Carg17625 (gene) Silver-seed gourd

Overview
NameCarg17625
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionF-box protein
LocationCucurbita_argyrosperma_scaffold_119 : 345588 .. 346334 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATGGGAAATTTTGAATCTAGTTTTTCCGTTGTTGGAAGACGTGGACCTTGCTTCATGCATGGCAGTATCCAGAGAGTGGAGAGACGTAGCTCGAGATGATTACTTTTGGAAATGCTTGTGCATTAAGAGGTGGCCTTCAACCTACAAAATGTCTAATTTTCCGATTGGGACGTATTATAAACTATATCGAAATTCTTACCAATGTCCTAATAGTCGACGTCTTCTCTCTCCTCGACTTTCGTTTGATGATTTAGAGTTTTTTATTGACATTTGGAGCGAAGGCAATTTAGTCTTCTCAAAGGTGGTTCCGGGTAAAGTCCTCCAAGATGGTGTTAAGAACCCAACGCCTCGTACGATTAATGTGCTTAGTTATCTATTAGAAGGCCCGGGGTTCAAGATGACTCTAGCAGTTGAGCCAGGGTTCTCAATTCCTATGTGTGATACGATCGGTGTATCCGTGATTGTGGGATACAAGGATTCTAGTAAAGTTGCTCAAATAGTCAATAAATCTATATTCGATTACGTCGATCAAACATCTTGCAGGGCATTTTATTTTGACTACCTTAATTTTCCACATCTCTACCCTCTTGCGTCTGGGATTCGAGTCTGCATCTCATTTCTTTTCTTGGGCAATGGAAATGGTGATGTAGCTGAAGTTTCTGGAATAGTAATGGATTTCAGTGATGTTGCAAACACAAAGGAGGAGGTATTATGTCTTTTGGAGCGGCTCGATTGGAAATGA

mRNA sequence

ATGGCATGGGAAATTTTGAATCTAGTTTTTCCGTTGTTGGAAGACGTGGACCTTGCTTCATGCATGGCAGTATCCAGAGAGTGGAGAGACGTAGCTCGAGATGATTACTTTTGGAAATGCTTGTGCATTAAGAGGTGGCCTTCAACCTACAAAATGTCTAATTTTCCGATTGGGACGTATTATAAACTATATCGAAATTCTTACCAATGTCCTAATAGTCGACGTCTTCTCTCTCCTCGACTTTCGTTTGATGATTTAGAGTTTTTTATTGACATTTGGAGCGAAGGCAATTTAGTCTTCTCAAAGGTGGTTCCGGGTAAAGTCCTCCAAGATGGTGTTAAGAACCCAACGCCTCGTACGATTAATGTGCTTAGTTATCTATTAGAAGGCCCGGGGTTCAAGATGACTCTAGCAGTTGAGCCAGGGTTCTCAATTCCTATGTGTGATACGATCGGTGTATCCGTGATTGTGGGATACAAGGATTCTAGTAAAGTTGCTCAAATAGTCAATAAATCTATATTCGATTACGTCGATCAAACATCTTGCAGGGCATTTTATTTTGACTACCTTAATTTTCCACATCTCTACCCTCTTGCGTCTGGGATTCGAGTCTGCATCTCATTTCTTTTCTTGGGCAATGGAAATGGTGATGTAGCTGAAGTTTCTGGAATAGTAATGGATTTCAGTGATGTTGCAAACACAAAGGAGGAGGTATTATGTCTTTTGGAGCGGCTCGATTGGAAATGA

Coding sequence (CDS)

ATGGCATGGGAAATTTTGAATCTAGTTTTTCCGTTGTTGGAAGACGTGGACCTTGCTTCATGCATGGCAGTATCCAGAGAGTGGAGAGACGTAGCTCGAGATGATTACTTTTGGAAATGCTTGTGCATTAAGAGGTGGCCTTCAACCTACAAAATGTCTAATTTTCCGATTGGGACGTATTATAAACTATATCGAAATTCTTACCAATGTCCTAATAGTCGACGTCTTCTCTCTCCTCGACTTTCGTTTGATGATTTAGAGTTTTTTATTGACATTTGGAGCGAAGGCAATTTAGTCTTCTCAAAGGTGGTTCCGGGTAAAGTCCTCCAAGATGGTGTTAAGAACCCAACGCCTCGTACGATTAATGTGCTTAGTTATCTATTAGAAGGCCCGGGGTTCAAGATGACTCTAGCAGTTGAGCCAGGGTTCTCAATTCCTATGTGTGATACGATCGGTGTATCCGTGATTGTGGGATACAAGGATTCTAGTAAAGTTGCTCAAATAGTCAATAAATCTATATTCGATTACGTCGATCAAACATCTTGCAGGGCATTTTATTTTGACTACCTTAATTTTCCACATCTCTACCCTCTTGCGTCTGGGATTCGAGTCTGCATCTCATTTCTTTTCTTGGGCAATGGAAATGGTGATGTAGCTGAAGTTTCTGGAATAGTAATGGATTTCAGTGATGTTGCAAACACAAAGGAGGAGGTATTATGTCTTTTGGAGCGGCTCGATTGGAAATGA

Protein sequence

MAWEILNLVFPLLEDVDLASCMAVSREWRDVARDDYFWKCLCIKRWPSTYKMSNFPIGTYYKLYRNSYQCPNSRRLLSPRLSFDDLEFFIDIWSEGNLVFSKVVPGKVLQDGVKNPTPRTINVLSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVIVGYKDSSKVAQIVNKSIFDYVDQTSCRAFYFDYLNFPHLYPLASGIRVCISFLFLGNGNGDVAEVSGIVMDFSDVANTKEEVLCLLERLDWK
Homology
[Close]
BLAST of Carg17625 vs. NCBI nr
Match: XP_022951059.1 (F-box protein At5g39250-like [Cucurbita moschata])

HSP 1 Score: 516.2 bits (1328), Expect = 6.4e-143
Identity = 247/248 (99.60%), Postives = 247/248 (99.60%), Query Frame = 0 

Query: 1   MAWEILNLVFPLLEDVDLASCMAVSREWRDVARDDYFWKCLCIKRWPSTYKMSNFPIGTY 60
           MAWEILNLVFPLLEDVDLASCMAVSREWRDVARDDYFWKCLCIKRWPSTYKMSNFP GTY
Sbjct: 1   MAWEILNLVFPLLEDVDLASCMAVSREWRDVARDDYFWKCLCIKRWPSTYKMSNFPTGTY 60

Query: 61  YKLYRNSYQCPNSRRLLSPRLSFDDLEFFIDIWSEGNLVFSKVVPGKVLQDGVKNPTPRT 120
           YKLYRNSYQCPNSRRLLSPRLSFDDLEFFIDIWSEGNLVFSKVVPGKVLQDGVKNPTPRT
Sbjct: 61  YKLYRNSYQCPNSRRLLSPRLSFDDLEFFIDIWSEGNLVFSKVVPGKVLQDGVKNPTPRT 120

Query: 121 INVLSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVIVGYKDSSKVAQIVNKSIFDYVDQT 180
           INVLSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVIVGYKDSSKVAQIVNKSIFDYVDQT
Sbjct: 121 INVLSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVIVGYKDSSKVAQIVNKSIFDYVDQT 180

Query: 181 SCRAFYFDYLNFPHLYPLASGIRVCISFLFLGNGNGDVAEVSGIVMDFSDVANTKEEVLC 240
           SCRAFYFDYLNFPHLYPLASGIRVCISFLFLGNGNGDVAEVSGIVMDFSDVANTKEEVLC
Sbjct: 181 SCRAFYFDYLNFPHLYPLASGIRVCISFLFLGNGNGDVAEVSGIVMDFSDVANTKEEVLC 240

Query: 241 LLERLDWK 249
           LLERLDWK
Sbjct: 241 LLERLDWK 248

[Close]
BLAST of Carg17625 vs. NCBI nr
Match: XP_023536935.1 (F-box protein At5g39250-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 475.7 bits (1223), Expect = 9.5e-131
Identity = 228/246 (92.68%), Postives = 234/246 (95.12%), Query Frame = 0 

Query: 1   MAWEILNLVFPLLEDVDLASCMAVSREWRDVARDDYFWKCLCIKRWPSTYKMSNFPIGTY 60
           M+WEILNLVFPLLEDVDL SCMAVSREWRD ARDDYFWKCLCIKRWPSTYKMSNFP GTY
Sbjct: 1   MSWEILNLVFPLLEDVDLGSCMAVSREWRDAARDDYFWKCLCIKRWPSTYKMSNFPTGTY 60

Query: 61  YKLYRNSYQCPNSRRLLSPRLSFDDLEFFIDIWSEGNLVFSKVVPGKVLQDGVKNPTPRT 120
           YKLYRNSYQC NSRRLLSPRLSFDDLEFFIDIWSEG LVFSKVVPGKVLQDGVKNPTPRT
Sbjct: 61  YKLYRNSYQCSNSRRLLSPRLSFDDLEFFIDIWSEGKLVFSKVVPGKVLQDGVKNPTPRT 120

Query: 121 INVLSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVIVGYKDSSKVAQIVNKSIFDYVDQT 180
           +NVLSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSV+VGYKDSSKVAQIVNKSIFDYV+QT
Sbjct: 121 VNVLSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVMVGYKDSSKVAQIVNKSIFDYVNQT 180

Query: 181 SCRAFYFDYLNFPHLYPLASGIRVCISFLFLGNGNGDVAEVSGIVMDFSDVANTKEEVLC 240
           SC AFYFDYLN PHLYPLASGIRVCISFLFL NGNG VAE+S IVMDFSDVANTKEEVLC
Sbjct: 181 SCSAFYFDYLNSPHLYPLASGIRVCISFLFLDNGNGGVAELSRIVMDFSDVANTKEEVLC 240

Query: 241 LLERLD 247
            L+ LD
Sbjct: 241 FLDWLD 246

[Close]
BLAST of Carg17625 vs. NCBI nr
Match: XP_023001983.1 (F-box protein At5g39250-like [Cucurbita maxima])

HSP 1 Score: 472.2 bits (1214), Expect = 1.1e-129
Identity = 221/248 (89.11%), Postives = 234/248 (94.35%), Query Frame = 0 

Query: 1   MAWEILNLVFPLLEDVDLASCMAVSREWRDVARDDYFWKCLCIKRWPSTYKMSNFPIGTY 60
           M+WEILNLVFPLL+DVDLASCMAVSR+WRD ARDDYFWKCLC KRWPSTYK SNFP GTY
Sbjct: 1   MSWEILNLVFPLLDDVDLASCMAVSRQWRDAARDDYFWKCLCAKRWPSTYKTSNFPTGTY 60

Query: 61  YKLYRNSYQCPNSRRLLSPRLSFDDLEFFIDIWSEGNLVFSKVVPGKVLQDGVKNPTPRT 120
           YKLY+NSY+CP  R LLSPRLSFDDLEFFIDIWSEG LVFSKVVPG+VLQDG+KNPTPRT
Sbjct: 61  YKLYQNSYKCPQRRSLLSPRLSFDDLEFFIDIWSEGRLVFSKVVPGEVLQDGIKNPTPRT 120

Query: 121 INVLSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVIVGYKDSSKVAQIVNKSIFDYVDQT 180
           +NVLSYLLE PGFKMTLAVEPGFSIPMCDTI VSVIVGYKDSSKVAQIVNKSIFDYVDQT
Sbjct: 121 VNVLSYLLEAPGFKMTLAVEPGFSIPMCDTISVSVIVGYKDSSKVAQIVNKSIFDYVDQT 180

Query: 181 SCRAFYFDYLNFPHLYPLASGIRVCISFLFLGNGNGDVAEVSGIVMDFSDVANTKEEVLC 240
           SCR FY+DYL+FPHLYPL SGIRVCISFLFLGNGNG VA+VSGIVMDFSDVA+TKEEVLC
Sbjct: 181 SCRVFYYDYLDFPHLYPLVSGIRVCISFLFLGNGNGGVADVSGIVMDFSDVAHTKEEVLC 240

Query: 241 LLERLDWK 249
           LL+ LDWK
Sbjct: 241 LLDLLDWK 248

[Close]
BLAST of Carg17625 vs. NCBI nr
Match: XP_022930578.1 (F-box protein At5g39250-like [Cucurbita moschata])

HSP 1 Score: 357.1 bits (915), Expect = 4.9e-95
Identity = 173/245 (70.61%), Postives = 200/245 (81.63%), Query Frame = 0 

Query: 4   EILNLVFPLLEDVDLASCMAVSREWRDVARDDYFWKCLCIKRWPSTYKMSNFPIGTYYKL 63
           E+LNL+FPLLEDVDLASCMAV ++WRD+ARDDY WKCLC K+WPS  K  N   GTYYKL
Sbjct: 5   EVLNLIFPLLEDVDLASCMAVCKQWRDIARDDYLWKCLCTKKWPSICKRPNI-YGTYYKL 64

Query: 64  YRNSYQCPNSRRLLSPRLSFDDLEFFIDIWSEGNLVFSKVVPGKVLQDGVKNPTPRTINV 123
           YRN Y+CP SR LL+PRLSFDDLEFFIDIW E  L+FS+VV G+VLQDG+KNPTPRT NV
Sbjct: 65  YRNLYECPKSRCLLTPRLSFDDLEFFIDIWCENTLLFSRVVSGEVLQDGLKNPTPRTHNV 124

Query: 124 LSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVIVGYKDSSKVAQIVNKSIFDYVDQTSCR 183
           LSYL EGPGFKMTLAVEPGFSI + DT+ VSV+V  K+S+KV Q+VNKS+FDY D+ S R
Sbjct: 125 LSYLQEGPGFKMTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGR 184

Query: 184 AFYFDYLNFPHLYPLASGIRVCISFLFLGNGNGD-VAEVSGIVMDFSDVANTKEEVLCLL 243
           AF FDYL+F HLYPL SGIR  +S LFL N   D V +V+GIVMDF DVA TK+EVL L 
Sbjct: 185 AFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAKTKDEVLWLF 244

Query: 244 ERLDW 248
           + L+W
Sbjct: 245 DLLNW 248

[Close]
BLAST of Carg17625 vs. NCBI nr
Match: XP_022979540.1 (F-box protein At5g39250-like [Cucurbita maxima])

HSP 1 Score: 354.4 bits (908), Expect = 3.2e-94
Identity = 173/244 (70.90%), Postives = 199/244 (81.56%), Query Frame = 0 

Query: 4   EILNLVFPLLEDVDLASCMAVSREWRDVARDDYFWKCLCIKRWPSTYKMSNFPIGTYYKL 63
           E+LNL+FPLLEDVDLASCMAV ++WRDVAR+DY WKCLC K+WPS  K  N    TYYKL
Sbjct: 5   EVLNLIFPLLEDVDLASCMAVCKQWRDVARNDYLWKCLCAKKWPSMCKRPNIS-RTYYKL 64

Query: 64  YRNSYQCPNSRRLLSPRLSFDDLEFFIDIWSEGNLVFSKVVPGKVLQDGVKNPTPRTINV 123
           YRN Y+ P SR LL+PRLSFDDLEFFIDIWS+  L+FS++V G+VLQDG+KNPT RT NV
Sbjct: 65  YRNLYERPKSRCLLTPRLSFDDLEFFIDIWSKNTLLFSRMVLGEVLQDGLKNPTSRTNNV 124

Query: 124 LSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVIVGYKDSSKVAQIVNKSIFDYVDQTSCR 183
           LSYL EGPGFKMTLAVEPGFSI + DT+ VSV+V  K+S+KVA IVNKSIFDY D+ SCR
Sbjct: 125 LSYLQEGPGFKMTLAVEPGFSISISDTMSVSVLVRCKNSNKVAHIVNKSIFDYFDKMSCR 184

Query: 184 AFYFDYLNFPHLYPLASGIRVCISFLFLGNGNGDVAEVSGIVMDFSDVANTKEEVLCLLE 243
           AF FDYL+F HLYP  SGIR  +S LFL N N  V +V+GIVMDF DVA TK+EVLCLL 
Sbjct: 185 AFCFDYLDFSHLYPFVSGIRAWVSLLFLDNENDGVVDVNGIVMDFCDVAKTKDEVLCLLY 244

Query: 244 RLDW 248
            L+W
Sbjct: 245 LLNW 247

[Close]
BLAST of Carg17625 vs. TAIR10
Match: AT5G39250.1 (F-box family protein)

HSP 1 Score: 255.4 bits (651), Expect = 3.7e-68
Identity = 128/249 (51.41%), Postives = 171/249 (68.67%), Query Frame = 0 

Query: 4   EILNLVFPLLEDVDLASCMAVSREWRDVARDDYFWKCLCIKRWPSTYKMSNFPIGTYYKL 63
           E+L  VFPLLE  DLASCM V ++WRD+ARDD++WKC C K+WPS  K    P  TYYK+
Sbjct: 5   EVLKNVFPLLEGEDLASCMGVCKQWRDIARDDFYWKCQCAKKWPSVCKRHKPPTETYYKM 64

Query: 64  YRNSYQCPNSRRLLSPRLSFDDLEFFIDIWSEGNLVFSKVVPGKVLQDGVKNPTPRTINV 123
           Y+   +   +R L  PRLSF++LEFFIDIWSE  LVFS ++PG  L++G++       NV
Sbjct: 65  YQTFSKRRLNRALPPPRLSFENLEFFIDIWSEERLVFSGLIPGVALENGIETLPLGISNV 124

Query: 124 LSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVIVGYKDSSKVAQIVNKSIFDYVDQTSCR 183
           L   L  P +KM +  EP F+IP+  ++ VSV+V   DS KVA+I+N+S+FDY+D++S R
Sbjct: 125 LRTHLGRPDYKMVVPAEPRFTIPLNQSVSVSVLVARNDSDKVARIINRSVFDYIDRSSYR 184

Query: 184 AFYFDYLNFPHLYPLASGIRVCISFLFLG----NGNGDVAEVSGIVMDFSDVANTKEEVL 243
           A  F+YL+    YP  SGIR  IS LF+     N +G + +V GI +DF+DVA+TKEEVL
Sbjct: 185 ALAFEYLDLSPCYPFISGIRAWISLLFMDVEDMNDDG-LLDVFGIQLDFNDVADTKEEVL 244

Query: 244 CLLERLDWK 249
            LL+ LDWK
Sbjct: 245 WLLDMLDWK 252

[Close]
BLAST of Carg17625 vs. Swiss-Prot
Match: sp|Q9FL82|FB270_ARATH (F-box protein At5g39250 OS=Arabidopsis thaliana OX=3702 GN=At5g39250 PE=2 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 6.6e-67
Identity = 128/249 (51.41%), Postives = 171/249 (68.67%), Query Frame = 0 

Query: 4   EILNLVFPLLEDVDLASCMAVSREWRDVARDDYFWKCLCIKRWPSTYKMSNFPIGTYYKL 63
           E+L  VFPLLE  DLASCM V ++WRD+ARDD++WKC C K+WPS  K    P  TYYK+
Sbjct: 5   EVLKNVFPLLEGEDLASCMGVCKQWRDIARDDFYWKCQCAKKWPSVCKRHKPPTETYYKM 64

Query: 64  YRNSYQCPNSRRLLSPRLSFDDLEFFIDIWSEGNLVFSKVVPGKVLQDGVKNPTPRTINV 123
           Y+   +   +R L  PRLSF++LEFFIDIWSE  LVFS ++PG  L++G++       NV
Sbjct: 65  YQTFSKRRLNRALPPPRLSFENLEFFIDIWSEERLVFSGLIPGVALENGIETLPLGISNV 124

Query: 124 LSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVIVGYKDSSKVAQIVNKSIFDYVDQTSCR 183
           L   L  P +KM +  EP F+IP+  ++ VSV+V   DS KVA+I+N+S+FDY+D++S R
Sbjct: 125 LRTHLGRPDYKMVVPAEPRFTIPLNQSVSVSVLVARNDSDKVARIINRSVFDYIDRSSYR 184

Query: 184 AFYFDYLNFPHLYPLASGIRVCISFLFLG----NGNGDVAEVSGIVMDFSDVANTKEEVL 243
           A  F+YL+    YP  SGIR  IS LF+     N +G + +V GI +DF+DVA+TKEEVL
Sbjct: 185 ALAFEYLDLSPCYPFISGIRAWISLLFMDVEDMNDDG-LLDVFGIQLDFNDVADTKEEVL 244

Query: 244 CLLERLDWK 249
            LL+ LDWK
Sbjct: 245 WLLDMLDWK 252

[Close]
BLAST of Carg17625 vs. TrEMBL
Match: tr|A0A1S3BL55|A0A1S3BL55_CUCME (F-box protein At5g39250 OS=Cucumis melo OX=3656 GN=LOC103490854 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.7e-91
Identity = 165/249 (66.27%), Postives = 198/249 (79.52%), Query Frame = 0 

Query: 1   MAW-EILNLVFPLLEDVDLASCMAVSREWRDVARDDYFWKCLCIKRWPSTYKMSNFPIGT 60
           M W E+L ++FPLLE VDLASCMAV ++WRD+ARDDYFWKCLC K+WPST K S+ P  T
Sbjct: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT 60

Query: 61  YYKLYRNSYQCPNSRRLLSPRLSFDDLEFFIDIWSEGNLVFSKVVPGKVLQDGVKNPTPR 120
           YYKLYRN Y+ PN+RRLL PRLSFDDLEFFIDIWSE  L+FS+ V G++LQ+G+K+P P 
Sbjct: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG 120

Query: 121 TINVLSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVIVGYKDSSKVAQIVNKSIFDYVDQ 180
           T NVLSY LE P FKMTL VEP FSIP+ + +  SV+VG KDS+KVA+IVNKS+FDY+D+
Sbjct: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSCRAFYFDYLNFPHLYPLASGIRVCISFLFLGNGNGDVAEVSGIVMDFSDVANTKEEVL 240
           TS RA  FDYL+F  L+P  SGIR  IS LF+ +GN    +V GIVMDF D ANTK+EVL
Sbjct: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL 240

Query: 241 CLLERLDWK 249
            LL+ LDWK
Sbjct: 241 WLLDLLDWK 249

[Close]
BLAST of Carg17625 vs. TrEMBL
Match: tr|A0A0A0L6S1|A0A0A0L6S1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017250 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 1.9e-90
Identity = 164/249 (65.86%), Postives = 197/249 (79.12%), Query Frame = 0 

Query: 1   MAW-EILNLVFPLLEDVDLASCMAVSREWRDVARDDYFWKCLCIKRWPSTYKMSNFPIGT 60
           M W EIL ++FPLLE VDLASCMAV ++WRD+A+DDYFWKCLC K+WPST K S+ P  T
Sbjct: 1   MTWEEILKVIFPLLEGVDLASCMAVCKQWRDIAQDDYFWKCLCAKKWPSTCKTSHPPTDT 60

Query: 61  YYKLYRNSYQCPNSRRLLSPRLSFDDLEFFIDIWSEGNLVFSKVVPGKVLQDGVKNPTPR 120
           YYKLYRN Y+ PN+RRLL PRLSFDDLEFFIDIWSE  L+FS+VV G + Q+G+KNP P 
Sbjct: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGGIFQNGMKNPPPS 120

Query: 121 TINVLSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVIVGYKDSSKVAQIVNKSIFDYVDQ 180
           T N+LSY LE P FKMTL VEP FSIP+ +T+  SV+VG KDS+KVA+IVNKS+FDY+D+
Sbjct: 121 TGNLLSYHLEVPEFKMTLTVEPRFSIPISNTVSASVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSCRAFYFDYLNFPHLYPLASGIRVCISFLFLGNGNGDVAEVSGIVMDFSDVANTKEEVL 240
           TS RA  FDYL+F   +P  SGIR  IS LF+ +G+    +V GIVMDF D ANTK+EVL
Sbjct: 181 TSYRALAFDYLDFSPFHPFVSGIRAWISLLFMDDGDDGAIDVFGIVMDFCDAANTKDEVL 240

Query: 241 CLLERLDWK 249
            LL+ LDWK
Sbjct: 241 WLLDLLDWK 249

[Close]
BLAST of Carg17625 vs. TrEMBL
Match: tr|A0A2P4LM64|A0A2P4LM64_QUESU (F-box protein OS=Quercus suber OX=58331 GN=CFP56_44682 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 4.4e-84
Identity = 151/245 (61.63%), Postives = 188/245 (76.73%), Query Frame = 0 

Query: 4   EILNLVFPLLEDVDLASCMAVSREWRDVARDDYFWKCLCIKRWPSTYKMSNFPIGTYYKL 63
           E+L  VFPLL+ VDLASCMAVS++WRD+ARDDYFWKC+C KRWPS  K  N P  T+YKL
Sbjct: 8   EVLKAVFPLLDGVDLASCMAVSKQWRDIARDDYFWKCVCAKRWPSICKRPNPPTLTFYKL 67

Query: 64  YRNSYQCPNSRRLLSPRLSFDDLEFFIDIWSEGNLVFSKVVPGKVLQDGVKNPTPRTINV 123
           Y+  Y+  N R LL PRLSFDDLEFFIDIW+EG L+FS+VVPG VLQ G+K P P   ++
Sbjct: 68  YQTFYKRQNRRTLLPPRLSFDDLEFFIDIWTEGRLIFSEVVPGPVLQAGIKIPPPGICDM 127

Query: 124 LSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVIVGYKDSSKVAQIVNKSIFDYVDQTSCR 183
           L + LEGP +KMTL VEP F++P+C  + VSV+VG KDS++VA I+NKS+FDY+D+T+ R
Sbjct: 128 LRFHLEGPEYKMTLPVEPRFTVPICQPVSVSVLVGRKDSNRVACIINKSLFDYIDRTAYR 187

Query: 184 AFYFDYLNFPHLYPLASGIRVCISFLFLGNGNGDVAEVSGIVMDFSDVANTKEEVLCLLE 243
           A  FDYL+F   YP  SGIR  IS LF+ +GN  V +V G+ MDF D AN+K+EVL LL+
Sbjct: 188 ALAFDYLDFSPDYPFISGIRAWISLLFMDDGNDGVIDVFGVEMDFCDAANSKDEVLWLLD 247

Query: 244 RLDWK 249
            LDWK
Sbjct: 248 MLDWK 252

[Close]
BLAST of Carg17625 vs. TrEMBL
Match: tr|A0A1R3ITJ7|A0A1R3ITJ7_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_21402 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.5e-79
Identity = 145/245 (59.18%), Postives = 182/245 (74.29%), Query Frame = 0 

Query: 4   EILNLVFPLLEDVDLASCMAVSREWRDVARDDYFWKCLCIKRWPSTYKMSNFPIGTYYKL 63
           E+L LVFP+L+  DLA+CM V ++WRD+ARDDYFWKC+C K+WPS  K  N P  TYYKL
Sbjct: 5   EVLKLVFPILDGTDLAACMVVCKQWRDIARDDYFWKCVCAKKWPSICKRPNPPTVTYYKL 64

Query: 64  YRNSYQCPNSRRLLSPRLSFDDLEFFIDIWSEGNLVFSKVVPGKVLQDGVKNPTPRTINV 123
           Y+  Y+  + R LL PRLSFDDLEFFIDIW+E  L+FS+VVPG VLQ G+K P     ++
Sbjct: 65  YQTFYKRQHQRTLLPPRLSFDDLEFFIDIWAEDKLIFSEVVPGPVLQTGIKIPPTGISDM 124

Query: 124 LSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVIVGYKDSSKVAQIVNKSIFDYVDQTSCR 183
           L + LEGP +KM L VEP F++P   T+ VSV+VG KDS+KVA I+NKS+FDY+D+++ R
Sbjct: 125 LKFHLEGPEYKMILPVEPRFTVPWSQTMSVSVLVGRKDSNKVACIINKSLFDYIDRSAYR 184

Query: 184 AFYFDYLNFPHLYPLASGIRVCISFLFLGNGNGDVAEVSGIVMDFSDVANTKEEVLCLLE 243
           A  FDYL+F   YP  SGIR  IS LF+ +GN  V +V GI MDF D AN+KEEVL LL+
Sbjct: 185 ALAFDYLDFSPNYPFISGIRAWISLLFMDDGNDGVMDVFGIEMDFCDAANSKEEVLWLLD 244

Query: 244 RLDWK 249
            LDWK
Sbjct: 245 MLDWK 249

[Close]
BLAST of Carg17625 vs. TrEMBL
Match: tr|A0A1R3HSV7|A0A1R3HSV7_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_17365 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 3.3e-79
Identity = 144/245 (58.78%), Postives = 182/245 (74.29%), Query Frame = 0 

Query: 4   EILNLVFPLLEDVDLASCMAVSREWRDVARDDYFWKCLCIKRWPSTYKMSNFPIGTYYKL 63
           E+L LVFP+L+  DLA+CM VS++WRD+ARDDY WKC+C K+WPS  K  N P  TYYKL
Sbjct: 5   EVLKLVFPILDGTDLAACMVVSKQWRDIARDDYLWKCVCAKKWPSICKRPNPPTVTYYKL 64

Query: 64  YRNSYQCPNSRRLLSPRLSFDDLEFFIDIWSEGNLVFSKVVPGKVLQDGVKNPTPRTINV 123
           Y+  Y+  + R LL PRLSFDDLEFFIDIW+E  L+FS+VVPG VLQ G+K P     ++
Sbjct: 65  YQTFYKRQHQRTLLPPRLSFDDLEFFIDIWAEDKLIFSEVVPGPVLQTGIKIPPTGISDM 124

Query: 124 LSYLLEGPGFKMTLAVEPGFSIPMCDTIGVSVIVGYKDSSKVAQIVNKSIFDYVDQTSCR 183
           L + LEGP ++M L VEP F++P   T+ VSV+VG KDS+KVA I+NKS+FDY+D+++ R
Sbjct: 125 LKFHLEGPEYQMILPVEPRFTVPWSQTVSVSVLVGRKDSNKVACIINKSLFDYIDRSAYR 184

Query: 184 AFYFDYLNFPHLYPLASGIRVCISFLFLGNGNGDVAEVSGIVMDFSDVANTKEEVLCLLE 243
           A  FDYL+F   YP  SGIR  IS LF+ +GN  V +V GI MDF D AN+KEEVL LL+
Sbjct: 185 ALAFDYLDFSPNYPFISGIRAWISLLFMDDGNDGVMDVFGIEMDFCDAANSKEEVLWLLD 244

Query: 244 RLDWK 249
            LDWK
Sbjct: 245 MLDWK 249

The following BLAST results are available for this feature:
BLAST of Carg17625 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022951059.16.4e-14399.60F-box protein At5g39250-like [Cucurbita moschata][more]
XP_023536935.19.5e-13192.68F-box protein At5g39250-like [Cucurbita pepo subsp. pepo][more]
XP_023001983.11.1e-12989.11F-box protein At5g39250-like [Cucurbita maxima][more]
XP_022930578.14.9e-9570.61F-box protein At5g39250-like [Cucurbita moschata][more]
XP_022979540.13.2e-9470.90F-box protein At5g39250-like [Cucurbita maxima][more]
BLAST of Carg17625 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G39250.13.7e-6851.41F-box family protein[more]
BLAST of Carg17625 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FL82|FB270_ARATH6.6e-6751.41F-box protein At5g39250 OS=Arabidopsis thaliana OX=3702 GN=At5g39250 PE=2 SV=1[more]
BLAST of Carg17625 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BL55|A0A1S3BL55_CUCME1.7e-9166.27F-box protein At5g39250 OS=Cucumis melo OX=3656 GN=LOC103490854 PE=4 SV=1[more]
tr|A0A0A0L6S1|A0A0A0L6S1_CUCSA1.9e-9065.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017250 PE=4 SV=1[more]
tr|A0A2P4LM64|A0A2P4LM64_QUESU4.4e-8461.63F-box protein OS=Quercus suber OX=58331 GN=CFP56_44682 PE=4 SV=1[more]
tr|A0A1R3ITJ7|A0A1R3ITJ7_9ROSI1.5e-7959.18Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_21402 PE=4 SV=1[more]
tr|A0A1R3HSV7|A0A1R3HSV7_COCAP3.3e-7958.78Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_17365 PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf
IPR001810F-box_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17625-RACarg17625-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 1..41
e-value: 1.8E-4
score: 30.9
IPR001810F-box domainPFAMPF12937F-box-likecoord: 4..44
e-value: 4.4E-9
score: 36.0
IPR001810F-box domainPROSITEPS50181FBOXcoord: 1..41
score: 9.021
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 1..72
e-value: 3.6E-9
score: 38.4
NoneNo IPR availablePANTHERPTHR20995FAMILY NOT NAMEDcoord: 4..191
NoneNo IPR availablePANTHERPTHR20995:SF25F-BOX ONLY PROTEIN 15coord: 4..191
IPR036047F-box-like domain superfamilySUPERFAMILYSSF81383F-box domaincoord: 3..72