Cp4.1LG07g08300 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG07g08300
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	sequence-specific DNA binding transcription factors
Location	Cp4.1LG07 : 7552045 .. 7552431 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTTCTTAGAGAGAAAAAACGCCATAAAAGCGGCCTCCGACTTGGCCATGGCTACAACGAGGAACGGAGCGACTCGTTGGAGTCGAGCCATCATTGCCAAATCCATACAAGCTCCACCTGAGGCCAAGCTTCGAAGGAAGACGATGCTACGTAAGATCGGTCGAAAAGTGGCTAGGAGGCACACGCACACGTCGAGGTCGAGGTCCGTAGCGAGATCAGTTGCTAAGAGATTGGTTCATAAAAGGACCAAACTTCTAAGGAGTTTGGTTCCTGGGGGAGAGTTTATGAAGGATGAAGCTTTGTTGATTGATGAAGCCCTAGATTACATATCATTTCTTCGAGTTCAAGTTGATGGAATGCGGTTTCTTGCTAATTGCAAATGA

mRNA sequence

ATGAACTTCTTAGAGAGAAAAAACGCCATAAAAGCGGCCTCCGACTTGGCCATGGCTACAACGAGGAACGGAGCGACTCGTTGGAGTCGAGCCATCATTGCCAAATCCATACAAGCTCCACCTGAGGCCAAGCTTCGAAGGAAGACGATGCTACGTAAGATCGGTCGAAAAGTGGCTAGGAGGCACACGCACACGTCGAGGTCGAGGTCCGTAGCGAGATCAGTTGCTAAGAGATTGGTTCATAAAAGGACCAAACTTCTAAGGAGTTTGGTTCCTGGGGGAGAGTTTATGAAGGATGAAGCTTTGTTGATTGATGAAGCCCTAGATTACATATCATTTCTTCGAGTTCAAGTTGATGGAATGCGGTTTCTTGCTAATTGCAAATGA

Coding sequence (CDS)

ATGAACTTCTTAGAGAGAAAAAACGCCATAAAAGCGGCCTCCGACTTGGCCATGGCTACAACGAGGAACGGAGCGACTCGTTGGAGTCGAGCCATCATTGCCAAATCCATACAAGCTCCACCTGAGGCCAAGCTTCGAAGGAAGACGATGCTACGTAAGATCGGTCGAAAAGTGGCTAGGAGGCACACGCACACGTCGAGGTCGAGGTCCGTAGCGAGATCAGTTGCTAAGAGATTGGTTCATAAAAGGACCAAACTTCTAAGGAGTTTGGTTCCTGGGGGAGAGTTTATGAAGGATGAAGCTTTGTTGATTGATGAAGCCCTAGATTACATATCATTTCTTCGAGTTCAAGTTGATGGAATGCGGTTTCTTGCTAATTGCAAATGA

Protein sequence

MNFLERKNAIKAASDLAMATTRNGATRWSRAIIAKSIQAPPEAKLRRKTMLRKIGRKVARRHTHTSRSRSVARSVAKRLVHKRTKLLRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLANCK

Homology

[Close]

BLAST of Cp4.1LG07g08300 vs. TrEMBL
Match: A0A0A0LM92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G047790 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 9.3e-32
Identity = 86/148 (58.11%), Postives = 106/148 (71.62%), Query Frame = 1


Query: 1   MNFLERKNAIKAASDLAMATTRNGATRWSRAIIAKSIQ--APPEA-------------KL 60
           MNFL+RK AIK ++D AMA TR G T WS++IIAKS++  APP+A             K 
Sbjct: 30  MNFLDRKKAIKISADYAMAETRKGTTIWSQSIIAKSLKGHAPPKAILNRGTIYINLLRKK 89

Query: 61  RRKTMLRKIGRKVARRHTHTSR---SRSVARSVAKRLVHKRTKLLRSLVPGGEFMKDEAL 120
           R  T L+K+GRK+ RR    SR   S+ + R++AKRLV KRTK+LRSL+PGGEFM+DE L
Sbjct: 90  RTMTQLQKMGRKIGRRMARRSRLPSSKVLPRTIAKRLVEKRTKVLRSLIPGGEFMEDEVL 149

Query: 121 LIDEALDYISFLRVQVDGMRFLAN--CK 129
           LI+EALDYI FL+ QVDGMRFLAN  CK
Sbjct: 150 LIEEALDYIPFLQAQVDGMRFLANYYCK 177

[Close]

BLAST of Cp4.1LG07g08300 vs. TrEMBL
Match: M5Y9G3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012167mg PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.7e-20
Identity = 73/145 (50.34%), Postives = 91/145 (62.76%), Query Frame = 1


Query: 1   MNFLERKNAIKAASDLAMATTRNGATRWSRAIIAKSIQAP---------PEAKLRRKTML 60
           M  +ERK AIK ++D+AMA+TRNG T WSRA+IA S Q+          P    R  +M+
Sbjct: 30  MTIMERKKAIKMSADIAMASTRNGTTCWSRAVIANSTQSNRVVVERILGPHKPSRSVSMV 89

Query: 61  --RKIGRKVARRHTHTSRSRSV---------ARSVAKRLVHKRTKLLRSLVPGGEFMKDE 120
             +KI +K   R   +SRSR V          RS+AKRLV K+T++L+SLVPGGEFM+DE
Sbjct: 90  MHKKILKK--SRRVCSSRSRRVLMRKRDVAKTRSIAKRLVWKKTRVLKSLVPGGEFMEDE 149

Query: 121 ALLIDEALDYISFLRVQVDGMRFLA 126
             LI E LDYI  LR QVD MR LA
Sbjct: 150 MCLIAETLDYIVSLRAQVDVMRCLA 172

[Close]

BLAST of Cp4.1LG07g08300 vs. TrEMBL
Match: A0A0D2RBM6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G273100 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.9e-18
Identity = 62/130 (47.69%), Postives = 85/130 (65.38%), Query Frame = 1


Query: 1   MNFLERKNAIKAASDLAMATTRNGATRWSRAIIAKSIQAPPEAKLRRKTMLRKIGRKVAR 60
           M+  ERK AIK ++D AMA+ R G T WSRA+I+   +  P    R  +  +KI ++  R
Sbjct: 30  MSIFERKKAIKLSADTAMASARKGLTCWSRALISNPDRPVPTTTRRASSACKKIVKRSRR 89

Query: 61  -RHT---HTSRSRSVARSVAKRLVHKRTKLLRSLVPGGEFMKDEALLIDEALDYISFLRV 120
            R T     +R   + RS+A+ LV KRT++L+SL+PGGEFM +E  LI+E LDYI+ LRV
Sbjct: 90  IRRTAKCGAARKGQITRSIAQCLVRKRTQILKSLIPGGEFM-NEVCLIEETLDYITSLRV 149

Query: 121 QVDGMRFLAN 127
           QVD MR LA+
Sbjct: 150 QVDVMRSLAS 158

[Close]

BLAST of Cp4.1LG07g08300 vs. TrEMBL
Match: A0A067FGP7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030032mg PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.7e-18
Identity = 64/149 (42.95%), Postives = 87/149 (58.39%), Query Frame = 1


Query: 1   MNFLERKNAIKAASDLAMATTRNGATRWSRAIIAKSIQAPPEAKL--------------- 60
           M+  ERK AIK ++D+AMA+ RNG T WSRA+IA + +     KL               
Sbjct: 29  MSISERKKAIKLSADIAMASARNGRTSWSRALIASASKDDNHGKLFVQQILGSDCERLTK 88

Query: 61  --------RRKTMLRKIGRKVARRHTHTSRSRSVARSVAKRLVHKRTKLLRSLVPGGEFM 120
                   R K +L+K    + RR       ++VA S+AK++V+KRT++L+SLVPGG FM
Sbjct: 89  ISTSIKRLRCKKILKKSSGTIIRRRMKRIPDKAVASSIAKQMVNKRTQILKSLVPGGVFM 148

Query: 121 KDEALLIDEALDYISFLRVQVDGMRFLAN 127
            DE  LI+E LDYI  LR Q+D MR LA+
Sbjct: 149 -DEVSLIEETLDYILSLRAQIDVMRSLAD 176

[Close]

BLAST of Cp4.1LG07g08300 vs. TrEMBL
Match: V4UQX9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009640mg PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.7e-18
Identity = 64/149 (42.95%), Postives = 87/149 (58.39%), Query Frame = 1


Query: 1   MNFLERKNAIKAASDLAMATTRNGATRWSRAIIAKSIQAPPEAKL--------------- 60
           M+  ERK AIK ++D+AMA+ RNG T WSRA+IA + +     KL               
Sbjct: 29  MSISERKKAIKLSADIAMASARNGRTSWSRALIASASKDDNHGKLFVQQILGSDCERLTK 88

Query: 61  --------RRKTMLRKIGRKVARRHTHTSRSRSVARSVAKRLVHKRTKLLRSLVPGGEFM 120
                   R K +L+K    + RR       ++VA S+AK++V+KRT++L+SLVPGG FM
Sbjct: 89  ISTSIKRLRCKKILKKSSGTIIRRRMKRIPDKAVASSIAKQMVNKRTQILKSLVPGGVFM 148

Query: 121 KDEALLIDEALDYISFLRVQVDGMRFLAN 127
            DE  LI+E LDYI  LR Q+D MR LA+
Sbjct: 149 -DEVSLIEETLDYILSLRAQIDVMRSLAD 176

[Close]

BLAST of Cp4.1LG07g08300 vs. TAIR10
Match: AT5G57780.1 (AT5G57780.1 EXPRESSED IN: 18 plant structures)

HSP 1 Score: 94.7 bits (234), Expect = 4.3e-20
Identity = 62/126 (49.21%), Postives = 77/126 (61.11%), Query Frame = 1


Query: 1   MNFLERKNAIKAASDLAMATTRNGATRWSRAIIAKSIQAPPEAKLRRKTMLRKIGRKVAR 60
           +N  ERKNAI+ +SDLAMA  RNG+T WSRA+I++S       K   K M R+I +K   
Sbjct: 31  LNVTERKNAIRLSSDLAMAAARNGSTVWSRALISRSGN-----KTANKPMARRILKKARN 90

Query: 61  RHTHTSRS-RSVARSVAKRLVHKRTKLLRSLVPGGEFMKDEALLIDEALDYISFLRVQVD 120
           R  +     R      AK  V KRT LL+SLVPGGE + D+  LI E LDYI +LR QVD
Sbjct: 91  RMKNRCNILRRNGNFTAKTWVRKRTDLLKSLVPGGELIDDKDYLIRETLDYIVYLRAQVD 150

Query: 121 GMRFLA 126
            MR +A
Sbjct: 151 VMRTVA 151

[Close]

BLAST of Cp4.1LG07g08300 vs. TAIR10
Match: AT4G30410.2 (AT4G30410.2 sequence-specific DNA binding transcription factors)

HSP 1 Score: 80.9 bits (198), Expect = 6.4e-16
Identity = 59/142 (41.55%), Postives = 86/142 (60.56%), Query Frame = 1


Query: 5   ERKNAIKAASDLAMATTRNGATRWSRAIIAKS--------------IQAPP--EAKLRRK 64
           ERK AIK ++D+AMA+ R G T WSRA+I K+              I+A      KL +K
Sbjct: 33  ERKKAIKLSADVAMASLRKGTTCWSRALIEKTATEDNFLVRQMLSGIKAETLINKKLPKK 92

Query: 65  TML-RKI---GRKVARRHTHTSRSRSVARSVAKRLVHKRTKLLRSLVPGGEFMKDEALLI 124
           T+  RKI    +K+ RR + ++   + A+  AKRLV +RT+ LR++VPGGE M ++ LL+
Sbjct: 93  TVCHRKIVRRSKKILRRKSKSASEEAAAK--AKRLVKRRTQGLRNVVPGGELMSNDVLLL 152

Query: 125 DEALDYISFLRVQVDGMRFLAN 127
            E LDYI  L+ QV+ MR + +
Sbjct: 153 QETLDYIVSLQTQVNVMRSIVD 172

[Close]

BLAST of Cp4.1LG07g08300 vs. TAIR10
Match: AT1G09250.1 (AT1G09250.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 48.9 bits (115), Expect = 2.7e-06
Identity = 42/116 (36.21%), Postives = 59/116 (50.86%), Query Frame = 1


Query: 10  IKAASDLAMATTRNGATRWSRAIIAKSIQAPPEAKLRRKTMLRKIGRKVARRHTHTSRSR 69
           I+  +D  +A +  G TRWSRAI+A  ++A  + K  RK        K  +  T T+R +
Sbjct: 87  IRDTADRVLAASARGTTRWSRAILASRVRA--KLKKHRKAKKSTGNCKSRKGLTETNRIK 146

Query: 70  SVARSVAKRLVHKRTKLLRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLA 126
             A       V ++ K+L  LVPG   +    LL DEA DYI+ L +QV  M  LA
Sbjct: 147 LPA-------VERKLKILGRLVPGCRKVSVPNLL-DEATDYIAALEMQVRAMEALA 192

[Close]

BLAST of Cp4.1LG07g08300 vs. TAIR10
Match: AT3G06590.1 (AT3G06590.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 47.4 bits (111), Expect = 7.8e-06
Identity = 43/125 (34.40%), Postives = 66/125 (52.80%), Query Frame = 1


Query: 5   ERKNAIKAASDLAMATTRNGATRWSRAIIAKSIQAPPEAKLR-RKTMLRKIGRKVARRHT 64
           +R  A++ A+D A+A +  G T WSRAI+A  I+     + R R TM       V    +
Sbjct: 84  KRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSS 143

Query: 65  HTSRSR--SVARSVAKRL--VHKRTKLLRSLVPGGEFMKDEALLIDEALDYISFLRVQVD 124
           + SR R  SV R   K +  V+++ ++L  LVPG    +   ++++EA DYI  L +QV 
Sbjct: 144 NRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCG-KQSVPVILEEATDYIQALEMQVR 203

[Close]

BLAST of Cp4.1LG07g08300 vs. NCBI nr
Match: gi|659069899|ref|XP_008452339.1| (PREDICTED: transcription factor bHLH148 [Cucumis melo])

HSP 1 Score: 149.8 bits (377), Expect = 3.2e-33
Identity = 88/147 (59.86%), Postives = 108/147 (73.47%), Query Frame = 1


Query: 1   MNFLERKNAIKAASDLAMATTRNGATRWSRAIIAKSIQ--APPEAKLRRKT--------- 60
           MNFL+RK AIK ++D AMA TRNG T WS++IIAK ++  APPEA L R+T         
Sbjct: 29  MNFLDRKKAIKISADYAMAATRNGTTIWSQSIIAKYLKGHAPPEAILNRRTSYINLLRKK 88

Query: 61  ----MLRKIGRKVARRHTHTSR---SRSVARSVAKRLVHKRTKLLRSLVPGGEFMKDEAL 120
                LRK+GRK+ R+    SR   S+++  ++AKRLV KRTK+LRSL+PGGEFMKDEAL
Sbjct: 89  RTMTQLRKMGRKIGRKMARRSRLPLSKALPSTIAKRLVEKRTKVLRSLIPGGEFMKDEAL 148

Query: 121 LIDEALDYISFLRVQVDGMRFLAN-CK 129
           LI+EALDYI FL+ QVDGMRFLAN CK
Sbjct: 149 LIEEALDYIPFLQAQVDGMRFLANYCK 175

[Close]

BLAST of Cp4.1LG07g08300 vs. NCBI nr
Match: gi|449462743|ref|XP_004149100.1| (PREDICTED: uncharacterized protein LOC101216909 [Cucumis sativus])

HSP 1 Score: 144.4 bits (363), Expect = 1.3e-31
Identity = 86/148 (58.11%), Postives = 106/148 (71.62%), Query Frame = 1


Query: 1   MNFLERKNAIKAASDLAMATTRNGATRWSRAIIAKSIQ--APPEA-------------KL 60
           MNFL+RK AIK ++D AMA TR G T WS++IIAKS++  APP+A             K 
Sbjct: 30  MNFLDRKKAIKISADYAMAETRKGTTIWSQSIIAKSLKGHAPPKAILNRGTIYINLLRKK 89

Query: 61  RRKTMLRKIGRKVARRHTHTSR---SRSVARSVAKRLVHKRTKLLRSLVPGGEFMKDEAL 120
           R  T L+K+GRK+ RR    SR   S+ + R++AKRLV KRTK+LRSL+PGGEFM+DE L
Sbjct: 90  RTMTQLQKMGRKIGRRMARRSRLPSSKVLPRTIAKRLVEKRTKVLRSLIPGGEFMEDEVL 149

Query: 121 LIDEALDYISFLRVQVDGMRFLAN--CK 129
           LI+EALDYI FL+ QVDGMRFLAN  CK
Sbjct: 150 LIEEALDYIPFLQAQVDGMRFLANYYCK 177

[Close]

BLAST of Cp4.1LG07g08300 vs. NCBI nr
Match: gi|596298638|ref|XP_007227526.1| (hypothetical protein PRUPE_ppa012167mg [Prunus persica])

HSP 1 Score: 105.9 bits (263), Expect = 5.3e-20
Identity = 73/145 (50.34%), Postives = 91/145 (62.76%), Query Frame = 1


Query: 1   MNFLERKNAIKAASDLAMATTRNGATRWSRAIIAKSIQAP---------PEAKLRRKTML 60
           M  +ERK AIK ++D+AMA+TRNG T WSRA+IA S Q+          P    R  +M+
Sbjct: 30  MTIMERKKAIKMSADIAMASTRNGTTCWSRAVIANSTQSNRVVVERILGPHKPSRSVSMV 89

Query: 61  --RKIGRKVARRHTHTSRSRSV---------ARSVAKRLVHKRTKLLRSLVPGGEFMKDE 120
             +KI +K   R   +SRSR V          RS+AKRLV K+T++L+SLVPGGEFM+DE
Sbjct: 90  MHKKILKK--SRRVCSSRSRRVLMRKRDVAKTRSIAKRLVWKKTRVLKSLVPGGEFMEDE 149

Query: 121 ALLIDEALDYISFLRVQVDGMRFLA 126
             LI E LDYI  LR QVD MR LA
Sbjct: 150 MCLIAETLDYIVSLRAQVDVMRCLA 172

[Close]

BLAST of Cp4.1LG07g08300 vs. NCBI nr
Match: gi|645233892|ref|XP_008223559.1| (PREDICTED: transcription factor bHLH149 [Prunus mume])

HSP 1 Score: 104.4 bits (259), Expect = 1.5e-19
Identity = 70/144 (48.61%), Postives = 91/144 (63.19%), Query Frame = 1


Query: 1   MNFLERKNAIKAASDLAMATTRNGATRWSRAIIAKSIQA----------PPEAKLRRKTM 60
           M  LERK AIK ++D+AMA+TRNG T WSRA+IA + ++          P ++     ++
Sbjct: 30  MTILERKKAIKMSADIAMASTRNGTTCWSRAVIANATESNRVVVERILGPHKSSRSVSSV 89

Query: 61  LRKIGRKVARRHTHTSRSRSV---------ARSVAKRLVHKRTKLLRSLVPGGEFMKDEA 120
           + K   K +RR   +SRSR V          RS+AKRLV K+T++L+SLVPGGEFM+DE 
Sbjct: 90  MHKKILKKSRR-VCSSRSRRVLMRKRDVEKTRSIAKRLVWKKTQVLKSLVPGGEFMEDEM 149

Query: 121 LLIDEALDYISFLRVQVDGMRFLA 126
            LI E LDYI  LR QVD MR LA
Sbjct: 150 CLIAETLDYIVSLRAQVDVMRCLA 172

[Close]

BLAST of Cp4.1LG07g08300 vs. NCBI nr
Match: gi|823154411|ref|XP_012477080.1| (PREDICTED: transcription factor bHLH147 [Gossypium raimondii])

HSP 1 Score: 98.6 bits (244), Expect = 8.4e-18
Identity = 62/130 (47.69%), Postives = 85/130 (65.38%), Query Frame = 1


Query: 1   MNFLERKNAIKAASDLAMATTRNGATRWSRAIIAKSIQAPPEAKLRRKTMLRKIGRKVAR 60
           M+  ERK AIK ++D AMA+ R G T WSRA+I+   +  P    R  +  +KI ++  R
Sbjct: 30  MSIFERKKAIKLSADTAMASARKGLTCWSRALISNPDRPVPTTTRRASSACKKIVKRSRR 89

Query: 61  -RHT---HTSRSRSVARSVAKRLVHKRTKLLRSLVPGGEFMKDEALLIDEALDYISFLRV 120
            R T     +R   + RS+A+ LV KRT++L+SL+PGGEFM +E  LI+E LDYI+ LRV
Sbjct: 90  IRRTAKCGAARKGQITRSIAQCLVRKRTQILKSLIPGGEFM-NEVCLIEETLDYITSLRV 149

Query: 121 QVDGMRFLAN 127
           QVD MR LA+
Sbjct: 150 QVDVMRSLAS 158

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g08300 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG07g08300 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM92_CUCSA	9.3e-32	58.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G047790 PE=4 SV=1	[more]
M5Y9G3_PRUPE	3.7e-20	50.34	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012167mg PE=4 SV=1	[more]
A0A0D2RBM6_GOSRA	5.9e-18	47.69	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G273100 PE=4 SV=1	[more]
A0A067FGP7_CITSI	7.7e-18	42.95	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030032mg PE=4 SV=1	[more]
V4UQX9_9ROSI	7.7e-18	42.95	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009640mg PE=4 SV=1	[more]

BLAST of Cp4.1LG07g08300 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G57780.1	4.3e-20	49.21	EXPRESSED IN: 18 plant structures	[more]
AT4G30410.2	6.4e-16	41.55	sequence-specific DNA binding transcription factors	[more]
AT1G09250.1	2.7e-06	36.21	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G06590.1	7.8e-06	34.40	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of Cp4.1LG07g08300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659069899\|ref\|XP_008452339.1\|	3.2e-33	59.86	PREDICTED: transcription factor bHLH148 [Cucumis melo]	[more]
gi\|449462743\|ref\|XP_004149100.1\|	1.3e-31	58.11	PREDICTED: uncharacterized protein LOC101216909 [Cucumis sativus]	[more]
gi\|596298638\|ref\|XP_007227526.1\|	5.3e-20	50.34	hypothetical protein PRUPE_ppa012167mg [Prunus persica]	[more]
gi\|645233892\|ref\|XP_008223559.1\|	1.5e-19	48.61	PREDICTED: transcription factor bHLH149 [Prunus mume]	[more]
gi\|823154411\|ref\|XP_012477080.1\|	8.4e-18	47.69	PREDICTED: transcription factor bHLH147 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g08300.1	Cp4.1LG07g08300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33124	FAMILY NOT NAMED	coord: 1..126 score: 1.8
None	No IPR available	PANTHER	PTHR33124:SF5	BHLH TRANSCRIPTION FACTOR	coord: 1..126 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG07g08300	Cucsa.089810	Cucumber (Gy14) v1	cgycpeB0180
Cp4.1LG07g08300	CmaCh12G009950	Cucurbita maxima (Rimu)	cmacpeB203
Cp4.1LG07g08300	CmoCh12G010050	Cucurbita moschata (Rifu)	cmocpeB175
Cp4.1LG07g08300	Cla022864	Watermelon (97103) v1	cpewmB816
Cp4.1LG07g08300	Csa2G047790	Cucumber (Chinese Long) v2	cpecuB815
Cp4.1LG07g08300	MELO3C004096	Melon (DHL92) v3.5.1	cpemeB779
Cp4.1LG07g08300	ClCG11G012600	Watermelon (Charleston Gray)	cpewcgB725
Cp4.1LG07g08300	CSPI02G05530	Wild cucumber (PI 183967)	cpecpiB816
Cp4.1LG07g08300	Lsi11G007180	Bottle gourd (USVL1VR-Ls)	cpelsiB656
Cp4.1LG07g08300	MELO3C004096.2	Melon (DHL92) v3.6.1	cpemedB915
Cp4.1LG07g08300	CsaV3_2G007890	Cucumber (Chinese Long) v3	cpecucB1009
Cp4.1LG07g08300	Bhi06G001184	Wax gourd	cpewgoB1021
Cp4.1LG07g08300	CsGy2G005670	Cucumber (Gy14) v2	cgybcpeB265
Cp4.1LG07g08300	Carg23477	Silver-seed gourd	carcpeB0676

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None