbjct: 1   MGGDNDND-KDKGFHGYPPAGYPPPGAYPPAGYPQQGYPPPP----GAYPPAGYPPGAYP 60

Query: 61  P-PGGYPPA-GY---------------PYHGGCPPAGYPGHHHYPGHGHGHGMGGLLAGG 120
           P PGGYPPA GY               P HGG PPAGYP HH     GH  G+GG++AG 
Sbjct: 61  PAPGGYPPAPGYGGYPPAPGYGGYPPAPGHGGYPPAGYPAHHS----GHAGGIGGMIAG- 120

Query: 121 AAAAAAAYGAHHVVHA---------------HPFGYGY----GRFKHGKFGKRWKHGGKF 148
              AAAAYGAHHV H+               H  GYGY    G+FKHGK GK +KHG   
Sbjct: 121 ---AAAAYGAHHVAHSSHGPYGHAAYGHGFGHGHGYGYGHGHGKFKHGKHGK-FKHGKHG 177

[Close]
BLAST of Cp4.1LG08g01960 vs. TAIR10
Match: AT1G31750.1 (AT1G31750.1 proline-rich family protein)

HSP 1 Score: 85.1 bits (209), Expect = 3.9e-17
Identity = 77/156 (49.36%), Postives = 88/156 (56.41%), Query Frame = 1 

Query: 3   GGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPP---PPPCAGAGYVPSVGYPPAGYPPPG 62
           G  D    D+   SH       NH+   HGYPP   PPP  GA Y P  GYPP GYPPP 
Sbjct: 2   GKDDHHEQDKRFFSHH------NHHG--HGYPPGAYPPPPQGA-YPPPGGYPPQGYPPPP 61

Query: 63  -GYPPAGYPYHGGC-PPAGYPGHHHYPGHGHGHGMGGLLAGGAAAAAAAYGAHHVVHAHP 122
            GYPPA YP   G  PPAGYPG    P  G G G+GGL+AG A AAAAA G HH  H   
Sbjct: 62  HGYPPAAYPPPPGAYPPAGYPGPSG-PRPGFGGGVGGLIAGAATAAAAAMGGHHAGHHGG 121

Query: 123 FG-YGYGRFKHGKFG----KRWKH----GGKFMKFK 145
           +G +G+G++K G FG    KR KH    GGK+ + K
Sbjct: 122 YGHHGHGKYKRGFFGGGKYKRGKHSMFGGGKYKRGK 147

[Close]
BLAST of Cp4.1LG08g01960 vs. TAIR10
Match: AT3G49845.1 (AT3G49845.1 unknown protein)

HSP 1 Score: 47.4 bits (111), Expect = 9.0e-06
Identity = 34/61 (55.74%), Postives = 35/61 (57.38%), Query Frame = 1 

Query: 31 HGYPPPPPCAGAGYVPSVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYPGHGHGH 90
          H    PPP    GY P  GYPPAGYPPP GYPP  YP   G PPAGYP     P  G+G 
Sbjct: 8  HPVSAPPP---QGYPPKEGYPPAGYPPPAGYPPPQYP-QAGYPPAGYPP----PQQGYGQ 60

Query: 91 G 92
          G
Sbjct: 68 G 60

[Close]
BLAST of Cp4.1LG08g01960 vs. NCBI nr
Match: gi|659075552|ref|XP_008438205.1| (PREDICTED: glycine-rich protein A3 [Cucumis melo])

HSP 1 Score: 213.8 bits (543), Expect = 2.1e-52
Identity = 112/154 (72.73%), Postives = 124/154 (80.52%), Query Frame = 1 

Query: 1   MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGY-----VPSVGYPPAGY 60
           MGGGK+ +  D+GL S+MAAFAAG+HY   HGYPPPP   GAGY      P  GYPPAGY
Sbjct: 1   MGGGKENEDKDKGLFSNMAAFAAGHHYPHHHGYPPPP-YGGAGYPPPGGYPPAGYPPAGY 60

Query: 61  PPPGGYPPAGYPYHGGCPPAGYPGHHHYPG--HGHGHGMGGLLAGGAAAAAAAYGAHHVV 120
           PP GG+P   YPY GG PPAGYPG HHYPG  HGHGHG+GGLLAGGAAAAAAAYGAHH+ 
Sbjct: 61  PPYGGHPHTAYPYQGGYPPAGYPGPHHYPGYGHGHGHGVGGLLAGGAAAAAAAYGAHHLA 120

Query: 121 HAHPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK 148
           HA PFG+G+G+FKHGKFGKRWKHGGKF +FKKWK
Sbjct: 121 HARPFGFGHGKFKHGKFGKRWKHGGKFGRFKKWK 153

[Close]
BLAST of Cp4.1LG08g01960 vs. NCBI nr
Match: gi|449432291|ref|XP_004133933.1| (PREDICTED: glycine-rich protein A3 [Cucumis sativus])

HSP 1 Score: 189.9 bits (481), Expect = 3.2e-45
Identity = 107/161 (66.46%), Postives = 120/161 (74.53%), Query Frame = 1 

Query: 1   MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGY-----VPSVGYPPAGY 60
           MGGGK+ +  D+GL S+MAAFAAG+HY   HGYPPPP   GA Y      P  GYPP GY
Sbjct: 1   MGGGKENEDKDKGLFSNMAAFAAGHHYPHHHGYPPPP-YGGAAYPPPGGYPPPGYPPTGY 60

Query: 61  PPPGGYPPAGYPYHGGCPPAGYPGHHHYPGHG----HGHGMGGLLAGGAAAAAAAYGAHH 120
           PP GG+P   YP  GG PPAGYPG HHYPG+G    HGHG+GGLLAGGAAAAAAAYGAHH
Sbjct: 61  PPYGGHPHTAYPPPGGYPPAGYPGPHHYPGYGHGYGHGHGVGGLLAGGAAAAAAAYGAHH 120

Query: 121 VVHAHPFGYG-----YGRFKHGKFGKRWKHGGKFMKFKKWK 148
           + HA PFG+G     +G+FKHGKFGKRWKHGG  M+FKKWK
Sbjct: 121 LAHARPFGFGHGKFKHGKFKHGKFGKRWKHGG--MRFKKWK 158

[Close]
BLAST of Cp4.1LG08g01960 vs. NCBI nr
Match: gi|590640091|ref|XP_007029859.1| (Uncharacterized protein isoform 2 [Theobroma cacao])

HSP 1 Score: 156.8 bits (395), Expect = 3.0e-35
Identity = 108/187 (57.75%), Postives = 123/187 (65.78%), Query Frame = 1 

Query: 1   MGGGKDK---DTNDRGLLSHMAAFAAGNHYSRP-----HGYPP--------PPPCAGAGY 60
           MGGGKDK   +++D+GL S++A +AAG HY  P     HGYPP        PPP    GY
Sbjct: 1   MGGGKDKNEGESSDKGLFSNLAGYAAG-HYPPPGSYPSHGYPPQGYPPAGYPPP---GGY 60

Query: 61  VPSVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGH-----HHYPGHG-HGHGMGGLLAG 120
            P  GYPPAGYPPPGG+PPA YP HGG PPAGYP H       YPGHG HGHG+GGL+AG
Sbjct: 61  PPPGGYPPAGYPPPGGHPPAAYPPHGGYPPAGYPPHGGYPPAGYPGHGSHGHGVGGLIAG 120

Query: 121 GAAAAAAAYGAHHVVH-----AHP--FGYGYGRFKHGKF--GKRWKHG---------GKF 148
           GAAAAAAAYGAHHV H     AH   +G+G+G+FKHGKF  GK  KHG         GKF
Sbjct: 121 GAAAAAAAYGAHHVAHGAHNLAHGGYYGHGHGKFKHGKFKHGKFGKHGRPGMFGKHKGKF 180

[Close]
BLAST of Cp4.1LG08g01960 vs. NCBI nr
Match: gi|1000955794|ref|XP_015577786.1| (PREDICTED: glycine-rich protein A3 [Ricinus communis])

HSP 1 Score: 150.2 bits (378), Expect = 2.8e-33
Identity = 109/181 (60.22%), Postives = 117/181 (64.64%), Query Frame = 1 

Query: 1   MGGGKDKDTN---DRGLLSHMAAFAAGNHYSR----PHGYPPPP-PCAG---AGYVPSVG 60
           MGGGKDK  N   D+GLLS++A +AAG H       PHGYPP   P  G   AGY P  G
Sbjct: 1   MGGGKDKPDNESTDKGLLSNLAGYAAGYHTPHGSYAPHGYPPQQYPHQGYPPAGYPPPGG 60

Query: 61  YPPAGYPPPGGYPP------AGYPYHGGCPPAGYPGHH--HYPGHGHGHGMGGLLAGGAA 120
           YPPAGYPPPGGYPP      AGYP  GG PPAGYPG    H+ GHG G GMG LLAGGAA
Sbjct: 61  YPPAGYPPPGGYPPPGGYPPAGYP-PGGYPPAGYPGPSGPHHSGHGSG-GMGTLLAGGAA 120

Query: 121 AAAAAYGAHHVVHAHPFGYGY----------GRFKHGKFGKRWKHGGKFMK-----FKKW 148
           AAAAAYGAHH+ H H  GYGY          G+FKHGKFGKRWK GG F K     FK+W
Sbjct: 121 AAAAAYGAHHLSHGHGHGYGYGGFGHGKFKHGKFKHGKFGKRWK-GGMFGKHKGKMFKRW 178

[Close]
BLAST of Cp4.1LG08g01960 vs. NCBI nr
Match: gi|802585237|ref|XP_012070318.1| (PREDICTED: glycine-rich protein A3 [Jatropha curcas])

HSP 1 Score: 149.1 bits (375), Expect = 6.2e-33
Identity = 100/175 (57.14%), Postives = 112/175 (64.00%), Query Frame = 1 

Query: 1   MGGGKDKDT-NDRGLLSHMAAFAAGNHYS-RPHGYPPPP--------PCAG----AGYVP 60
           MGGGKD+   ND+GL SH+A +AAG+HY  +PHGYPP P        P  G     GY P
Sbjct: 1   MGGGKDEHNHNDKGLFSHLAGYAAGHHYPPQPHGYPPQPHGYPPQPYPQQGYPPPPGYPP 60

Query: 61  SVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYPGHGHGHGMGGLLAGGAAAAAAA 120
             GYPPAGYPP GGYPPAGYP  GG  PAGYPG       GHG GMG LLAGGAAAAAAA
Sbjct: 61  PGGYPPAGYPPQGGYPPAGYPPSGGYAPAGYPGPSAAHHSGHGPGMGALLAGGAAAAAAA 120

Query: 121 YGAHHVVHAHPFGYGY-----------GRFKHGKFGKR---WKHGGKFMKFKKWK 148
           YGAH + H H +G+G+           G+FKHGKFGK     KH GKF  FK+WK
Sbjct: 121 YGAHQLSHGHGYGHGFGHGFGHGKFKHGKFKHGKFGKHGMFGKHKGKF--FKRWK 173

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g01960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GRP3_DAUCA9.7e-1848.63Glycine-rich protein A3 OS=Daucus carota PE=2 SV=1[more]
BLAST of Cp4.1LG08g01960 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4F2_CUCSA2.2e-4566.46Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126870 PE=4 SV=1[more]
A0A061F0Z6_THECC2.1e-3557.75Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_025731 PE=4 SV=1[more]
A0A067KTQ5_JATCU4.3e-3357.14Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02626 PE=4 SV=1[more]
A0A068V6S0_COFCA2.8e-3257.38Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00017313001 PE=4 SV=1[more]
A0A151THL6_CAJCA1.4e-3157.95Glycine-rich protein A3 OS=Cajanus cajan GN=KK1_012825 PE=4 SV=1[more]
BLAST of Cp4.1LG08g01960 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G19200.11.8e-2247.59 proline-rich family protein[more]
AT5G17650.16.9e-2246.96 glycine/proline-rich protein[more]
AT5G45350.11.9e-1945.55 proline-rich family protein[more]
AT1G31750.13.9e-1749.36 proline-rich family protein[more]
AT3G49845.19.0e-0655.74 unknown protein[more]
BLAST of Cp4.1LG08g01960 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075552|ref|XP_008438205.1|2.1e-5272.73PREDICTED: glycine-rich protein A3 [Cucumis melo][more]
gi|449432291|ref|XP_004133933.1|3.2e-4566.46PREDICTED: glycine-rich protein A3 [Cucumis sativus][more]
gi|590640091|ref|XP_007029859.1|3.0e-3557.75Uncharacterized protein isoform 2 [Theobroma cacao][more]
gi|1000955794|ref|XP_015577786.1|2.8e-3360.22PREDICTED: glycine-rich protein A3 [Ricinus communis][more]
gi|802585237|ref|XP_012070318.1|6.2e-3357.14PREDICTED: glycine-rich protein A3 [Jatropha curcas][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g01960.1Cp4.1LG08g01960.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g01960CmaCh06G011510Cucurbita maxima (Rimu)cmacpeB854
Cp4.1LG08g01960CmoCh06G011800Cucurbita moschata (Rifu)cmocpeB796
Cp4.1LG08g01960Carg06366Silver-seed gourdcarcpeB1333
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g01960Cucurbita pepo (Zucchini)cpecpeB194
Cp4.1LG08g01960Cucurbita pepo (Zucchini)cpecpeB344
Cp4.1LG08g01960Cucurbita pepo (Zucchini)cpecpeB482
Cp4.1LG08g01960Cucumber (Gy14) v1cgycpeB0687
Cp4.1LG08g01960Cucumber (Gy14) v1cgycpeB0969
Cp4.1LG08g01960Cucurbita maxima (Rimu)cmacpeB021
Cp4.1LG08g01960Cucurbita maxima (Rimu)cmacpeB292
Cp4.1LG08g01960Cucurbita maxima (Rimu)cmacpeB411
Cp4.1LG08g01960Cucurbita moschata (Rifu)cmocpeB254
Cp4.1LG08g01960Cucurbita moschata (Rifu)cmocpeB373
Cp4.1LG08g01960Wild cucumber (PI 183967)cpecpiB861
Cp4.1LG08g01960Wild cucumber (PI 183967)cpecpiB879
Cp4.1LG08g01960Cucumber (Chinese Long) v2cpecuB859
Cp4.1LG08g01960Cucumber (Chinese Long) v2cpecuB877
Cp4.1LG08g01960Bottle gourd (USVL1VR-Ls)cpelsiB696
Cp4.1LG08g01960Bottle gourd (USVL1VR-Ls)cpelsiB714
Cp4.1LG08g01960Watermelon (Charleston Gray)cpewcgB787
Cp4.1LG08g01960Watermelon (Charleston Gray)cpewcgB790
Cp4.1LG08g01960Watermelon (97103) v1cpewmB845
Cp4.1LG08g01960Watermelon (97103) v1cpewmB854
Cp4.1LG08g01960Melon (DHL92) v3.5.1cpemeB791
Cp4.1LG08g01960Melon (DHL92) v3.5.1cpemeB813
Cp4.1LG08g01960Cucumber (Gy14) v2cgybcpeB454
Cp4.1LG08g01960Cucumber (Gy14) v2cgybcpeB889
Cp4.1LG08g01960Melon (DHL92) v3.6.1cpemedB932
Cp4.1LG08g01960Melon (DHL92) v3.6.1cpemedB951
Cp4.1LG08g01960Silver-seed gourdcarcpeB0329
Cp4.1LG08g01960Silver-seed gourdcarcpeB0885
Cp4.1LG08g01960Cucumber (Chinese Long) v3cpecucB1056
Cp4.1LG08g01960Cucumber (Chinese Long) v3cpecucB1077
Cp4.1LG08g01960Wax gourdcpewgoB1097
Cp4.1LG08g01960Wax gourdcpewgoB1111