Cp4.1LG07g07040 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG07g07040
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ubiquitin-like protein
Location	Cp4.1LG07 : 5882904 .. 5887281 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGTTACGCCGAACCAGTGTGGGATTAGTCCAACCGCGTTTCCAAACACTACCAAAAAAAAGTTGTGCAAAGCGCTTGCCTTCCTCCCCTTTCATCTCATCGCGACTGAACTCTCTCTCTCAGGCAAGAGACTTCTCGCGGATTTCCAGGTTAGAATTCGAAGCAATCGAGTCCCGAATCAACAATCAAAGTTCCGAGAATTCGCATATTTCAATTTTTTCTGGAAGCAAAATAGTTGATTCTGTTTTGTGAGAACTGTATGATTAGTTAGCGTATAATCGATTTTAGGGAATTTCGTTTGTATTACCCATACTTCGATGAATTTCCGAACTGTGAAATTCAAGATTATGTGGAGAATTGATGAACGTTGTTTGTGAATGAGCGGAATTCAAGTTCTGTATTGATTTGTTACTGGCATTATGTTATTTAGACACTGTTAATTTCTCATTGATCATATGAGTAGTTTGTAACTTCATGAACAAGATGATAATCTGTCATAGATGTTTTCTTATAAAATTTTCCATGTGATGAGTTGGATGCATGTTTGTGAGTTTCAGACTGCGGCGGTGGAGGCTGGATTTTTTGAAGTGTTGATCCATTATTTATTGTTTCAAGATGGTGAGTAGTTCATATCTCTCTCTATCTTTGTTTGAATTTAAGTGATTCATACCTTAAAAGATGAACTTGTTCCCATCCAATAGTCAAGAATTCTTGACGGTATGAGGTGGAACAATATGTTCTTCCTGAATACCTGGATTCGGTGCCAAAGAATTCCAAAGAATTTCCTGTTGCTACCATATAGTATTCATCTTGACTTGGGTATTCGGTGCCAAAGAATTCCAAAGAATTTCCTGTTGCTACCATATAGTATTCATCTTGACTTGGTGATAAATAAAACATCCACACTTCTTTTTATCTCTCAGAAATTTCATAAAATGGAGTTTCTAGAGATCCCCAATGAACAATCCTTGCACAATGCTTTTATTGTAATTTCTCTGATTTAACTTGTTTAGTTTACAAGCACGGAAAACTCGAAGAAGGCCTGTCATAAAATTTGTGCTTTTATCTGAAGTATACTTTTTTTTCCGGAGCCTGTGCTGAATAATTTTCAGTTACTACTATCTTGTTGAATTTACCTTCTAATTACGTCCTACTGTTTCCATATATTTCTATGTAATTCTCTGTTTGTTCTAAACTATGTCATAAATTCAAGGTGAAATTATTTGCCTAGTAAACAGTAGAACAAAGGCGTTAACACTTGGTTTAAGAGTGGCCAGTTTGATAGTCGAATGAGAAACTTACTGTCAGCAATGTACAGGGTCATGTGGTGGAGATCATCTGTTATAATGTTTCTAGTAAGTCAGTGGCAAATATACTTAGTCAGTATGAGGGTGGAAATTCTTTCAAAGTAGGATTCATTTTACTCCAGTTAACGAAGAGTTCGATTTTCTTGAAAGATCAAACATTCTTCAGAACTTTCTTTAATGAGAAGTACAGGCCTTTTTGTGATATATACAGTTCAAAGTTTCTAGTTGTAGTGCTTTATGCAGTGATCTTTGCTATCACTCAACTTCTTTGATCAATTTAGACCGGGTGTGTTTTTTTGTTAGGAACCACGAATCTCCTATTGGACAATGTAGTGCTTTATGCAGTGATCTTTGCTATCACTCAACTTCTTTGATCAATTTAGACCGGGTGTGCTTTTTTTGTTAGGAATCACGAATCTCCACACTAGTATGATATTGTCCACTCTGAGCCTAAGTTCTTATGGCTTTGCTTTTGGTTTCCCCAAAAGAGCTCATACCAATAGAGATGTATTCGTTACTCATAAACCCATGATCATCCCCTTAATCAGCGAATGCGGTTCTCCCTCCCCATAATCCTCAACAATCCTCCCCTCGAACAAAGTATACCATAGAGCCTCCCCTAAGGCCTATGGAGCCCTTGAATAGCCTCCCTTTAATCGAGGCTCGACTCCTTCTCTGGAGCCCTCGAACAAAGTACACCCTTTGTTCGACACTTGAGTCACTTTTGACTACACCATCGAGACCCACAATTTCTTTATTTAATACTTGAAGATTCTATTGACATGGCTAAGTTAAGGGCATGACTTATGTTAGGAATCACGAATCTCCACAATGGTATGATATTGTCCACTCTGAGCATAAGCTCTCATGACTTTGTTTTTGGTTTCTCCAAAAGATCTCATACCAAAAGAGATGTATTCCTTACTTATAAACTCATGATCATCCCCTTAATTAGCCAATGTGGGATTCCCTCCCTGTAATCCTCAACATTTTATAATCTCCTTCGGCAATAGAACTCTCGTCTCCCTGGCCTTTGGTTTGTTTGATTAAATGCTGTGAAATCAAATCTTGTCTCAAGAAACCTACAAAGGATATTGGGAAGATGTGGTGTTTAGATTCTATTAATTGCCAACACTTTTTTCTGACTGATATTCTATTTCTCAAATTGGTTTCTTTGGTTTGTCTCTTCTCTTGGCTTTGACACATTTATATTTTCTCTCACTTCATTCTTCTTCATCTGTTGAGTTATGGGATCAGTTCTACGTTTGTTTGCATTTGGTAAGCTTTGTGCATGTTATTTTATTTGTTCATTAGTTTTTATTGCATCATATCAAACCAAAATAAGTAAATTCGGTTCTCTGTCTCTCTCTTTTTTCAAATAAGATACAGAGAGGGTGTTATAAAATACCAAAAAAAAAAAAAAAAAAAANTTTTTGTTAAAAATACATACCATATGGACCTGAGTACTAACAACTTCAATTGATTCACAATTTCCAATTGACTGTGACTTTTCAGTATGTTTGTTATGCCATATTTATGTATAGGCCATGTATATCCGAATCAAGCGCCATAAGACAACCTACTTTATCCAGTGCGATCCAATTGAGACAACTTTAAACATCAAGCAAAAATTAGAGTCCCTTATTGATCAGCCAATTGTTGATCAGCGCTTGATCTTGGTGGGAAGCGGGGAAGTATTGGAGGATTCAAAGACACTGGCCGATCAGAAGGTATGCCTTAAATTCATAAATTTACTACATTTGGTCATCAAGCATCGGATATTCTGGAAATATTAAGGTGAAGACAATACGACAGCTGCGGCTCTAACTAATATTTGCTATGTATTTCCAGGTTGAAAATGATGCAGTTGTGGCTCTAACGTTGCGAAAAGGTTTTCTTCTACCCACCCCAACATTTTTTTTTTTGTGAACTTCTTACACGTTTTCTGCTTAGGGACTGAATTATTTGAGGGTGGATTTTTTCATAGTCATGCTCAAATTACAGGTCTCAGTCCTTTAACTTTTAAGCTTATGTCTTAATAAGTCATTCAACTTTCAATAGGTTACTGAACTTCAAAAGTATCGAATAAATCTCTAAATTTTCAATTTTGCATTTAATAAGTTCCATCCCAACAATTTTGTGAACTTCTGACGAGTTTTTAAAAGTATATTTTCTGATTAGGGACTGAATTAGTTGTGAGCGTAGACTTTTTCATAGTTATGATCTTGCTTAAATTTCAGGTTTTAGTTTTTGAACAACCTTTTTTTAGTTTTTGAACAACCTTCCATTTTATGTCTAATAGGTTGCTGAACTTGAAAAGTGTCGTTTTCCTCAAACTTTCAATTTTGTGTTAGTAAGCTTGAAAATTTTAGAACATCTCGATTAAGTCAAAGAACTATTAGACGCAACATTAAAAATTTAGTGACCTATTAGAAGCATTCAATTTTAGAATGTATTAGGCGTTCTTTAAAGCTCAAAGAATTATCATACACAAAATTGAAAGTTGATTGATCTACATTAGTTCATAGACTAAATATGAAACTTATGATCTTCTTTGTTGGATTTGGATTTAAAATATGGAACTCTGTCTCATCACGCATTTTCTTGATCACTTTCCCTTCTTTGTGTAGATGATAATGAGTTCGAGGAGATCGACATTGTCAGTACAAACGATTTCTACCAATCTCGTGAAGCCGATTCTGGGAATTGGTAAGGACCGAAAGTTTTCTTCTACTATGTGTGGTAGTTTATGATGTTCAGCCATCAAGCTTGTGGTGTATTATTGAAATAACTGTTCTATCAGTTGGATGGAATTGAAAATGATGCATAAGAAAGTAGACTTCATGCAGGATTAGATATCGTAACTCCATGCATTCTCTTTGTTCAGTTGCATTGCTGATTGAACTCATTCATGCATTGCTACAAGTTCTATAATATATATGAGTTGAGAATTTTGTTAGGACCTTTTTAATTTCCTTTAAACTATATGAATTTGGTTTTTATTTGACTCTCTTTCTTATTCATATGATCTTCACTGTGGTGCTGGTTTCAAAATACTGAAATAAATGTG

mRNA sequence

GATGTTACGCCGAACCAGTGTGGGATTAGTCCAACCGCGTTTCCAAACACTACCAAAAAAAAGTTGTGCAAAGCGCTTGCCTTCCTCCCCTTTCATCTCATCGCGACTGAACTCTCTCTCTCAGGCAAGAGACTTCTCGCGGATTTCCAGGCCATGTATATCCGAATCAAGCGCCATAAGACAACCTACTTTATCCAGTGCGATCCAATTGAGACAACTTTAAACATCAAGCAAAAATTAGAGTCCCTTATTGATCAGCCAATTGTTGATCAGCGCTTGATCTTGGTGGGAAGCGGGGAAGTATTGGAGGATTCAAAGACACTGGCCGATCAGAAGGTTGAAAATGATGCAGTTGTGGCTCTAACGTTGCGAAAAGATGATAATGAGTTCGAGGAGATCGACATTGTCAGTACAAACGATTTCTACCAATCTCGTGAAGCCGATTCTGGGAATTGGTAAGGACCGAAAGTTTTCTTCTACTATGTGTGGTAGTTTATGATGTTCAGCCATCAAGCTTGTGGTGTATTATTGAAATAACTGTTCTATCAGTTGGATGGAATTGAAAATGATGCATAAGAAAGTAGACTTCATGCAGGATTAGATATCGTAACTCCATGCATTCTCTTTGTTCAGTTGCATTGCTGATTGAACTCATTCATGCATTGCTACAAGTTCTATAATATATATGAGTTGAGAATTTTGTTAGGACCTTTTTAATTTCCTTTAAACTATATGAATTTGGTTTTTATTTGACTCTCTTTCTTATTCATATGATCTTCACTGTGGTGCTGGTTTCAAAATACTGAAATAAATGTG

Coding sequence (CDS)

GATGTTACGCCGAACCAGTGTGGGATTAGTCCAACCGCGTTTCCAAACACTACCAAAAAAAAGTTGTGCAAAGCGCTTGCCTTCCTCCCCTTTCATCTCATCGCGACTGAACTCTCTCTCTCAGGCAAGAGACTTCTCGCGGATTTCCAGGCCATGTATATCCGAATCAAGCGCCATAAGACAACCTACTTTATCCAGTGCGATCCAATTGAGACAACTTTAAACATCAAGCAAAAATTAGAGTCCCTTATTGATCAGCCAATTGTTGATCAGCGCTTGATCTTGGTGGGAAGCGGGGAAGTATTGGAGGATTCAAAGACACTGGCCGATCAGAAGGTTGAAAATGATGCAGTTGTGGCTCTAACGTTGCGAAAAGATGATAATGAGTTCGAGGAGATCGACATTGTCAGTACAAACGATTTCTACCAATCTCGTGAAGCCGATTCTGGGAATTGGTAA

Protein sequence

DVTPNQCGISPTAFPNTTKKKLCKALAFLPFHLIATELSLSGKRLLADFQAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGNW

Homology

[Close]

BLAST of Cp4.1LG07g07040 vs. TrEMBL
Match: A0A061GWI4_THECC (Ubiquitin-like superfamily protein OS=Theobroma cacao GN=TCM_038415 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 6.5e-40
Identity = 84/102 (82.35%), Postives = 94/102 (92.16%), Query Frame = 1


Query: 51  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLAD 110
           AMYIR+KR KTTYFIQCDP ET L+IKQKL +LIDQP+ DQRLILV +GE+LEDSKTLAD
Sbjct: 2   AMYIRVKRSKTTYFIQCDPTETALDIKQKLHTLIDQPVNDQRLILVNTGEILEDSKTLAD 61

Query: 111 QKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGNW 153
           QKVENDAVVALTLRKDDNEFE+++IV  NDFYQSR+ADSGNW
Sbjct: 62  QKVENDAVVALTLRKDDNEFEDVNIVQPNDFYQSRDADSGNW 103

[Close]

BLAST of Cp4.1LG07g07040 vs. TrEMBL
Match: Q8VWY0_CUCSA (Ubiquitin-like protein OS=Cucumis sativus GN=UBI-1 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 8.4e-40
Identity = 87/94 (92.55%), Postives = 92/94 (97.87%), Query Frame = 1


Query: 51  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLAD 110
           AMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLIL+GSGEVLEDSKTLAD
Sbjct: 2   AMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLAD 61

Query: 111 QKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQS 145
           QKVENDAVVALTLRKDDN+FEEI+IV  +DFYQS
Sbjct: 62  QKVENDAVVALTLRKDDNDFEEINIVHPDDFYQS 95

[Close]

BLAST of Cp4.1LG07g07040 vs. TrEMBL
Match: A0A0D2P401_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G273700 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.5e-39
Identity = 82/102 (80.39%), Postives = 94/102 (92.16%), Query Frame = 1


Query: 51  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLAD 110
           AMYIR+KR KTTYFIQCDP ETTL+IKQKL +LIDQP+ DQRLIL+ +G++LEDSKTLAD
Sbjct: 2   AMYIRVKRSKTTYFIQCDPTETTLDIKQKLHTLIDQPVNDQRLILMSNGDILEDSKTLAD 61

Query: 111 QKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGNW 153
           QKVENDAVVALTLRKDDNEFE+++IV  NDFYQSR+ DSGNW
Sbjct: 62  QKVENDAVVALTLRKDDNEFEDVNIVKPNDFYQSRDTDSGNW 103

[Close]

BLAST of Cp4.1LG07g07040 vs. TrEMBL
Match: A0A0B0NRY4_GOSAR (Ubiquitin-like protein OS=Gossypium arboreum GN=F383_05925 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.5e-39
Identity = 82/102 (80.39%), Postives = 94/102 (92.16%), Query Frame = 1


Query: 51  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLAD 110
           AMYIR+KR KTTYFIQCDP ETTL+IKQKL +LIDQP+ DQRLIL+ +G++LEDSKTLAD
Sbjct: 2   AMYIRVKRSKTTYFIQCDPTETTLDIKQKLHTLIDQPVNDQRLILMNTGDILEDSKTLAD 61

Query: 111 QKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGNW 153
           QKVENDAVVALTLRKDDNEFE+++IV  NDFYQSR+ DSGNW
Sbjct: 62  QKVENDAVVALTLRKDDNEFEDVNIVKPNDFYQSRDTDSGNW 103

[Close]

BLAST of Cp4.1LG07g07040 vs. TrEMBL
Match: V4U1V8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009995mg PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.2e-38
Identity = 82/102 (80.39%), Postives = 94/102 (92.16%), Query Frame = 1


Query: 51  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLAD 110
           AMYIR+KR KTTYFI CDP ET L+IKQKL +LIDQPI DQRLILVG+G+VLEDSKTLAD
Sbjct: 2   AMYIRVKRSKTTYFIHCDPTETILDIKQKLHALIDQPINDQRLILVGTGDVLEDSKTLAD 61

Query: 111 QKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGNW 153
           QKVENDAV+ALTLRKDDN+FE+++IV  NDFYQSR+AD+GNW
Sbjct: 62  QKVENDAVLALTLRKDDNQFEDVNIVRPNDFYQSRDADAGNW 103

[Close]

BLAST of Cp4.1LG07g07040 vs. TAIR10
Match: AT5G57860.1 (AT5G57860.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 132.9 bits (333), Expect = 1.7e-31
Identity = 65/91 (71.43%), Postives = 80/91 (87.91%), Query Frame = 1


Query: 51  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLAD 110
           AMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QP+ +QRL+L+ + EVLEDSK+LAD
Sbjct: 2   AMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLAD 61

Query: 111 QKVENDAVVALTLRKDDNEFEEIDIVSTNDF 142
           QKVENDAVVALTL+KDDNEFE+++I    DF
Sbjct: 62  QKVENDAVVALTLKKDDNEFEDVNIAQPTDF 92

[Close]

BLAST of Cp4.1LG07g07040 vs. NCBI nr
Match: gi|659069945|ref|XP_008452565.1| (PREDICTED: transcription elongation factor B polypeptide 2 isoform X1 [Cucumis melo])

HSP 1 Score: 188.3 bits (477), Expect = 9.6e-45
Identity = 94/102 (92.16%), Postives = 100/102 (98.04%), Query Frame = 1


Query: 51  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLAD 110
           AMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLIL+GSGEVLEDSKTLAD
Sbjct: 2   AMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLAD 61

Query: 111 QKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGNW 153
           QKVENDAVVALTLRK+DN+FEEI+IV  NDFYQSR+ADSGNW
Sbjct: 62  QKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADSGNW 103

[Close]

BLAST of Cp4.1LG07g07040 vs. NCBI nr
Match: gi|659069947|ref|XP_008452573.1| (PREDICTED: transcription elongation factor B polypeptide 2 isoform X2 [Cucumis melo])

HSP 1 Score: 186.8 bits (473), Expect = 2.8e-44
Identity = 93/101 (92.08%), Postives = 99/101 (98.02%), Query Frame = 1


Query: 52  MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQ 111
           MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLIL+GSGEVLEDSKTLADQ
Sbjct: 1   MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQ 60

Query: 112 KVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGNW 153
           KVENDAVVALTLRK+DN+FEEI+IV  NDFYQSR+ADSGNW
Sbjct: 61  KVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADSGNW 101

[Close]

BLAST of Cp4.1LG07g07040 vs. NCBI nr
Match: gi|590579738|ref|XP_007013870.1| (Ubiquitin-like superfamily protein [Theobroma cacao])

HSP 1 Score: 171.8 bits (434), Expect = 9.3e-40
Identity = 84/102 (82.35%), Postives = 94/102 (92.16%), Query Frame = 1


Query: 51  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLAD 110
           AMYIR+KR KTTYFIQCDP ET L+IKQKL +LIDQP+ DQRLILV +GE+LEDSKTLAD
Sbjct: 2   AMYIRVKRSKTTYFIQCDPTETALDIKQKLHTLIDQPVNDQRLILVNTGEILEDSKTLAD 61

Query: 111 QKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGNW 153
           QKVENDAVVALTLRKDDNEFE+++IV  NDFYQSR+ADSGNW
Sbjct: 62  QKVENDAVVALTLRKDDNEFEDVNIVQPNDFYQSRDADSGNW 103

[Close]

BLAST of Cp4.1LG07g07040 vs. NCBI nr
Match: gi|525506935|ref|NP_001267513.1| (transcription elongation factor B polypeptide 2-like [Cucumis sativus])

HSP 1 Score: 171.4 bits (433), Expect = 1.2e-39
Identity = 87/94 (92.55%), Postives = 92/94 (97.87%), Query Frame = 1


Query: 51  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLAD 110
           AMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLIL+GSGEVLEDSKTLAD
Sbjct: 2   AMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLAD 61

Query: 111 QKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQS 145
           QKVENDAVVALTLRKDDN+FEEI+IV  +DFYQS
Sbjct: 62  QKVENDAVVALTLRKDDNDFEEINIVHPDDFYQS 95

[Close]

BLAST of Cp4.1LG07g07040 vs. NCBI nr
Match: gi|823154420|ref|XP_012477084.1| (PREDICTED: uncharacterized protein LOC105792831 isoform X1 [Gossypium raimondii])

HSP 1 Score: 169.9 bits (429), Expect = 3.5e-39
Identity = 82/102 (80.39%), Postives = 94/102 (92.16%), Query Frame = 1


Query: 51  AMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLAD 110
           AMYIR+KR KTTYFIQCDP ETTL+IKQKL +LIDQP+ DQRLIL+ +G++LEDSKTLAD
Sbjct: 2   AMYIRVKRSKTTYFIQCDPTETTLDIKQKLHTLIDQPVNDQRLILMSNGDILEDSKTLAD 61

Query: 111 QKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGNW 153
           QKVENDAVVALTLRKDDNEFE+++IV  NDFYQSR+ DSGNW
Sbjct: 62  QKVENDAVVALTLRKDDNEFEDVNIVKPNDFYQSRDTDSGNW 103

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g07040 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG07g07040 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061GWI4_THECC	6.5e-40	82.35	Ubiquitin-like superfamily protein OS=Theobroma cacao GN=TCM_038415 PE=4 SV=1	[more]
Q8VWY0_CUCSA	8.4e-40	92.55	Ubiquitin-like protein OS=Cucumis sativus GN=UBI-1 PE=2 SV=1	[more]
A0A0D2P401_GOSRA	2.5e-39	80.39	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G273700 PE=4 SV=1	[more]
A0A0B0NRY4_GOSAR	2.5e-39	80.39	Ubiquitin-like protein OS=Gossypium arboreum GN=F383_05925 PE=4 SV=1	[more]
V4U1V8_9ROSI	1.2e-38	80.39	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009995mg PE=4 SV=1	[more]

BLAST of Cp4.1LG07g07040 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G57860.1	1.7e-31	71.43	Ubiquitin-like superfamily protein	[more]

BLAST of Cp4.1LG07g07040 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659069945\|ref\|XP_008452565.1\|	9.6e-45	92.16	PREDICTED: transcription elongation factor B polypeptide 2 isoform X1 [Cucumis m...	[more]
gi\|659069947\|ref\|XP_008452573.1\|	2.8e-44	92.08	PREDICTED: transcription elongation factor B polypeptide 2 isoform X2 [Cucumis m...	[more]
gi\|590579738\|ref\|XP_007013870.1\|	9.3e-40	82.35	Ubiquitin-like superfamily protein [Theobroma cacao]	[more]
gi\|525506935\|ref\|NP_001267513.1\|	1.2e-39	92.55	transcription elongation factor B polypeptide 2-like [Cucumis sativus]	[more]
gi\|823154420\|ref\|XP_012477084.1\|	3.5e-39	80.39	PREDICTED: uncharacterized protein LOC105792831 isoform X1 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR000626	Ubiquitin_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g07040.1	Cp4.1LG07g07040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin domain	PFAM	PF00240	ubiquitin	coord: 54..125 score: 2.
IPR000626	Ubiquitin domain	SMART	SM00213	ubq_7	coord: 52..124 score: 7.
IPR000626	Ubiquitin domain	PROFILE	PS50053	UBIQUITIN_2	coord: 52..128 score: 14
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 50..129 score: 7.2
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 54..124 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG07g07040	Cucsa.090040	Cucumber (Gy14) v1	cgycpeB0178
Cp4.1LG07g07040	CmaCh12G008460	Cucurbita maxima (Rimu)	cmacpeB203
Cp4.1LG07g07040	CmoCh12G008490	Cucurbita moschata (Rifu)	cmocpeB175
Cp4.1LG07g07040	Cla020027	Watermelon (97103) v1	cpewmB807
Cp4.1LG07g07040	Csa2G036600	Cucumber (Chinese Long) v2	cpecuB823
Cp4.1LG07g07040	MELO3C004120	Melon (DHL92) v3.5.1	cpemeB773
Cp4.1LG07g07040	ClCG02G014340	Watermelon (Charleston Gray)	cpewcgB734
Cp4.1LG07g07040	CSPI02G05310	Wild cucumber (PI 183967)	cpecpiB824
Cp4.1LG07g07040	Lsi11G006950	Bottle gourd (USVL1VR-Ls)	cpelsiB661
Cp4.1LG07g07040	MELO3C004120.2	Melon (DHL92) v3.6.1	cpemedB909
Cp4.1LG07g07040	CsaV3_2G007660	Cucumber (Chinese Long) v3	cpecucB1017
Cp4.1LG07g07040	Bhi06G001213	Wax gourd	cpewgoB1007
Cp4.1LG07g07040	CsGy2G005440	Cucumber (Gy14) v2	cgybcpeB274
Cp4.1LG07g07040	Carg16425	Silver-seed gourd	carcpeB1263

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG07g07040	Silver-seed gourd	carcpeB0806
Cp4.1LG07g07040	Cucurbita pepo (Zucchini)	cpecpeB143
Cp4.1LG07g07040	Cucurbita pepo (Zucchini)	cpecpeB499
Cp4.1LG07g07040	Cucurbita maxima (Rimu)	cmacpeB163
Cp4.1LG07g07040	Cucurbita maxima (Rimu)	cmacpeB795
Cp4.1LG07g07040	Cucurbita moschata (Rifu)	cmocpeB748
Cp4.1LG07g07040	Melon (DHL92) v3.5.1	cpemeB752