Cp4.1LG06g06670 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG06g06670
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPolynucleotidyl transferase ribonuclease H-like superfamily protein
LocationCp4.1LG06 : 4149833 .. 4153829 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAGGCGGCGTCTGGTTTCACGAGAGAAAAGAGAGCGAAGAGGACGAGAAATTGAAACATGGAATTGGAGAGATTCATGTTTGATTTGTTAAATCTCCGGAATATCAGTGTCTGGATTAGAAGAACAATGATCTTCCATTGCAGGTATTTAAATCTGAAATCTGTGAAGCATTTGATTCATTGCTGCTTTGATTTTTTTTGAATTTGCATTTTCCATTTTTTCCATTTCGATCTTCAATGGTCTCCTTGAATTAATTATTTTCTTTCATTATAATTAGAAATTTTAAAACTACCAGAACTATAATTAAAAGAAAATTCAAAGTGATATTTCAATCAACTTTTTATAATATGGATATCTACAAATTTGATAATATTTATAAAATATGTATATATATATATATATATATGTATGTTCCTGCCGCAGAATTCGACCACCCCAACGTCCGTCGTCTTCTCTGCTCCGGTAGACCGTCGGAGTGTAGACTGTACATTAGCCGCTCACTTCCGCTCATTTCAAATCAATGTTTGTGAGAGCGCCGCTGCTTAAGGTTTCGTCATTCTACTCAGTCCCATGTCATTCTCTGGTTCCGTTGTCTCTCTCTGCCGCAATTTGTTCTTCTCCACGGACACCTTTAGCTATCCGATGTCATTCATCTCTCCCCACAGCCCACGAACCATCTTCTTCGGCTCCCTCTGAATCCCTCGATGTGGTGCATAATCGTTGGAGGCCCATGTGTTTGTATTACACACAGAGCAAGTGTACAATGGTATTTTTTTTTAATTCTGGATTTGAGCTGTTGCACTTGCGTTTTTCGAATGCCTCGTTGTTTTCTTTGCTTACATTTTCTGAAGTGACTGAAGATTCTACTTGATTGTGTGTGCCATGTGGTTAGTTTGGTGTTGTACACCACATGTTCGACGATATTCCTCAGAGAACTTTTGCTCGTTTTTCTTGCGTGTTAAGCTGTCTGCTGGTTGAATTTGGTAACCCACCAGAACAAAATTGGAAATGATACGAATTTACGACCATTTTCCACTATTGATCAGACTATTGTCTTATGTTGTGTGTTCTAGTGGTTCTTACTGAAGTTCCCTAGCTGAAATTTTGCAGCCAAATTTAGATATATTCATGTGACCCTGTTTTGTAGATGGATGATCCACTCCACGTAAAGAAGTTCAACCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGCTCAAAACATATGCGAACTCAGGATATTGAGTTTTTTCTAGTGCTTGATTTGGAGGGAAAAGTTGAAATAATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACACTGGATGTGACGGGTTTTTTCCACAGGTTCTACCTGCTTCTTTGTGACCTGCTCACTCTTGCTCTTTGTTATGCATTTATTATTTATCTTTCCGCTCGGCAGATTTCATATTTTATGCATCTCTATATTTCTCTGTTACCTGTTTTTTCAAGATTTTAATCTCAAAGAGCATGTAGAAAGAATCCCTTTTAGGCTTCCCCTCAAGATTTTTAAAACGATCTTGAGGGGAAGCCCGAAAGGAAAAGCCCAATGAGGACAATATCTATTAGCGGTGGGCTTGAGATGTTATAGGATGACTTACTACCCGGATGGACATATTGATTGCATGTAATATAAGCATGGAGTAAAATGTTAGCTTAATTTGGAACCATTTTAGCATATGTAATGTGTATTTAGGAAAATCGGCTTCTGTGCGGTTGAGAGATGACACTGACCGGCTTATTATGCTTGTAACCCCATCATGTAAAATGGTTTAACTTCTAAGAACGCCAACAAATGTTCTTTGGATGATTAAGAACAAGAAATTTATGGTTTTTCTTTTTTGGTTCTACGTTCTTTGACGACTGCCTTAAATCCTTCCTCAGGTTTGTTAGGCCTTCAAGAATGAGTGAACGAAGGATAAATGAGTACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGGTATGTCTAATCTATGTGTGGTGAAGGCTTGATAATGTTCGACATTATTGTGGATTCATTTATTTCTTAGGATTTAGGACAAATATATTTCAAAACCTGATTGCATGGTGTACATGTCCAATGCTAATTAGGTAGGATGTGAGATCCCACATCGGTTAGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAAACTCTCCCTAGTAGACGCGTTTAAAAACCGTGAGGCTGACGGTGATATGTAATGGGCCAAAGTAGACAATATCTGCTATCGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGTTAGACACCGAACGGTACGCCATCGAGGACACTAGGCCCCCAAGGGGGGTGGATTGTGAGATCCCACATCAGTTGGAGTGGAGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGATGCATTTTAGAACCGTGAGGCTGACAGCGATATGTAACGGGCCAAAGCGGACAATATCTGCTAGCGGTGGGCTTGGGCTATTACATAGGACGACTTTTTCTTCGGTATGTTGACAAGTGCCGTTAAGATTCTAATAGACTTCTTTTTACTAGCTGATAGTTCCATATTATATTTTCAGTGTCTGGCATGACACAGCCATACTGTACAAGGATGTTATACAACAGTTCGAAGATTGGCTGGTTGAGCATCAGCTGTGGAGGAAGGAACTGGGTGGTGTTCTTGATCGAGCAGCATTCGTGACATGGTAAGCCTCCTTTTCTCGATCTACTTTTAAGTTTTACAATTCCTTGCTAAATTGTTCATTTATTCATATTGTGAATGTGCTATGTGTAACAGAAGTGTTGATGATTTATGCTATCTTTTACTTGTACCAGTGGAAACTGGGATATAAAAACTCAGGTCCCACATCAATGCAGTGTGTCAAACATGAAACTTCCCGACTATTTTATGGAGTGGATCAATATCAAAGATGTCTATCTCAACTTTTACCAAAAGAAGGTACGATAGTCCATCAAAATAAGAGTTTGTAGCATCTTGAGTGGGACGTAACATCGGCTAATTAAGGAGTTGATCATGGATTTATAAGTAAAGAATACATCTTCATTGGTTTGAGGCCTTTTGGGAACCAAAATCAAAGCCATGAGAACTTATGCTTAAAGTGGACAATATCATACCATTTTGGAGCCCTCGAACAAAGTACACCCTTTGTTCGACACTTGAGTTACTTTTGACTACACCTTTGAGGCTAGCAACTTCTTTGTTTGACAATTGAGGATTCTATTGACATGGCTAAGTTAAGGACATGACTCTATACCATGTTAGGAATCACGACTCTCCACAATGGTATGATATTGTCCACTTCGAACCTAAGCTCTCATAGTTTTGTTTTGGACTTCTCAAAAGGCCTCGTACTAATAGAGATAGTATTCCTCACTTATGAACCCATGATCTTCCACCAAATTAGTCAACGTGGGACTCTCTCCCAACCATCCTAACACTATCTGCTTTTGGTCACGATTCAACCTTATGTTTAGTTTCTCTGAGAATGGAGCTTACACGACCGATTATCGATGAAGTTATTTACTTTGGATGGTAATTACTAGGCGACAGGAATGGCGACGATGATGAGACAACTCGAAATACCCTTGGTGGGAAGCCATCATCTTGGTATAGATGACACAAAGAACATCGTGAGAGTGTTGCAGAGAATGGTTGCTGACGGTGCGCATTTGCAGATCACTGCTCGTAGGAATCCCAATTCTCCTCAACAAGTTAAGTTCCGTTTTGAGAACCGTATTTAATGGCGGCCATCTTCAGCAACTTATCATCAATATTTGTCTGGATGATTCTTAAATTAGCTACAAGAGATCTCATGAGGTGTAAAACTATGAACTCGTGAACATGTCGTGTATTTTTTAGCGCCTTTTTTTCTCGTTCTAACAATGGCACAAAGGAGATTGAATATTTAGAAAATTTATATTTTATTTATTGAGTTAGACTCAAACATTAG

mRNA sequence

CAAGGCGGCGTCTGGTTTCACGAGAGAAAAGAGAGCGAAGAGGACGAGAAATTGAAACATGGAATTGGAGAGATTCATGTTTGATTTGTTAAATCTCCGGAATATCAGTGTCTGGATTAGAAGAACAATGATCTTCCATTGCAGAATTCGACCACCCCAACGTCCGTCGTCTTCTCTGCTCCGGTAGACCGTCGGAGTGTAGACTGTACATTAGCCGCTCACTTCCGCTCATTTCAAATCAATGTTTGTGAGAGCGCCGCTGCTTAAGGTTTCGTCATTCTACTCAGTCCCATGTCATTCTCTGGTTCCGTTGTCTCTCTCTGCCGCAATTTGTTCTTCTCCACGGACACCTTTAGCTATCCGATGTCATTCATCTCTCCCCACAGCCCACGAACCATCTTCTTCGGCTCCCTCTGAATCCCTCGATGTGGTGCATAATCGTTGGAGGCCCATGTGTTTGTATTACACACAGAGCAAGTGTACAATGATGGATGATCCACTCCACGTAAAGAAGTTCAACCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGCTCAAAACATATGCGAACTCAGGATATTGAGTTTTTTCTAGTGCTTGATTTGGAGGGAAAAGTTGAAATAATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACACTGGATGTGACGGGTTTTTTCCACAGGTTTGTTAGGCCTTCAAGAATGAGTGAACGAAGGATAAATGAGTACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGTGTCTGGCATGACACAGCCATACTGTACAAGGATGTTATACAACAGTTCGAAGATTGGCTGGTTGAGCATCAGCTGTGGAGGAAGGAACTGGGTGGTGTTCTTGATCGAGCAGCATTCGTGACATGTGGAAACTGGGATATAAAAACTCAGGCGACAGGAATGGCGACGATGATGAGACAACTCGAAATACCCTTGGTGGGAAGCCATCATCTTGGTATAGATGACACAAAGAACATCGTGAGAGTGTTGCAGAGAATGGTTGCTGACGGTGCGCATTTGCAGATCACTGCTCGTAGGAATCCCAATTCTCCTCAACAAGTTAAGTTCCGTTTTGAGAACCGTATTTAATGGCGGCCATCTTCAGCAACTTATCATCAATATTTGTCTGGATGATTCTTAAATTAGCTACAAGAGATCTCATGAGGTGTAAAACTATGAACTCGTGAACATGTCGTGTATTTTTTAGCGCCTTTTTTTCTCGTTCTAACAATGGCACAAAGGAGATTGAATATTTAGAAAATTTATATTTTATTTATTGAGTTAGACTCAAACATTAG

Coding sequence (CDS)

ATGTTTGTGAGAGCGCCGCTGCTTAAGGTTTCGTCATTCTACTCAGTCCCATGTCATTCTCTGGTTCCGTTGTCTCTCTCTGCCGCAATTTGTTCTTCTCCACGGACACCTTTAGCTATCCGATGTCATTCATCTCTCCCCACAGCCCACGAACCATCTTCTTCGGCTCCCTCTGAATCCCTCGATGTGGTGCATAATCGTTGGAGGCCCATGTGTTTGTATTACACACAGAGCAAGTGTACAATGATGGATGATCCACTCCACGTAAAGAAGTTCAACCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGCTCAAAACATATGCGAACTCAGGATATTGAGTTTTTTCTAGTGCTTGATTTGGAGGGAAAAGTTGAAATAATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACACTGGATGTGACGGGTTTTTTCCACAGGTTTGTTAGGCCTTCAAGAATGAGTGAACGAAGGATAAATGAGTACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGTGTCTGGCATGACACAGCCATACTGTACAAGGATGTTATACAACAGTTCGAAGATTGGCTGGTTGAGCATCAGCTGTGGAGGAAGGAACTGGGTGGTGTTCTTGATCGAGCAGCATTCGTGACATGTGGAAACTGGGATATAAAAACTCAGGCGACAGGAATGGCGACGATGATGAGACAACTCGAAATACCCTTGGTGGGAAGCCATCATCTTGGTATAGATGACACAAAGAACATCGTGAGAGTGTTGCAGAGAATGGTTGCTGACGGTGCGCATTTGCAGATCACTGCTCGTAGGAATCCCAATTCTCCTCAACAAGTTAAGTTCCGTTTTGAGAACCGTATTTAA

Protein sequence

MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITARRNPNSPQQVKFRFENRI
Homology
[Close]
BLAST of Cp4.1LG06g06670 vs. Swiss-Prot
Match: Y3514_ARATH (Uncharacterized exonuclease domain-containing protein At3g15140 OS=Arabidopsis thaliana GN=At3g15140 PE=2 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 6.7e-79
Identity = 156/329 (47.42%), Postives = 209/329 (63.53%), Query Frame = 1 

Query: 4   RAPLLKVSSF----YSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPS- 63
           R  L ++S F    +S P  +L        +C+S  +       S   ++   SSS+PS 
Sbjct: 9   RVSLSRISPFRDTRFSYPA-TLALAHTKRIMCNSSHSVSPSPSPSDFSSSSSSSSSSPST 68

Query: 64  -ESLDVVHN-RWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIE 123
              ++   N RWRPMCLYYT  KCT MDDP H++ FNHD S+EL+V  A  +  ++Q+  
Sbjct: 69  FSLMETSENARWRPMCLYYTHGKCTKMDDPAHLEIFNHDCSKELRVAAADLERKKSQEFN 128

Query: 124 FFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVD 183
           FFLV+DLEGKVEI+EFP+++V+AKT++V   FHRFVRP++MSE+ IN+YIEGKYG+ GVD
Sbjct: 129 FFLVIDLEGKVEILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAINKYIEGKYGELGVD 188

Query: 184 RVWHDTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQATGMAT--- 243
           RVWHDTAI +K V+++FE WL EH LW K+    L+ AAFVTCGNWDIKT+         
Sbjct: 189 RVWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAFVTCGNWDIKTKIPEQCVVSN 248

Query: 244 ------------------------------MMRQLEIPLVGSHHLGIDDTKNIVRVLQRM 293
                                         MMRQ  I L+GSHHLGIDDTKNI RV+QRM
Sbjct: 249 INLPPYFMEWINLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHLGIDDTKNITRVVQRM 308

[Close]
BLAST of Cp4.1LG06g06670 vs. Swiss-Prot
Match: ERI1_RAT (3'-5' exoribonuclease 1 OS=Rattus norvegicus GN=Eri1 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 6.6e-10
Identity = 47/177 (26.55%), Postives = 81/177 (45.76%), Query Frame = 1 

Query: 128 EIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYK 187
           EIIEFPV+L+N  +L++   F ++VRP   S+  ++E+     G  G+ +   D A  + 
Sbjct: 146 EIIEFPVVLLNTHSLEIEDTFQQYVRPEVNSQ--LSEFC---IGLTGITQDQVDRADAFP 205

Query: 188 DVIQQFEDWLVEHQLWRKE-----LGGVLDRAAFVTC----------------------- 247
            V+++  +W+   +L  K        G  D + F+                         
Sbjct: 206 QVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLNIQCQLSRLKYPSFAKKWINIRKSY 265

Query: 248 GN-WDIKTQATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITAR 276
           GN + +    T +  M+ +L +   G  H G+DD+KNI R+  RM+ DG  L+I  +
Sbjct: 266 GNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELRINEK 317

[Close]
BLAST of Cp4.1LG06g06670 vs. Swiss-Prot
Match: ERI1_MOUSE (3'-5' exoribonuclease 1 OS=Mus musculus GN=Eri1 PE=1 SV=2)

HSP 1 Score: 64.3 bits (155), Expect = 2.5e-09
Identity = 46/177 (25.99%), Postives = 82/177 (46.33%), Query Frame = 1 

Query: 128 EIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYK 187
           EIIEFPV+L+N  TL++   F ++VRP   ++  ++E+     G  G+ +   D A  + 
Sbjct: 146 EIIEFPVVLLNTHTLEIEDTFQQYVRPEVNAQ--LSEFC---IGLTGITQDQVDRADAFP 205

Query: 188 DVIQQFEDWLVEHQL-----WRKELGGVLDRAAFVTC----------------------- 247
            V+++  +W+   +L     +     G  D + F++                        
Sbjct: 206 QVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLSIQCRLSRLKHPAFAKKWINIRKSY 265

Query: 248 GN-WDIKTQATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITAR 276
           GN + +    T +  M+ +L +   G  H G+DD+KNI R+  RM+ DG  L+I  +
Sbjct: 266 GNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELRINEK 317

[Close]
BLAST of Cp4.1LG06g06670 vs. Swiss-Prot
Match: ERI3_MOUSE (ERI1 exoribonuclease 3 OS=Mus musculus GN=Eri3 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.3e-09
Identity = 49/208 (23.56%), Postives = 89/208 (42.79%), Query Frame = 1 

Query: 113 QDIEFFLVLDLEGKV--------EIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINE 172
           Q   +FLVLD E           EIIEFP++ +N +T+++   FH +V+P  +   ++  
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 200

Query: 173 YIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEHQLWRKELGGVLD---RAAFVTCGN 232
           +        G+ +   D     + V+++ ++W+ +         G+LD   ++ FVTCG+
Sbjct: 201 FCT---ELTGIIQAMVDGQPSLQQVLERVDEWMAKE--------GLLDPNVKSIFVTCGD 260

Query: 233 WDIKTQATG--------MATMMRQ--------------------------LEIPLVGSHH 276
           WD+K    G        +A   +Q                          L +  +G  H
Sbjct: 261 WDLKVMLPGQCHYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPH 320

[Close]
BLAST of Cp4.1LG06g06670 vs. Swiss-Prot
Match: ERI1_HUMAN (3'-5' exoribonuclease 1 OS=Homo sapiens GN=ERI1 PE=1 SV=3)

HSP 1 Score: 63.9 bits (154), Expect = 3.3e-09
Identity = 46/177 (25.99%), Postives = 81/177 (45.76%), Query Frame = 1 

Query: 128 EIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYK 187
           EIIEFPV+L+N  TL++   F ++VRP   ++  ++++        G+ +   D A  + 
Sbjct: 150 EIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQ--LSDFC---ISLTGITQDQVDRADTFP 209

Query: 188 DVIQQFEDWLVEHQLWRKELGGVL-----DRAAFVTC----------------------- 247
            V+++  DW+   +L  K    +L     D + F+                         
Sbjct: 210 QVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSY 269

Query: 248 GN-WDIKTQATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITAR 276
           GN + +    T +  M+ +L +   G  H G+DD+KNI R+  RM+ DG  L+I  +
Sbjct: 270 GNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIARIAVRMLQDGCELRINEK 321

[Close]
BLAST of Cp4.1LG06g06670 vs. TrEMBL
Match: A0A0A0L4N2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G628930 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 5.1e-142
Identity = 251/325 (77.23%), Postives = 270/325 (83.08%), Query Frame = 1 

Query: 1   MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 60
           MF+RA LLK SSFYS+PCH L+P+SLS++ICSSPRTP +IRCHS+ P +HEPSSSA SE 
Sbjct: 1   MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEF 60

Query: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120
            DV  NRWRP CLY+T  +CTMMDDPLH+KKFNHDISRELQVDVA S HMRTQD ++FLV
Sbjct: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQ------------- 240
           DTAILYKDVIQQFEDWLV+HQLWRKELGGVLDRAAFVTCGNWDIKTQ             
Sbjct: 181 DTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLP 240

Query: 241 --------------------ATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 293
                               ATGMATMMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV DG
Sbjct: 241 DYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG 300

[Close]
BLAST of Cp4.1LG06g06670 vs. TrEMBL
Match: V4UR99_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010824mg PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 7.7e-90
Identity = 171/312 (54.81%), Postives = 217/312 (69.55%), Query Frame = 1 

Query: 5   APLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPSESLDVV 64
           APL   +S  + P    VPL+ +  +  +         H S   +   SSS+ S      
Sbjct: 12  APLGSPNSLSAFPFSLPVPLTRAHKLTCAQ--------HISCSCSASSSSSSSSTHQKGA 71

Query: 65  HNRWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLVLDLE 124
             RWRPMCLY+TQ KCTMMDD +H++KFNHDISR+LQVD A+ +H  +QD++FFLVLDLE
Sbjct: 72  STRWRPMCLYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDLDFFLVLDLE 131

Query: 125 GKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAI 184
           GK+EI+EFPV++++AKT+     FHRFVRPS+MSE+ IN+YIEGKYGKFGVDRVWHDTA+
Sbjct: 132 GKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTAL 191

Query: 185 LYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQ----------------- 244
            +K+VIQQFE WL++H LW K  GG L RAAF TCGNWD+KT+                 
Sbjct: 192 PFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFM 251

Query: 245 -------ATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITARRNPNS 293
                  ATGM  MM+  ++P+ GSHHLGIDDTKNI RVLQRM+ADGA +QITARRNP+S
Sbjct: 252 EWINLKDATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNPDS 311

[Close]
BLAST of Cp4.1LG06g06670 vs. TrEMBL
Match: A0A0E0LBG3_ORYPU (Uncharacterized protein OS=Oryza punctata PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 6.7e-86
Identity = 155/283 (54.77%), Postives = 213/283 (75.27%), Query Frame = 1 

Query: 19  HSLV-PLSLSAAICSSPRTP--------LAIRCHSSLPTAHEPSSSAPSESLDVVHNRWR 78
           HSL+ P S S +    PR P         A+   S LP+A    +   +         W+
Sbjct: 18  HSLLRPFSSSPSSVLRPRVPHQRGFPIAAALSQASPLPSAEGDGAVMEAPPRPSTRCPWK 77

Query: 79  PMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLVLDLEGKVEI 138
           P CLYYTQ KCTM++D LH++KFNH++S +L V+ +++  +++Q +++FLVLDLEGKVEI
Sbjct: 78  PTCLYYTQGKCTMLNDTLHLEKFNHNLSTDLPVNPSAADKVKSQKLDYFLVLDLEGKVEI 137

Query: 139 IEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDV 198
           +EFPV+++NA++++    FHRFV P+ MSE+RI EYIEGKYGKFGVDRVWHDTAI + +V
Sbjct: 138 LEFPVVMINAQSMEFVDSFHRFVHPTAMSEQRIREYIEGKYGKFGVDRVWHDTAIPFMEV 197

Query: 199 IQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQATGMATMMRQLEIPLVGSHHLG 258
           +Q+FEDW+ +H+LW+KE GG L+ AAF+TCGNWD+KT+ATGM TMMR+L++P+VGSHHLG
Sbjct: 198 LQEFEDWIEDHKLWKKEQGGALNSAAFITCGNWDLKTKATGMMTMMRELQMPIVGSHHLG 257

Query: 259 IDDTKNIVRVLQRMVADGAHLQITARRNPNSPQQVKFRFENRI 293
           IDD+KNI RV+Q M+ADGA +QITA+R  ++   VKF F+NRI
Sbjct: 258 IDDSKNIARVVQHMLADGAVMQITAKRQ-SATGDVKFLFKNRI 299

[Close]
BLAST of Cp4.1LG06g06670 vs. TrEMBL
Match: A0A061FF71_THECC (Polynucleotidyl transferase, ribonuclease H-like superfamily protein, putative OS=Theobroma cacao GN=TCM_031646 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 6.7e-86
Identity = 177/333 (53.15%), Postives = 216/333 (64.86%), Query Frame = 1 

Query: 2   FVRAPLLKVSSFYSVPCHSLV-PLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 61
           FV +  + VS  ++    SL  PL+    I + PR P    C  S+     P SS+PS S
Sbjct: 3   FVNSTGIPVSRIFAFCSRSLSSPLTNPFFISTLPRVP---SCKFSITAQFSPPSSSPSSS 62

Query: 62  LDV--------VHNRWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRT 121
             +          +RWRPMCLYYTQ KCT MDDP H++KF+HD SR+LQV+  S +   +
Sbjct: 63  SSMNTQVGFSSSSSRWRPMCLYYTQGKCTKMDDPFHLEKFSHDCSRDLQVNATSIEKKCS 122

Query: 122 QDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGK 181
           Q+ +FFLVLDLEGKVEI+EFPV+L++AKTL V  FFHRFVRPS MSE+ IN+YIEGKYGK
Sbjct: 123 QNKDFFLVLDLEGKVEILEFPVLLMDAKTLRVVDFFHRFVRPSEMSEQAINKYIEGKYGK 182

Query: 182 FGVDRVWHDTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQATGMA 241
           FGVDRVWHDTA  +K+VIQQFE WL +HQLW K+ GG   +AAFVTCGNWD+KT+     
Sbjct: 183 FGVDRVWHDTAQPFKEVIQQFEAWLTQHQLWEKKGGGSFTQAAFVTCGNWDLKTKVPQQC 242

Query: 242 ---------------------------------TMMRQLEIPLVGSHHLGIDDTKNIVRV 293
                                            +MM+QLEIP  GSHHLGIDDT NI RV
Sbjct: 243 KVSGIKLPPYFMEWINLKDVYLNFYGREARGMMSMMKQLEIPSFGSHHLGIDDTINIARV 302

[Close]
BLAST of Cp4.1LG06g06670 vs. TrEMBL
Match: E0CSF1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02090 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 2.6e-85
Identity = 155/255 (60.78%), Postives = 190/255 (74.51%), Query Frame = 1 

Query: 71  MCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLVLDLEGKVEII 130
           MCLYYTQ KCT MDDP H++ FNH+ SRELQV+ A+ +H+++Q ++FFLVLDLEGK+EI+
Sbjct: 1   MCLYYTQGKCTKMDDPTHLETFNHNCSRELQVNAANFQHLQSQHLDFFLVLDLEGKIEIL 60

Query: 131 EFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVI 190
           EFPV+++NAKT+DV   FHRFVRPS MSE+RINEYIEGKYGK GVDRVWHDT+I +K+VI
Sbjct: 61  EFPVLMINAKTMDVVDLFHRFVRPSEMSEQRINEYIEGKYGKLGVDRVWHDTSIPFKEVI 120

Query: 191 QQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQATGMATMMRQ------LE----- 250
           QQFE WL +H LW KE+GG LD+AAFVTCGNWD+KT+      + +       +E     
Sbjct: 121 QQFEAWLTQHHLWTKEMGGRLDQAAFVTCGNWDLKTKVPQQCKVSKMKLPPYFMEWINLK 180

Query: 251 ----------------------IPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITARRN 293
                                 IPL+GSHHLGIDDTKNI RVLQRM+ADGA LQITARRN
Sbjct: 181 DVYLNFYKRRATGMMTMMKELQIPLLGSHHLGIDDTKNIARVLQRMLADGALLQITARRN 240

[Close]
BLAST of Cp4.1LG06g06670 vs. TAIR10
Match: AT3G15140.1 (AT3G15140.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 295.4 bits (755), Expect = 3.8e-80
Identity = 156/329 (47.42%), Postives = 209/329 (63.53%), Query Frame = 1 

Query: 4   RAPLLKVSSF----YSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPS- 63
           R  L ++S F    +S P  +L        +C+S  +       S   ++   SSS+PS 
Sbjct: 9   RVSLSRISPFRDTRFSYPA-TLALAHTKRIMCNSSHSVSPSPSPSDFSSSSSSSSSSPST 68

Query: 64  -ESLDVVHN-RWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIE 123
              ++   N RWRPMCLYYT  KCT MDDP H++ FNHD S+EL+V  A  +  ++Q+  
Sbjct: 69  FSLMETSENARWRPMCLYYTHGKCTKMDDPAHLEIFNHDCSKELRVAAADLERKKSQEFN 128

Query: 124 FFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVD 183
           FFLV+DLEGKVEI+EFP+++V+AKT++V   FHRFVRP++MSE+ IN+YIEGKYG+ GVD
Sbjct: 129 FFLVIDLEGKVEILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAINKYIEGKYGELGVD 188

Query: 184 RVWHDTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQATGMAT--- 243
           RVWHDTAI +K V+++FE WL EH LW K+    L+ AAFVTCGNWDIKT+         
Sbjct: 189 RVWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAFVTCGNWDIKTKIPEQCVVSN 248

Query: 244 ------------------------------MMRQLEIPLVGSHHLGIDDTKNIVRVLQRM 293
                                         MMRQ  I L+GSHHLGIDDTKNI RV+QRM
Sbjct: 249 INLPPYFMEWINLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHLGIDDTKNITRVVQRM 308

[Close]
BLAST of Cp4.1LG06g06670 vs. NCBI nr
Match: gi|449456609|ref|XP_004146041.1| (PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 [Cucumis sativus])

HSP 1 Score: 511.9 bits (1317), Expect = 7.3e-142
Identity = 251/325 (77.23%), Postives = 270/325 (83.08%), Query Frame = 1 

Query: 1   MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 60
           MF+RA LLK SSFYS+PCH L+P+SLS++ICSSPRTP +IRCHS+ P +HEPSSSA SE 
Sbjct: 1   MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEF 60

Query: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120
            DV  NRWRP CLY+T  +CTMMDDPLH+KKFNHDISRELQVDVA S HMRTQD ++FLV
Sbjct: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQ------------- 240
           DTAILYKDVIQQFEDWLV+HQLWRKELGGVLDRAAFVTCGNWDIKTQ             
Sbjct: 181 DTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLP 240

Query: 241 --------------------ATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 293
                               ATGMATMMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV DG
Sbjct: 241 DYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG 300

[Close]
BLAST of Cp4.1LG06g06670 vs. NCBI nr
Match: gi|659127446|ref|XP_008463707.1| (PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 [Cucumis melo])

HSP 1 Score: 477.6 bits (1228), Expect = 1.5e-131
Identity = 235/325 (72.31%), Postives = 260/325 (80.00%), Query Frame = 1 

Query: 1   MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 60
           MF+RA LLK+SSFYS+PCH L+P+SLS++ICSSPRTP +IRCHS+LP +HEPSSSAPS+ 
Sbjct: 1   MFLRASLLKLSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSQF 60

Query: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120
            DV  NRWRP CLY+T  +CTMMDDPLH+KKFNHDISRELQVDVA S HMRTQD+++FLV
Sbjct: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQATGMATM------ 240
           DTAILY DVIQQFEDWLV+HQLWRKE GGVLDRAAFVTCGNWDIKTQ      +      
Sbjct: 181 DTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLP 240

Query: 241 --------MRQLEIPLVGSH-------------------HLGIDDTKNIVRVLQRMVADG 293
                   ++ + +   G                     HLGIDDTKNIVRVLQRMV DG
Sbjct: 241 DYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDG 300

[Close]
BLAST of Cp4.1LG06g06670 vs. NCBI nr
Match: gi|778695817|ref|XP_011654056.1| (PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isoform X2 [Cucumis sativus])

HSP 1 Score: 391.3 bits (1004), Expect = 1.4e-105
Identity = 194/243 (79.84%), Postives = 202/243 (83.13%), Query Frame = 1 

Query: 83  MDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTL 142
           MDDPLH+KKFNHDISRELQVDVA S HMRTQD ++FLVLDLEGKVEIIEFPVILVNAKT+
Sbjct: 1   MDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTM 60

Query: 143 DVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEHQL 202
            VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLV+HQL
Sbjct: 61  GVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQHQL 120

Query: 203 WRKELGGVLDRAAFVTCGNWDIKTQ---------------------------------AT 262
           WRKELGGVLDRAAFVTCGNWDIKTQ                                 AT
Sbjct: 121 WRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYTKKAT 180

Query: 263 GMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITARRNPNSPQQVKFRFE 293
           GMATMMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV DGAHLQ+TARRNP SPQ VKF FE
Sbjct: 181 GMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGAHLQVTARRNPKSPQHVKFLFE 240

[Close]
BLAST of Cp4.1LG06g06670 vs. NCBI nr
Match: gi|659127448|ref|XP_008463708.1| (PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isoform X2 [Cucumis melo])

HSP 1 Score: 352.8 bits (904), Expect = 5.6e-94
Identity = 177/243 (72.84%), Postives = 189/243 (77.78%), Query Frame = 1 

Query: 83  MDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTL 142
           MDDPLH+KKFNHDISRELQVDVA S HMRTQD+++FLVLDLEGKVEIIEFPVILVNAKT+
Sbjct: 1   MDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTM 60

Query: 143 DVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEHQL 202
            VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWHDTAILY DVIQQFEDWLV+HQL
Sbjct: 61  GVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWHDTAILYNDVIQQFEDWLVQHQL 120

Query: 203 WRKELGGVLDRAAFVTCGNWDIKTQATGMATM--------------MRQLEIPLVGSH-- 262
           WRKE GGVLDRAAFVTCGNWDIKTQ      +              ++ + +   G    
Sbjct: 121 WRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKAT 180

Query: 263 -----------------HLGIDDTKNIVRVLQRMVADGAHLQITARRNPNSPQQVKFRFE 293
                            HLGIDDTKNIVRVLQRMV DGAHLQITARRNP SPQQVKF FE
Sbjct: 181 GMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDGAHLQITARRNPKSPQQVKFLFE 240

[Close]
BLAST of Cp4.1LG06g06670 vs. NCBI nr
Match: gi|225461547|ref|XP_002282697.1| (PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 [Vitis vinifera])

HSP 1 Score: 339.0 bits (868), Expect = 8.4e-90
Identity = 174/319 (54.55%), Postives = 217/319 (68.03%), Query Frame = 1 

Query: 9   KVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPS--SSAPSESLDVVHN 68
           +VS F      SL+P   S +  S P     +    S P    PS  +++P  S     +
Sbjct: 5   RVSPFRYGSLSSLIPYVSSPSSLSPPVRTFTLSASISTPHPSPPSLLTASPKAS-----D 64

Query: 69  RWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLVLDLEGK 128
           RWRPMCLYYTQ KCT MDDP H++ FNH+ SRELQV+ A+ +H+++Q ++FFLVLDLEGK
Sbjct: 65  RWRPMCLYYTQGKCTKMDDPTHLETFNHNCSRELQVNAANFQHLQSQHLDFFLVLDLEGK 124

Query: 129 VEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILY 188
           +EI+EFPV+++NAKT+DV   FHRFVRPS MSE+RINEYIEGKYGK GVDRVWHDT+I +
Sbjct: 125 IEILEFPVLMINAKTMDVVDLFHRFVRPSEMSEQRINEYIEGKYGKLGVDRVWHDTSIPF 184

Query: 189 KDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQATGMATMMRQ------LE- 248
           K+VIQQFE WL +H LW KE+GG LD+AAFVTCGNWD+KT+      + +       +E 
Sbjct: 185 KEVIQQFEAWLTQHHLWTKEMGGRLDQAAFVTCGNWDLKTKVPQQCKVSKMKLPPYFMEW 244

Query: 249 --------------------------IPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQIT 293
                                     IPL+GSHHLGIDDTKNI RVLQRM+ADGA LQIT
Sbjct: 245 INLKDVYLNFYKRRATGMMTMMKELQIPLLGSHHLGIDDTKNIARVLQRMLADGALLQIT 304

The following BLAST results are available for this feature:
BLAST of Cp4.1LG06g06670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y3514_ARATH6.7e-7947.42Uncharacterized exonuclease domain-containing protein At3g15140 OS=Arabidopsis t... [more]
ERI1_RAT6.6e-1026.553'-5' exoribonuclease 1 OS=Rattus norvegicus GN=Eri1 PE=2 SV=1[more]
ERI1_MOUSE2.5e-0925.993'-5' exoribonuclease 1 OS=Mus musculus GN=Eri1 PE=1 SV=2[more]
ERI3_MOUSE3.3e-0923.56ERI1 exoribonuclease 3 OS=Mus musculus GN=Eri3 PE=1 SV=1[more]
ERI1_HUMAN3.3e-0925.993'-5' exoribonuclease 1 OS=Homo sapiens GN=ERI1 PE=1 SV=3[more]
BLAST of Cp4.1LG06g06670 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4N2_CUCSA5.1e-14277.23Uncharacterized protein OS=Cucumis sativus GN=Csa_4G628930 PE=4 SV=1[more]
V4UR99_9ROSI7.7e-9054.81Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010824mg PE=4 SV=1[more]
A0A0E0LBG3_ORYPU6.7e-8654.77Uncharacterized protein OS=Oryza punctata PE=4 SV=1[more]
A0A061FF71_THECC6.7e-8653.15Polynucleotidyl transferase, ribonuclease H-like superfamily protein, putative O... [more]
E0CSF1_VITVI2.6e-8560.78Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02090 PE=4 SV=... [more]
BLAST of Cp4.1LG06g06670 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G15140.13.8e-8047.42 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
BLAST of Cp4.1LG06g06670 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449456609|ref|XP_004146041.1|7.3e-14277.23PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isofo... [more]
gi|659127446|ref|XP_008463707.1|1.5e-13172.31PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isofo... [more]
gi|778695817|ref|XP_011654056.1|1.4e-10579.84PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isofo... [more]
gi|659127448|ref|XP_008463708.1|5.6e-9472.84PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isofo... [more]
gi|225461547|ref|XP_002282697.1|8.4e-9054.55PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 [Viti... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004527 exonuclease activity
molecular_function GO:0016740 transferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG06g06670.1Cp4.1LG06g06670.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 111..227
score: 5.1E-22coord: 228..274
score: 2.1
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 115..272
score: 1.3
NoneNo IPR availablePANTHERPTHR230443'-5' EXONUCLEASE ERI1-RELATEDcoord: 64..288
score: 8.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG06g06670Cucsa.122830Cucumber (Gy14) v1cgycpeB0312
Cp4.1LG06g06670CmaCh09G008360Cucurbita maxima (Rimu)cmacpeB060
Cp4.1LG06g06670CmoCh09G008310Cucurbita moschata (Rifu)cmocpeB034
Cp4.1LG06g06670Cla023352Watermelon (97103) v1cpewmB775
Cp4.1LG06g06670Csa4G628930Cucumber (Chinese Long) v2cpecuB783
Cp4.1LG06g06670MELO3C025618Melon (DHL92) v3.5.1cpemeB732
Cp4.1LG06g06670ClCG11G017740Watermelon (Charleston Gray)cpewcgB694
Cp4.1LG06g06670CSPI04G23140Wild cucumber (PI 183967)cpecpiB785
Cp4.1LG06g06670Lsi04G020400Bottle gourd (USVL1VR-Ls)cpelsiB637
Cp4.1LG06g06670MELO3C025618.2Melon (DHL92) v3.6.1cpemedB865
Cp4.1LG06g06670CsaV3_4G033360Cucumber (Chinese Long) v3cpecucB0970
Cp4.1LG06g06670Bhi09G002841Wax gourdcpewgoB1000
Cp4.1LG06g06670CsGy4G021530Cucumber (Gy14) v2cgybcpeB563
Cp4.1LG06g06670Carg17073Silver-seed gourdcarcpeB0245
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG06g06670Cucurbita pepo (Zucchini)cpecpeB059
Cp4.1LG06g06670Cucurbita pepo (Zucchini)cpecpeB460
Cp4.1LG06g06670Cucurbita pepo (Zucchini)cpecpeB468
Cp4.1LG06g06670Cucumber (Gy14) v1cgycpeB0330
Cp4.1LG06g06670Cucurbita maxima (Rimu)cmacpeB250
Cp4.1LG06g06670Cucurbita maxima (Rimu)cmacpeB503
Cp4.1LG06g06670Cucurbita maxima (Rimu)cmacpeB508
Cp4.1LG06g06670Cucurbita moschata (Rifu)cmocpeB215
Cp4.1LG06g06670Cucurbita moschata (Rifu)cmocpeB461
Cp4.1LG06g06670Cucurbita moschata (Rifu)cmocpeB464
Cp4.1LG06g06670Wild cucumber (PI 183967)cpecpiB771
Cp4.1LG06g06670Cucumber (Chinese Long) v2cpecuB770
Cp4.1LG06g06670Bottle gourd (USVL1VR-Ls)cpelsiB635
Cp4.1LG06g06670Bottle gourd (USVL1VR-Ls)cpelsiB641
Cp4.1LG06g06670Watermelon (Charleston Gray)cpewcgB695
Cp4.1LG06g06670Watermelon (97103) v1cpewmB776
Cp4.1LG06g06670Melon (DHL92) v3.5.1cpemeB709
Cp4.1LG06g06670Silver-seed gourdcarcpeB0434
Cp4.1LG06g06670Silver-seed gourdcarcpeB0947
Cp4.1LG06g06670Wax gourdcpewgoB0998