Cp4.1LG07g05630 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG07g05630
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	F-box protein
Location	Cp4.1LG07 : 4203757 .. 4204497 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATGGGAAATTTTGAATCTAGTTTTTCCGTTGTTGGAAGACGTGGACCTTGGTTCATGCATGGCAGTATCCAGAGAGTGGAGAGACGCAGCTCGAGATGATTACTTTTGGAAATGCTTGTGCATTAAGAGGTGGCCTTCAACTTACAAAATGTCTAATTTTCCGACGGGGACATACTATAAACTATATCGAAATTCTTACCAATGTTCCAATAGTCGACGTCTTCTCTCTCCTCGACTTTCGTTTGATGATTTAGAGTTTTTTATTGACATTTGGAGCGAAGGCAAATTAGTCTTCTCAAAGGTGGTTCCGGGTAAAGTCCTCCAAGATGGTGTTAAGAACCCAACGCCTCGTACGGTTAATGTGCTTAGTTATCTATTAGAAGGCCCGGGGTTCAAGATGACTCTAGCAGTTGAGCCAGGGTTCTCAATTCCTATGTGTGATACGATCGGTGTATCCGTGATGGTGGGATACAAGGATTCTAGTAAAGTTGCTCAAATAGTCAATAAATCTATATTCGATTACGTCAATCAAACATCTTGCAGTGCATTTTATTTTGACTACCTTAATTCTCCACATCTCTACCCTCTTGCGTCCGGGATTCGAGTATGCATCTCATTTCTTTTCTTGGACAATGGAAATGGTGGTGTAGCTGAACTTTCTAGAATAGTAATGGATTTCAGTGACGTTGCAAACACAAAGGAGGAGGTATTATGTTTTTTGGACTGGCTCGATTGA

mRNA sequence

ATGTCATGGGAAATTTTGAATCTAGTTTTTCCGTTGTTGGAAGACGTGGACCTTGGTTCATGCATGGCAGTATCCAGAGAGTGGAGAGACGCAGCTCGAGATGATTACTTTTGGAAATGCTTGTGCATTAAGAGGTGGCCTTCAACTTACAAAATGTCTAATTTTCCGACGGGGACATACTATAAACTATATCGAAATTCTTACCAATGTTCCAATAGTCGACGTCTTCTCTCTCCTCGACTTTCGTTTGATGATTTAGAGTTTTTTATTGACATTTGGAGCGAAGGCAAATTAGTCTTCTCAAAGGTGGTTCCGGGTAAAGTCCTCCAAGATGGTGTTAAGAACCCAACGCCTCGTACGGTTAATGTGCTTAGTTATCTATTAGAAGGCCCGGGGTTCAAGATGACTCTAGCAGTTGAGCCAGGGTTCTCAATTCCTATGTGTGATACGATCGGTGTATCCGTGATGGTGGGATACAAGGATTCTAGTAAAGTTGCTCAAATAGTCAATAAATCTATATTCGATTACGTCAATCAAACATCTTGCAGTGCATTTTATTTTGACTACCTTAATTCTCCACATCTCTACCCTCTTGCGTCCGGGATTCGAGTATGCATCTCATTTCTTTTCTTGGACAATGGAAATGGTGGTGTAGCTGAACTTTCTAGAATAGTAATGGATTTCAGTGACGTTGCAAACACAAAGGAGGAGGTATTATGTTTTTTGGACTGGCTCGATTGA

Coding sequence (CDS)

ATGTCATGGGAAATTTTGAATCTAGTTTTTCCGTTGTTGGAAGACGTGGACCTTGGTTCATGCATGGCAGTATCCAGAGAGTGGAGAGACGCAGCTCGAGATGATTACTTTTGGAAATGCTTGTGCATTAAGAGGTGGCCTTCAACTTACAAAATGTCTAATTTTCCGACGGGGACATACTATAAACTATATCGAAATTCTTACCAATGTTCCAATAGTCGACGTCTTCTCTCTCCTCGACTTTCGTTTGATGATTTAGAGTTTTTTATTGACATTTGGAGCGAAGGCAAATTAGTCTTCTCAAAGGTGGTTCCGGGTAAAGTCCTCCAAGATGGTGTTAAGAACCCAACGCCTCGTACGGTTAATGTGCTTAGTTATCTATTAGAAGGCCCGGGGTTCAAGATGACTCTAGCAGTTGAGCCAGGGTTCTCAATTCCTATGTGTGATACGATCGGTGTATCCGTGATGGTGGGATACAAGGATTCTAGTAAAGTTGCTCAAATAGTCAATAAATCTATATTCGATTACGTCAATCAAACATCTTGCAGTGCATTTTATTTTGACTACCTTAATTCTCCACATCTCTACCCTCTTGCGTCCGGGATTCGAGTATGCATCTCATTTCTTTTCTTGGACAATGGAAATGGTGGTGTAGCTGAACTTTCTAGAATAGTAATGGATTTCAGTGACGTTGCAAACACAAAGGAGGAGGTATTATGTTTTTTGGACTGGCTCGATTGA

Protein sequence

MSWEILNLVFPLLEDVDLGSCMAVSREWRDAARDDYFWKCLCIKRWPSTYKMSNFPTGTYYKLYRNSYQCSNSRRLLSPRLSFDDLEFFIDIWSEGKLVFSKVVPGKVLQDGVKNPTPRTVNVLSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVMVGYKDSSKVAQIVNKSIFDYVNQTSCSAFYFDYLNSPHLYPLASGIRVCISFLFLDNGNGGVAELSRIVMDFSDVANTKEEVLCFLDWLD

Homology

[Close]

BLAST of Cp4.1LG07g05630 vs. Swiss-Prot
Match: FB270_ARATH (F-box protein At5g39250 OS=Arabidopsis thaliana GN=At5g39250 PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 6.7e-64
Identity = 123/248 (49.60%), Postives = 167/248 (67.34%), Query Frame = 1


Query: 2   SWEILNLVFPLLEDVDLGSCMAVSREWRDAARDDYFWKCLCIKRWPSTYKMSNFPTGTYY 61
           S E+L  VFPLLE  DL SCM V ++WRD ARDD++WKC C K+WPS  K    PT TYY
Sbjct: 3   SEEVLKNVFPLLEGEDLASCMGVCKQWRDIARDDFYWKCQCAKKWPSVCKRHKPPTETYY 62

Query: 62  KLYRNSYQCSNSRRLLSPRLSFDDLEFFIDIWSEGKLVFSKVVPGKVLQDGVKNPTPRTV 121
           K+Y+   +   +R L  PRLSF++LEFFIDIWSE +LVFS ++PG  L++G++       
Sbjct: 63  KMYQTFSKRRLNRALPPPRLSFENLEFFIDIWSEERLVFSGLIPGVALENGIETLPLGIS 122

Query: 122 NVLSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVMVGYKDSSKVAQIVNKSIFDYVNQTS 181
           NVL   L  P +KM +  EP F+IP+  ++ VSV+V   DS KVA+I+N+S+FDY++++S
Sbjct: 123 NVLRTHLGRPDYKMVVPAEPRFTIPLNQSVSVSVLVARNDSDKVARIINRSVFDYIDRSS 182

Query: 182 CSAFYFDYLNSPHLYPLASGIRVCISFLFL---DNGNGGVAELSRIVMDFSDVANTKEEV 241
             A  F+YL+    YP  SGIR  IS LF+   D  + G+ ++  I +DF+DVA+TKEEV
Sbjct: 183 YRALAFEYLDLSPCYPFISGIRAWISLLFMDVEDMNDDGLLDVFGIQLDFNDVADTKEEV 242

Query: 242 LCFLDWLD 247
           L  LD LD
Sbjct: 243 LWLLDMLD 250

[Close]

BLAST of Cp4.1LG07g05630 vs. TrEMBL
Match: A0A0A0L6S1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017250 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 3.3e-86
Identity = 158/247 (63.97%), Postives = 193/247 (78.14%), Query Frame = 1


Query: 1   MSW-EILNLVFPLLEDVDLGSCMAVSREWRDAARDDYFWKCLCIKRWPSTYKMSNFPTGT 60
           M+W EIL ++FPLLE VDL SCMAV ++WRD A+DDYFWKCLC K+WPST K S+ PT T
Sbjct: 1   MTWEEILKVIFPLLEGVDLASCMAVCKQWRDIAQDDYFWKCLCAKKWPSTCKTSHPPTDT 60

Query: 61  YYKLYRNSYQCSNSRRLLSPRLSFDDLEFFIDIWSEGKLVFSKVVPGKVLQDGVKNPTPR 120
           YYKLYRN Y+  N+RRLL PRLSFDDLEFFIDIWSE +L+FS+VV G + Q+G+KNP P 
Sbjct: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGGIFQNGMKNPPPS 120

Query: 121 TVNVLSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVMVGYKDSSKVAQIVNKSIFDYVNQ 180
           T N+LSY LE P FKMTL VEP FSIP+ +T+  SV+VG KDS+KVA+IVNKS+FDY+++
Sbjct: 121 TGNLLSYHLEVPEFKMTLTVEPRFSIPISNTVSASVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSCSAFYFDYLNSPHLYPLASGIRVCISFLFLDNGNGGVAELSRIVMDFSDVANTKEEVL 240
           TS  A  FDYL+    +P  SGIR  IS LF+D+G+ G  ++  IVMDF D ANTK+EVL
Sbjct: 181 TSYRALAFDYLDFSPFHPFVSGIRAWISLLFMDDGDDGAIDVFGIVMDFCDAANTKDEVL 240

Query: 241 CFLDWLD 247
             LD LD
Sbjct: 241 WLLDLLD 247

[Close]

BLAST of Cp4.1LG07g05630 vs. TrEMBL
Match: B9SJD7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0525640 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 4.1e-76
Identity = 139/243 (57.20%), Postives = 178/243 (73.25%), Query Frame = 1


Query: 4   EILNLVFPLLEDVDLGSCMAVSREWRDAARDDYFWKCLCIKRWPSTYKMSNFPTGTYYKL 63
           E+L  VFPLL+ VDL SCM VS++WRD ARDDYFWKCLC KRWPS  K  N PT TY KL
Sbjct: 5   EVLKAVFPLLDGVDLASCMVVSKQWRDTARDDYFWKCLCAKRWPSICKRPNPPTVTYCKL 64

Query: 64  YRNSYQCSNSRRLLSPRLSFDDLEFFIDIWSEGKLVFSKVVPGKVLQDGVKNPTPRTVNV 123
           Y+  Y+  N + LL PRLSFDDLEFFIDIWSE KL+FS+VVPG VL  G+K P P   ++
Sbjct: 65  YQTFYKRQNRQTLLPPRLSFDDLEFFIDIWSEEKLIFSEVVPGPVLLGGIKVPPPGICDI 124

Query: 124 LSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVMVGYKDSSKVAQIVNKSIFDYVNQTSCS 183
           L + LEGP +KMTL VEP   IP+  T+ VSV+VG KD++KVA+++N+S+FDY+++T+  
Sbjct: 125 LRFHLEGPDYKMTLPVEPRVKIPLSQTVSVSVLVGRKDTNKVARVINRSVFDYIDRTAYR 184

Query: 184 AFYFDYLNSPHLYPLASGIRVCISFLFLDNGNGGVAELSRIVMDFSDVANTKEEVLCFLD 243
           +  F+YL+    +P   GIR  IS LF+++GN GV ++  I MDF D AN++EEVL  LD
Sbjct: 185 SMAFEYLDFSPAHPFVPGIRAWISLLFMEDGNEGVIDVFGIEMDFRDAANSREEVLWLLD 244

Query: 244 WLD 247
            LD
Sbjct: 245 MLD 247

[Close]

BLAST of Cp4.1LG07g05630 vs. TrEMBL
Match: A0A161Y7G0_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_025424 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.0e-74
Identity = 135/243 (55.56%), Postives = 176/243 (72.43%), Query Frame = 1


Query: 4   EILNLVFPLLEDVDLGSCMAVSREWRDAARDDYFWKCLCIKRWPSTYKMSNFPTGTYYKL 63
           E+L  VFPLL+  DL SCM VS++WRD A+DDYFWKCLC KRWPS  K  + PT TYYKL
Sbjct: 5   EVLKDVFPLLDGTDLASCMLVSKQWRDIAQDDYFWKCLCFKRWPSICKRPSAPTETYYKL 64

Query: 64  YRNSYQCSNSRRLLSPRLSFDDLEFFIDIWSEGKLVFSKVVPGKVLQDGVKNPTPRTVNV 123
           ++  Y+  + ++LL PRLSF DLEF+IDIWSE  L+FS+V+ G VLQ GV NP P   +V
Sbjct: 65  FKTFYKRQHQKKLLPPRLSFSDLEFYIDIWSEDSLIFSEVIAGPVLQKGVWNPPPGICDV 124

Query: 124 LSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVMVGYKDSSKVAQIVNKSIFDYVNQTSCS 183
           L + LEGP +KMT +V+P FS+P+C TI VS++VG KDS+KVA I+NKS+FDY+++TS  
Sbjct: 125 LRFHLEGPEYKMTFSVDPRFSVPLCQTISVSMLVGRKDSNKVACIINKSVFDYIDRTSYR 184

Query: 184 AFYFDYLNSPHLYPLASGIRVCISFLFLDNGNGGVAELSRIVMDFSDVANTKEEVLCFLD 243
           A  FDYL     YP  SGIR  +S LF+D G+  V ++  + +DF D AN+++EVL   D
Sbjct: 185 ALAFDYLEFSSSYPFVSGIRAWMSLLFMDKGSEEVIDVFGVEIDFCDAANSEDEVLWLFD 244

Query: 244 WLD 247
            LD
Sbjct: 245 MLD 247

[Close]

BLAST of Cp4.1LG07g05630 vs. TrEMBL
Match: A0A061EG72_THECC (F-box protein OS=Theobroma cacao GN=TCM_018725 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.0e-74
Identity = 135/239 (56.49%), Postives = 177/239 (74.06%), Query Frame = 1


Query: 4   EILNLVFPLLEDVDLGSCMAVSREWRDAARDDYFWKCLCIKRWPSTYKMSNFPTGTYYKL 63
           E+L +VFPLL+ +DL +CM V ++WRD ARDDYFW+C+C KRWPS  K  N PT TYYKL
Sbjct: 5   EVLKVVFPLLDGIDLAACMVVCKQWRDIARDDYFWRCVCAKRWPSICKRPNPPTVTYYKL 64

Query: 64  YRNSYQCSNSRRLLSPRLSFDDLEFFIDIWSEGKLVFSKVVPGKVLQDGVKNPTPRTVNV 123
           Y+  Y+  + R LL PRLSFDDLEFFIDIW+E KL+FS+VVPG VLQ G+K P     ++
Sbjct: 65  YQTFYKRQHKRTLLPPRLSFDDLEFFIDIWTEDKLIFSEVVPGPVLQTGIKIPPTGICDM 124

Query: 124 LSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVMVGYKDSSKVAQIVNKSIFDYVNQTSCS 183
           L + LEGP +KMTL VEP F++P   T+ VSV+V  KDS+KVA I+NKS+FDY+++T+  
Sbjct: 125 LKFHLEGPEYKMTLPVEPRFTVPWSQTVSVSVLVERKDSNKVACIINKSLFDYIDRTAYR 184

Query: 184 AFYFDYLNSPHLYPLASGIRVCISFLFLDNGNGGVAELSRIVMDFSDVANTKEEVLCFL 243
           A  FDYL+    YP  SGIR  IS LF+++GN GV ++  I MDF D AN+KEE++ ++
Sbjct: 185 ALAFDYLDFSPNYPFISGIRAWISLLFMEDGNDGVIDVFGIEMDFCDAANSKEELVAYV 243

[Close]

BLAST of Cp4.1LG07g05630 vs. TrEMBL
Match: M5X692_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010438mg PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.9e-73
Identity = 137/243 (56.38%), Postives = 175/243 (72.02%), Query Frame = 1


Query: 4   EILNLVFPLLEDVDLGSCMAVSREWRDAARDDYFWKCLCIKRWPSTYKMSNFPTGTYYKL 63
           E+L  VFPLLE VDL SCM VS++WR  ARDD+FWKC C KRWPS  K  N PT TYYKL
Sbjct: 5   EVLKAVFPLLEGVDLASCMVVSKQWRHIARDDFFWKCACAKRWPSICKRPNPPTLTYYKL 64

Query: 64  YRNSYQCSNSRRLLSPRLSFDDLEFFIDIWSEGKLVFSKVVPGKVLQDGVKNPTPRTVNV 123
           Y+  Y+    R LL PRLSFDDLEFFIDIW+E + +FS+VVPG +LQ+G+K P P   ++
Sbjct: 65  YQTFYKRRPGRILLPPRLSFDDLEFFIDIWTEDRFIFSEVVPGPILQNGIKIPPPGVCDM 124

Query: 124 LSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVMVGYKDSSKVAQIVNKSIFDYVNQTSCS 183
           L   +E   +KM + VEP F++P+  T+ VSV+VG KDS+KVA I+NKS+FDY+++T+  
Sbjct: 125 LRLHMESSEYKMKVPVEPRFTVPLSQTVNVSVLVGRKDSNKVACILNKSMFDYIDRTAYR 184

Query: 184 AFYFDYLNSPHLYPLASGIRVCISFLFLDNGNGGVAELSRIVMDFSDVANTKEEVLCFLD 243
           A   DYL+   +YP  +GIR  IS LF+D+GN GV ++  I MDF D AN+KEEVL  LD
Sbjct: 185 AMANDYLDFSPVYPFTTGIRAWISLLFMDSGNEGVVDVFGIEMDFMDAANSKEEVLWLLD 244

Query: 244 WLD 247
            LD
Sbjct: 245 MLD 247

[Close]

BLAST of Cp4.1LG07g05630 vs. TAIR10
Match: AT5G39250.1 (AT5G39250.1 F-box family protein)

HSP 1 Score: 245.4 bits (625), Expect = 3.8e-65
Identity = 123/248 (49.60%), Postives = 167/248 (67.34%), Query Frame = 1


Query: 2   SWEILNLVFPLLEDVDLGSCMAVSREWRDAARDDYFWKCLCIKRWPSTYKMSNFPTGTYY 61
           S E+L  VFPLLE  DL SCM V ++WRD ARDD++WKC C K+WPS  K    PT TYY
Sbjct: 3   SEEVLKNVFPLLEGEDLASCMGVCKQWRDIARDDFYWKCQCAKKWPSVCKRHKPPTETYY 62

Query: 62  KLYRNSYQCSNSRRLLSPRLSFDDLEFFIDIWSEGKLVFSKVVPGKVLQDGVKNPTPRTV 121
           K+Y+   +   +R L  PRLSF++LEFFIDIWSE +LVFS ++PG  L++G++       
Sbjct: 63  KMYQTFSKRRLNRALPPPRLSFENLEFFIDIWSEERLVFSGLIPGVALENGIETLPLGIS 122

Query: 122 NVLSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVMVGYKDSSKVAQIVNKSIFDYVNQTS 181
           NVL   L  P +KM +  EP F+IP+  ++ VSV+V   DS KVA+I+N+S+FDY++++S
Sbjct: 123 NVLRTHLGRPDYKMVVPAEPRFTIPLNQSVSVSVLVARNDSDKVARIINRSVFDYIDRSS 182

Query: 182 CSAFYFDYLNSPHLYPLASGIRVCISFLFL---DNGNGGVAELSRIVMDFSDVANTKEEV 241
             A  F+YL+    YP  SGIR  IS LF+   D  + G+ ++  I +DF+DVA+TKEEV
Sbjct: 183 YRALAFEYLDLSPCYPFISGIRAWISLLFMDVEDMNDDGLLDVFGIQLDFNDVADTKEEV 242

Query: 242 LCFLDWLD 247
           L  LD LD
Sbjct: 243 LWLLDMLD 250

[Close]

BLAST of Cp4.1LG07g05630 vs. NCBI nr
Match: gi|659095831|ref|XP_008448789.1| (PREDICTED: F-box protein At5g39250 [Cucumis melo])

HSP 1 Score: 329.3 bits (843), Expect = 5.6e-87
Identity = 159/247 (64.37%), Postives = 194/247 (78.54%), Query Frame = 1


Query: 1   MSW-EILNLVFPLLEDVDLGSCMAVSREWRDAARDDYFWKCLCIKRWPSTYKMSNFPTGT 60
           M+W E+L ++FPLLE VDL SCMAV ++WRD ARDDYFWKCLC K+WPST K S+ PT T
Sbjct: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT 60

Query: 61  YYKLYRNSYQCSNSRRLLSPRLSFDDLEFFIDIWSEGKLVFSKVVPGKVLQDGVKNPTPR 120
           YYKLYRN Y+  N+RRLL PRLSFDDLEFFIDIWSE +L+FS+ V G++LQ+G+K+P P 
Sbjct: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG 120

Query: 121 TVNVLSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVMVGYKDSSKVAQIVNKSIFDYVNQ 180
           T NVLSY LE P FKMTL VEP FSIP+ + +  SV+VG KDS+KVA+IVNKS+FDY+++
Sbjct: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSCSAFYFDYLNSPHLYPLASGIRVCISFLFLDNGNGGVAELSRIVMDFSDVANTKEEVL 240
           TS  A  FDYL+   L+P  SGIR  IS LF+D+GN G  ++  IVMDF D ANTK+EVL
Sbjct: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL 240

Query: 241 CFLDWLD 247
             LD LD
Sbjct: 241 WLLDLLD 247

[Close]

BLAST of Cp4.1LG07g05630 vs. NCBI nr
Match: gi|449458996|ref|XP_004147232.1| (PREDICTED: F-box protein At5g39250 [Cucumis sativus])

HSP 1 Score: 326.2 bits (835), Expect = 4.8e-86
Identity = 158/247 (63.97%), Postives = 193/247 (78.14%), Query Frame = 1


Query: 1   MSW-EILNLVFPLLEDVDLGSCMAVSREWRDAARDDYFWKCLCIKRWPSTYKMSNFPTGT 60
           M+W EIL ++FPLLE VDL SCMAV ++WRD A+DDYFWKCLC K+WPST K S+ PT T
Sbjct: 1   MTWEEILKVIFPLLEGVDLASCMAVCKQWRDIAQDDYFWKCLCAKKWPSTCKTSHPPTDT 60

Query: 61  YYKLYRNSYQCSNSRRLLSPRLSFDDLEFFIDIWSEGKLVFSKVVPGKVLQDGVKNPTPR 120
           YYKLYRN Y+  N+RRLL PRLSFDDLEFFIDIWSE +L+FS+VV G + Q+G+KNP P 
Sbjct: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGGIFQNGMKNPPPS 120

Query: 121 TVNVLSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVMVGYKDSSKVAQIVNKSIFDYVNQ 180
           T N+LSY LE P FKMTL VEP FSIP+ +T+  SV+VG KDS+KVA+IVNKS+FDY+++
Sbjct: 121 TGNLLSYHLEVPEFKMTLTVEPRFSIPISNTVSASVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSCSAFYFDYLNSPHLYPLASGIRVCISFLFLDNGNGGVAELSRIVMDFSDVANTKEEVL 240
           TS  A  FDYL+    +P  SGIR  IS LF+D+G+ G  ++  IVMDF D ANTK+EVL
Sbjct: 181 TSYRALAFDYLDFSPFHPFVSGIRAWISLLFMDDGDDGAIDVFGIVMDFCDAANTKDEVL 240

Query: 241 CFLDWLD 247
             LD LD
Sbjct: 241 WLLDLLD 247

[Close]

BLAST of Cp4.1LG07g05630 vs. NCBI nr
Match: gi|255570292|ref|XP_002526106.1| (PREDICTED: F-box protein At5g39250 [Ricinus communis])

HSP 1 Score: 292.7 bits (748), Expect = 5.8e-76
Identity = 139/243 (57.20%), Postives = 178/243 (73.25%), Query Frame = 1


Query: 4   EILNLVFPLLEDVDLGSCMAVSREWRDAARDDYFWKCLCIKRWPSTYKMSNFPTGTYYKL 63
           E+L  VFPLL+ VDL SCM VS++WRD ARDDYFWKCLC KRWPS  K  N PT TY KL
Sbjct: 5   EVLKAVFPLLDGVDLASCMVVSKQWRDTARDDYFWKCLCAKRWPSICKRPNPPTVTYCKL 64

Query: 64  YRNSYQCSNSRRLLSPRLSFDDLEFFIDIWSEGKLVFSKVVPGKVLQDGVKNPTPRTVNV 123
           Y+  Y+  N + LL PRLSFDDLEFFIDIWSE KL+FS+VVPG VL  G+K P P   ++
Sbjct: 65  YQTFYKRQNRQTLLPPRLSFDDLEFFIDIWSEEKLIFSEVVPGPVLLGGIKVPPPGICDI 124

Query: 124 LSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVMVGYKDSSKVAQIVNKSIFDYVNQTSCS 183
           L + LEGP +KMTL VEP   IP+  T+ VSV+VG KD++KVA+++N+S+FDY+++T+  
Sbjct: 125 LRFHLEGPDYKMTLPVEPRVKIPLSQTVSVSVLVGRKDTNKVARVINRSVFDYIDRTAYR 184

Query: 184 AFYFDYLNSPHLYPLASGIRVCISFLFLDNGNGGVAELSRIVMDFSDVANTKEEVLCFLD 243
           +  F+YL+    +P   GIR  IS LF+++GN GV ++  I MDF D AN++EEVL  LD
Sbjct: 185 SMAFEYLDFSPAHPFVPGIRAWISLLFMEDGNEGVIDVFGIEMDFRDAANSREEVLWLLD 244

Query: 244 WLD 247
            LD
Sbjct: 245 MLD 247

[Close]

BLAST of Cp4.1LG07g05630 vs. NCBI nr
Match: gi|1009125874|ref|XP_015879848.1| (PREDICTED: F-box protein At5g39250 [Ziziphus jujuba])

HSP 1 Score: 290.0 bits (741), Expect = 3.8e-75
Identity = 140/243 (57.61%), Postives = 178/243 (73.25%), Query Frame = 1


Query: 4   EILNLVFPLLEDVDLGSCMAVSREWRDAARDDYFWKCLCIKRWPSTYKMSNFPTGTYYKL 63
           E+L  VFPLLE VDL SCMAVS++WR  A+DDY WKCLC KRWPS  K  N PT TYYKL
Sbjct: 5   EVLKAVFPLLEGVDLASCMAVSKQWRSLAQDDYLWKCLCAKRWPSICKRPNPPTVTYYKL 64

Query: 64  YRNSYQCSNSRRLLSPRLSFDDLEFFIDIWSEGKLVFSKVVPGKVLQDGVKNPTPRTVNV 123
           Y+  Y+  + R LL PRLSFDDLEFFID+W+E +L+FS+VVPG VLQ G+K P     ++
Sbjct: 65  YQTFYKRQHCRTLLPPRLSFDDLEFFIDVWTEDRLIFSEVVPGPVLQTGIKIPPAGICDM 124

Query: 124 LSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVMVGYKDSSKVAQIVNKSIFDYVNQTSCS 183
           L + LEGP +KMTL VEP F +P+  T+ VSV+VG KD++KVA I+NKS+FDY+++T+  
Sbjct: 125 LRFHLEGPEYKMTLPVEPRFKVPLSQTVSVSVLVGRKDTNKVACIINKSMFDYIDRTAFR 184

Query: 184 AFYFDYLNSPHLYPLASGIRVCISFLFLDNGNGGVAELSRIVMDFSDVANTKEEVLCFLD 243
           A  FDYL+   +Y   SGIR  IS LF+++G+  V ++  I MDF D AN+KEEVL  LD
Sbjct: 185 ALAFDYLDFSPIYYFISGIRAWISLLFMEDGSESVIDVFGIEMDFCDAANSKEEVLWLLD 244

Query: 244 WLD 247
            LD
Sbjct: 245 MLD 247

[Close]

BLAST of Cp4.1LG07g05630 vs. NCBI nr
Match: gi|590650724|ref|XP_007032712.1| (F-box protein [Theobroma cacao])

HSP 1 Score: 288.1 bits (736), Expect = 1.4e-74
Identity = 135/239 (56.49%), Postives = 177/239 (74.06%), Query Frame = 1


Query: 4   EILNLVFPLLEDVDLGSCMAVSREWRDAARDDYFWKCLCIKRWPSTYKMSNFPTGTYYKL 63
           E+L +VFPLL+ +DL +CM V ++WRD ARDDYFW+C+C KRWPS  K  N PT TYYKL
Sbjct: 5   EVLKVVFPLLDGIDLAACMVVCKQWRDIARDDYFWRCVCAKRWPSICKRPNPPTVTYYKL 64

Query: 64  YRNSYQCSNSRRLLSPRLSFDDLEFFIDIWSEGKLVFSKVVPGKVLQDGVKNPTPRTVNV 123
           Y+  Y+  + R LL PRLSFDDLEFFIDIW+E KL+FS+VVPG VLQ G+K P     ++
Sbjct: 65  YQTFYKRQHKRTLLPPRLSFDDLEFFIDIWTEDKLIFSEVVPGPVLQTGIKIPPTGICDM 124

Query: 124 LSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVMVGYKDSSKVAQIVNKSIFDYVNQTSCS 183
           L + LEGP +KMTL VEP F++P   T+ VSV+V  KDS+KVA I+NKS+FDY+++T+  
Sbjct: 125 LKFHLEGPEYKMTLPVEPRFTVPWSQTVSVSVLVERKDSNKVACIINKSLFDYIDRTAYR 184

Query: 184 AFYFDYLNSPHLYPLASGIRVCISFLFLDNGNGGVAELSRIVMDFSDVANTKEEVLCFL 243
           A  FDYL+    YP  SGIR  IS LF+++GN GV ++  I MDF D AN+KEE++ ++
Sbjct: 185 ALAFDYLDFSPNYPFISGIRAWISLLFMEDGNDGVIDVFGIEMDFCDAANSKEELVAYV 243

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g05630 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FB270_ARATH	6.7e-64	49.60	F-box protein At5g39250 OS=Arabidopsis thaliana GN=At5g39250 PE=2 SV=1	[more]

BLAST of Cp4.1LG07g05630 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6S1_CUCSA	3.3e-86	63.97	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017250 PE=4 SV=1	[more]
B9SJD7_RICCO	4.1e-76	57.20	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0525640 PE=4 SV=1	[more]
A0A161Y7G0_DAUCA	1.0e-74	55.56	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_025424 PE=4 SV=1	[more]
A0A061EG72_THECC	1.0e-74	56.49	F-box protein OS=Theobroma cacao GN=TCM_018725 PE=4 SV=1	[more]
M5X692_PRUPE	1.9e-73	56.38	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010438mg PE=4 SV=1	[more]

BLAST of Cp4.1LG07g05630 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G39250.1	3.8e-65	49.60	F-box family protein	[more]

BLAST of Cp4.1LG07g05630 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659095831\|ref\|XP_008448789.1\|	5.6e-87	64.37	PREDICTED: F-box protein At5g39250 [Cucumis melo]	[more]
gi\|449458996\|ref\|XP_004147232.1\|	4.8e-86	63.97	PREDICTED: F-box protein At5g39250 [Cucumis sativus]	[more]
gi\|255570292\|ref\|XP_002526106.1\|	5.8e-76	57.20	PREDICTED: F-box protein At5g39250 [Ricinus communis]	[more]
gi\|1009125874\|ref\|XP_015879848.1\|	3.8e-75	57.61	PREDICTED: F-box protein At5g39250 [Ziziphus jujuba]	[more]
gi\|590650724\|ref\|XP_007032712.1\|	1.4e-74	56.49	F-box protein [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g05630.1	Cp4.1LG07g05630.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 4..44 score: 3.
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 1..41 score: 9.
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 3..68 score: 4.58
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 4..74 score: 2.2
None	No IPR available	PANTHER	PTHR20995	FAMILY NOT NAMED	coord: 4..246 score: 9.8
None	No IPR available	PANTHER	PTHR20995:SF15	SUBFAMILY NOT NAMED	coord: 4..246 score: 9.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG07g05630	CmaCh12G007070	Cucurbita maxima (Rimu)	cmacpeB203
Cp4.1LG07g05630	CmoCh12G006410	Cucurbita moschata (Rifu)	cmocpeB174
Cp4.1LG07g05630	Carg17625	Silver-seed gourd	carcpeB0193

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG07g05630	Melon (DHL92) v3.6.1	cpemedB899
Cp4.1LG07g05630	Melon (DHL92) v3.6.1	cpemedB894
Cp4.1LG07g05630	Cucumber (Chinese Long) v3	cpecucB1034
Cp4.1LG07g05630	Cucumber (Chinese Long) v3	cpecucB1041
Cp4.1LG07g05630	Wax gourd	cpewgoB1036
Cp4.1LG07g05630	Cucurbita pepo (Zucchini)	cpecpeB149
Cp4.1LG07g05630	Cucumber (Gy14) v1	cgycpeB0090
Cp4.1LG07g05630	Cucumber (Gy14) v1	cgycpeB0092
Cp4.1LG07g05630	Cucurbita maxima (Rimu)	cmacpeB800
Cp4.1LG07g05630	Cucurbita moschata (Rifu)	cmocpeB753
Cp4.1LG07g05630	Wild cucumber (PI 183967)	cpecpiB847
Cp4.1LG07g05630	Wild cucumber (PI 183967)	cpecpiB840
Cp4.1LG07g05630	Cucumber (Chinese Long) v2	cpecuB838
Cp4.1LG07g05630	Cucumber (Chinese Long) v2	cpecuB844
Cp4.1LG07g05630	Bottle gourd (USVL1VR-Ls)	cpelsiB692
Cp4.1LG07g05630	Bottle gourd (USVL1VR-Ls)	cpelsiB687
Cp4.1LG07g05630	Watermelon (Charleston Gray)	cpewcgB750
Cp4.1LG07g05630	Watermelon (Charleston Gray)	cpewcgB756
Cp4.1LG07g05630	Watermelon (97103) v1	cpewmB784
Cp4.1LG07g05630	Watermelon (97103) v1	cpewmB788
Cp4.1LG07g05630	Melon (DHL92) v3.5.1	cpemeB758
Cp4.1LG07g05630	Melon (DHL92) v3.5.1	cpemeB763
Cp4.1LG07g05630	Cucumber (Gy14) v2	cgybcpeB878
Cp4.1LG07g05630	Cucumber (Gy14) v2	cgybcpeB882