CmaCh09G008360 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G008360
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	ERI1 exoribonuclease 2
Location	Cma_Chr09 : 4119935 .. 4123637 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGTGAGAGCGCCGCTGCTTAAGGTTTCATCATTCTACTCAATCCCATGTCATTCTCTGGTTCCGTTGTCTCTCTCTTCCGCAATTTGTTCTTCTCCACGGACACCTTTAGCTATCCGATGTCATTCATCTCTCCCCACAGCCCACGAACCATCTTCTTCGGCTCCCTCTGAATCCCTCGATGTGGTGCATAATCGTTGGAGACCCATGTGTTTGTATTACACACAGAGCAAGTGTACAATGGTATTTTTTTTTAATTCTGGATTTGAGCTTTTGCACTTGCGTTTTTCGAATGCCTCTTTGTTTTCTTTGCTTACATTTTCTAAAGTGACTGAAGATTCTACTTGATTGTGTGTGCCATGTGGTTAGTTTGGTGTTGTACACCACATGTTCGACGATATTCCTCAGAGAACTTTTGCTCGTTTTTCTTGCGTGTTAAGCTGCCTGCTAGTTGAATTTTGTAACCCACCAGAACAAAATTGGAAATGATACGAATTTACGACCATTTTCCACTATTGATCAGACTATTGTCTTATGTTGTGTGTTCTGGTGGTTCTGACTGAAGTTCCCTAGCTGATATTTCGCAGCCAAATTTAGATATTCATGTGACCCTGTTTTGTAGATGGATGATCCACTCCACATAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAGGTGGATGTTGCTAGCTCAAAACATATGCGAACTCAGGATATTGAGTTTTTTCTAGTGCTTGATTTGGAGGGTAAAGTTGAAATAATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACACTGGATGTGACGGGTTTTTTCCACAGGTTCTACCTGCTTCTTTGTGACGTGCTCATTCTTGCTCTTTGTTATGCATTTATTTATCTTTCCGCTGGGCAGATTTCATATTTTATGCATCTCTATGTTTTCCTGTTACCTGTTTTTTCTTCTTAATAAATCTGCAAAGATTTTAATCTCAAAGAGCATGCAGAAGGAATTACCTGAATACCCATCCACACACATTTGTCTTCTTTGGGCTTTCCCTTCAAAGTTTTTAAAATGCGTCGGTTAAGGAGAGGTTTCCACACCCTTGTAAAAAATGGTTCATTCTCCTCCCCAACCGATGTGGGGTCTCACAATTCAACTCCTTTGGGGCCCAGCGTCCTCGCTGACACTCGTTCCCCTCTCCAATCGGTGTGGGAACTCACACCTTACTACCCCTTTACCTTACTTACATTTCCTGATGGGCATATTGATTGCATGTAATATAAGCGTGGGGTAAAATGTTCGCTTAATTTGGAACCATTTTAGCATATGTAATGTGTAGTTAGGAAAATCGGCTTCTGTGCGGTTGAGAGATGACACTGACCGGCTTATTATGCTTGTAACCCCATCATGTAAAATGGTTTAACTTCTAAGAATGCCAACAAATGTTCTTTGGATGATTAAGAACAAGAAATTTATGGTTTTTCTTTTTTGGTTCTACGTTCTTTGACGACTGCCTTAAATCCTTCCTCAGGTTTGTTAGGCCTTCAAGAATGAGTGAACGAAGGATAAATGAGTACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGGTATGTCTAATCTATGTATGGTGAAGGCTTGATAATGTTCGACATTATTGTGGATTCATTTATTTCTTAGGCCTTAGTACAAATATATTTCAAAACCCGATTGTATGGTGTACATGTCCAGTGCTAATTAGGTAGAATTAGATAGAATGTGAGATCCCACCCCGGTTGGAGAGGGGAATGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCTCTAGTAGACGCGTTTAAAAACCGTGAGGCGGACGGTGATATGTAATGGGCCAAAGTGGACAATATCTGCTCGCGGTGGGCTTGGGTTGTTACAAATGGTATCAGAGCTAGACACCGAGCGGTGCGCCATCAAGGACGCTAGGTCCCCAAGGGGGGTGGATTGTGAGATCCCACATCAGTTGGAGTGGAGAACGAAGCATTCCTTATAAGGGTGTGAAAATCTCTCCTTAGTAGATGCGTTTTAGAACCGTGAAGCTGACGGCGATATGTAACGGCCCAAAGCGGACAATATCTGCTAGCAGTGGGCTTGGGCTATTACATAGGACGACTTTTTCTTCGGTATGTTGACAAGTACCGTTAAGATTCTAATGGACTTCTTTTACTAGCTGATAGTTCCATATTATATTTGCAGTGTCTGGCATGACACAGCCATACTGTACAAGGATGTTATACAACAGTTCGAAGATTGGCTGGTTGAGCATCAGATATGGAGGAAGGATCTGGGTGGTGTTCTTGATCGAGCAGCATTCGTGACATGGTAAGCCTCCTTTTCTCGATCTACTTTTAAGCGTTACAATTCCTTGCTAAATTGTTCATTTATTCATATTGTGAATGTGCTATGTGTAACAGAAGTGTTAATGATTTATGCCATCTTTTACTTGTACCAGTGGAAACTGGGATATAAAAACTCAGGTCCCACATCAATGCAGCGTGTCAAACATGAAACTTCCTGACTATTTTATGGAGTGGATCAATATCAAAGATGTCTATCTCAACTTTTACCAAAAGAAGGTACGATAGTCCTTCCATCAAAATAAGAGTTTATAGCATCTTGAGTGGGGTGTAACATCGATTAATTAAGGAGTTGATCATGGGTTTATAAGTAAGGAATATATCTTCATTGGTTTGAGGCCTTTTGGGAGCCAAAATCAAAGCCACGAGAGCTTATGCTCAGAGTGGACAATATCATACCATTTTGGAGCCCTCGAACAAAGTACACCATTTGTTTGGACACTTGAGTCACTTTTGACTACACCTTTGAGACTAGCAACTTCTTTGTTCGACACTTGAGGATTCTATTGATATGGCTAAGTTAAGGGCATGACTCTAATACCATGTTAGGAATCATGACTCTCCACAATAGTATGATATTGTCCACTTCGAGCATAAGCTCTCATGGTTTTGGTTTGGGCTTCTCAAAAGATCTCATACGAATGGAGATAGTACTCCTCACTTATAAACCCATGATCTTCCACTAAATTAGCGATTAGTTTCTGTGAGAATGGAGCTTACACGACCCATTATTGATGAAGTTCTTTACTTTGGATGGTAATTGATAGGCAACAGGAATGGCGATGATGATGAGACAACTCGAAATACCCTTGGTGGGAAGCCATCATCTTGGTATAGATGACACAAAGAACATCGTGAGAGTGTTGCAGAGAATGGTTGCTGATGGTGCACATTTGCAAATCACTGCTCGTAGGAATCCCAATTCTCCTCAACATGTTAAGTTTCATTTTGAGAACCGTATTTAATGGCGGCCATCTTCAGCAACTTATCATCAATATTTGTCTGGATGATTCTTAAATTAGCTACAAGAGATCTCATGAGTTGTAAAACTATGAGCGAGAACGTGTCCTGGTAGGTGTATTTTTCAGCGCCTTTTTTCCTCCTGGAGGAGGAGATTGAATATTTAGAATGATAATTGATATTTTATTTATTGAGTTAGGCTCAAATATTAGAAATAAGTTTACCTTCAAACTTCTTGTATGGATAGCAAGATGGTTCGAATTATTATATTTTAGCGAGTGTTCATGCATTAATTATGTAACAGCTTTCGTTAGCCTCACGATTTTAAAACACGTCTACTTGAAAGAGGTTTCCACA

mRNA sequence

ATGTTTGTGAGAGCGCCGCTGCTTAAGGTTTCATCATTCTACTCAATCCCATGTCATTCTCTGGTTCCGTTGTCTCTCTCTTCCGCAATTTGTTCTTCTCCACGGACACCTTTAGCTATCCGATGTCATTCATCTCTCCCCACAGCCCACGAACCATCTTCTTCGGCTCCCTCTGAATCCCTCGATGTGGTGCATAATCGTTGGAGACCCATGTGTTTGTATTACACACAGAGCAAGTGTACAATGATGGATGATCCACTCCACATAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAGGTGGATGTTGCTAGCTCAAAACATATGCGAACTCAGGATATTGAGTTTTTTCTAGTGCTTGATTTGGAGGGTAAAGTTGAAATAATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACACTGGATGTGACGGGTTTTTTCCACAGGTTTGTTAGGCCTTCAAGAATGAGTGAACGAAGGATAAATGAGTACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGTGTCTGGCATGACACAGCCATACTGTACAAGGATGTTATACAACAGTTCGAAGATTGGCTGGTTGAGCATCAGATATGGAGGAAGGATCTGGGTGGTGTTCTTGATCGAGCAGCATTCGTGACATGTGGAAACTGGGATATAAAAACTCAGGTCCCACATCAATGCAGCGTGTCAAACATGAAACTTCCTGACTATTTTATGGAGTGGATCAATATCAAAGATGTCTATCTCAACTTTTACCAAAAGAAGGCAACAGGAATGGCGATGATGATGAGACAACTCGAAATACCCTTGGTGGGAAGCCATCATCTTGGTATAGATGACACAAAGAACATCGTGAGAGTGTTGCAGAGAATGGTTGCTGATGGTGCACATTTGCAAATCACTGCTCGTAGGAATCCCAATTCTCCTCAACATGTTAAGTTTCATTTTGAGAACCGTATTTAATGGCGGCCATCTTCAGCAACTTATCATCAATATTTGTCTGGATGATTCTTAAATTAGCTACAAGAGATCTCATGAGTTGTAAAACTATGAGCGAGAACGTGTCCTGGTAGGTGTATTTTTCAGCGCCTTTTTTCCTCCTGGAGGAGGAGATTGAATATTTAGAATGATAATTGATATTTTATTTATTGAGTTAGGCTCAAATATTAGAAATAAGTTTACCTTCAAACTTCTTGTATGGATAGCAAGATGGTTCGAATTATTATATTTTAGCGAGTGTTCATGCATTAATTATGTAACAGCTTTCGTTAGCCTCACGATTTTAAAACACGTCTACTTGAAAGAGGTTTCCACA

Coding sequence (CDS)

ATGTTTGTGAGAGCGCCGCTGCTTAAGGTTTCATCATTCTACTCAATCCCATGTCATTCTCTGGTTCCGTTGTCTCTCTCTTCCGCAATTTGTTCTTCTCCACGGACACCTTTAGCTATCCGATGTCATTCATCTCTCCCCACAGCCCACGAACCATCTTCTTCGGCTCCCTCTGAATCCCTCGATGTGGTGCATAATCGTTGGAGACCCATGTGTTTGTATTACACACAGAGCAAGTGTACAATGATGGATGATCCACTCCACATAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAGGTGGATGTTGCTAGCTCAAAACATATGCGAACTCAGGATATTGAGTTTTTTCTAGTGCTTGATTTGGAGGGTAAAGTTGAAATAATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACACTGGATGTGACGGGTTTTTTCCACAGGTTTGTTAGGCCTTCAAGAATGAGTGAACGAAGGATAAATGAGTACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGTGTCTGGCATGACACAGCCATACTGTACAAGGATGTTATACAACAGTTCGAAGATTGGCTGGTTGAGCATCAGATATGGAGGAAGGATCTGGGTGGTGTTCTTGATCGAGCAGCATTCGTGACATGTGGAAACTGGGATATAAAAACTCAGGTCCCACATCAATGCAGCGTGTCAAACATGAAACTTCCTGACTATTTTATGGAGTGGATCAATATCAAAGATGTCTATCTCAACTTTTACCAAAAGAAGGCAACAGGAATGGCGATGATGATGAGACAACTCGAAATACCCTTGGTGGGAAGCCATCATCTTGGTATAGATGACACAAAGAACATCGTGAGAGTGTTGCAGAGAATGGTTGCTGATGGTGCACATTTGCAAATCACTGCTCGTAGGAATCCCAATTCTCCTCAACATGTTAAGTTTCATTTTGAGAACCGTATTTAA

Protein sequence

MFVRAPLLKVSSFYSIPCHSLVPLSLSSAICSSPRTPLAIRCHSSLPTAHEPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEHQIWRKDLGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLPDYFMEWINIKDVYLNFYQKKATGMAMMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITARRNPNSPQHVKFHFENRI

Homology

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BLAST of CmaCh09G008360 vs. Swiss-Prot
Match: Y3514_ARATH (Uncharacterized exonuclease domain-containing protein At3g15140 OS=Arabidopsis thaliana GN=At3g15140 PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 1.3e-102
Identity = 182/329 (55.32%), Postives = 241/329 (73.25%), Query Frame = 1


Query: 4   RAPLLKVSSF----YSIPCHSLVPLSLSSAICSSPRTPLAIRCHSSLPTAHEPSSSAPS- 63
           R  L ++S F    +S P  +L        +C+S  +       S   ++   SSS+PS 
Sbjct: 9   RVSLSRISPFRDTRFSYPA-TLALAHTKRIMCNSSHSVSPSPSPSDFSSSSSSSSSSPST 68

Query: 64  -ESLDVVHN-RWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIE 123
              ++   N RWRPMCLYYT  KCT MDDP H++ FNHD S+EL+V  A  +  ++Q+  
Sbjct: 69  FSLMETSENARWRPMCLYYTHGKCTKMDDPAHLEIFNHDCSKELRVAAADLERKKSQEFN 128

Query: 124 FFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVD 183
           FFLV+DLEGKVEI+EFP+++V+AKT++V   FHRFVRP++MSE+ IN+YIEGKYG+ GVD
Sbjct: 129 FFLVIDLEGKVEILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAINKYIEGKYGELGVD 188

Query: 184 RVWHDTAILYKDVIQQFEDWLVEHQIWRKDLGGVLDRAAFVTCGNWDIKTQVPHQCSVSN 243
           RVWHDTAI +K V+++FE WL EH +W KD    L+ AAFVTCGNWDIKT++P QC VSN
Sbjct: 189 RVWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAFVTCGNWDIKTKIPEQCVVSN 248

Query: 244 MKLPDYFMEWINIKDVYLNFYQKKATGMAMMMRQLEIPLVGSHHLGIDDTKNIVRVLQRM 303
           + LP YFMEWIN+KDVYLNFY ++A GM  MMRQ  I L+GSHHLGIDDTKNI RV+QRM
Sbjct: 249 INLPPYFMEWINLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHLGIDDTKNITRVVQRM 308

Query: 304 VADGAHLQITARRNPNSPQHVKFHFENRI 326
           +++GA L++TARR+ ++ ++V+F F+NRI
Sbjct: 309 LSEGAVLKLTARRSKSNMRNVEFLFKNRI 336

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BLAST of CmaCh09G008360 vs. Swiss-Prot
Match: ERI1_RAT (3'-5' exoribonuclease 1 OS=Rattus norvegicus GN=Eri1 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.8e-23
Identity = 58/183 (31.69%), Postives = 102/183 (55.74%), Query Frame = 1


Query: 128 EIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYK 187
           EIIEFPV+L+N  +L++   F ++VRP   S+  ++E+     G  G+ +   D A  + 
Sbjct: 146 EIIEFPVVLLNTHSLEIEDTFQQYVRPEVNSQ--LSEFC---IGLTGITQDQVDRADAFP 205

Query: 188 DVIQQFEDWLVEHQIWRKDLGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLPDYFMEWI 247
            V+++  +W+   ++      G   +   +T G+WD+   +  QC +S +K P +  +WI
Sbjct: 206 QVLKKVIEWMKSKEL------GTKYKYCILTDGSWDMSKFLNIQCQLSRLKYPSFAKKWI 265

Query: 248 NIKDVYLNFYQ--KKATGMAMMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQI 307
           NI+  Y NFY+  +  T + +M+ +L +   G  H G+DD+KNI R+  RM+ DG  L+I
Sbjct: 266 NIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELRI 317

Query: 308 TAR 309
             +
Sbjct: 326 NEK 317

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BLAST of CmaCh09G008360 vs. Swiss-Prot
Match: ERI1_MOUSE (3'-5' exoribonuclease 1 OS=Mus musculus GN=Eri1 PE=1 SV=2)

HSP 1 Score: 108.6 bits (270), Expect = 1.3e-22
Identity = 58/183 (31.69%), Postives = 102/183 (55.74%), Query Frame = 1


Query: 128 EIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYK 187
           EIIEFPV+L+N  TL++   F ++VRP   ++  ++E+     G  G+ +   D A  + 
Sbjct: 146 EIIEFPVVLLNTHTLEIEDTFQQYVRPEVNAQ--LSEFC---IGLTGITQDQVDRADAFP 205

Query: 188 DVIQQFEDWLVEHQIWRKDLGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLPDYFMEWI 247
            V+++  +W+   ++      G   +   +T G+WD+   +  QC +S +K P +  +WI
Sbjct: 206 QVLKKVIEWMKSKEL------GTKYKYCILTDGSWDMSKFLSIQCRLSRLKHPAFAKKWI 265

Query: 248 NIKDVYLNFYQ--KKATGMAMMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQI 307
           NI+  Y NFY+  +  T + +M+ +L +   G  H G+DD+KNI R+  RM+ DG  L+I
Sbjct: 266 NIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELRI 317

Query: 308 TAR 309
             +
Sbjct: 326 NEK 317

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BLAST of CmaCh09G008360 vs. Swiss-Prot
Match: ERI1_HUMAN (3'-5' exoribonuclease 1 OS=Homo sapiens GN=ERI1 PE=1 SV=3)

HSP 1 Score: 107.5 bits (267), Expect = 2.9e-22
Identity = 57/183 (31.15%), Postives = 102/183 (55.74%), Query Frame = 1


Query: 128 EIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYK 187
           EIIEFPV+L+N  TL++   F ++VRP   ++  ++++        G+ +   D A  + 
Sbjct: 150 EIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQ--LSDFC---ISLTGITQDQVDRADTFP 209

Query: 188 DVIQQFEDWLVEHQIWRKDLGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLPDYFMEWI 247
            V+++  DW+   ++      G   + + +T G+WD+   +  QC +S +K P +  +WI
Sbjct: 210 QVLKKVIDWMKLKEL------GTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWI 269

Query: 248 NIKDVYLNFYQ--KKATGMAMMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQI 307
           NI+  Y NFY+  +  T + +M+ +L +   G  H G+DD+KNI R+  RM+ DG  L+I
Sbjct: 270 NIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIARIAVRMLQDGCELRI 321

Query: 308 TAR 309
             +
Sbjct: 330 NEK 321

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BLAST of CmaCh09G008360 vs. Swiss-Prot
Match: ERI3_BOVIN (ERI1 exoribonuclease 3 OS=Bos taurus GN=ERI3 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.4e-21
Identity = 60/210 (28.57%), Postives = 107/210 (50.95%), Query Frame = 1


Query: 113 QDIEFFLVLDLEGKV--------EIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINE 172
           Q   +FLVLD E           EIIEFP++ +N +T+++   FH +V+P  +   ++  
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 200

Query: 173 YIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEHQIWRKDLGGVLD---RAAFVTCGN 232
           +     G   + +   D     + V+++ ++W+ +         G+LD   ++ FVTCG+
Sbjct: 201 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKE--------GLLDPNVKSIFVTCGD 260

Query: 233 WDIKTQVPHQCSVSNMKLPDYFMEWINIKDVY---LNFYQKKATGMAMMMRQLEIPLVGS 292
           WD+K  +P QC    + + DYF +WIN+K  Y   +  + K   G+  M + L +  +G 
Sbjct: 261 WDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPK--NGLLDMNKGLSLQHIGR 320

Query: 293 HHLGIDDTKNIVRVLQRMVADGAHLQITAR 309
            H GIDD KNI  +++ +   G   + T++
Sbjct: 321 PHSGIDDCKNIANIMKTLAYRGFIFKQTSK 335

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BLAST of CmaCh09G008360 vs. TrEMBL
Match: A0A0A0L4N2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G628930 PE=4 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 1.3e-167
Identity = 283/325 (87.08%), Postives = 301/325 (92.62%), Query Frame = 1


Query: 1   MFVRAPLLKVSSFYSIPCHSLVPLSLSSAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 60
           MF+RA LLK SSFYSIPCH L+P+SLSS+ICSSPRTP +IRCHS+ P +HEPSSSA SE 
Sbjct: 1   MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEF 60

Query: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120
            DV  NRWRP CLY+T  +CTMMDDPLHIKKFNHDISRELQVDVA S HMRTQD ++FLV
Sbjct: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYKDVIQQFEDWLVEHQIWRKDLGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLP 240
           DTAILYKDVIQQFEDWLV+HQ+WRK+LGGVLDRAAFVTCGNWDIKTQVPHQCSVS MKLP
Sbjct: 181 DTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLP 240

Query: 241 DYFMEWINIKDVYLNFYQKKATGMAMMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 300
           DYFMEWINIKDVYLNFY KKATGMA MMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV DG
Sbjct: 241 DYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG 300

Query: 301 AHLQITARRNPNSPQHVKFHFENRI 326
           AHLQ+TARRNP SPQHVKF FENRI
Sbjct: 301 AHLQVTARRNPKSPQHVKFLFENRI 325

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BLAST of CmaCh09G008360 vs. TrEMBL
Match: A0A0G4ALS3_9ROSI (Polynucleotidyl transferase ribonuclease H-like superfamily protein (Fragment) OS=Hypseocharis bilobata PE=2 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 4.8e-117
Identity = 205/312 (65.71%), Postives = 253/312 (81.09%), Query Frame = 1


Query: 14  YSIPCHSLVPLSLSSAICSSPRTPLAIRCHSSLPTAHEPSSSAPSESLDVVHNRWRPMCL 73
           YS+   SL PL+LS     SP   L +   +SL TA    SS PS   +   NRW+PMCL
Sbjct: 8   YSLCFGSLSPLTLSV----SPVRTLTVS--ASLSTAQHHPSSTPSPDHNTGGNRWKPMCL 67

Query: 74  YYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFP 133
           YYT   CT +DDP+H++KFNH+ S EL++++A  KH R+Q++++FLVLDLEGKVEI+EFP
Sbjct: 68  YYTHGMCTKLDDPVHVEKFNHNFSEELRLNIAEFKHKRSQELDYFLVLDLEGKVEILEFP 127

Query: 134 VILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQF 193
           V+LVNAKTLDV   FHRFVRPS+MSE+RINEYIEGKYGK GVDRVWHDTAI +++VIQQF
Sbjct: 128 VVLVNAKTLDVVNLFHRFVRPSKMSEQRINEYIEGKYGKLGVDRVWHDTAIPFEEVIQQF 187

Query: 194 EDWLVEHQIWRKDLGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLPDYFMEWINIKDVY 253
           E WL + ++W K+ GG LDRAAFVTCGNWDIKT+VP QC+VS MKLP YFMEWIN+KDVY
Sbjct: 188 EAWLAQCRLWEKEQGGHLDRAAFVTCGNWDIKTKVPQQCTVSKMKLPSYFMEWINLKDVY 247

Query: 254 LNFYQKKATGMAMMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITARRNPNS 313
           LNFY+++ATGM  MMR+L+IP +GSHHLGIDD KNI RVLQRM+ADGA +QITARRN +S
Sbjct: 248 LNFYKRRATGMMTMMRELQIPSLGSHHLGIDDAKNISRVLQRMIADGALIQITARRNFDS 307

Query: 314 PQHVKFHFENRI 326
           P++V+F F++RI
Sbjct: 308 PENVEFLFKDRI 313

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BLAST of CmaCh09G008360 vs. TrEMBL
Match: M5X1B1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008836mg PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 1.9e-113
Identity = 186/282 (65.96%), Postives = 236/282 (83.69%), Query Frame = 1


Query: 44  SSLPTAHEPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVD 103
           S+  T H+PS+ +    L      W+PMCLYYTQ KCTMM+DP H++KFNHD SR+LQV 
Sbjct: 35  SASQTHHDPSAPSVPSYLRKSSQPWKPMCLYYTQGKCTMMEDPTHLEKFNHDCSRDLQVT 94

Query: 104 VASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRIN 163
              S  + +Q++++FLVLDLEGK+EI+EFPV++++A T+DV  FFHRFVRPS MSE+RIN
Sbjct: 95  NYMSHRICSQNLDYFLVLDLEGKIEILEFPVLMIDANTMDVVDFFHRFVRPSEMSEKRIN 154

Query: 164 EYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEHQIWRKDLGGVLDRAAFVTCGNWD 223
           EYIEGKYGKFGVDRVWHDTAI +KDV+QQFE WL++HQ+W ++LGG L+RAAFVTCGNWD
Sbjct: 155 EYIEGKYGKFGVDRVWHDTAIPFKDVLQQFEAWLIQHQLWGEELGGCLNRAAFVTCGNWD 214

Query: 224 IKTQVPHQCSVSNMKLPDYFMEWINIKDVYLNFYQKKATGMAMMMRQLEIPLVGSHHLGI 283
           +KT+VP QC VS MKLP YFMEWIN+KDVYLNFY+++ATGM  MM++L +PL+GSHHLG 
Sbjct: 215 LKTKVPEQCKVSRMKLPSYFMEWINLKDVYLNFYKRRATGMMTMMKELHLPLLGSHHLGF 274

Query: 284 DDTKNIVRVLQRMVADGAHLQITARRNPNSPQHVKFHFENRI 326
           DD+KNI RV+Q M+ADGA ++ITARRNP+S + V+F F+NRI
Sbjct: 275 DDSKNIARVVQHMLADGALIEITARRNPDSLEKVEFLFKNRI 316

[Close]

BLAST of CmaCh09G008360 vs. TrEMBL
Match: A0A0G4AMZ3_9ROSI (Polynucleotidyl transferase ribonuclease H-like superfamily protein OS=Pelargonium australe PE=2 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 1.9e-113
Identity = 204/316 (64.56%), Postives = 252/316 (79.75%), Query Frame = 1


Query: 12  SFYSIPCHSLVPLSLSSAICS-SPRTPLAIRCHSSLPTAHEPSSSA-PSESLDVVHNRWR 71
           SF     +SL   SLSS   S SP   L++    S  T H+PSS+  PS   + +  RW+
Sbjct: 11  SFLPRAAYSLSFGSLSSITLSVSPFRTLSVSASLST-TQHDPSSTPIPSNKTNTI-GRWK 70

Query: 72  PMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFLVLDLEGKVEI 131
           PMCLYYT   CTM+DDP H++KFNH  S EL+VDVA  K+ R+Q+ ++FLVLDLEGKVEI
Sbjct: 71  PMCLYYTHGMCTMLDDPAHLEKFNHSCSEELRVDVAELKNKRSQEFDYFLVLDLEGKVEI 130

Query: 132 IEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDV 191
           +EFPV+LV+AKTL+V   FHRFVRPS+MSE+RINEYIEGKYG+ GVDRVWHDTAI ++ V
Sbjct: 131 LEFPVVLVDAKTLNVVDLFHRFVRPSKMSEQRINEYIEGKYGQLGVDRVWHDTAIPFEAV 190

Query: 192 IQQFEDWLVEHQIWRKDLGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLPDYFMEWINI 251
           +Q FEDWL +H++W K+ GG LDRAAFVTCGNWD+KT++P QC+VS MKLP YFMEWIN+
Sbjct: 191 LQNFEDWLAQHRLWGKEQGGHLDRAAFVTCGNWDVKTKIPQQCTVSKMKLPSYFMEWINL 250

Query: 252 KDVYLNFYQKKATGMAMMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITARR 311
           KDVYLNFY+++ATGM  MMR+L++PL+GSHHLGIDD KNI RVLQRM+ADGA +QITARR
Sbjct: 251 KDVYLNFYKRRATGMMTMMRELQLPLLGSHHLGIDDAKNITRVLQRMLADGALIQITARR 310

Query: 312 NPNSPQHVKFHFENRI 326
             +SP+ V+F FENRI
Sbjct: 311 --HSPEKVEFLFENRI 322

[Close]

BLAST of CmaCh09G008360 vs. TrEMBL
Match: A0A0G4AM62_9ROSI (Polynucleotidyl transferase ribonuclease H-like superfamily protein (Fragment) OS=Pelargonium echinatum PE=2 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 2.5e-113
Identity = 197/312 (63.14%), Postives = 249/312 (79.81%), Query Frame = 1


Query: 14  YSIPCHSLVPLSLSSAICSSPRTPLAIRCHSSLPTAHEPSSSAPSESLDVVHNRWRPMCL 73
           YS+   SL  ++LS      P   L++    S  T H+PSS+    +     +RW+PMCL
Sbjct: 2   YSLSFGSLSSITLSVL----PVRTLSVSASLST-TQHDPSSTPTPSNKTNTTSRWKPMCL 61

Query: 74  YYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFP 133
           YYT   CTM+DDP+H++KFNH  S EL+VDVA  K+ R+Q+ ++FLVLDLEGKVEI+EFP
Sbjct: 62  YYTHGMCTMLDDPVHLEKFNHSCSEELRVDVAELKNKRSQEFDYFLVLDLEGKVEILEFP 121

Query: 134 VILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQF 193
           V+LV+AKTL+V   FHRFVRPS+M+E+RINEYIEGKYG  GVDRVWHDTAI +++V+Q F
Sbjct: 122 VVLVDAKTLNVVDLFHRFVRPSKMTEQRINEYIEGKYGNLGVDRVWHDTAIPFEEVLQNF 181

Query: 194 EDWLVEHQIWRKDLGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLPDYFMEWINIKDVY 253
           EDWL EH++W K+ GG LDRAAFVTCGNWD+KT++P QC+VS MKLP YFMEWIN+KDVY
Sbjct: 182 EDWLTEHRLWGKEQGGHLDRAAFVTCGNWDVKTKIPQQCTVSKMKLPSYFMEWINLKDVY 241

Query: 254 LNFYQKKATGMAMMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITARRNPNS 313
           LNFY+++ATGM  MMR+L++PL+GSHHLGIDD KNI RVLQRM+ADGA +QITARR  +S
Sbjct: 242 LNFYKRRATGMMTMMRELQLPLLGSHHLGIDDAKNITRVLQRMLADGALIQITARR--HS 301

Query: 314 PQHVKFHFENRI 326
           P+ V+F +ENRI
Sbjct: 302 PEKVEFLYENRI 306

[Close]

BLAST of CmaCh09G008360 vs. TAIR10
Match: AT3G15140.1 (AT3G15140.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 374.4 bits (960), Expect = 7.1e-104
Identity = 182/329 (55.32%), Postives = 241/329 (73.25%), Query Frame = 1


Query: 4   RAPLLKVSSF----YSIPCHSLVPLSLSSAICSSPRTPLAIRCHSSLPTAHEPSSSAPS- 63
           R  L ++S F    +S P  +L        +C+S  +       S   ++   SSS+PS 
Sbjct: 9   RVSLSRISPFRDTRFSYPA-TLALAHTKRIMCNSSHSVSPSPSPSDFSSSSSSSSSSPST 68

Query: 64  -ESLDVVHN-RWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIE 123
              ++   N RWRPMCLYYT  KCT MDDP H++ FNHD S+EL+V  A  +  ++Q+  
Sbjct: 69  FSLMETSENARWRPMCLYYTHGKCTKMDDPAHLEIFNHDCSKELRVAAADLERKKSQEFN 128

Query: 124 FFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVD 183
           FFLV+DLEGKVEI+EFP+++V+AKT++V   FHRFVRP++MSE+ IN+YIEGKYG+ GVD
Sbjct: 129 FFLVIDLEGKVEILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAINKYIEGKYGELGVD 188

Query: 184 RVWHDTAILYKDVIQQFEDWLVEHQIWRKDLGGVLDRAAFVTCGNWDIKTQVPHQCSVSN 243
           RVWHDTAI +K V+++FE WL EH +W KD    L+ AAFVTCGNWDIKT++P QC VSN
Sbjct: 189 RVWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAFVTCGNWDIKTKIPEQCVVSN 248

Query: 244 MKLPDYFMEWINIKDVYLNFYQKKATGMAMMMRQLEIPLVGSHHLGIDDTKNIVRVLQRM 303
           + LP YFMEWIN+KDVYLNFY ++A GM  MMRQ  I L+GSHHLGIDDTKNI RV+QRM
Sbjct: 249 INLPPYFMEWINLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHLGIDDTKNITRVVQRM 308

Query: 304 VADGAHLQITARRNPNSPQHVKFHFENRI 326
           +++GA L++TARR+ ++ ++V+F F+NRI
Sbjct: 309 LSEGAVLKLTARRSKSNMRNVEFLFKNRI 336

[Close]

BLAST of CmaCh09G008360 vs. NCBI nr
Match: gi|449456609|ref|XP_004146041.1| (PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 [Cucumis sativus])

HSP 1 Score: 597.0 bits (1538), Expect = 1.9e-167
Identity = 283/325 (87.08%), Postives = 301/325 (92.62%), Query Frame = 1


Query: 1   MFVRAPLLKVSSFYSIPCHSLVPLSLSSAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 60
           MF+RA LLK SSFYSIPCH L+P+SLSS+ICSSPRTP +IRCHS+ P +HEPSSSA SE 
Sbjct: 1   MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEF 60

Query: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120
            DV  NRWRP CLY+T  +CTMMDDPLHIKKFNHDISRELQVDVA S HMRTQD ++FLV
Sbjct: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYKDVIQQFEDWLVEHQIWRKDLGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLP 240
           DTAILYKDVIQQFEDWLV+HQ+WRK+LGGVLDRAAFVTCGNWDIKTQVPHQCSVS MKLP
Sbjct: 181 DTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLP 240

Query: 241 DYFMEWINIKDVYLNFYQKKATGMAMMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 300
           DYFMEWINIKDVYLNFY KKATGMA MMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV DG
Sbjct: 241 DYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG 300

Query: 301 AHLQITARRNPNSPQHVKFHFENRI 326
           AHLQ+TARRNP SPQHVKF FENRI
Sbjct: 301 AHLQVTARRNPKSPQHVKFLFENRI 325

[Close]

BLAST of CmaCh09G008360 vs. NCBI nr
Match: gi|659127446|ref|XP_008463707.1| (PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 [Cucumis melo])

HSP 1 Score: 590.5 bits (1521), Expect = 1.8e-165
Identity = 280/325 (86.15%), Postives = 301/325 (92.62%), Query Frame = 1


Query: 1   MFVRAPLLKVSSFYSIPCHSLVPLSLSSAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 60
           MF+RA LLK+SSFYSIPCH L+P+SLSS+ICSSPRTP +IRCHS+LP +HEPSSSAPS+ 
Sbjct: 1   MFLRASLLKLSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSQF 60

Query: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120
            DV  NRWRP CLY+T  +CTMMDDPLHIKKFNHDISRELQVDVA S HMRTQD+++FLV
Sbjct: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYKDVIQQFEDWLVEHQIWRKDLGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLP 240
           DTAILY DVIQQFEDWLV+HQ+WRK+ GGVLDRAAFVTCGNWDIKTQVPHQC+VS MKLP
Sbjct: 181 DTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLP 240

Query: 241 DYFMEWINIKDVYLNFYQKKATGMAMMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 300
           DYFMEWINIKDVYLNFY KKATGMA MMRQLE+ LVGSHHLGIDDTKNIVRVLQRMV DG
Sbjct: 241 DYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDG 300

Query: 301 AHLQITARRNPNSPQHVKFHFENRI 326
           AHLQITARRNP SPQ VKF FENRI
Sbjct: 301 AHLQITARRNPKSPQQVKFLFENRI 325

[Close]

BLAST of CmaCh09G008360 vs. NCBI nr
Match: gi|778695817|ref|XP_011654056.1| (PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isoform X2 [Cucumis sativus])

HSP 1 Score: 475.7 bits (1223), Expect = 6.4e-131
Identity = 224/243 (92.18%), Postives = 233/243 (95.88%), Query Frame = 1


Query: 83  MDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTL 142
           MDDPLHIKKFNHDISRELQVDVA S HMRTQD ++FLVLDLEGKVEIIEFPVILVNAKT+
Sbjct: 1   MDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTM 60

Query: 143 DVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEHQI 202
            VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLV+HQ+
Sbjct: 61  GVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQHQL 120

Query: 203 WRKDLGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLPDYFMEWINIKDVYLNFYQKKAT 262
           WRK+LGGVLDRAAFVTCGNWDIKTQVPHQCSVS MKLPDYFMEWINIKDVYLNFY KKAT
Sbjct: 121 WRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYTKKAT 180

Query: 263 GMAMMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITARRNPNSPQHVKFHFE 322
           GMA MMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV DGAHLQ+TARRNP SPQHVKF FE
Sbjct: 181 GMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGAHLQVTARRNPKSPQHVKFLFE 240

Query: 323 NRI 326
           NRI
Sbjct: 241 NRI 243

[Close]

BLAST of CmaCh09G008360 vs. NCBI nr
Match: gi|659127448|ref|XP_008463708.1| (PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isoform X2 [Cucumis melo])

HSP 1 Score: 464.9 bits (1195), Expect = 1.1e-127
Identity = 220/243 (90.53%), Postives = 230/243 (94.65%), Query Frame = 1


Query: 83  MDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTL 142
           MDDPLHIKKFNHDISRELQVDVA S HMRTQD+++FLVLDLEGKVEIIEFPVILVNAKT+
Sbjct: 1   MDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTM 60

Query: 143 DVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEHQI 202
            VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWHDTAILY DVIQQFEDWLV+HQ+
Sbjct: 61  GVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWHDTAILYNDVIQQFEDWLVQHQL 120

Query: 203 WRKDLGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLPDYFMEWINIKDVYLNFYQKKAT 262
           WRK+ GGVLDRAAFVTCGNWDIKTQVPHQC+VS MKLPDYFMEWINIKDVYLNFY KKAT
Sbjct: 121 WRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKAT 180

Query: 263 GMAMMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITARRNPNSPQHVKFHFE 322
           GMA MMRQLE+ LVGSHHLGIDDTKNIVRVLQRMV DGAHLQITARRNP SPQ VKF FE
Sbjct: 181 GMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDGAHLQITARRNPKSPQQVKFLFE 240

Query: 323 NRI 326
           NRI
Sbjct: 241 NRI 243

[Close]

BLAST of CmaCh09G008360 vs. NCBI nr
Match: gi|225461547|ref|XP_002282697.1| (PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 [Vitis vinifera])

HSP 1 Score: 429.1 bits (1102), Expect = 6.9e-117
Identity = 203/319 (63.64%), Postives = 253/319 (79.31%), Query Frame = 1


Query: 9   KVSSFYSIPCHSLVPLSLSSAICSSPRTPLAIRCHSSLPTAHEPS--SSAPSESLDVVHN 68
           +VS F      SL+P   S +  S P     +    S P    PS  +++P  S     +
Sbjct: 5   RVSPFRYGSLSSLIPYVSSPSSLSPPVRTFTLSASISTPHPSPPSLLTASPKAS-----D 64

Query: 69  RWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFLVLDLEGK 128
           RWRPMCLYYTQ KCT MDDP H++ FNH+ SRELQV+ A+ +H+++Q ++FFLVLDLEGK
Sbjct: 65  RWRPMCLYYTQGKCTKMDDPTHLETFNHNCSRELQVNAANFQHLQSQHLDFFLVLDLEGK 124

Query: 129 VEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILY 188
           +EI+EFPV+++NAKT+DV   FHRFVRPS MSE+RINEYIEGKYGK GVDRVWHDT+I +
Sbjct: 125 IEILEFPVLMINAKTMDVVDLFHRFVRPSEMSEQRINEYIEGKYGKLGVDRVWHDTSIPF 184

Query: 189 KDVIQQFEDWLVEHQIWRKDLGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLPDYFMEW 248
           K+VIQQFE WL +H +W K++GG LD+AAFVTCGNWD+KT+VP QC VS MKLP YFMEW
Sbjct: 185 KEVIQQFEAWLTQHHLWTKEMGGRLDQAAFVTCGNWDLKTKVPQQCKVSKMKLPPYFMEW 244

Query: 249 INIKDVYLNFYQKKATGMAMMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQIT 308
           IN+KDVYLNFY+++ATGM  MM++L+IPL+GSHHLGIDDTKNI RVLQRM+ADGA LQIT
Sbjct: 245 INLKDVYLNFYKRRATGMMTMMKELQIPLLGSHHLGIDDTKNIARVLQRMLADGALLQIT 304

Query: 309 ARRNPNSPQHVKFHFENRI 326
           ARRN +SP++V+F F+NRI
Sbjct: 305 ARRNADSPENVEFLFKNRI 318

The following BLAST results are available for this feature:

BLAST of CmaCh09G008360 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y3514_ARATH	1.3e-102	55.32	Uncharacterized exonuclease domain-containing protein At3g15140 OS=Arabidopsis t...	[more]
ERI1_RAT	5.8e-23	31.69	3'-5' exoribonuclease 1 OS=Rattus norvegicus GN=Eri1 PE=2 SV=1	[more]
ERI1_MOUSE	1.3e-22	31.69	3'-5' exoribonuclease 1 OS=Mus musculus GN=Eri1 PE=1 SV=2	[more]
ERI1_HUMAN	2.9e-22	31.15	3'-5' exoribonuclease 1 OS=Homo sapiens GN=ERI1 PE=1 SV=3	[more]
ERI3_BOVIN	5.4e-21	28.57	ERI1 exoribonuclease 3 OS=Bos taurus GN=ERI3 PE=2 SV=1	[more]

BLAST of CmaCh09G008360 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4N2_CUCSA	1.3e-167	87.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G628930 PE=4 SV=1	[more]
A0A0G4ALS3_9ROSI	4.8e-117	65.71	Polynucleotidyl transferase ribonuclease H-like superfamily protein (Fragment) O...	[more]
M5X1B1_PRUPE	1.9e-113	65.96	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008836mg PE=4 SV=1	[more]
A0A0G4AMZ3_9ROSI	1.9e-113	64.56	Polynucleotidyl transferase ribonuclease H-like superfamily protein OS=Pelargoni...	[more]
A0A0G4AM62_9ROSI	2.5e-113	63.14	Polynucleotidyl transferase ribonuclease H-like superfamily protein (Fragment) O...	[more]

BLAST of CmaCh09G008360 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15140.1	7.1e-104	55.32	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

BLAST of CmaCh09G008360 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456609\|ref\|XP_004146041.1\|	1.9e-167	87.08	PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isofo...	[more]
gi\|659127446\|ref\|XP_008463707.1\|	1.8e-165	86.15	PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isofo...	[more]
gi\|778695817\|ref\|XP_011654056.1\|	6.4e-131	92.18	PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isofo...	[more]
gi\|659127448\|ref\|XP_008463708.1\|	1.1e-127	90.53	PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isofo...	[more]
gi\|225461547\|ref\|XP_002282697.1\|	6.9e-117	63.64	PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 [Viti...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf
IPR013520	Exonuclease_RNaseT/DNA_pol3

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
biological_process	GO:0008150	biological_process
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004527	exonuclease activity
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G008360.1	CmaCh09G008360.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012337	Ribonuclease H-like domain	GENE3D	G3DSA:3.30.420.10		coord: 111..307 score: 2.5
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 115..305 score: 1.04
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 114..293 score: 5.7
None	No IPR available	PANTHER	PTHR23044	3'-5' EXONUCLEASE ERI1-RELATED	coord: 64..321 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G008360	Cucsa.122830	Cucumber (Gy14) v1	cgycmaB0319
CmaCh09G008360	Cla023352	Watermelon (97103) v1	cmawmB037
CmaCh09G008360	Csa4G628930	Cucumber (Chinese Long) v2	cmacuB021
CmaCh09G008360	MELO3C025618	Melon (DHL92) v3.5.1	cmameB038
CmaCh09G008360	ClCG11G017740	Watermelon (Charleston Gray)	cmawcgB015
CmaCh09G008360	CSPI04G23140	Wild cucumber (PI 183967)	cmacpiB021
CmaCh09G008360	CmoCh09G008310	Cucurbita moschata (Rifu)	cmacmoB027
CmaCh09G008360	Lsi04G020400	Bottle gourd (USVL1VR-Ls)	cmalsiB023
CmaCh09G008360	Cp4.1LG06g06670	Cucurbita pepo (Zucchini)	cmacpeB060
CmaCh09G008360	MELO3C025618.2	Melon (DHL92) v3.6.1	cmamedB037
CmaCh09G008360	CsaV3_4G033360	Cucumber (Chinese Long) v3	cmacucB0028
CmaCh09G008360	Cla97C11G223770	Watermelon (97103) v2	cmawmbB020
CmaCh09G008360	Bhi09G002841	Wax gourd	cmawgoB0036
CmaCh09G008360	CsGy4G021530	Cucumber (Gy14) v2	cgybcmaB466
CmaCh09G008360	Carg17073	Silver-seed gourd	carcmaB0224

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G008360	Silver-seed gourd	carcmaB0434
CmaCh09G008360	Silver-seed gourd	carcmaB0932
CmaCh09G008360	Watermelon (97103) v2	cmawmbB021
CmaCh09G008360	Wax gourd	cmawgoB0038
CmaCh09G008360	Cucurbita maxima (Rimu)	cmacmaB038
CmaCh09G008360	Cucurbita maxima (Rimu)	cmacmaB045
CmaCh09G008360	Cucurbita maxima (Rimu)	cmacmaB052
CmaCh09G008360	Cucurbita moschata (Rifu)	cmacmoB048
CmaCh09G008360	Cucurbita moschata (Rifu)	cmacmoB041
CmaCh09G008360	Cucumber (Chinese Long) v2	cmacuB010
CmaCh09G008360	Melon (DHL92) v3.5.1	cmameB013
CmaCh09G008360	Watermelon (Charleston Gray)	cmawcgB016
CmaCh09G008360	Watermelon (97103) v1	cmawmB038
CmaCh09G008360	Cucurbita pepo (Zucchini)	cmacpeB046
CmaCh09G008360	Cucurbita pepo (Zucchini)	cmacpeB054
CmaCh09G008360	Bottle gourd (USVL1VR-Ls)	cmalsiB027