Cp4.1LG07g02280 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG07g02280
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Tocopherol cyclase
Location	Cp4.1LG07 : 1419677 .. 1429454 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTGGGCTCCGTTTGATCAACAAGGATAGGTATTTCATATAGTGGGCTCCGCCGTTTGACACTTGCCATCCACCGGACGTCCTTGTTAGATAGTAGCAGCAAGGCACGGCACGGCAGCGCTGGTCGTAGGACGAGAGTGAACACAATAGACTTAATTTGTCTGCGAGTAGTTATTGATAGAGATTTATTTGTTCTTTTATCTCATCTAAATCTTAATATTGACCGGACTAAGGTGATCCTGCGACTGTGATTCAGTTTCTTCAGGCCCCTCGCAATTCATCCTTGCCATGCAGGCAGATTTTGATCCACAAAATTATATATAGTGCACGACTCTCGCCCGAATTCATCTTGTTCCATTTTTTGGCAATTGAGATGGATGCAACTGCTTGCAATCTACCGTTGTGTGGAATTCATCACTTCTACTCCAATTCAATGGAAGTTCAAGCTGGAAAGTCCATGTTCGCGGTGAAGGTTCCTCAATCTTTGAAGTCCAGCTCATTTCGTCGTCGATGGGGCGGTTCTTCGAAGCTAAAGTTGAAATCAAGATCGAGCATCCGAGTATTGGCTTCCAGTTCGAACTCTGTGTATGAATCTTCTGCGTCGGCGAAAATTGAGAAAGATAATGACGGAGGTCTTGTTTGCCCTCCTGGCTATCAGCCCACGCCTGCTAATCGCGAGCTGCGGACTCCTCACAGCGGGTAAAACGCTGTCTAAATTTTCCATTAACGAAGGTTCACATCTAGCATAAATGTCCTAGTTCCTAATTTCTTGCCACTGCTCACTTGAATGGTTGAGGCGGCTTCACTAATTGGTTGCATGTATCTGTGAACCCCTCATTGTTTTGTATCTGTGCATACTGTTATCTGTATTAATCTTCAATTAAATGCCCTGTGGTCACCATCAACATTCAGGTTCCGTCTCACGAATTGTTTGTTCATCCTCTGTTTTGTAACCAATAACCAACAAATGCTAGAGATACAACAAGTATTCAAAACAAGTTATGTAAGGCTTAAAGGGAGCTTATCTCCTCTGATGTAGCAGAAGGGAAGCACCAATTAATGAGTACTATGAGCTGTGCTAAAAGATGGCATAGAAAAATGGAGCAAAAAGTGGAGGAAAGATAGNTTGAAGGAAATGTAGAATGAGAGAGCAAAAAATCAATCAACTATGATTGGAGCGAGTGTGGACGAGTGGAGGAGACGAGCTATGCTATCGAGGGGATTATNGTGGAGGAAAGATAGAATGAGAGAGCAAAAAATCAGTCGACTATGATTGGAGCGAGTGGACGAGTGGAGGAGACGAGCTATGCTATCGAGGGGATTATAGAGAAGGCTCCTGAAACAGTAATCAAGTGTGTGAAGATGAGTGAAAGAGAACTAGAAAGATGTGGACTGAGAGTAGCGGGAGTGGAAGATTTGGGAAAACTGGGAAGATGCTGGAGCTATTGAAGAATTGAAGAAAGAATGATTAAAGTAGTATATTTGTACCTTTAAAGATGAGTTAACTGGTCATAACTCACCAAACTTGAAAGATAAAAGGTTGTTAATGATTTTTTTTTTTCCTTTTTATCCTTCCTTCTGGAGCATTTGAACCCGGTGTAACCTTATTTTTGTTATGTCATCTGAGGTGAATTGTTTCTCATTTTTAGATCATGGCTGCATCATGGTTGATCTCATTATATATGGTTATGTGGCAATCAATGATTTACATTTTCCAATTTTCTGTACTTCGTATTGAATCAGGTATCACTTTGATGGGAGTACTCGGAAATTCTTTGAAGGTTGGTACTTCAAGGTATCAATTCCACAGAAGAGGCAGAGTTTCTGTTTCATGTACTCTGTGGAGAACCCTGCATTTCCTAAGAAATTAACGACACCCGAAATCGTACAACATGGACCTAGGTTTACAGGAGTTGGAGCACAGATTCTTGGTGCTTATGACAAATACATATGCCAATACTCTGAAGAGTCTCAGAACTTTTGGGGAAGTAAGTTTTGATATCAAACCTATCTTCTTTTCTTAGTTCTCGTTTACAATGATTCCTTAGTGAGCTCAATTCTTTGACAAAAATATGAGTGGATAAAAACTTCCATATATTTGCTGTTCTATCAATGCCTTGCCTTATGGATCTACTGCTGCTAACTTTATGTTCAAACATTATTTAATACACGAAATTATGAAACGACATTCCCCCTCCTCCATACAAAACATAATCACTGCCAGTTGGAATTTAAAACAAAACACTTCTTTCTTGGTTGTCTTGTAATGTGCATAATAACATATATATCTTCATTGTTCGGTAATTGCTCTATTTTTTTTCTTTTGGTAATTAATTTGGATTTTGAATCAAATTTTTGTTTCGACTGAAGTCAGAAAATTTTCCACCAACCTTTTTTGGTCTGATTAAGTATCTAAGGATTTCAGCAAATACACATTTAACTACCGTGCTATTGCATGGCCTTGTCATTCCAATTTTTCCATCATGCATATTTGTTTCAGGAGTGATATTTGGTTAGAGACCTCTGTTTCCTACTTTGCACCTCTTTCTTTTGGCCTGTTGTCCCTCTAGTCACTTTGGCCTTTGTCCTCTTGGTTGTCCTCAGGCTGCTGAGAGAAATATTCTTGAGAAGGAATTGGATGAGTTGTTTCTTTGCTTGGTATACTTAAGATGATTGCTATCAGTCATAATTGAAGGAATTGGAGTGTGTTGGTGAAAATTTTGATTCCTCAAATATCTTGTGGGTAAGGGGAGAATTTTATTCTTGTGACTTTATTGAAAGATTTGTATCTTTATGTGCCTATAGTCGTAATTTTGTGATCNAAATTATGAAACGACATTCCCCCTCCTCCATACAAAACATAATCACTGCCAGTTGGAATTTTAAACAAAACACTTCTTTCTTGGTTGTCTTGTAATGTGCATAATAACATATATATCTTCATTGTTCGGTAATTGCTATATTTTTTTCTTTTGGTAATTAATTTGGATTTTGAATCAAATTTTTGTTTCGACTGAAGTCAGAAAATTTTCCACCAACCTTTTTCGGTCTGATTAAGTATCTAAGGATTTCAGCAAATACACATTTAACTACCGTGCTATTGCATGGCCTTGTCATTCCAATTTTTCCATCATGCATATTTGTTTCAGGAGTGATATTTGGTTAGAGACCTCTGTTTCCTACTTTGCACCTCTTTCTTTTGGCCTGTTGTCCCTCTAGTCACTTTGGCCTTTGTCCTCTTGGTTGTCCTCAGGCTGCTGAGAGAAATATTCTTGAGAAGGAATTGGATGAGTTGTTTCTTTGCTTGGTATACTTAAGATGATTGCTATCAGTCATAATTGAAGGAATTGGAGTGTGTTGGTGAAAATTTTGATTCCTCAAATATCTTGTGGGTAAGGGGAGAATTTTATTCTTGTGACTTTATTGAAAGATTTGTATCTTTATGTGCCTATAGTCGTAATTTTGTGATCACCTCTGTCAGAAGGTCTGTAATGGACTACTTATGGATTTGCCTACTTCATGTCAGTCTTTCCTATGCCCAGAAAAGTTTTATTATTTTTATTTTTTATTTTTCTAATGTTATATTTTTATAAAAAACTTGGATGTATTACAAAAGAGAACAAAACAACCTAAGAGCGGGGAAGAGGGATCCCCCACCCAAAAAACTAGCAGTCATTGGTGATTAAAACACCACAGTAGAGGTGAGCTGTACATTTCTACAAAAAGAAATATCGAAAGTAGAAGCCTTATTCTCAAAAGTTCTTTGATTCCTTTCCAACTAATTATGTCCTTTGATTCTCAGAAAACATTTTTAAAAGAGGTCTCAACCTCTTTATACAGGCTATGGTTTTCAGATATCTTATTCATGTATTTTTTTAAAAAAATGACGACTAATGCTGGGGTTTTAATGCATAGGTAGGCATGAACTGAGTCTGGGCAACTGTTTTGCATCTAAAGGAGGGTTTAAGCCTCCAAACAAGGAAGTTCATCCAGAGGTTGAGATGCTTTCTTAGAATGTATTGTTTCATTTAATGTTGAGACTTCGTCTTTTCTCTCTCTCTCATAGTCTTATATAAGTTCAATTAATTCATGAATGATTTGTGTATCTTTTTCGAGAGAAAATTTGTCAGATTGGAATCTCTTCTTGCTTCAACTATTATTGTTTTTGACAGAGGTTGTGAATGACTTTATATTATATTGTGGGCAACCGTTTTTAGGAGTTCAATAAAAAGGTCGTGGAAGGTTTTCAAGTCACTCCACTTTGGCATCAAGGATTTATTCGTGATGATGGCAGGTGCTCCCTCGCTTTTACTTTATTGAGCTTTTAGTACTGTGTTGAGAATCTTTAACTTCAGTTTTTGACCTTAAGATGGCTTCAGTTAAAGTTGAATGCTAATATCTCATGTGGAGTAGCCCCAAGGGGCAGCTCTGTGGGTGAAGGCTCGCAGTCTCTAAGGAACACTTATCTTACACTAATTCATCACTGCAGTCTCTACACTTATTCGTCCCCATATTTTAGAGCTTTTGTGGCTTCTTTAGATCATATACATACTCCTAACACAGTTCAAGAAGCAAACTTTTATGTAAAGCCGCCACTCTAGAAGTACATTCTCTTGGAAAAAATAAATGTGAATCCTATGGATGCAGTTGGATACAGATGGATTTTTTCAACCAATCACAAACCAAATGGTAGTATAGAGCCATTCAAAACTTGTCTTATAGCCAAACTTTTGGAATCTGACTATAAGGAAACATTTGTTCCTGTTGTGAAATGAAATTCTATTCAATTACTTCTCGCTATTACAATAAATCTAGATTTATCATTAATTCAACTTGATGTAAAAAAATTTCATTTTTGAATAGAGACCTAGTGAAGAAGTGATTATGAGCCTATATCTTGGATTTGAGGACATATATACTCCGGAAAGATATGTAAACTGAAGAAATATATGGATTAAAAGTCATCTCAAGCTTAGTTCAAAAAGTTTACAAACGCATTGAAGTAAGATGACTATACTCAATATTAATCCAATCAAGCCCTATTCATCAAGCATTTTTCAACAAGTAAGATTACTGCCTTCAGAGTATATGTTGATGTTATTATTTTTACAAGAAATGTTCTAGAGGAAATTATTCGGCTCAAGCAAATTCTTTCAAATAAATTTGAAATCAAGACTTGACCAGTAGGAAAAGTTATTTACTTAACTCATACTTGTCCAAACATTAGCTTGGCTGTTAATGTGAACAAACCTTCTAAAAATCATATAGAAGTTTTGTATAGAATATTGAGATATTCAGGAAAGAGCCTCATGTTTCTAAAGCTGAGTTTGGGGAGGTGCTCTTATTGACTGCCAGTCAACTTCACGGTAGTGCTCATATGTGTGGGGGAAACTTAGTAACTTGGTGCAGTAAGAAGCAACAGGTTGTAGCTCAAAGTAGTCTTAAAGATNGTTAAAGCTGAGTTTCAATCCTTAGCTCATGGAATTTGGTTAAAGTGCCTANCTTAAAGATGAGTTTCAATCCTTAGCTCATGGAATTTGGTTAAAGTGCCTACTCATCGAGCTCAAAGTCAAAATAGTAGGTATCATAGAGCTAATGTGTGATAATCAGTCTGTCATAGCTATTGAAAAAAATCTAATATTTCATGATCCAATGAAGCATGTTGAGATAGACTGCCACTTCATTAGTGATAAGATTGATAACAACACAATAAACCTAAGATATGTGCCTTCACAACAACAATTGAATTGGTCAAGCCTTGATGATTATGTTTCCAAGCTAGGAGTGACTAGCATATACCGTCTAGCTCAAGGGGAGCATAGATAATCAACCTGTAAATTTAATATTTTATTTATTGTCTTATATATTTGTGTAGCTGTATTTTCTCCTTCCTTTTTAGGCTTGGGCTGATTACTGAATTTCTTATTTTGGAGTTTTCTGATTGAAATCCTTCTTGTATAAATCTCAATCTATTTCGTTGAATAAAAAATAAGCAAAATTGTTTTAATACATAGCTTCAGTAACTTAGGGAAGAACTGCAGCATTTGGGCAGTGAAGCCTTCTTCCGTTTAAAGGACATACTTCTAAAATATTCAGTCTAGAACTGACACAACAATTCCTTCTCGCAGTGAAAAAGTTATGTATAAAGCTAGTTTTAGCCATAGCCTTTCTCAAACCACCTCATTTTGACGTTTGTCTTTTTCTGGAATTCTCATTCGACATGATTTCTTCCAGTAAAATGTAGAGGCTTTTCCTAACTTCTTTTTGAGGTTGGGAACGGCCAAATGCATGAGCATCAATTTCTTAGTGTTTCGACATCAATACAATGCAATGTGGTACCAAGTTATCTTAATTCATGAAAGTGCTCCCCTTTCAGGTTTAATCTATGAGTTCTATGTTAAAAGAACTTGTTAATAATTTTATAAAATAATCTTATTTGTTATTATGAGTTATGGTATTACCAATCTTTGAATCTTCTCTGCTTACTGGGAAGAAAAGATTTAAGTTATTCAATCAACAGGAGCCTGGATTTCCTTGAACTAAATGTGTTTTAGGGCTTCAAATCAGTATATCAAGGAGCTGGAAATATTGGTTGTCAAATTTCTCTTTGCATTTAAACAATTGTATCTTTGATTCCATCTTATTATTGGTACACTGTTTGACAGCGTTCAATGACAGGACAAACTATTTGGAAACTGTAAAAACTGCTCGTTGGGAATACAGTACCCGCCCAGTTTATGGCTGGGGAAATGTTGGATCTAAGCAGAAGTCAACAGCTGGCTGGCTTGCAGCATTTCCAGTATTTGAGCCTCATTGGCAAATATGCATGGCAGGCGGGTTATCAACAGGCATGTTCAATCTTTTAATCAGTTTACCTTGGAAATTTGTGTTTGACTTGGTGCATTACTTCTAATCATGAGAAATTCTATACTTAGCACCGTGCTGGTGCTGGATTTATGTTGAAGAATCGATAACTATATATTTTTATGGTATGAGGATTCTGTTATGGTTCTAAATTAATATGTAATGGAAATATTGTTTCATATCAGGCTGCGCTTTCACCCTAATTTTATTTTCTTGGAAAAAGTTTAAAGTTCGACATATTTCCTGAATTTCTCAATATGAATCGCAGGTTGGATTGAGTGGGAGGACGAAAGGTTTGAGTTTGTAAATGCCCCTTCATACTCTGAAAAGAATTGGGGTGGAGGATTTCCCAGAAAATGGTTTTGGGTAAATTTTTTGGCTTTGTAAAGCAAGAAATTATTTGATTCTTTCTATATTGTACAAATTTGAAGTCGAGCATGCTATGCAATATGGGCTAGTTAAAAAATGAGGTTAAAAGAGGGTTGAGTTTTGGAGTACTTAAATTTGGACAAGAAACCTAGGATCGTGAATCTTGTTAGAAAATTCATAAAAGGATGTCAATAAATTTAACTTTTAGAAATTGAGTTTGCTTTTGACCGGCCCATGCATAGAGGAGTTTCATCTGTTTTTTACCTTCATGAGGCCGTAAAAGATTACGCCATCTGTATATTTAATGGGATGAACTATGCGATATTTTCTTGCATATTTACGTAGTATATTGCTGGACCTTGTTGCTCGACTGACTCAAAACATTTTTAAACCTTAGCTCCTTTTAACATGCTGCAGGCTCAGTGTAATGTTTTTGAAGGTGCTCGTGGAGAAGTTTCTCTTACGGCTGGTGGAGGTTTGAGACAACTTCCTGGATTGACGGAAACCTTTGAAAATGCTGCATTGGTAATATTATGTGGCTCCTCATTGCGATTTCACTCTCTTTACTCTCTCTCATTCACACACACACGCACTGCATTGTTGCGAATGAAATGGTCTCCCCCAACACCCCAAATGCTGTGGACCTACGAACGTGATCCACTCTCTTTATACTTGGAGAGAGACGGTCTTACTTTGAATAGGATTGTTCTATAGGTTGTACAACTTTGTCCTAGAGTTCTCAAAGAGAGAAGGGGTGGGGGGAATGTGAGATCCCACATTGATTGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGAAGACGCGTTTTAAAACCTTGAGGGGAAGCTCAAAAGGAAAAGCCCAAAGAGGACAATATCCGCTAGCGGTGGGTTTGGGCCAAAGCTAGACACTGGGCGATGTGCCAGCAAAGACATTGAGTCCTGAAGGGGGATGGATTGTGAGATCCCACATCAGTTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAACCCTCTCCCTAGCATACGCGTTTTAAAACCTTGAGGGGAAGCCCAAAAGGAAAAACCCAAAAAGGAGCGGTGGACTTGGGCCGTTAAGGGCCGTTAAAGTTGTGGATGGATGGAATTATGCTTGGAAAGGTAGGAAATGTGGGAGTTGGGTGGACATCTTAACCAACAATGATATTTGTGATATTTTAATTGTTGCAGGTTGGAGTCCACTACGATGGAATTTTTTATGAATTCGTGCCATGGAATGGAACTGTTAACTGGGAAATAAGTTCTTGGGGCTATTGGTATATTGCTGCCGAAAATGCAACGCACAAGGTAAATTGTGGATCTCTTAGTTCCAGTTACTGCCCTTCTTTGAGCAATTATAAGATTTCCATCTGATGGATGCAAAAGACTTGATTCTGTTGAAATAGTCTTTTAGCAAGTAAATAGTAATGTTAAAGGCATACTAACAACCTCGGCGAGGTTAGCTCAATTGATTAAGATACACGGATGAGGTTTAAATTCTCCACCCCACGCGTTTACTCTTGAAAGAATAATGATAAAGCATATCAAAATGGTCTAAAAATGCTTTAAAGCGTTTCCTTTGAAAGCCAGAAAATTATGCAAAAGTGAAGATTTTCTTCAAGTATTTTAGCTCGTGTTTGCACAGATTGAATTAGAAGCCAAAACAGACGAGCCTGGTTCACCGTTACGTGCTCCTACAACGGAACGTGGGCTTGACACAGCTTGCAAAGATACTTGTTTTGGTATCTTGAAATTGCAAATGTGGGAACGAAGATTTGATGGCAGCAAGGGCAAGGTGACAGTCTTATATTAACTTGTTTCCATTACTCATTGCTTCCGTTTGGCTTGCACTTACTTTTCATATTTGTATCTAATAGAGTCTTAGCATATTGTGTCGAGTTTGTGAATTTTTTTAAAAAAAATGTTAAATAGGTCAATGACCTATTCGACCTAAAATTAAAAATTCAGAGATCTATTGGATATAAAATTCAAAGTTTAAGGATCTACGATACTCTTTTTAAAGTTTTAAAGTTGAAGGATGAGGACCTATTAGGCTCAAACTCAAAACTTAAGAATTTTTTTAATGCACACATGCATGTATACAAGCATAACACGTAGTCAGTGACGTTACTGCCCTATGACCTGATCATTCTTCAGGAGGTCTTCATACTAGTTATAAATCCCGATAGTGATTAAAATATCGTGTTAGTATTGGTGTAGATTATTTTCTGCAGAATATTTTCCGAACTCTTAGTGGTATATGACAATTGTTCAGGTTAACCTGCTCTTCATTTTCAATAGTTATATCAGTACAATTCTTGATTTGCAGATTGTATTGGATGTCACAAGTAACATGGCGGCATTGGAAGTTGGAGGAGGGCCTTGGTTTAACACCTGGAAGGGAGAAACTACCACCCCGGAGATCCTCAAGCGTGCTCTTACAACACCTATTGATGTGGAACAAGCTTTTAACTTGCTTCCACTCTTCAAACCTCCTGGCTTGTAG

mRNA sequence

AGTGGGCTCCGTTTGATCAACAAGGATAGGTATTTCATATAGTGGGCTCCGCCGTTTGACACTTGCCATCCACCGGACGTCCTTGTTAGATAGTAGCAGCAAGGCACGGCACGGCAGCGCTGGTCGTAGGACGAGAGTGAACACAATAGACTTAATTTGTCTGCGAGTAGTTATTGATAGAGATTTATTTGTTCTTTTATCTCATCTAAATCTTAATATTGACCGGACTAAGGTGATCCTGCGACTGTGATTCAGTTTCTTCAGGCCCCTCGCAATTCATCCTTGCCATGCAGGCAGATTTTGATCCACAAAATTATATATAGTGCACGACTCTCGCCCGAATTCATCTTGTTCCATTTTTTGGCAATTGAGATGGATGCAACTGCTTGCAATCTACCGTTGTGTGGAATTCATCACTTCTACTCCAATTCAATGGAAGTTCAAGCTGGAAAGTCCATGTTCGCGGTGAAGGTTCCTCAATCTTTGAAGTCCAGCTCATTTCGTCGTCGATGGGGCGGTTCTTCGAAGCTAAAGTTGAAATCAAGATCGAGCATCCGAGTATTGGCTTCCAGTTCGAACTCTGTGTATGAATCTTCTGCGTCGGCGAAAATTGAGAAAGATAATGACGGAGGTCTTGTTTGCCCTCCTGGCTATCAGCCCACGCCTGCTAATCGCGAGCTGCGGACTCCTCACAGCGGGTATCACTTTGATGGGAGTACTCGGAAATTCTTTGAAGGTTGGTACTTCAAGGTATCAATTCCACAGAAGAGGCAGAGTTTCTGTTTCATGTACTCTGTGGAGAACCCTGCATTTCCTAAGAAATTAACGACACCCGAAATCGTACAACATGGACCTAGGTTTACAGGAGTTGGAGCACAGATTCTTGGTGCTTATGACAAATACATATGCCAATACTCTGAAGAGTCTCAGAACTTTTGGGGAAGTAGGCATGAACTGAGTCTGGGCAACTGTTTTGCATCTAAAGGAGGGTTTAAGCCTCCAAACAAGGAAGTTCATCCAGAGGAGTTCAATAAAAAGGTCGTGGAAGGTTTTCAAGTCACTCCACTTTGGCATCAAGGATTTATTCGTGATGATGGCAGGACAAACTATTTGGAAACTGTAAAAACTGCTCGTTGGGAATACAGTACCCGCCCAGTTTATGGCTGGGGAAATGTTGGATCTAAGCAGAAGTCAACAGCTGGCTGGCTTGCAGCATTTCCAGTATTTGAGCCTCATTGGCAAATATGCATGGCAGGCGGGTTATCAACAGGCATGTTCAATCTTTTAATCAGTTGGATTGAGTGGGAGGACGAAAGGTTTGAGTTTGTAAATGCCCCTTCATACTCTGAAAAGAATTGGGGTGGAGGATTTCCCAGAAAATGGTTTTGGGCTCAGTGTAATGTTTTTGAAGGTGCTCGTGGAGAAGTTTCTCTTACGGCTGGTGGAGGTTTGAGACAACTTCCTGGATTGACGGAAACCTTTGAAAATGCTGCATTGGTTGGAGTCCACTACGATGGAATTTTTTATGAATTCGTGCCATGGAATGGAACTGTTAACTGGGAAATAAGTTCTTGGGGCTATTGGTATATTGCTGCCGAAAATGCAACGCACAAGATTGAATTAGAAGCCAAAACAGACGAGCCTGGTTCACCGTTACGTGCTCCTACAACGGAACGTGGGCTTGACACAGCTTGCAAAGATACTTGTTTTGGTATCTTGAAATTGCAAATGTGGGAACGAAGATTTGATGGCAGCAAGGGCAAGGTTAACCTGCTCTTCATTTTCAATAGTTATATCAGTACAATTCTTGATTTGCAGATTGTATTGGATGTCACAAGTAACATGGCGGCATTGGAAGTTGGAGGAGGGCCTTGGTTTAACACCTGGAAGGGAGAAACTACCACCCCGGAGATCCTCAAGCGTGCTCTTACAACACCTATTGATGTGGAACAAGCTTTTAACTTGCTTCCACTCTTCAAACCTCCTGGCTTGTAG

Coding sequence (CDS)

ATGGATGCAACTGCTTGCAATCTACCGTTGTGTGGAATTCATCACTTCTACTCCAATTCAATGGAAGTTCAAGCTGGAAAGTCCATGTTCGCGGTGAAGGTTCCTCAATCTTTGAAGTCCAGCTCATTTCGTCGTCGATGGGGCGGTTCTTCGAAGCTAAAGTTGAAATCAAGATCGAGCATCCGAGTATTGGCTTCCAGTTCGAACTCTGTGTATGAATCTTCTGCGTCGGCGAAAATTGAGAAAGATAATGACGGAGGTCTTGTTTGCCCTCCTGGCTATCAGCCCACGCCTGCTAATCGCGAGCTGCGGACTCCTCACAGCGGGTATCACTTTGATGGGAGTACTCGGAAATTCTTTGAAGGTTGGTACTTCAAGGTATCAATTCCACAGAAGAGGCAGAGTTTCTGTTTCATGTACTCTGTGGAGAACCCTGCATTTCCTAAGAAATTAACGACACCCGAAATCGTACAACATGGACCTAGGTTTACAGGAGTTGGAGCACAGATTCTTGGTGCTTATGACAAATACATATGCCAATACTCTGAAGAGTCTCAGAACTTTTGGGGAAGTAGGCATGAACTGAGTCTGGGCAACTGTTTTGCATCTAAAGGAGGGTTTAAGCCTCCAAACAAGGAAGTTCATCCAGAGGAGTTCAATAAAAAGGTCGTGGAAGGTTTTCAAGTCACTCCACTTTGGCATCAAGGATTTATTCGTGATGATGGCAGGACAAACTATTTGGAAACTGTAAAAACTGCTCGTTGGGAATACAGTACCCGCCCAGTTTATGGCTGGGGAAATGTTGGATCTAAGCAGAAGTCAACAGCTGGCTGGCTTGCAGCATTTCCAGTATTTGAGCCTCATTGGCAAATATGCATGGCAGGCGGGTTATCAACAGGCATGTTCAATCTTTTAATCAGTTGGATTGAGTGGGAGGACGAAAGGTTTGAGTTTGTAAATGCCCCTTCATACTCTGAAAAGAATTGGGGTGGAGGATTTCCCAGAAAATGGTTTTGGGCTCAGTGTAATGTTTTTGAAGGTGCTCGTGGAGAAGTTTCTCTTACGGCTGGTGGAGGTTTGAGACAACTTCCTGGATTGACGGAAACCTTTGAAAATGCTGCATTGGTTGGAGTCCACTACGATGGAATTTTTTATGAATTCGTGCCATGGAATGGAACTGTTAACTGGGAAATAAGTTCTTGGGGCTATTGGTATATTGCTGCCGAAAATGCAACGCACAAGATTGAATTAGAAGCCAAAACAGACGAGCCTGGTTCACCGTTACGTGCTCCTACAACGGAACGTGGGCTTGACACAGCTTGCAAAGATACTTGTTTTGGTATCTTGAAATTGCAAATGTGGGAACGAAGATTTGATGGCAGCAAGGGCAAGGTTAACCTGCTCTTCATTTTCAATAGTTATATCAGTACAATTCTTGATTTGCAGATTGTATTGGATGTCACAAGTAACATGGCGGCATTGGAAGTTGGAGGAGGGCCTTGGTTTAACACCTGGAAGGGAGAAACTACCACCCCGGAGATCCTCAAGCGTGCTCTTACAACACCTATTGATGTGGAACAAGCTTTTAACTTGCTTCCACTCTTCAAACCTCCTGGCTTGTAG

Protein sequence

MDATACNLPLCGIHHFYSNSMEVQAGKSMFAVKVPQSLKSSSFRRRWGGSSKLKLKSRSSIRVLASSSNSVYESSASAKIEKDNDGGLVCPPGYQPTPANRELRTPHSGYHFDGSTRKFFEGWYFKVSIPQKRQSFCFMYSVENPAFPKKLTTPEIVQHGPRFTGVGAQILGAYDKYICQYSEESQNFWGSRHELSLGNCFASKGGFKPPNKEVHPEEFNKKVVEGFQVTPLWHQGFIRDDGRTNYLETVKTARWEYSTRPVYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLSTGMFNLLISWIEWEDERFEFVNAPSYSEKNWGGGFPRKWFWAQCNVFEGARGEVSLTAGGGLRQLPGLTETFENAALVGVHYDGIFYEFVPWNGTVNWEISSWGYWYIAAENATHKIELEAKTDEPGSPLRAPTTERGLDTACKDTCFGILKLQMWERRFDGSKGKVNLLFIFNSYISTILDLQIVLDVTSNMAALEVGGGPWFNTWKGETTTPEILKRALTTPIDVEQAFNLLPLFKPPGL

Homology

[Close]

BLAST of Cp4.1LG07g02280 vs. Swiss-Prot
Match: TOCC_ARATH (Tocopherol cyclase, chloroplastic OS=Arabidopsis thaliana GN=VTE1 PE=2 SV=1)

HSP 1 Score: 708.0 bits (1826), Expect = 8.0e-203
Identity = 326/472 (69.07%), Postives = 372/472 (78.81%), Query Frame = 1


Query: 70  SVYESSASAKIEKDNDGGLVCPPGYQPTPANRELRTPHSGYHFDGSTRKFFEGWYFKVSI 129
           S+   SAS          +   P Y PT  NRELRTPHSGYHFDG+ RKFFEGWYF+VSI
Sbjct: 42  SISRVSASISTPNSETDKISVKPVYVPTSPNRELRTPHSGYHFDGTPRKFFEGWYFRVSI 101

Query: 130 PQKRQSFCFMYSVENPAFPKKLTTPEIVQHGPRFTGVGAQILGAYDKYICQYSEESQNFW 189
           P+KR+SFCFMYSVENPAF + L+  E+  +GPRFTGVGAQILGA DKY+CQY ++S NFW
Sbjct: 102 PEKRESFCFMYSVENPAFRQSLSPLEVALYGPRFTGVGAQILGANDKYLCQYEQDSHNFW 161

Query: 190 GSRHELSLGNCFASKGGFKPPNKEVHPEEFNKKVVEGFQVTPLWHQGFIRDDGRTNYLET 249
           G RHEL LGN F++  G K PNKEV PEEFN++V EGFQ TP WHQG I DDGRT+Y ET
Sbjct: 162 GDRHELVLGNTFSAVPGAKAPNKEVPPEEFNRRVSEGFQATPFWHQGHICDDGRTDYAET 221

Query: 250 VKTARWEYSTRPVYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLSTGMFNLLISWI 309
           VK+ARWEYSTRPVYGWG+VG+KQKSTAGW AAFPVFEPHWQICMAGGLSTG       WI
Sbjct: 222 VKSARWEYSTRPVYGWGDVGAKQKSTAGWPAAFPVFEPHWQICMAGGLSTG-------WI 281

Query: 310 EWEDERFEFVNAPSYSEKNWGGGFPRKWFWAQCNVFEGARGEVSLTAGGGLRQLPGLTET 369
           EW  ERFEF +APSYSEKNWGGGFPRKWFW QCNVFEGA GEV+LTAGGGLRQLPGLTET
Sbjct: 282 EWGGERFEFRDAPSYSEKNWGGGFPRKWFWVQCNVFEGATGEVALTAGGGLRQLPGLTET 341

Query: 370 FENAALVGVHYDGIFYEFVPWNGTVNWEISSWGYWYIAAENATHKIELEAKTDEPGSPLR 429
           +ENAALV VHYDG  YEFVPWNG V WE+S WGYWYI AEN  H +ELEA+T+E G+PLR
Sbjct: 342 YENAALVCVHYDGKMYEFVPWNGVVRWEMSPWGYWYITAENENHVVELEARTNEAGTPLR 401

Query: 430 APTTERGLDTACKDTCFGILKLQMWERRFDGSKGKVNLLFIFNSYISTILDLQIVLDVTS 489
           APTTE GL TAC+D+C+G LKLQ+WER +DGSKGKV                  +L+  S
Sbjct: 402 APTTEVGLATACRDSCYGELKLQIWERLYDGSKGKV------------------ILETKS 461

Query: 490 NMAALEVGGGPWFNTWKGETT-TPEILKRALTTPIDVEQAFNLLPLFKPPGL 541
           +MAA+E+GGGPWF TWKG+T+ TPE+LK+AL  P+D+E A  L+P FKPPGL
Sbjct: 462 SMAAVEIGGGPWFGTWKGDTSNTPELLKQALQVPLDLESALGLVPFFKPPGL 488

[Close]

BLAST of Cp4.1LG07g02280 vs. Swiss-Prot
Match: TOCC_ORYSJ (Probable tocopherol cyclase, chloroplastic OS=Oryza sativa subsp. japonica GN=VTE1 PE=2 SV=1)

HSP 1 Score: 650.2 bits (1676), Expect = 2.0e-185
Identity = 297/452 (65.71%), Postives = 346/452 (76.55%), Query Frame = 1


Query: 89  VCPPGYQPTPANRELRTPHSGYHFDGSTRKFFEGWYFKVSIPQKRQSFCFMYSVENPAFP 148
           V  P Y PTP +R LRTPHSGYH+DG+ R FFEGWYFKVSIP+ RQSFCFMYSVENP F 
Sbjct: 46  VAAPVYAPTPRDRALRTPHSGYHYDGTARPFFEGWYFKVSIPECRQSFCFMYSVENPLFR 105

Query: 149 KKLTTPEIVQHGPRFTGVGAQILGAYDKYICQYSEESQNFWGSRHELSLGNCFASKGGFK 208
             ++  + V HG RFTGVGAQILGA DKYICQ++E+S NFWGSRHEL LGN F    G  
Sbjct: 106 DGMSDLDRVIHGSRFTGVGAQILGADDKYICQFTEKSNNFWGSRHELMLGNTFIPNNGST 165

Query: 209 PPNKEVHPEEFNKKVVEGFQVTPLWHQGFIRDDGRTNYLETVKTARWEYSTRPVYGWGNV 268
           PP  EV P+EF+ +V+EGFQVTP+WHQGFIRDDGR+ Y+  V+TARWEYSTRPVYGWG+V
Sbjct: 166 PPEGEVPPQEFSSRVLEGFQVTPIWHQGFIRDDGRSKYVPNVQTARWEYSTRPVYGWGDV 225

Query: 269 GSKQKSTAGWLAAFPVFEPHWQICMAGGLSTGMFNLLISWIEWEDERFEFVNAPSYSEKN 328
            SKQKSTAGWLAAFP FEPHWQICMAGGLSTG       WIEW+ ERFEF NAPSYSEKN
Sbjct: 226 TSKQKSTAGWLAAFPFFEPHWQICMAGGLSTG-------WIEWDGERFEFENAPSYSEKN 285

Query: 329 WGGGFPRKWFWAQCNVFEGARGEVSLTAGGGLRQLPGLTETFENAALVGVHYDGIFYEFV 388
           WG GFPRKW+W QCNVF GA GEV+LTA GGLR++ GL ET+E+ +L+G+HY+G FYEFV
Sbjct: 286 WGAGFPRKWYWVQCNVFSGASGEVALTAAGGLRKI-GLGETYESPSLIGIHYEGKFYEFV 345

Query: 389 PWNGTVNWEISSWGYWYIAAENATHKIELEAKTDEPGSPLRAPTTERGLDTACKDTCFGI 448
           PW GTV+W+I+ WG+W ++ EN  H +E+EA T EPG+ LRAPT E GL  ACKDTC+G 
Sbjct: 346 PWTGTVSWDIAPWGHWKLSGENKNHLVEIEATTKEPGTALRAPTMEAGLVPACKDTCYGD 405

Query: 449 LKLQMWERRFDGSKGKVNLLFIFNSYISTILDLQIVLDVTSNMAALEVGGGPWFNTWKGE 508
           L+LQMWE+R DG KGK+                  +LD TSNMAALEVGGGPWFN WKG 
Sbjct: 406 LRLQMWEKRNDGGKGKM------------------ILDATSNMAALEVGGGPWFNGWKGT 465

Query: 509 TTTPEILKRALTTPIDVEQAFNLLPLFKPPGL 541
           T + EI+   + T +DVE  F  +P  KPPGL
Sbjct: 466 TVSNEIVNNVVGTQVDVESLFP-IPFLKPPGL 470

[Close]

BLAST of Cp4.1LG07g02280 vs. Swiss-Prot
Match: TOCC_MAIZE (Probable tocopherol cyclase, chloroplastic OS=Zea mays GN=SDX1 PE=2 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 7.8e-182
Identity = 293/470 (62.34%), Postives = 350/470 (74.47%), Query Frame = 1


Query: 71  VYESSASAKIEKDNDGGLVCPPGYQPTPANRELRTPHSGYHFDGSTRKFFEGWYFKVSIP 130
           V   +AS+ +           P Y PTP +R LRTPHSGYHFDG+ R FFEGWYFKVSIP
Sbjct: 32  VVPRAASSSVSSFTSPSAAAAPIYTPTPQDRSLRTPHSGYHFDGTARPFFEGWYFKVSIP 91

Query: 131 QKRQSFCFMYSVENPAFPKKLTTPEIVQHGPRFTGVGAQILGAYDKYICQYSEESQNFWG 190
           + RQSFCFMYSVENP F   ++  + + + PRFTGVGAQILGA DKYICQ+SE+S NFWG
Sbjct: 92  ECRQSFCFMYSVENPLFRDGMSDLDKLLYRPRFTGVGAQILGADDKYICQFSEKSNNFWG 151

Query: 191 SRHELSLGNCFASKGGFKPPNKEVHPEEFNKKVVEGFQVTPLWHQGFIRDDGRTNYLETV 250
           SRHEL LGN F S     PP  EV P++F+++V+EG QVTP+WHQGFIRDDGR+NY+  V
Sbjct: 152 SRHELMLGNTFISNKESTPPQGEVPPQDFSRRVLEGLQVTPIWHQGFIRDDGRSNYVPNV 211

Query: 251 KTARWEYSTRPVYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLSTGMFNLLISWIE 310
           +TARWEYSTRPVYGWG+V SKQ STAGWLAAFP FEPHWQICMA GLSTG       WIE
Sbjct: 212 QTARWEYSTRPVYGWGDVKSKQLSTAGWLAAFPFFEPHWQICMARGLSTG-------WIE 271

Query: 311 WEDERFEFVNAPSYSEKNWGGGFPRKWFWAQCNVFEGARGEVSLTAGGGLRQLPGLTETF 370
           W+ ERFEF NAPSYSEKNWGGGFPRKW+W QCNVF GA GEVSLTA GGLR++ GL +T+
Sbjct: 272 WDGERFEFENAPSYSEKNWGGGFPRKWYWIQCNVFPGASGEVSLTAAGGLRKI-GLGDTY 331

Query: 371 ENAALVGVHYDGIFYEFVPWNGTVNWEISSWGYWYIAAENATHKIELEAKTDEPGSPLRA 430
           E+ +L+G+HY+G F+EFVPW GTV+W+I  WG W ++ EN TH +E+EA T E G+ LRA
Sbjct: 332 ESPSLIGIHYEGQFFEFVPWTGTVSWDIGLWGLWKMSGENKTHLVEIEATTAESGTALRA 391

Query: 431 PTTERGLDTACKDTCFGILKLQMWERRFDGSKGKVNLLFIFNSYISTILDLQIVLDVTSN 490
           PT E GL  ACKDTC+G L+LQ+WE+++DGSKG                  +++LD TSN
Sbjct: 392 PTIEAGLVPACKDTCYGDLRLQLWEKKYDGSKG------------------EMILDATSN 451

Query: 491 MAALEVGGGPWFNTWKGETTTPEILKRALTTPIDVEQAFNLLPLFKPPGL 541
           MAALEVGGGPWFN WKG T   E++   + TP+DVE     +P  KPPGL
Sbjct: 452 MAALEVGGGPWFNGWKGTTVVNEVVNNIVGTPVDVESLLP-IPFLKPPGL 474

[Close]

BLAST of Cp4.1LG07g02280 vs. TrEMBL
Match: A0A0A0LLK5_CUCSA (Tocopherol cyclase OS=Cucumis sativus GN=Csa_2G374670 PE=4 SV=1)

HSP 1 Score: 988.0 bits (2553), Expect = 4.5e-285
Identity = 472/542 (87.08%), Postives = 492/542 (90.77%), Query Frame = 1


Query: 1   MDATACNLPLCGIHHFYSNSMEVQAGKSMFAVKVPQSLKSSS-FRRRWGGSSKLKLKSRS 60
           M+ATA NLPLCGIHH     +E Q+GK MF +++PQSLKSSS FR R GGSSKL+LKSRS
Sbjct: 1   MEATAWNLPLCGIHHCSFKLVEAQSGKPMFGLELPQSLKSSSSFRLRSGGSSKLELKSRS 60

Query: 61  -SIRVLASSSNSVYESSASAKIEKDNDGGLVCPPGYQPTPANRELRTPHSGYHFDGSTRK 120
            SIRVLASSSNSVYES AS+KIEKD+DGGLVCPPGY+PTPANRELRTPHSGYHFDGSTRK
Sbjct: 61  TSIRVLASSSNSVYESPASSKIEKDDDGGLVCPPGYRPTPANRELRTPHSGYHFDGSTRK 120

Query: 121 FFEGWYFKVSIPQKRQSFCFMYSVENPAFPKKLTTPEIVQHGPRFTGVGAQILGAYDKYI 180
           FFEGWYFKVSIPQKRQSFCFMYSVENPAFPKKLT  +I QHGPRFTGVGAQILGAYDKYI
Sbjct: 121 FFEGWYFKVSIPQKRQSFCFMYSVENPAFPKKLTAVDIAQHGPRFTGVGAQILGAYDKYI 180

Query: 181 CQYSEESQNFWGSRHELSLGNCFASKGGFKPPNKEVHPEEFNKKVVEGFQVTPLWHQGFI 240
           CQYSEESQNFWGSRHELSLGN FA+KGGFKPPNKEV PEEFNKKVVEGFQVTPLWHQGFI
Sbjct: 181 CQYSEESQNFWGSRHELSLGNSFATKGGFKPPNKEVDPEEFNKKVVEGFQVTPLWHQGFI 240

Query: 241 RDDGRTNYLETVKTARWEYSTRPVYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLS 300
           RDDGRTNYLETVKTARWEYS+RPVYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLS
Sbjct: 241 RDDGRTNYLETVKTARWEYSSRPVYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLS 300

Query: 301 TGMFNLLISWIEWEDERFEFVNAPSYSEKNWGGGFPRKWFWAQCNVFEGARGEVSLTAGG 360
           TG       WIEWEDERFEFVNAPSYSEKNWGGGFPRKWFW QCNVFEGARGEV+LTAGG
Sbjct: 301 TG-------WIEWEDERFEFVNAPSYSEKNWGGGFPRKWFWVQCNVFEGARGEVALTAGG 360

Query: 361 GLRQLPGLTETFENAALVGVHYDGIFYEFVPWNGTVNWEISSWGYWYIAAENATHKIELE 420
           GLRQLPGLTETFENAALVGVHYDG FYEFVPWNGTVNWEI++WGYWYIAAEN THK+ELE
Sbjct: 361 GLRQLPGLTETFENAALVGVHYDGTFYEFVPWNGTVNWEINTWGYWYIAAENETHKVELE 420

Query: 421 AKTDEPGSPLRAPTTERGLDTACKDTCFGILKLQMWERRFDGSKGKVNLLFIFNSYISTI 480
            KTDEPGSPLRAPT+E GLDTACKDTCFG LKLQ+WERRFDGSKGK              
Sbjct: 421 GKTDEPGSPLRAPTSECGLDTACKDTCFGTLKLQIWERRFDGSKGK-------------- 480

Query: 481 LDLQIVLDVTSNMAALEVGGGPWFNTWKGETTTPEILKRALTTPIDVEQAFNLLPLFKPP 540
               IVLDVTSNMAALEVGGGPWFNTWKGETTTPEILKRALTTPIDV+QAFNLLPLFKPP
Sbjct: 481 ----IVLDVTSNMAALEVGGGPWFNTWKGETTTPEILKRALTTPIDVDQAFNLLPLFKPP 517

[Close]

BLAST of Cp4.1LG07g02280 vs. TrEMBL
Match: X2D409_9ROSI (Tocopherol cyclase (Fragment) OS=Juglans regia PE=2 SV=1)

HSP 1 Score: 762.7 bits (1968), Expect = 3.0e-217
Identity = 349/471 (74.10%), Postives = 393/471 (83.44%), Query Frame = 1


Query: 72  YESSASAK--IEKDNDGGLVCPPGYQPTPANRELRTPHSGYHFDGSTRKFFEGWYFKVSI 131
           YESS++ +  I+K++ G +   P Y PTP NRELRTPHSGYHFDGS RKFFEGWYFKVSI
Sbjct: 7   YESSSTVQGDIQKESSGSV--SPAYVPTPPNRELRTPHSGYHFDGSARKFFEGWYFKVSI 66

Query: 132 PQKRQSFCFMYSVENPAFPKKLTTPEIVQHGPRFTGVGAQILGAYDKYICQYSEESQNFW 191
           P++RQSFCFMYSVENPAFPKKLT  E+ Q GPRFTGVGAQILGA DKYICQYSEESQ FW
Sbjct: 67  PERRQSFCFMYSVENPAFPKKLTALEVAQRGPRFTGVGAQILGANDKYICQYSEESQYFW 126

Query: 192 GSRHELSLGNCFASKGGFKPPNKEVHPEEFNKKVVEGFQVTPLWHQGFIRDDGRTNYLET 251
           GSRHEL LGN F  +   KPP KEV P+EFNK+V+EGFQV+PLWHQGFIRDDGR+NY++T
Sbjct: 127 GSRHELILGNTFVGEKESKPPYKEVPPQEFNKRVLEGFQVSPLWHQGFIRDDGRSNYVDT 186

Query: 252 VKTARWEYSTRPVYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLSTGMFNLLISWI 311
           VKTARWEYSTRP+YGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLSTG       WI
Sbjct: 187 VKTARWEYSTRPIYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLSTG-------WI 246

Query: 312 EWEDERFEFVNAPSYSEKNWGGGFPRKWFWAQCNVFEGARGEVSLTAGGGLRQLPGLTET 371
           EW+ ERFEF NAPSYSEKNWGG FPRKWFW QCNVFEGA G+V+LTAGGGLRQLPGLTE 
Sbjct: 247 EWDGERFEFQNAPSYSEKNWGGAFPRKWFWVQCNVFEGATGDVALTAGGGLRQLPGLTEN 306

Query: 372 FENAALVGVHYDGIFYEFVPWNGTVNWEISSWGYWYIAAENATHKIELEAKTDEPGSPLR 431
           FENAALVGVHY+GIFYEFVPWNG VNWEI+ WG+WY+AAEN THK+ELEA T + G+ LR
Sbjct: 307 FENAALVGVHYNGIFYEFVPWNGVVNWEIAPWGHWYMAAENRTHKVELEATTKDTGTTLR 366

Query: 432 APTTERGLDTACKDTCFGILKLQMWERRFDGSKGKVNLLFIFNSYISTILDLQIVLDVTS 491
           APT E GL  ACKD+CFG+L+L++WE+R+DGSKGK                  I+LDVTS
Sbjct: 367 APTAESGLAPACKDSCFGVLRLRLWEKRYDGSKGK------------------IILDVTS 426

Query: 492 NMAALEVGGGPWFNTWKGETTTPEILKRALTTPIDVEQAFNLLPLFKPPGL 541
           NMAA+EVGGGPWFN WKG T+TPE+L +A+  P+DVE  FN +P FKPPGL
Sbjct: 427 NMAAVEVGGGPWFNAWKGVTSTPELLSQAIGVPVDVEGIFNYVPFFKPPGL 450

[Close]

BLAST of Cp4.1LG07g02280 vs. TrEMBL
Match: B7X941_HEVBR (Tocopherol cyclase OS=Hevea brasiliensis GN=tc PE=2 SV=1)

HSP 1 Score: 760.0 bits (1961), Expect = 2.0e-216
Identity = 363/528 (68.75%), Postives = 409/528 (77.46%), Query Frame = 1


Query: 13  IHHFYSNSMEVQAGKSMFAVKVPQSLKSSSFRRRWGGSSKLKLKSRSSIRVLASSSNSVY 72
           +HHF SN M   A      +K P  L  SS    W         SRS + V    SNSV 
Sbjct: 12  LHHFSSN-MGFPALNPCSTLK-PFRLNQSSVGIHWRSLQVGFRSSRSRLLV----SNSVT 71

Query: 73  ESSASAKIEKDNDGGLVCPPGYQPTPANRELRTPHSGYHFDGSTRKFFEGWYFKVSIPQK 132
           +   S       +G     P Y  TP NRELRTPHSGYHFDG+TR+FFEGWYFKVSIP++
Sbjct: 72  DRQTSTVERGGTEGVASASPVYVATPPNRELRTPHSGYHFDGTTRQFFEGWYFKVSIPER 131

Query: 133 RQSFCFMYSVENPAFPKKLTTPEIVQHGPRFTGVGAQILGAYDKYICQYSEESQNFWGSR 192
           ++SFCFMYSVENPAF KKL+  E+ QHGPR TGVGAQILGA DKYICQYSEESQNFWGSR
Sbjct: 132 KESFCFMYSVENPAFRKKLSPLEVAQHGPRSTGVGAQILGASDKYICQYSEESQNFWGSR 191

Query: 193 HELSLGNCFASKGGFKPPNKEVHPEEFNKKVVEGFQVTPLWHQGFIRDDGRTNYLETVKT 252
           HEL LGN F ++ G +PP+KEV P+EFN+ V EGFQVTPLW+QGFIRDDGR++Y++TVKT
Sbjct: 192 HELMLGNTFVAEKGMQPPSKEVPPQEFNRMVSEGFQVTPLWNQGFIRDDGRSDYVKTVKT 251

Query: 253 ARWEYSTRPVYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLSTGMFNLLISWIEWE 312
           ARWEYSTRPVYGWGNVGSKQ+STAGWLAAFPVFEPHWQICMA GLSTG       WIEW+
Sbjct: 252 ARWEYSTRPVYGWGNVGSKQQSTAGWLAAFPVFEPHWQICMAAGLSTG-------WIEWD 311

Query: 313 DERFEFVNAPSYSEKNWGGGFPRKWFWAQCNVFEGARGEVSLTAGGGLRQLPGLTETFEN 372
            ERFEF +APSYSEKNWGGGFPRKWFWAQCN FEGA GEV+LT GGGLRQLPGLTETFEN
Sbjct: 312 GERFEFKDAPSYSEKNWGGGFPRKWFWAQCNTFEGASGEVALTVGGGLRQLPGLTETFEN 371

Query: 373 AALVGVHYDGIFYEFVPWNGTVNWEISSWGYWYIAAENATHKIELEAKTDEPGSPLRAPT 432
           AAL+GVHYDGIFYEFVPW G V WEIS WGYW++ AEN TH +ELEA T +PG+ LRAPT
Sbjct: 372 AALIGVHYDGIFYEFVPWKGVVTWEISPWGYWFVTAENETHLVELEATTKDPGTTLRAPT 431

Query: 433 TERGLDTACKDTCFGILKLQMWERRFDGSKGKVNLLFIFNSYISTILDLQIVLDVTSNMA 492
           TE GL  ACKDTC+G+LKL++WERR+DGSKGK                  I+LDVTS+MA
Sbjct: 432 TEAGLAPACKDTCYGVLKLKLWERRYDGSKGK------------------IILDVTSDMA 491

Query: 493 ALEVGGGPWFNTWKGETTTPEILKRALTTPIDVEQAFNLLPLFKPPGL 541
           A+EVGGGPWFNTWKG+TTTPE+L RAL  P+DV+  FN LPLFKPPGL
Sbjct: 492 AVEVGGGPWFNTWKGKTTTPELLSRALRVPLDVDGIFNFLPLFKPPGL 508

[Close]

BLAST of Cp4.1LG07g02280 vs. TrEMBL
Match: A0A0D2RUB9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G050600 PE=4 SV=1)

HSP 1 Score: 756.1 bits (1951), Expect = 2.9e-215
Identity = 357/528 (67.61%), Postives = 415/528 (78.60%), Query Frame = 1


Query: 13  IHHFYSNSMEVQAGKSMFAVKVPQSLKSSSFRRRWGGSSKLKLKSRSSIRVLASSSNSVY 72
           + HF S  + +++  S  AVK+ QS   +    R     +L  +S S I   +S + +  
Sbjct: 11  LRHFSSCYIGLRSLNSKTAVKLSQSSNFNGLFPRRLRPLRLGFRSNSPIIACSSIAETDT 70

Query: 73  ESSASAKIEKDNDGGLVCPPGYQPTPANRELRTPHSGYHFDGSTRKFFEGWYFKVSIPQK 132
           E+S++A     +D  +   P Y PTPANR+ RTPHSGYHFDG+TR+FFEGWYFKVSIP++
Sbjct: 71  ETSSTA-----SDRPVPVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPER 130

Query: 133 RQSFCFMYSVENPAFPKKLTTPEIVQHGPRFTGVGAQILGAYDKYICQYSEESQNFWGSR 192
           +QSFCFMYSVENP F +KLT  E +QHGPRFTGVGAQILGAYDKYICQYS+ESQNFWGSR
Sbjct: 131 KQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDKYICQYSDESQNFWGSR 190

Query: 193 HELSLGNCFASKGGFKPPNKEVHPEEFNKKVVEGFQVTPLWHQGFIRDDGRTNYLETVKT 252
           HEL LGN F +    +PP+KEV PEEFN+KV+EGFQV+PLWHQGFIRDDGRT+Y  TVKT
Sbjct: 191 HELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGRTSYARTVKT 250

Query: 253 ARWEYSTRPVYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLSTGMFNLLISWIEWE 312
           ARWEYSTRP YGWG+VGSKQKSTAGWLAAFP+FEPHWQICMAGGLSTG       WIEW+
Sbjct: 251 ARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMAGGLSTG-------WIEWD 310

Query: 313 DERFEFVNAPSYSEKNWGGGFPRKWFWAQCNVFEGARGEVSLTAGGGLRQLPGLTETFEN 372
            ERFEF +APSYSEKNWGG FPRKWFWAQCNVFEGA GEV+LTAGGGLRQLPGLTETFEN
Sbjct: 311 GERFEFQDAPSYSEKNWGGAFPRKWFWAQCNVFEGASGEVALTAGGGLRQLPGLTETFEN 370

Query: 373 AALVGVHYDGIFYEFVPWNGTVNWEISSWGYWYIAAENATHKIELEAKTDEPGSPLRAPT 432
           AAL+GVHYDGIFYEFVPWNG ++WEI+ WGYW IAAEN TH +ELEA T++PG+ LRAPT
Sbjct: 371 AALIGVHYDGIFYEFVPWNGVLSWEIAPWGYWCIAAENETHMVELEATTNDPGTTLRAPT 430

Query: 433 TERGLDTACKDTCFGILKLQMWERRFDGSKGKVNLLFIFNSYISTILDLQIVLDVTSNMA 492
            E GL  ACKDTCFG L+LQ+WE+++ G+KGK                  ++LDV S+MA
Sbjct: 431 IEAGLAPACKDTCFGNLRLQIWEKKYGGTKGK------------------LILDVKSDMA 490

Query: 493 ALEVGGGPWFNTWKGETTTPEILKRALTTPIDVEQAFNLLPLFKPPGL 541
           ALEVGGGPWFNTWKG+TTTPE+LK AL  P+DVE  F L P FKPPGL
Sbjct: 491 ALEVGGGPWFNTWKGKTTTPEVLKTALQVPVDVEGIFGLAPFFKPPGL 508

[Close]

BLAST of Cp4.1LG07g02280 vs. TrEMBL
Match: A0A0D2TDW0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G050600 PE=4 SV=1)

HSP 1 Score: 755.0 bits (1948), Expect = 6.4e-215
Identity = 356/528 (67.42%), Postives = 415/528 (78.60%), Query Frame = 1


Query: 13  IHHFYSNSMEVQAGKSMFAVKVPQSLKSSSFRRRWGGSSKLKLKSRSSIRVLASSSNSVY 72
           + HF S  + +++  S  AVK+ QS   +    R     +L  +S S I   +S + +  
Sbjct: 11  LRHFSSCYIGLRSLNSKTAVKLSQSSNFNGLFPRRLRPLRLGFRSNSPIIACSSIAETDT 70

Query: 73  ESSASAKIEKDNDGGLVCPPGYQPTPANRELRTPHSGYHFDGSTRKFFEGWYFKVSIPQK 132
           E+S++A     +D  +   P Y PTPANR+ RTPHSGYHFDG+TR+FFEGWYFKVSIP++
Sbjct: 71  ETSSTA-----SDRPVPVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPER 130

Query: 133 RQSFCFMYSVENPAFPKKLTTPEIVQHGPRFTGVGAQILGAYDKYICQYSEESQNFWGSR 192
           +QSFCFMYSVENP F +KLT  E +QHGPRFTGVGAQILGAYDKYICQYS+ESQNFWGS+
Sbjct: 131 KQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDKYICQYSDESQNFWGSK 190

Query: 193 HELSLGNCFASKGGFKPPNKEVHPEEFNKKVVEGFQVTPLWHQGFIRDDGRTNYLETVKT 252
           HEL LGN F +    +PP+KEV PEEFN+KV+EGFQV+PLWHQGFIRDDGRT+Y  TVKT
Sbjct: 191 HELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGRTSYARTVKT 250

Query: 253 ARWEYSTRPVYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLSTGMFNLLISWIEWE 312
           ARWEYSTRP YGWG+VGSKQKSTAGWLAAFP+FEPHWQICMAGGLSTG       WIEW+
Sbjct: 251 ARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMAGGLSTG-------WIEWD 310

Query: 313 DERFEFVNAPSYSEKNWGGGFPRKWFWAQCNVFEGARGEVSLTAGGGLRQLPGLTETFEN 372
            ERFEF +APSYSEKNWGG FPRKWFWAQCNVFEGA GEV+LTAGGGLRQLPGLTETFEN
Sbjct: 311 GERFEFQDAPSYSEKNWGGAFPRKWFWAQCNVFEGASGEVALTAGGGLRQLPGLTETFEN 370

Query: 373 AALVGVHYDGIFYEFVPWNGTVNWEISSWGYWYIAAENATHKIELEAKTDEPGSPLRAPT 432
           AAL+GVHYDGIFYEFVPWNG ++WEI+ WGYW IAAEN TH +ELEA T++PG+ LRAPT
Sbjct: 371 AALIGVHYDGIFYEFVPWNGVLSWEIAPWGYWCIAAENETHMVELEATTNDPGTTLRAPT 430

Query: 433 TERGLDTACKDTCFGILKLQMWERRFDGSKGKVNLLFIFNSYISTILDLQIVLDVTSNMA 492
            E GL  ACKDTCFG L+LQ+WE+++ G+KGK                  ++LDV S+MA
Sbjct: 431 IEAGLAPACKDTCFGNLRLQIWEKKYGGTKGK------------------LILDVKSDMA 490

Query: 493 ALEVGGGPWFNTWKGETTTPEILKRALTTPIDVEQAFNLLPLFKPPGL 541
           ALEVGGGPWFNTWKG+TTTPE+LK AL  P+DVE  F L P FKPPGL
Sbjct: 491 ALEVGGGPWFNTWKGKTTTPEVLKTALQVPVDVEGIFGLAPFFKPPGL 508

[Close]

BLAST of Cp4.1LG07g02280 vs. TAIR10
Match: AT4G32770.1 (AT4G32770.1 tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1))

HSP 1 Score: 708.0 bits (1826), Expect = 4.5e-204
Identity = 326/472 (69.07%), Postives = 372/472 (78.81%), Query Frame = 1


Query: 70  SVYESSASAKIEKDNDGGLVCPPGYQPTPANRELRTPHSGYHFDGSTRKFFEGWYFKVSI 129
           S+   SAS          +   P Y PT  NRELRTPHSGYHFDG+ RKFFEGWYF+VSI
Sbjct: 42  SISRVSASISTPNSETDKISVKPVYVPTSPNRELRTPHSGYHFDGTPRKFFEGWYFRVSI 101

Query: 130 PQKRQSFCFMYSVENPAFPKKLTTPEIVQHGPRFTGVGAQILGAYDKYICQYSEESQNFW 189
           P+KR+SFCFMYSVENPAF + L+  E+  +GPRFTGVGAQILGA DKY+CQY ++S NFW
Sbjct: 102 PEKRESFCFMYSVENPAFRQSLSPLEVALYGPRFTGVGAQILGANDKYLCQYEQDSHNFW 161

Query: 190 GSRHELSLGNCFASKGGFKPPNKEVHPEEFNKKVVEGFQVTPLWHQGFIRDDGRTNYLET 249
           G RHEL LGN F++  G K PNKEV PEEFN++V EGFQ TP WHQG I DDGRT+Y ET
Sbjct: 162 GDRHELVLGNTFSAVPGAKAPNKEVPPEEFNRRVSEGFQATPFWHQGHICDDGRTDYAET 221

Query: 250 VKTARWEYSTRPVYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLSTGMFNLLISWI 309
           VK+ARWEYSTRPVYGWG+VG+KQKSTAGW AAFPVFEPHWQICMAGGLSTG       WI
Sbjct: 222 VKSARWEYSTRPVYGWGDVGAKQKSTAGWPAAFPVFEPHWQICMAGGLSTG-------WI 281

Query: 310 EWEDERFEFVNAPSYSEKNWGGGFPRKWFWAQCNVFEGARGEVSLTAGGGLRQLPGLTET 369
           EW  ERFEF +APSYSEKNWGGGFPRKWFW QCNVFEGA GEV+LTAGGGLRQLPGLTET
Sbjct: 282 EWGGERFEFRDAPSYSEKNWGGGFPRKWFWVQCNVFEGATGEVALTAGGGLRQLPGLTET 341

Query: 370 FENAALVGVHYDGIFYEFVPWNGTVNWEISSWGYWYIAAENATHKIELEAKTDEPGSPLR 429
           +ENAALV VHYDG  YEFVPWNG V WE+S WGYWYI AEN  H +ELEA+T+E G+PLR
Sbjct: 342 YENAALVCVHYDGKMYEFVPWNGVVRWEMSPWGYWYITAENENHVVELEARTNEAGTPLR 401

Query: 430 APTTERGLDTACKDTCFGILKLQMWERRFDGSKGKVNLLFIFNSYISTILDLQIVLDVTS 489
           APTTE GL TAC+D+C+G LKLQ+WER +DGSKGKV                  +L+  S
Sbjct: 402 APTTEVGLATACRDSCYGELKLQIWERLYDGSKGKV------------------ILETKS 461

Query: 490 NMAALEVGGGPWFNTWKGETT-TPEILKRALTTPIDVEQAFNLLPLFKPPGL 541
           +MAA+E+GGGPWF TWKG+T+ TPE+LK+AL  P+D+E A  L+P FKPPGL
Sbjct: 462 SMAAVEIGGGPWFGTWKGDTSNTPELLKQALQVPLDLESALGLVPFFKPPGL 488

[Close]

BLAST of Cp4.1LG07g02280 vs. NCBI nr
Match: gi|659088514|ref|XP_008445022.1| (PREDICTED: tocopherol cyclase, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 998.4 bits (2580), Expect = 4.7e-288
Identity = 476/542 (87.82%), Postives = 494/542 (91.14%), Query Frame = 1


Query: 1   MDATACNLPLCGIHHFYSNSMEVQAGKSMFAVKVPQSLKSSS-FRRRWGGSSKLKLKSRS 60
           M+ATACNLPLCGIHH  S  +E QAG+ MF V++P SLKSSS FR RWGGSSKL+LKSRS
Sbjct: 1   MEATACNLPLCGIHHCSSRLVEAQAGRPMFGVELPLSLKSSSSFRLRWGGSSKLELKSRS 60

Query: 61  -SIRVLASSSNSVYESSASAKIEKDNDGGLVCPPGYQPTPANRELRTPHSGYHFDGSTRK 120
            SIRVLASSSNSVYESSAS KIEKD+DGGLVCPPGY+PTPANRELRTPHSGYHFDGSTRK
Sbjct: 61  TSIRVLASSSNSVYESSASLKIEKDDDGGLVCPPGYRPTPANRELRTPHSGYHFDGSTRK 120

Query: 121 FFEGWYFKVSIPQKRQSFCFMYSVENPAFPKKLTTPEIVQHGPRFTGVGAQILGAYDKYI 180
           FFEGWYFKVSIPQKRQSFCFMYSVENPAFPKKLT  +I QHGPRFTGVGAQILGAYDKYI
Sbjct: 121 FFEGWYFKVSIPQKRQSFCFMYSVENPAFPKKLTAVDIAQHGPRFTGVGAQILGAYDKYI 180

Query: 181 CQYSEESQNFWGSRHELSLGNCFASKGGFKPPNKEVHPEEFNKKVVEGFQVTPLWHQGFI 240
           CQYSEESQNFWGSRHELSLGN FA+KGGFKPPNKEV PEEFNKKVVEGFQVTPLWHQGFI
Sbjct: 181 CQYSEESQNFWGSRHELSLGNSFATKGGFKPPNKEVDPEEFNKKVVEGFQVTPLWHQGFI 240

Query: 241 RDDGRTNYLETVKTARWEYSTRPVYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLS 300
           RDDGRTNYLETVKTARWEYS+RPVYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLS
Sbjct: 241 RDDGRTNYLETVKTARWEYSSRPVYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLS 300

Query: 301 TGMFNLLISWIEWEDERFEFVNAPSYSEKNWGGGFPRKWFWAQCNVFEGARGEVSLTAGG 360
           TG       WIEWEDERFEFVNAPSYSEKNWGGGFPRKWFW QCNVFEGARGEV+LTAGG
Sbjct: 301 TG-------WIEWEDERFEFVNAPSYSEKNWGGGFPRKWFWVQCNVFEGARGEVALTAGG 360

Query: 361 GLRQLPGLTETFENAALVGVHYDGIFYEFVPWNGTVNWEISSWGYWYIAAENATHKIELE 420
           GLRQLPGLTETFENAALVGVHYDGIFYEFVPWNGTVNWEIS+WGYWYIAAEN THK+ELE
Sbjct: 361 GLRQLPGLTETFENAALVGVHYDGIFYEFVPWNGTVNWEISTWGYWYIAAENETHKVELE 420

Query: 421 AKTDEPGSPLRAPTTERGLDTACKDTCFGILKLQMWERRFDGSKGKVNLLFIFNSYISTI 480
            KTD PGSPLRAPT+E GLDTACKDTCFG LKLQ+WERRFDGSKGK              
Sbjct: 421 GKTDVPGSPLRAPTSECGLDTACKDTCFGTLKLQIWERRFDGSKGK-------------- 480

Query: 481 LDLQIVLDVTSNMAALEVGGGPWFNTWKGETTTPEILKRALTTPIDVEQAFNLLPLFKPP 540
               IVLDVTSNMAALEVGGGPWFNTWKGETTTPEILKRALTTPIDV++AFNLLPLFKPP
Sbjct: 481 ----IVLDVTSNMAALEVGGGPWFNTWKGETTTPEILKRALTTPIDVDRAFNLLPLFKPP 517

[Close]

BLAST of Cp4.1LG07g02280 vs. NCBI nr
Match: gi|778672072|ref|XP_011649737.1| (PREDICTED: tocopherol cyclase, chloroplastic [Cucumis sativus])

HSP 1 Score: 988.0 bits (2553), Expect = 6.4e-285
Identity = 472/542 (87.08%), Postives = 492/542 (90.77%), Query Frame = 1


Query: 1   MDATACNLPLCGIHHFYSNSMEVQAGKSMFAVKVPQSLKSSS-FRRRWGGSSKLKLKSRS 60
           M+ATA NLPLCGIHH     +E Q+GK MF +++PQSLKSSS FR R GGSSKL+LKSRS
Sbjct: 1   MEATAWNLPLCGIHHCSFKLVEAQSGKPMFGLELPQSLKSSSSFRLRSGGSSKLELKSRS 60

Query: 61  -SIRVLASSSNSVYESSASAKIEKDNDGGLVCPPGYQPTPANRELRTPHSGYHFDGSTRK 120
            SIRVLASSSNSVYES AS+KIEKD+DGGLVCPPGY+PTPANRELRTPHSGYHFDGSTRK
Sbjct: 61  TSIRVLASSSNSVYESPASSKIEKDDDGGLVCPPGYRPTPANRELRTPHSGYHFDGSTRK 120

Query: 121 FFEGWYFKVSIPQKRQSFCFMYSVENPAFPKKLTTPEIVQHGPRFTGVGAQILGAYDKYI 180
           FFEGWYFKVSIPQKRQSFCFMYSVENPAFPKKLT  +I QHGPRFTGVGAQILGAYDKYI
Sbjct: 121 FFEGWYFKVSIPQKRQSFCFMYSVENPAFPKKLTAVDIAQHGPRFTGVGAQILGAYDKYI 180

Query: 181 CQYSEESQNFWGSRHELSLGNCFASKGGFKPPNKEVHPEEFNKKVVEGFQVTPLWHQGFI 240
           CQYSEESQNFWGSRHELSLGN FA+KGGFKPPNKEV PEEFNKKVVEGFQVTPLWHQGFI
Sbjct: 181 CQYSEESQNFWGSRHELSLGNSFATKGGFKPPNKEVDPEEFNKKVVEGFQVTPLWHQGFI 240

Query: 241 RDDGRTNYLETVKTARWEYSTRPVYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLS 300
           RDDGRTNYLETVKTARWEYS+RPVYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLS
Sbjct: 241 RDDGRTNYLETVKTARWEYSSRPVYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLS 300

Query: 301 TGMFNLLISWIEWEDERFEFVNAPSYSEKNWGGGFPRKWFWAQCNVFEGARGEVSLTAGG 360
           TG       WIEWEDERFEFVNAPSYSEKNWGGGFPRKWFW QCNVFEGARGEV+LTAGG
Sbjct: 301 TG-------WIEWEDERFEFVNAPSYSEKNWGGGFPRKWFWVQCNVFEGARGEVALTAGG 360

Query: 361 GLRQLPGLTETFENAALVGVHYDGIFYEFVPWNGTVNWEISSWGYWYIAAENATHKIELE 420
           GLRQLPGLTETFENAALVGVHYDG FYEFVPWNGTVNWEI++WGYWYIAAEN THK+ELE
Sbjct: 361 GLRQLPGLTETFENAALVGVHYDGTFYEFVPWNGTVNWEINTWGYWYIAAENETHKVELE 420

Query: 421 AKTDEPGSPLRAPTTERGLDTACKDTCFGILKLQMWERRFDGSKGKVNLLFIFNSYISTI 480
            KTDEPGSPLRAPT+E GLDTACKDTCFG LKLQ+WERRFDGSKGK              
Sbjct: 421 GKTDEPGSPLRAPTSECGLDTACKDTCFGTLKLQIWERRFDGSKGK-------------- 480

Query: 481 LDLQIVLDVTSNMAALEVGGGPWFNTWKGETTTPEILKRALTTPIDVEQAFNLLPLFKPP 540
               IVLDVTSNMAALEVGGGPWFNTWKGETTTPEILKRALTTPIDV+QAFNLLPLFKPP
Sbjct: 481 ----IVLDVTSNMAALEVGGGPWFNTWKGETTTPEILKRALTTPIDVDQAFNLLPLFKPP 517

[Close]

BLAST of Cp4.1LG07g02280 vs. NCBI nr
Match: gi|659088516|ref|XP_008445023.1| (PREDICTED: tocopherol cyclase, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 951.0 bits (2457), Expect = 8.7e-274
Identity = 456/528 (86.36%), Postives = 473/528 (89.58%), Query Frame = 1


Query: 1   MDATACNLPLCGIHHFYSNSMEVQAGKSMFAVKVPQSLKSSS-FRRRWGGSSKLKLKSRS 60
           M+ATACNLPLCGIHH  S  +E QAG+ MF V++P SLKSSS FR RWGGSSKL+LKSRS
Sbjct: 1   MEATACNLPLCGIHHCSSRLVEAQAGRPMFGVELPLSLKSSSSFRLRWGGSSKLELKSRS 60

Query: 61  -SIRVLASSSNSVYESSASAKIEKDNDGGLVCPPGYQPTPANRELRTPHSGYHFDGSTRK 120
            SIRVLASSSNSVYESSAS KIEKD+DGGLVCPPGY+PTPANRELRTPHSGYHFDGSTRK
Sbjct: 61  TSIRVLASSSNSVYESSASLKIEKDDDGGLVCPPGYRPTPANRELRTPHSGYHFDGSTRK 120

Query: 121 FFEGWYFKVSIPQKRQSFCFMYSVENPAFPKKLTTPEIVQHGPRFTGVGAQILGAYDKYI 180
           FFEGWYFKVSIPQKRQSFCFMYSVENPAFPKKLT  +I QHGPRFTGVGAQILGAYDKYI
Sbjct: 121 FFEGWYFKVSIPQKRQSFCFMYSVENPAFPKKLTAVDIAQHGPRFTGVGAQILGAYDKYI 180

Query: 181 CQYSEESQNFWGSRHELSLGNCFASKGGFKPPNKEVHPEEFNKKVVEGFQVTPLWHQGFI 240
           CQYSEESQNFWGSRHELSLGN FA+KGGFKPPNKEV PEEFNKKVVEGFQVTPLWHQGFI
Sbjct: 181 CQYSEESQNFWGSRHELSLGNSFATKGGFKPPNKEVDPEEFNKKVVEGFQVTPLWHQGFI 240

Query: 241 RDDGRTNYLETVKTARWEYSTRPVYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLS 300
           RDDGRTNYLETVKTARWEYS+RPVYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLS
Sbjct: 241 RDDGRTNYLETVKTARWEYSSRPVYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLS 300

Query: 301 TGMFNLLISWIEWEDERFEFVNAPSYSEKNWGGGFPRKWFWAQCNVFEGARGEVSLTAGG 360
           TG       WIEWEDERFEFVNAPSYSEKNWGGGFPRKWFW QCNVFEGARGEV+LTAGG
Sbjct: 301 TG-------WIEWEDERFEFVNAPSYSEKNWGGGFPRKWFWVQCNVFEGARGEVALTAGG 360

Query: 361 GLRQLPGLTETFENAALVGVHYDGIFYEFVPWNGTVNWEISSWGYWYIAAENATHKIELE 420
           GLRQLPGLTETFENAALVGVHYDGIFYEFVPWNGTVNWEIS+WGYWYIAAEN THK+ELE
Sbjct: 361 GLRQLPGLTETFENAALVGVHYDGIFYEFVPWNGTVNWEISTWGYWYIAAENETHKVELE 420

Query: 421 AKTDEPGSPLRAPTTERGLDTACKDTCFGILKLQMWERRFDGSKGKVNLLFIFNSYISTI 480
            KTD PGSPLRAPT+E GLDTACKDTCFG LKLQ+WERRFDGSKGK              
Sbjct: 421 GKTDVPGSPLRAPTSECGLDTACKDTCFGTLKLQIWERRFDGSKGK-------------- 480

Query: 481 LDLQIVLDVTSNMAALEVGGGPWFNTWKGETTTPEILKRALTTPIDVE 527
               IVLDVTSNMAALEVGGG WFNTWKGETTTPEIL   L   IDV+
Sbjct: 481 ----IVLDVTSNMAALEVGGGAWFNTWKGETTTPEILNNTL---IDVD 500

[Close]

BLAST of Cp4.1LG07g02280 vs. NCBI nr
Match: gi|576317990|gb|AHH29648.1| (tocopherol cyclase, partial [Juglans regia])

HSP 1 Score: 762.7 bits (1968), Expect = 4.4e-217
Identity = 349/471 (74.10%), Postives = 393/471 (83.44%), Query Frame = 1


Query: 72  YESSASAK--IEKDNDGGLVCPPGYQPTPANRELRTPHSGYHFDGSTRKFFEGWYFKVSI 131
           YESS++ +  I+K++ G +   P Y PTP NRELRTPHSGYHFDGS RKFFEGWYFKVSI
Sbjct: 7   YESSSTVQGDIQKESSGSV--SPAYVPTPPNRELRTPHSGYHFDGSARKFFEGWYFKVSI 66

Query: 132 PQKRQSFCFMYSVENPAFPKKLTTPEIVQHGPRFTGVGAQILGAYDKYICQYSEESQNFW 191
           P++RQSFCFMYSVENPAFPKKLT  E+ Q GPRFTGVGAQILGA DKYICQYSEESQ FW
Sbjct: 67  PERRQSFCFMYSVENPAFPKKLTALEVAQRGPRFTGVGAQILGANDKYICQYSEESQYFW 126

Query: 192 GSRHELSLGNCFASKGGFKPPNKEVHPEEFNKKVVEGFQVTPLWHQGFIRDDGRTNYLET 251
           GSRHEL LGN F  +   KPP KEV P+EFNK+V+EGFQV+PLWHQGFIRDDGR+NY++T
Sbjct: 127 GSRHELILGNTFVGEKESKPPYKEVPPQEFNKRVLEGFQVSPLWHQGFIRDDGRSNYVDT 186

Query: 252 VKTARWEYSTRPVYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLSTGMFNLLISWI 311
           VKTARWEYSTRP+YGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLSTG       WI
Sbjct: 187 VKTARWEYSTRPIYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLSTG-------WI 246

Query: 312 EWEDERFEFVNAPSYSEKNWGGGFPRKWFWAQCNVFEGARGEVSLTAGGGLRQLPGLTET 371
           EW+ ERFEF NAPSYSEKNWGG FPRKWFW QCNVFEGA G+V+LTAGGGLRQLPGLTE 
Sbjct: 247 EWDGERFEFQNAPSYSEKNWGGAFPRKWFWVQCNVFEGATGDVALTAGGGLRQLPGLTEN 306

Query: 372 FENAALVGVHYDGIFYEFVPWNGTVNWEISSWGYWYIAAENATHKIELEAKTDEPGSPLR 431
           FENAALVGVHY+GIFYEFVPWNG VNWEI+ WG+WY+AAEN THK+ELEA T + G+ LR
Sbjct: 307 FENAALVGVHYNGIFYEFVPWNGVVNWEIAPWGHWYMAAENRTHKVELEATTKDTGTTLR 366

Query: 432 APTTERGLDTACKDTCFGILKLQMWERRFDGSKGKVNLLFIFNSYISTILDLQIVLDVTS 491
           APT E GL  ACKD+CFG+L+L++WE+R+DGSKGK                  I+LDVTS
Sbjct: 367 APTAESGLAPACKDSCFGVLRLRLWEKRYDGSKGK------------------IILDVTS 426

Query: 492 NMAALEVGGGPWFNTWKGETTTPEILKRALTTPIDVEQAFNLLPLFKPPGL 541
           NMAA+EVGGGPWFN WKG T+TPE+L +A+  P+DVE  FN +P FKPPGL
Sbjct: 427 NMAAVEVGGGPWFNAWKGVTSTPELLSQAIGVPVDVEGIFNYVPFFKPPGL 450

[Close]

BLAST of Cp4.1LG07g02280 vs. NCBI nr
Match: gi|219842174|dbj|BAH10644.1| (tocopherol cyclase [Hevea brasiliensis])

HSP 1 Score: 760.0 bits (1961), Expect = 2.8e-216
Identity = 363/528 (68.75%), Postives = 409/528 (77.46%), Query Frame = 1


Query: 13  IHHFYSNSMEVQAGKSMFAVKVPQSLKSSSFRRRWGGSSKLKLKSRSSIRVLASSSNSVY 72
           +HHF SN M   A      +K P  L  SS    W         SRS + V    SNSV 
Sbjct: 12  LHHFSSN-MGFPALNPCSTLK-PFRLNQSSVGIHWRSLQVGFRSSRSRLLV----SNSVT 71

Query: 73  ESSASAKIEKDNDGGLVCPPGYQPTPANRELRTPHSGYHFDGSTRKFFEGWYFKVSIPQK 132
           +   S       +G     P Y  TP NRELRTPHSGYHFDG+TR+FFEGWYFKVSIP++
Sbjct: 72  DRQTSTVERGGTEGVASASPVYVATPPNRELRTPHSGYHFDGTTRQFFEGWYFKVSIPER 131

Query: 133 RQSFCFMYSVENPAFPKKLTTPEIVQHGPRFTGVGAQILGAYDKYICQYSEESQNFWGSR 192
           ++SFCFMYSVENPAF KKL+  E+ QHGPR TGVGAQILGA DKYICQYSEESQNFWGSR
Sbjct: 132 KESFCFMYSVENPAFRKKLSPLEVAQHGPRSTGVGAQILGASDKYICQYSEESQNFWGSR 191

Query: 193 HELSLGNCFASKGGFKPPNKEVHPEEFNKKVVEGFQVTPLWHQGFIRDDGRTNYLETVKT 252
           HEL LGN F ++ G +PP+KEV P+EFN+ V EGFQVTPLW+QGFIRDDGR++Y++TVKT
Sbjct: 192 HELMLGNTFVAEKGMQPPSKEVPPQEFNRMVSEGFQVTPLWNQGFIRDDGRSDYVKTVKT 251

Query: 253 ARWEYSTRPVYGWGNVGSKQKSTAGWLAAFPVFEPHWQICMAGGLSTGMFNLLISWIEWE 312
           ARWEYSTRPVYGWGNVGSKQ+STAGWLAAFPVFEPHWQICMA GLSTG       WIEW+
Sbjct: 252 ARWEYSTRPVYGWGNVGSKQQSTAGWLAAFPVFEPHWQICMAAGLSTG-------WIEWD 311

Query: 313 DERFEFVNAPSYSEKNWGGGFPRKWFWAQCNVFEGARGEVSLTAGGGLRQLPGLTETFEN 372
            ERFEF +APSYSEKNWGGGFPRKWFWAQCN FEGA GEV+LT GGGLRQLPGLTETFEN
Sbjct: 312 GERFEFKDAPSYSEKNWGGGFPRKWFWAQCNTFEGASGEVALTVGGGLRQLPGLTETFEN 371

Query: 373 AALVGVHYDGIFYEFVPWNGTVNWEISSWGYWYIAAENATHKIELEAKTDEPGSPLRAPT 432
           AAL+GVHYDGIFYEFVPW G V WEIS WGYW++ AEN TH +ELEA T +PG+ LRAPT
Sbjct: 372 AALIGVHYDGIFYEFVPWKGVVTWEISPWGYWFVTAENETHLVELEATTKDPGTTLRAPT 431

Query: 433 TERGLDTACKDTCFGILKLQMWERRFDGSKGKVNLLFIFNSYISTILDLQIVLDVTSNMA 492
           TE GL  ACKDTC+G+LKL++WERR+DGSKGK                  I+LDVTS+MA
Sbjct: 432 TEAGLAPACKDTCYGVLKLKLWERRYDGSKGK------------------IILDVTSDMA 491

Query: 493 ALEVGGGPWFNTWKGETTTPEILKRALTTPIDVEQAFNLLPLFKPPGL 541
           A+EVGGGPWFNTWKG+TTTPE+L RAL  P+DV+  FN LPLFKPPGL
Sbjct: 492 AVEVGGGPWFNTWKGKTTTPELLSRALRVPLDVDGIFNFLPLFKPPGL 508

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g02280 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TOCC_ARATH	8.0e-203	69.07	Tocopherol cyclase, chloroplastic OS=Arabidopsis thaliana GN=VTE1 PE=2 SV=1	[more]
TOCC_ORYSJ	2.0e-185	65.71	Probable tocopherol cyclase, chloroplastic OS=Oryza sativa subsp. japonica GN=VT...	[more]
TOCC_MAIZE	7.8e-182	62.34	Probable tocopherol cyclase, chloroplastic OS=Zea mays GN=SDX1 PE=2 SV=1	[more]

BLAST of Cp4.1LG07g02280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLK5_CUCSA	4.5e-285	87.08	Tocopherol cyclase OS=Cucumis sativus GN=Csa_2G374670 PE=4 SV=1	[more]
X2D409_9ROSI	3.0e-217	74.10	Tocopherol cyclase (Fragment) OS=Juglans regia PE=2 SV=1	[more]
B7X941_HEVBR	2.0e-216	68.75	Tocopherol cyclase OS=Hevea brasiliensis GN=tc PE=2 SV=1	[more]
A0A0D2RUB9_GOSRA	2.9e-215	67.61	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G050600 PE=4 SV=1	[more]
A0A0D2TDW0_GOSRA	6.4e-215	67.42	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G050600 PE=4 SV=1	[more]

BLAST of Cp4.1LG07g02280 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G32770.1	4.5e-204	69.07	tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / suc...	[more]

BLAST of Cp4.1LG07g02280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659088514\|ref\|XP_008445022.1\|	4.7e-288	87.82	PREDICTED: tocopherol cyclase, chloroplastic isoform X1 [Cucumis melo]	[more]
gi\|778672072\|ref\|XP_011649737.1\|	6.4e-285	87.08	PREDICTED: tocopherol cyclase, chloroplastic [Cucumis sativus]	[more]
gi\|659088516\|ref\|XP_008445023.1\|	8.7e-274	86.36	PREDICTED: tocopherol cyclase, chloroplastic isoform X2 [Cucumis melo]	[more]
gi\|576317990\|gb\|AHH29648.1\|	4.4e-217	74.10	tocopherol cyclase, partial [Juglans regia]	[more]
gi\|219842174\|dbj\|BAH10644.1\|	2.8e-216	68.75	tocopherol cyclase [Hevea brasiliensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009976	tocopherol cyclase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR025893	Tocopherol_cyclase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015994	chlorophyll metabolic process
biological_process	GO:0006631	fatty acid metabolic process
biological_process	GO:0009651	response to salt stress
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0008150	biological_process
biological_process	GO:0016122	xanthophyll metabolic process
biological_process	GO:0010189	vitamin E biosynthetic process
biological_process	GO:0009266	response to temperature stimulus
biological_process	GO:0031347	regulation of defense response
biological_process	GO:0009915	phloem sucrose loading
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009534	chloroplast thylakoid
molecular_function	GO:0009976	tocopherol cyclase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g02280.1	Cp4.1LG07g02280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025893	Tocopherol cyclase	PFAM	PF14249	Tocopherol_cycl	coord: 117..498 score: 2.6E
None	No IPR available	PANTHER	PTHR35309	FAMILY NOT NAMED	coord: 36..464 score: 0.0coord: 483..540 score:
None	No IPR available	PANTHER	PTHR35309:SF2	TOCOPHEROL CYCLASE, CHLOROPLASTIC	coord: 36..464 score: 0.0coord: 483..540 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG07g02280	Cucsa.161370	Cucumber (Gy14) v1	cgycpeB0444
Cp4.1LG07g02280	CmaCh12G002570	Cucurbita maxima (Rimu)	cmacpeB203
Cp4.1LG07g02280	CmoCh12G002110	Cucurbita moschata (Rifu)	cmocpeB174
Cp4.1LG07g02280	Cla022218	Watermelon (97103) v1	cpewmB782
Cp4.1LG07g02280	Csa2G374670	Cucumber (Chinese Long) v2	cpecuB810
Cp4.1LG07g02280	MELO3C011150	Melon (DHL92) v3.5.1	cpemeB761
Cp4.1LG07g02280	ClCG08G012300	Watermelon (Charleston Gray)	cpewcgB748
Cp4.1LG07g02280	CSPI02G22340	Wild cucumber (PI 183967)	cpecpiB811
Cp4.1LG07g02280	Lsi08G010910	Bottle gourd (USVL1VR-Ls)	cpelsiB685
Cp4.1LG07g02280	MELO3C011150.2	Melon (DHL92) v3.6.1	cpemedB897
Cp4.1LG07g02280	CsaV3_2G030970	Cucumber (Chinese Long) v3	cpecucB1004
Cp4.1LG07g02280	Bhi04G000691	Wax gourd	cpewgoB1043
Cp4.1LG07g02280	CsGy2G022100	Cucumber (Gy14) v2	cgybcpeB260
Cp4.1LG07g02280	Carg03848	Silver-seed gourd	carcpeB1368

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG07g02280	Cucurbita moschata (Rifu)	cmocpeB747
Cp4.1LG07g02280	Cucumber (Gy14) v2	cgybcpeB440
Cp4.1LG07g02280	Melon (DHL92) v3.6.1	cpemedB906
Cp4.1LG07g02280	Silver-seed gourd	carcpeB0087
Cp4.1LG07g02280	Silver-seed gourd	carcpeB0907
Cp4.1LG07g02280	Cucumber (Chinese Long) v3	cpecucB1020
Cp4.1LG07g02280	Wax gourd	cpewgoB1059
Cp4.1LG07g02280	Cucurbita pepo (Zucchini)	cpecpeB138
Cp4.1LG07g02280	Cucurbita pepo (Zucchini)	cpecpeB511
Cp4.1LG07g02280	Cucurbita maxima (Rimu)	cmacpeB794