Cp4.1LG06g05690 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG06g05690
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDEAD-box ATP-dependent RNA helicase-like protein
LocationCp4.1LG06 : 3404222 .. 3408986 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTGTGCTTACAGACGACGATGAGTGCAGTTCTTCTACGGAGAACCACTGCCTTAGCGGCCTCCAGAGGTAGAGTTAGTTCCACTTTGTTATCCCCAATTGCCAACTTTTTAGCGTCTCGTGTGGGTGTTAATGGCAGCGTTATACCTGCTGCTGAGTTTGGTAATTTCTCCTGCATTGGGGTGATGGAGAGGCCTTCGGGTTTTGGTTTTCAATCGAGGGGATTTCATGCGGTTTCTCGGCCGTTGAATTTCAGGGCGTCGTTGGTTTCCCTGGCGGAGTTTGCGGTGGAGGAGTGTGTTGAGGTTAGTAGTAGTAGAAGCGGCGATGAAGGACTCGAGATTGGAAAGCTAGGGATCGCGCCGGAGATCGTCTCTGCTTTGGAGAAGAAGGGTATAACTAAGCTCTTTCCGATTCAGGTACAATGTTTCTCATGTTTTTAATATTTTATAGTTTCTACTGCTGGATGAGATTAGACAATATGGACAGAGTCGTGGGTTTTTAGAGTTGTTTACGACGAATTCGATCACTTCTTTGGACAACGACTTTGTTTTAATCCATGCATCTCACCCCAGCTTGGACGTTGAATTACTGCGATGAAGTTACGCATATTTTTGTTATGAACGAGTTTCATCTTTTATGAGAGCTAGAGGCCATGTTCAGTACTTCGTGACATGCTGGCTGTACGTGATACCTGTATTTCGGAATGCATTTGACATGTTTTGATTCAGTTTCTAATAGATCCGTTTGGTTATGTTTCGAAACTAGAGATTTTCATTTCCATTGAAGTTTGAGAATGTGCTGTTTTCTCTATCTTTTCAGAGGGCCGTGCTAGAACCAGCAATGCAAGGGCGTGACATGATTGGTCGTGCTAGAACTGGAACAGGAAAAACTCTTGCTTTTGGAATTCCCATCTTGGACAAAATCATTCAGTTCAATGCAAAGAAGGGGTTTGTCTTTTCATCTTGGTCAAATTTCTTTCAACTCGCTCTAGTTTCTACAGAATTTTTCATCTGGGAAGGGTTTGGATTGTTATTCTTTAAATTTTAGAATCCTAATTCGTTAGCAATTATGCAGAAAAGGAAGAAACCCGTTGGCCCTGGTTCTAGCTCCAACAAGGGAACTTGCTCGGCAGGTTGAAAAAGAATTTGAAGAGGCTGCTCCTAGCCTGGACATGATCTGTGTTTATGGGGGGACACCGATTTCAAGCCAAATGAGGCAGCTTGGCTATGGCGTTGATATCGCTGTTGGCACACCTGGTCGCTTGATTGATCTTCTTAATAGGGGTTCTCTAAATTTATCAGAAGTCAAGTTTGTTGTTCTTGATGAAGCAGACCAGATGCTTCAAGTAGGCTTTCAAGAGGATGTTGAGAAGATCTTGGAGAGGTTACCTCGGAAACGTCAGAGTATGATGTTCTCTGCAACAATGCCCTCTTGGATCAGAAAACTATCTCAAAATTACCTAACCAATCCGCTAACTGTTGATCTTGTGAGTATGTTGGCTATTTAATATATTTTCTACTTCTTGAATTTAACTTTATCACTGAAAAGCACAACCATTCAATTAGTAGACTCAGAAACTTAAGGTGGGTTGAACATGATTTTTTGAACCCATGAAGTTTCAGTTACATGAAATCTTCATTCAATTTCCTCATGAAGTTTCAGTTACACGATTCAAAGTTATAAAAATTCTTAAAATGCTTACAAACTTGATCGGTGTCTTCTTGAAGGCGATTATGAAAGAACTTTAGTAAGAAACACTGCCCTCAAAAGGTGTTGTGAACCCACTTTTAGCTTAGAACTCGTTGTATATTTCATTTTTCGTTTTACTCTCACGCTAGAGAAATACCTCAGGATGTAAAAAAAAAAAGCATTTTCTTCATAAAAAGGAAAAGAGCAATGTTCTTTTTCTCTGTTGTATGAGTGAATGTCTATCACAAGAATTTATTTGTTGCATTATGAATTCTGTGATTTATCTTCGGGGGCATTTCTTTCATATTCATGGGGTTTGAGGGGCTAACTTTTTAAACCAAAAAAAATGCAAAAAAAATATATGGAAAAGCTCATCACTATTTTATTGATATATGGGATTTGACAAAACTCATTAATATTTCAGGTTGGAGATTCTGATCAGAAATTGGCAGATGGAATTAGCTTATTCTCAATTGTTGCAGACATGCGCGGAAAAGCATCAATAATTGGACCTCTAATAGCAGTAAGGGACCCAGAACTTCTATTTGTTTGTTTTCTTATTTATTTATTTTTTTTTATTTCCTTTGATTCCCGCGAGTTAATATTTTACCAGGGCTGTTATTTCATATTGTTGACTGCTTGCTTTCATTATGCTGCTGCCAATTTTTTATTTGCTTATTAGGAACATGCTAAAGGCGGAAAGTGTATTGTTTTCACTCAAACAAAACGTGATGCCGATAGATTAGCCTATGCAATGGCAAGGAAATTTAAATGTGAAGCTTTGCATGGAGATATTTCACAGAGTCAGAGAGAAAGAACTCTTTCGGGTTTTAGAGCTGGACGTTTCAACGTTCTAGTTGCAACTGATGTTGCAGCAAGGGGTCTCGATATACCGAATGTTGATCTCGTAAGTGATAATGTTCCTCGATATTTCTTCCTCTTTCTTATGGTACATAGTTAGTTTCGGGATGCATGGTGAATCATTAAATTCTTTCTTCTCAATAGTTTTACCTTACTCCAATATTGAAAATAGACTAGATGTGCTGTTGTGCTTTTTTATGGTATCAGACCCTATCATCTCTTTCCCTCCTTTGCTGTTGGGACTCTCTCTTCCTCTTTGTGCTGTTAGGAGACTGGGAGGAACTGGTTTGCAGATTGAGGGCATATTTTGTTTGTATGTGGGCTAATCATTAAGATTTTTAGGATTTTGTCTGACTTCGATTTTTTCGTAGGTAATACATTTTGAGCTTCCAAACAACACAGAGATATTTGTCCATAGATCAGGTCGCACAGGTCGTGCTGGTAAGAAAGGCAGTGCTATTCTTATTCACACACAGAGTCAGTCAAGGGCTGTAAGAGTGATTGAGCGTGAAGTGGGATGCAGATTTAATGAGGTTCGGATTTCGCTTTACCGTAAAAAATTTGCAACTTGGGATTCTTTTAAGTACATAACTAGAACTTTATCTATGTTTCTGTATTTTTACTCATGAGAAAAGTAATATTAATGTCTGAAGTGAAGGTAAGGTGAAGGCTTAAAAACATTTCTAATTTGCTTGCAGTAAGTTTCTGGCTCCCGTAACAGCCTCCAAATAGATACCGACATTTTTTTAGTACAACATGTGGGGACGGTGGCCTGGTACATTCATTTTTTAGAAGTAGAGGATTCATATTTCACGCCTATCTCATATATGAAAGAATGCCTATCACATATTTGTTTCTAATCTGACATTATAAGCCAACATGAGCATATCTCAACCATATTTGACATGTACTCCTTCCCTTAAGGTTGGAGGTTCAAATCCCCATACTTTATTTGTTGTACTAAAATAAATCACACATGATAAGCAAACAACTCCCGGTGACAACCATATCGATTCTTTACTAAAGGGTGGATTTCCTTTCACATTTGGGGTTGCTGAAGACTTTAAATCATCAACTCATGCATAGGAATGTGGTGGGAATGCAGATGTTTTTTCTTTTCAAACGTCCTCTGAAGATATAGAGGCATCTGTCCTATAATCTGCGTAGTTGAGTAAATCCAAGCATACCAATCACCATATGGGTGATATATAATTAGATAATTGACTTCTCTAGTAGCTCCCCATCTCAGGAATTTAGCAATAAATGTTGATCCATGTTGGAGTATCTTACTACATGATGTAAAGTTGACTCTATTCACTCTGTTTTTTTAATTTATTATCAGCTTCCAAGGATTACTGTTGAGGATGGTGCTCATGTGGATATGTTCAGTGAAAGGGGTGTCGGTGGTCGATTTAGCTCTTCTGGAGGATTTCGGGATCCTCGAACAAATGATTCAGGTCGAACTGGCAGCCAGAGAGGTCCAAGTTTCAGGCGTTCAGGAGATTATGATAATTCCAGTTTTGGCCGTTCAAGTGGTAGGGATTCTTTTGGGGCAAAGGGTAGAAACGGTGGACATACCTCTGGTGGTTTCAGTTCATTTGGTGCTCGTAAGTCCAACAATGCAGGAGATTTTCGTAGTTCTGGGTCTCGACGTTCTGGTGGGTTTGGAGACTTTGATTTTGATTCAGGTCGTAGTTCGGGAAGGAAGTCTAGAAACTCTGGCTTATTTGGTGACGACGATATGGAAGCAAATCAGAGCAGTAGGAGAAGGAAATTTTAAACTAGGTTGGTGAGGGATGTTCTTTATCAGCAATTCGAAATTCCTAACTGCTGGCTTCCAGTTCTTCAACCACAAGAGGGCGACAACCATGTTCGACGTTAAGGTAGAGGTTCTACTTCAAAAGTTCAGTTCAGATTTTCCTTTTGGAGGTTGGCTGAGACTTCAAAATCACATGGATTTGCATTTTTGCAGGAGGCAGCATCATGGGGAATTATAATTGCGTTGGAGAGTTCACGAATTTTTGAGGTAGGTTCATGTTCATGTGCAAAAAATGGCACATTTCTTGTATTTTTGCAGTTGATACGAATGTTATTAGCACTCTGAAGGGAAATTAGGCTCAATATTAGGGATCATCATCTTGTAATATGGTCTGGTGCATAAATCCTTTTTGACATATTAATACCATTATTTTGCCGTATTACTTTGAT

mRNA sequence

ATGGATTTGTGCTTACAGACGACGATGAGTGCAGTTCTTCTACGGAGAACCACTGCCTTAGCGGCCTCCAGAGGTAGAGTTAGTTCCACTTTGTTATCCCCAATTGCCAACTTTTTAGCGTCTCGTGTGGGTGTTAATGGCAGCGTTATACCTGCTGCTGAGTTTGGTAATTTCTCCTGCATTGGGGTGATGGAGAGGCCTTCGGGTTTTGGTTTTCAATCGAGGGGATTTCATGCGGTTTCTCGGCCGTTGAATTTCAGGGCGTCGTTGGTTTCCCTGGCGGAGTTTGCGGTGGAGGAGTGTGTTGAGGTTAGTAGTAGTAGAAGCGGCGATGAAGGACTCGAGATTGGAAAGCTAGGGATCGCGCCGGAGATCGTCTCTGCTTTGGAGAAGAAGGGTATAACTAAGCTCTTTCCGATTCAGAGGGCCGTGCTAGAACCAGCAATGCAAGGGCGTGACATGATTGGTCGTGCTAGAACTGGAACAGGAAAAACTCTTGCTTTTGGAATTCCCATCTTGGACAAAATCATTCAGTTCAATGCAAAGAAGGGAAAAGGAAGAAACCCGTTGGCCCTGGTTCTAGCTCCAACAAGGGAACTTGCTCGGCAGGTTGAAAAAGAATTTGAAGAGGCTGCTCCTAGCCTGGACATGATCTGTGTTTATGGGGGGACACCGATTTCAAGCCAAATGAGGCAGCTTGGCTATGGCGTTGATATCGCTGTTGGCACACCTGGTCGCTTGATTGATCTTCTTAATAGGGGTTCTCTAAATTTATCAGAAGTCAAGTTTGTTGTTCTTGATGAAGCAGACCAGATGCTTCAAGTAGGCTTTCAAGAGGATGTTGAGAAGATCTTGGAGAGGTTACCTCGGAAACGTCAGAGTATGATGTTCTCTGCAACAATGCCCTCTTGGATCAGAAAACTATCTCAAAATTACCTAACCAATCCGCTAACTGTTGATCTTGTTGGAGATTCTGATCAGAAATTGGCAGATGGAATTAGCTTATTCTCAATTGTTGCAGACATGCGCGGAAAAGCATCAATAATTGGACCTCTAATAGCAGAACATGCTAAAGGCGGAAAGTGTATTGTTTTCACTCAAACAAAACGTGATGCCGATAGATTAGCCTATGCAATGGCAAGGAAATTTAAATGTGAAGCTTTGCATGGAGATATTTCACAGAGTCAGAGAGAAAGAACTCTTTCGGGTTTTAGAGCTGGACGTTTCAACGTTCTAGTTGCAACTGATGTTGCAGCAAGGGGTCTCGATATACCGAATGTTGATCTCGTAATACATTTTGAGCTTCCAAACAACACAGAGATATTTGTCCATAGATCAGGTCGCACAGGTCGTGCTGGTAAGAAAGGCAGTGCTATTCTTATTCACACACAGAGTCAGTCAAGGGCTGTAAGAGTGATTGAGCGTGAAGTGGGATGCAGATTTAATGAGCTTCCAAGGATTACTGTTGAGGATGGTGCTCATGTGGATATGTTCAGTGAAAGGGGTGTCGGTGGTCGATTTAGCTCTTCTGGAGGATTTCGGGATCCTCGAACAAATGATTCAGGTCGAACTGGCAGCCAGAGAGGTCCAAGTTTCAGGCGTTCAGGAGATTATGATAATTCCAGTTTTGGCCGTTCAAGTGGTAGGGATTCTTTTGGGGCAAAGGGTAGAAACGGTGGACATACCTCTGGTGGTTTCAGTTCATTTGGTGCTCGTAAGTCCAACAATGCAGGAGATTTTCGTAGTTCTGGGTCTCGACGTTCTGGTGGGTTTGGAGACTTTGATTTTGATTCAGGTCGTAGTTCGGGAAGGAAGTCTAGAAACTCTGGCTTATTTGGTGACGACGATATGGAAGCAAATCAGAGCAGTAGGAGAAGGAAATTTTAAACTAGGTTGGTGAGGGATGTTCTTTATCAGCAATTCGAAATTCCTAACTGCTGGCTTCCAGTTCTTCAACCACAAGAGGGCGACAACCATGTTCGACGTTAAGGAGGCAGCATCATGGGGAATTATAATTGCGTTGGAGAGTTCACGAATTTTTGAGGTAGGTTCATGTTCATGTGCAAAAAATGGCACATTTCTTGTATTTTTGCAGTTGATACGAATGTTATTAGCACTCTGAAGGGAAATTAGGCTCAATATTAGGGATCATCATCTTGTAATATGGTCTGGTGCATAAATCCTTTTTGACATATTAATACCATTATTTTGCCGTATTACTTTGAT

Coding sequence (CDS)

ATGGATTTGTGCTTACAGACGACGATGAGTGCAGTTCTTCTACGGAGAACCACTGCCTTAGCGGCCTCCAGAGGTAGAGTTAGTTCCACTTTGTTATCCCCAATTGCCAACTTTTTAGCGTCTCGTGTGGGTGTTAATGGCAGCGTTATACCTGCTGCTGAGTTTGGTAATTTCTCCTGCATTGGGGTGATGGAGAGGCCTTCGGGTTTTGGTTTTCAATCGAGGGGATTTCATGCGGTTTCTCGGCCGTTGAATTTCAGGGCGTCGTTGGTTTCCCTGGCGGAGTTTGCGGTGGAGGAGTGTGTTGAGGTTAGTAGTAGTAGAAGCGGCGATGAAGGACTCGAGATTGGAAAGCTAGGGATCGCGCCGGAGATCGTCTCTGCTTTGGAGAAGAAGGGTATAACTAAGCTCTTTCCGATTCAGAGGGCCGTGCTAGAACCAGCAATGCAAGGGCGTGACATGATTGGTCGTGCTAGAACTGGAACAGGAAAAACTCTTGCTTTTGGAATTCCCATCTTGGACAAAATCATTCAGTTCAATGCAAAGAAGGGAAAAGGAAGAAACCCGTTGGCCCTGGTTCTAGCTCCAACAAGGGAACTTGCTCGGCAGGTTGAAAAAGAATTTGAAGAGGCTGCTCCTAGCCTGGACATGATCTGTGTTTATGGGGGGACACCGATTTCAAGCCAAATGAGGCAGCTTGGCTATGGCGTTGATATCGCTGTTGGCACACCTGGTCGCTTGATTGATCTTCTTAATAGGGGTTCTCTAAATTTATCAGAAGTCAAGTTTGTTGTTCTTGATGAAGCAGACCAGATGCTTCAAGTAGGCTTTCAAGAGGATGTTGAGAAGATCTTGGAGAGGTTACCTCGGAAACGTCAGAGTATGATGTTCTCTGCAACAATGCCCTCTTGGATCAGAAAACTATCTCAAAATTACCTAACCAATCCGCTAACTGTTGATCTTGTTGGAGATTCTGATCAGAAATTGGCAGATGGAATTAGCTTATTCTCAATTGTTGCAGACATGCGCGGAAAAGCATCAATAATTGGACCTCTAATAGCAGAACATGCTAAAGGCGGAAAGTGTATTGTTTTCACTCAAACAAAACGTGATGCCGATAGATTAGCCTATGCAATGGCAAGGAAATTTAAATGTGAAGCTTTGCATGGAGATATTTCACAGAGTCAGAGAGAAAGAACTCTTTCGGGTTTTAGAGCTGGACGTTTCAACGTTCTAGTTGCAACTGATGTTGCAGCAAGGGGTCTCGATATACCGAATGTTGATCTCGTAATACATTTTGAGCTTCCAAACAACACAGAGATATTTGTCCATAGATCAGGTCGCACAGGTCGTGCTGGTAAGAAAGGCAGTGCTATTCTTATTCACACACAGAGTCAGTCAAGGGCTGTAAGAGTGATTGAGCGTGAAGTGGGATGCAGATTTAATGAGCTTCCAAGGATTACTGTTGAGGATGGTGCTCATGTGGATATGTTCAGTGAAAGGGGTGTCGGTGGTCGATTTAGCTCTTCTGGAGGATTTCGGGATCCTCGAACAAATGATTCAGGTCGAACTGGCAGCCAGAGAGGTCCAAGTTTCAGGCGTTCAGGAGATTATGATAATTCCAGTTTTGGCCGTTCAAGTGGTAGGGATTCTTTTGGGGCAAAGGGTAGAAACGGTGGACATACCTCTGGTGGTTTCAGTTCATTTGGTGCTCGTAAGTCCAACAATGCAGGAGATTTTCGTAGTTCTGGGTCTCGACGTTCTGGTGGGTTTGGAGACTTTGATTTTGATTCAGGTCGTAGTTCGGGAAGGAAGTCTAGAAACTCTGGCTTATTTGGTGACGACGATATGGAAGCAAATCAGAGCAGTAGGAGAAGGAAATTTTAA

Protein sequence

MDLCLQTTMSAVLLRRTTALAASRGRVSSTLLSPIANFLASRVGVNGSVIPAAEFGNFSCIGVMERPSGFGFQSRGFHAVSRPLNFRASLVSLAEFAVEECVEVSSSRSGDEGLEIGKLGIAPEIVSALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKKGKGRNPLALVLAPTRELARQVEKEFEEAAPSLDMICVYGGTPISSQMRQLGYGVDIAVGTPGRLIDLLNRGSLNLSEVKFVVLDEADQMLQVGFQEDVEKILERLPRKRQSMMFSATMPSWIRKLSQNYLTNPLTVDLVGDSDQKLADGISLFSIVADMRGKASIIGPLIAEHAKGGKCIVFTQTKRDADRLAYAMARKFKCEALHGDISQSQRERTLSGFRAGRFNVLVATDVAARGLDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIHTQSQSRAVRVIEREVGCRFNELPRITVEDGAHVDMFSERGVGGRFSSSGGFRDPRTNDSGRTGSQRGPSFRRSGDYDNSSFGRSSGRDSFGAKGRNGGHTSGGFSSFGARKSNNAGDFRSSGSRRSGGFGDFDFDSGRSSGRKSRNSGLFGDDDMEANQSSRRRKF
BLAST of Cp4.1LG06g05690 vs. Swiss-Prot
Match: RH53_ARATH (DEAD-box ATP-dependent RNA helicase 53 OS=Arabidopsis thaliana GN=RH53 PE=2 SV=1)

HSP 1 Score: 687.6 bits (1773), Expect = 1.3e-196
Identity = 399/629 (63.43%), Postives = 463/629 (73.61%), Query Frame = 1

Query: 9   MSAVLLRRTTALAASRGRVSSTLLSPIANFLASRVGVNGSVIPAAEFGNFSCIGVMERPS 68
           M   +LRR+  L AS+  +S++L S       + V  +     A    + + IG  +  +
Sbjct: 1   MITTVLRRSL-LDASKRNLSASLTS------INTVLFHNLAPAATRVSDLALIGSSDVKA 60

Query: 69  GF--GFQSRGFHAVSRPLNFRASLVSLAEFAVEECVE--VSSSRS-GDEGLEIGKLGIAP 128
           GF  G +++G H  S PL+FRAS+VS A FA+ E  E  V  S S G +GL I +LGI+P
Sbjct: 61  GFPFGVEAKGIHFQSGPLDFRASMVSQAGFAISESSERRVGDSESVGGDGLAISELGISP 120

Query: 129 EIVSALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKK 188
           EIV AL  KGI KLFPIQ+AVLEPAM+GRDMIGRARTGTGKTLAFGIPI+DKII++NAK 
Sbjct: 121 EIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYNAKH 180

Query: 189 GKGRNPLALVLAPTRELARQVEKEFEEAAPSLDMICVYGGTPISSQMRQLGYGVDIAVGT 248
           G+GRNPL LVLAPTRELARQVEKEF E+APSLD IC+YGGTPI  QMRQL YGVD+AVGT
Sbjct: 181 GRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRQLDYGVDVAVGT 240

Query: 249 PGRLIDLLNRGSLNLSEVKFVVLDEADQMLQVGFQEDVEKILERLPRKRQSMMFSATMPS 308
           PGR+IDL+ RG+LNLSEV+FVVLDEADQMLQVGF EDVE ILE+LP KRQSMMFSATMPS
Sbjct: 241 PGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSMMFSATMPS 300

Query: 309 WIRKLSQNYLTNPLTVDLVGDSDQKLADGISLFSIVADMRGKASIIGPLIAEHAKGGKCI 368
           WIR L++ YL NPLTVDLVGDSDQKLADGI+ +SI+AD  G+ASIIGPL+ EHAKGGKCI
Sbjct: 301 WIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASIIGPLVTEHAKGGKCI 360

Query: 369 VFTQTKRDADRLAYAMARKFKCEALHGDISQSQRERTLSGFRAGRFNVLVATDVAARGLD 428
           VFTQTKRDADRL+YA+AR FKCEALHGDISQSQRERTL+GFR G FN+LVATDVAARGLD
Sbjct: 361 VFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAARGLD 420

Query: 429 IPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIHTQSQSRAVRVIEREVGCRFNE 488
           +PNVDL+IH+ELPNNTE FVHR+GRTGRAGKKGSAILI++Q QSRAV++IEREVG RF E
Sbjct: 421 VPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAVKIIEREVGSRFTE 480

Query: 489 LPRITVEDGAHVDMFSERGVGGRFSSS--GGFRDPRTNDSGRTGS--------------Q 548
           LP I VE G+   MF   G+G R   S  GG RD  ++  GR+G                
Sbjct: 481 LPSIAVERGS-ASMFE--GIGSRSGGSFGGGMRDRGSSFGGRSGGGGYGGSSGGYGGGRS 540

Query: 549 RGPSFRRSGDYDNSSFGRSSGRDSFGAKGRNGGHTSGGFSSFGARKSNNAGDFRSSGSRR 608
            G S R SGD D S FG S G  S    G +    SGG SSFG  +S        S + R
Sbjct: 541 GGSSNRYSGDSDRSGFG-SFGMRSPEGYGSDRSSQSGGRSSFGGGRSG------GSSNNR 600

Query: 609 SGGFGDFDFDSGRSSGRKSRNSGLFGDDD 617
           S GFGDF  D    SG +S   G FG +D
Sbjct: 601 SSGFGDFGSDRSSQSGGRSSFGG-FGSND 611

BLAST of Cp4.1LG06g05690 vs. Swiss-Prot
Match: RH9_ARATH (DEAD-box ATP-dependent RNA helicase 9 OS=Arabidopsis thaliana GN=RH9 PE=2 SV=1)

HSP 1 Score: 653.7 bits (1685), Expect = 2.1e-186
Identity = 379/620 (61.13%), Postives = 447/620 (72.10%), Query Frame = 1

Query: 9   MSAVLLRRTTALAASRGRVSSTLLSPIANFLASRVGVNGSVIPAAEFGNFSCIGVMERPS 68
           M + +LRR+  L  SR  +++++ S  A    +      +V   A  G  +   +    S
Sbjct: 1   MISTVLRRSI-LGTSRRTLAASVTSINAALFHNLAPAAATVSDLAN-GATNVKSLPSNSS 60

Query: 69  GFGFQSRGFHAVSRPLNFRASLVSLAEFAVEECV------------EVSSSRSGDEGLEI 128
            FG + R FH  S P  FR+S+VS A FA +E              E   S  G +GL I
Sbjct: 61  PFGVKVRDFHVKSVPSEFRSSIVSSAGFAAQEYAPSYENDGGIGDSESVGSSGGGDGLAI 120

Query: 129 GKLGIAPEIVSALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 188
             LGI+PEIV AL+ +GI KLFPIQ+AVLEPAM+GRDMIGRARTGTGKTLAFGIPI+DKI
Sbjct: 121 ADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKI 180

Query: 189 IQFNAKKGKGRNPLALVLAPTRELARQVEKEFEEAAPSLDMICVYGGTPISSQMRQLGYG 248
           I+FNAK G+G+NP  LVLAPTRELARQVEKEF E+APSLD IC+YGGTPI  QMR+L YG
Sbjct: 181 IKFNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRELNYG 240

Query: 249 VDIAVGTPGRLIDLLNRGSLNLSEVKFVVLDEADQMLQVGFQEDVEKILERLPRKRQSMM 308
           +D+AVGTPGR+IDL+ RG+LNLSEV+FVVLDEADQMLQVGF EDVE IL++LP KRQSMM
Sbjct: 241 IDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSMM 300

Query: 309 FSATMPSWIRKLSQNYLTNPLTVDLVGDSDQKLADGISLFSIVADMRGKASIIGPLIAEH 368
           FSATMPSWIR L++ YL NPLT+DLVGDSDQKLADGI+++SI AD  G+ASIIGPL+ EH
Sbjct: 301 FSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKEH 360

Query: 369 AKGGKCIVFTQTKRDADRLAYAMARKFKCEALHGDISQSQRERTLSGFRAGRFNVLVATD 428
            KGGKCIVFTQTKRDADRLA+ +A+ +KCEALHGDISQ+QRERTL+GFR G F++LVATD
Sbjct: 361 GKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVATD 420

Query: 429 VAARGLDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIHTQSQSRAVRVIERE 488
           VAARGLD+PNVDLVIH+ELPNNTE FVHR+GRTGRAGKKGSAILIH Q Q+RAV++IE+E
Sbjct: 421 VAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKE 480

Query: 489 VGCRFNELPRITVEDGAHVDMFSERGVGGRFSSSGGFRDPRTNDSGRTGSQRGPSFRRSG 548
           VG RFNELP I VE G+   MF   GVG R  S G F   R+   G      G S  RSG
Sbjct: 481 VGSRFNELPSIAVERGS-ASMF--EGVGAR--SGGSFGGGRSGGGGY--GSYGSSSGRSG 540

Query: 549 DYDNSSFGRSSGRDSFGAKGRNGGHTSGGFSSFGARKSNNAGDFRSSGSRRSGGFGDFDF 608
                 +G SSGR   G     G   S    S G+ +S+  G F S GS  SGGFG    
Sbjct: 541 GGSYGGYGGSSGRSGGGGGSYGGSGGSSSRYSGGSDRSSGFGSFGSGGS--SGGFG--SD 600

Query: 609 DSGRSSGRKSRNSGLFGDDD 617
            S +SSGR S   G FG +D
Sbjct: 601 RSSQSSGRSS--FGGFGSND 605

BLAST of Cp4.1LG06g05690 vs. Swiss-Prot
Match: RH53_ORYSJ (DEAD-box ATP-dependent RNA helicase 53 OS=Oryza sativa subsp. japonica GN=Os07g0143700 PE=2 SV=2)

HSP 1 Score: 610.1 bits (1572), Expect = 2.6e-173
Identity = 362/628 (57.64%), Postives = 439/628 (69.90%), Query Frame = 1

Query: 9   MSAVLLRRTTALAASRGR-VSSTLLSPIANFLASRVGVNGSVIPAAEFGNFSCIGVMERP 68
           +S  L   +++ AA RGR + + LLSP A+ L    G      PAA           E P
Sbjct: 5   LSRALCAASSSPAAPRGRSLLAALLSPSASPLDPCRG------PAAP----------EPP 64

Query: 69  SGFGFQSRGFHAVSRPLNFRASLVSLAEFAVEECVEVSSSRSGDEGLEIGKLGIAPEIVS 128
                + R FH    PL FR++  S +        E  ++  GD+GLE+ +LGI+P IV 
Sbjct: 65  -----RRRAFHGSPSPLGFRSTPASWSS------PEAGAAVGGDDGLEVARLGISPWIVE 124

Query: 129 ALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKKGKGR 188
            L  +GIT+LFPIQRAVL+PAMQG+DMIGRARTGTGKTLAFGIPI+D+I++ N K G GR
Sbjct: 125 RLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGR 184

Query: 189 NPLALVLAPTRELARQVEKEFEEAAPSLDMICVYGGTPISSQMRQLGYGVDIAVGTPGRL 248
           NPLA++LAPTRELARQVEKEF+E+AP LD +CVYGG PIS QMR L YGVD+ VGTPGR+
Sbjct: 185 NPLAIILAPTRELARQVEKEFKESAP-LDSLCVYGGVPISHQMRALNYGVDVVVGTPGRI 244

Query: 249 IDLLNRGSLNLSEVKFVVLDEADQMLQVGFQEDVEKILERLPRKRQSMMFSATMPSWIRK 308
           IDLL RG LNLSE++FVVLDEADQML VGF EDVE I+E LP+ RQSM+FSATMPSWIRK
Sbjct: 245 IDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSMLFSATMPSWIRK 304

Query: 309 LSQNYLTNPLTVDLVGDSDQKLADGISLFSIVADMRGKASIIGPLIAEHAKGGKCIVFTQ 368
           ++  YL +P+ +DLVGD DQKL +GISL+SI ++  GK SI+GPLI EHA GGKCIVFTQ
Sbjct: 305 ITSKYLKDPIIIDLVGDEDQKLPEGISLYSIASEHYGKPSILGPLIKEHANGGKCIVFTQ 364

Query: 369 TKRDADRLAYAMARKFKCEALHGDISQSQRERTLSGFRAGRFNVLVATDVAARGLDIPNV 428
           TKR+ADRLAYAM R + C+ALHGDISQ+QRERTLSGFR GRFN+LVATDVAARGLDIPNV
Sbjct: 365 TKREADRLAYAMGRSYACQALHGDISQNQRERTLSGFRDGRFNILVATDVAARGLDIPNV 424

Query: 429 DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIHTQSQSRAVRVIEREVGCRFNELPRI 488
           DLVIH+ELPN +E+FVHRSGRT RAGKKGSAILI+T  Q+RAVR+IE+++GC+F ELP+I
Sbjct: 425 DLVIHYELPNTSELFVHRSGRTARAGKKGSAILIYTNDQARAVRIIEQDIGCKFTELPKI 484

Query: 489 TVEDGAHVDMFSERGVGGRFSSSGGFRDPRTNDSG--RTGSQRGPSFRRSGDYDNSSFGR 548
            V D A  DMF+              RD R+  +G  RTG   G SF R G Y     GR
Sbjct: 485 EVADEAS-DMFNV------------VRDNRSRLAGSPRTG---GSSFGRGG-YGGFGEGR 544

Query: 549 SSG---RDSFGAKGRNGGHTSGGFSSFGA-----RKSNNAGDFRSSGSRRSGGFGDFDFD 608
           S G    D FG+    GG +    S +G+     R+ +NA  F  S S++  GFG  DF 
Sbjct: 545 SRGFGDFDGFGSSPNRGGRSRDAGSRYGSGFGDFRRPSNA--FGRSSSKQPDGFGFGDFG 583

Query: 609 SGRSSGRKSRNSGLFGDDDMEANQSSRR 626
            G  S   +R S  F  DD  + + SRR
Sbjct: 605 EGNFSRNGNRRSRSF--DDSGSTRYSRR 583

BLAST of Cp4.1LG06g05690 vs. Swiss-Prot
Match: RH9_ORYSJ (DEAD-box ATP-dependent RNA helicase 9 OS=Oryza sativa subsp. japonica GN=Os12g0611200 PE=2 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 1.8e-169
Identity = 330/557 (59.25%), Postives = 406/557 (72.89%), Query Frame = 1

Query: 77  FHAVSRPLNFR----ASLVSLAEFAVEECVEVSSSRSG-----------DEGLEIGKLGI 136
           FH+    L FR    A   +  ++A +E +     + G           +EGLE+ KLGI
Sbjct: 46  FHSSPAWLGFRETGAAGAAARPQYAADEGLFYEEDKRGAKAGGVAAGGAEEGLEVAKLGI 105

Query: 137 APEIVSALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNA 196
           +P+IVS L  +GITKLFPIQRAVLEPAMQG+DM+GRA+TGTGKTLAFGIPILD II+ N 
Sbjct: 106 SPKIVSQLASRGITKLFPIQRAVLEPAMQGKDMVGRAKTGTGKTLAFGIPILDAIIRHNE 165

Query: 197 KKGKGRNPLALVLAPTRELARQVEKEFEEAAPSLDMICVYGGTPISSQMRQLGYGVDIAV 256
           K   G+ PLA+VLAPTRELA+QVE+EF +++ +++ ICVYGGTPIS Q+RQL YGVD+ +
Sbjct: 166 KNSPGKFPLAIVLAPTRELAKQVEREFSDSS-NVETICVYGGTPISQQIRQLNYGVDVVI 225

Query: 257 GTPGRLIDLLNRGSLNLSEVKFVVLDEADQMLQVGFQEDVEKILERLPRKRQSMMFSATM 316
           GTPGR+IDLL RG+LNLSEV+FVVLDEADQML VGF EDVE IL+R+P KRQ++MFSATM
Sbjct: 226 GTPGRVIDLLKRGALNLSEVRFVVLDEADQMLSVGFDEDVETILDRVPPKRQTLMFSATM 285

Query: 317 PSWIRKLSQNYLTNPLTVDLVGDSDQKLADGISLFSIVADMRGKASIIGPLIAEHAKGGK 376
           P+WI++L+Q YL NP+T+DLVG+ DQKLA+GISL+SI ++   K +++G LI EHAKGGK
Sbjct: 286 PTWIQRLTQKYLKNPVTIDLVGEDDQKLAEGISLYSIASEGHAKPAVLGELIKEHAKGGK 345

Query: 377 CIVFTQTKRDADRLAYAMARKFKCEALHGDISQSQRERTLSGFRAGRFNVLVATDVAARG 436
           CIVFTQTKRDADRL+Y M R F+C+ALHGDI+Q+QRERTL GFR G FN+L+ATDVAARG
Sbjct: 346 CIVFTQTKRDADRLSYTMGRSFQCQALHGDITQAQRERTLKGFREGHFNILIATDVAARG 405

Query: 437 LDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIHTQSQSRAVRVIEREVGCRF 496
           LDIPNVDLVIHFELPN++E+FVHRSGRTGRAGKKG AI++H+  QSRA+R++E +VGC+F
Sbjct: 406 LDIPNVDLVIHFELPNSSELFVHRSGRTGRAGKKGKAIVMHSYQQSRAIRMVENDVGCKF 465

Query: 497 NELPRITVEDGAHVDMFSERGVGGRFSSSGGFRDPRTNDSGRTGSQRGPSFRRSGDYDNS 556
            ELP+I VE    +    +   GG F   GG         GR GS  G S  R G + +S
Sbjct: 466 TELPKINVEGSDLMSGGFDSFGGGGFGREGG------GSYGRRGS-FGSSSSRGGGFGDS 525

Query: 557 SFGRSSGRDSFGAKGRNGGHTSGGFSSFGARKSNNAGDFRSSGSRRS--GGFGDFDF-DS 615
            FGRS G       G  G  + GGF   G  +S   G F  SG  RS  GG+GD  F  S
Sbjct: 526 GFGRSGGGFGRSGGGGFGRSSGGGFGDSGFGRSGGGG-FGDSGFGRSGGGGYGDSGFGSS 585

BLAST of Cp4.1LG06g05690 vs. Swiss-Prot
Match: RH3_ORYSJ (DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0827700 PE=2 SV=2)

HSP 1 Score: 493.4 bits (1269), Expect = 3.6e-138
Identity = 247/396 (62.37%), Postives = 307/396 (77.53%), Query Frame = 1

Query: 99  EECVEVSSSRSGDEG-LEIGKLGIAPEIVSALEKKGITKLFPIQRAVLEPAMQGRDMIGR 158
           EE VE      GDE  L I +LG+  ++VS LEK+GIT LFPIQRAVL PA+ GRD+I R
Sbjct: 88  EEGVEAVGGGEGDEDELAIARLGLPEQLVSTLEKRGITHLFPIQRAVLIPALDGRDLIAR 147

Query: 159 ARTGTGKTLAFGIPILDKIIQFNAKKG--KGRNPLALVLAPTRELARQVEKEFEEAAPSL 218
           A+TGTGKTLAFGIP++ ++++ +  +   +GR P  LVLAPTRELA+QVEKE +E+AP L
Sbjct: 148 AKTGTGKTLAFGIPMIKQLMEEDDGRSVRRGRIPRVLVLAPTRELAKQVEKEIKESAPKL 207

Query: 219 DMICVYGGTPISSQMRQLGYGVDIAVGTPGRLIDLLNRGSLNLSEVKFVVLDEADQMLQV 278
             +CVYGG   + Q   L  GVD+ VGTPGR+IDL+N GSL L EVK++VLDEADQML V
Sbjct: 208 STVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAV 267

Query: 279 GFQEDVEKILERLPRKRQSMMFSATMPSWIRKLSQNYLTNPLTVDLVGDSDQKLADGISL 338
           GF+EDVE IL++LP +RQSM+FSATMP W++KLS+ YL NPLT+DLVGD D+KLA+GI L
Sbjct: 268 GFEEDVETILQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKL 327

Query: 339 FSIVADMRGKASIIGPLIAEHAKGGKCIVFTQTKRDADRLAYAMARKFKCEALHGDISQS 398
           ++I      K +++  LI  +AKGGK IVFT+TKRDAD ++ A+      EALHGDISQ 
Sbjct: 328 YAIPLTSTSKRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHGDISQH 387

Query: 399 QRERTLSGFRAGRFNVLVATDVAARGLDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKK 458
           QRERTL+GFR G+F VLVATDVAARGLDIPNVDL+IH+ELPN+ E FVHRSGRTGRAGK 
Sbjct: 388 QRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKA 447

Query: 459 GSAILIHTQSQSRAVRVIEREVGCRFNELPRITVED 492
           G+AIL+ T SQ R VR +ER+VGCRF+ +    +ED
Sbjct: 448 GTAILMFTNSQRRTVRSLERDVGCRFDFISPPAIED 483

BLAST of Cp4.1LG06g05690 vs. TrEMBL
Match: A0A0A0KZ67_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G616790 PE=4 SV=1)

HSP 1 Score: 881.3 bits (2276), Expect = 6.8e-253
Identity = 491/654 (75.08%), Postives = 537/654 (82.11%), Query Frame = 1

Query: 9   MSAVLLRRTTALAASRGRVSSTLLSPIANFLASRVGVNGSVIPAAEFGNFSCIGVMERPS 68
           MSA+LLRR++ALAAS GR++STL +PIANFL+S V VNG V+PAA+F +FS IGV E+  
Sbjct: 2   MSAILLRRSSALAASGGRINSTLFAPIANFLSSPVVVNGGVVPAADFQHFSTIGVTEKSL 61

Query: 69  GFGFQSRGFHAVSRPLNFRASLVSLAEFAVEECVEVSSSRSGDEGLEIGKLGIAPEIVSA 128
           GFGFQS+GFHA S PLNF+ASLVS AEFAVE+    SSS+SGDEGLEIGKLGIAPEIVSA
Sbjct: 62  GFGFQSKGFHAASGPLNFKASLVSKAEFAVEDYDCASSSKSGDEGLEIGKLGIAPEIVSA 121

Query: 129 LEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKKGKGRN 188
           L +KGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDK+IQFNAK G+GRN
Sbjct: 122 LARKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKLIQFNAKNGRGRN 181

Query: 189 PLALVLAPTRELARQVEKEFEEAAPSLDMICVYGGTPISSQMRQLGYGVDIAVGTPGRLI 248
           PLALVLAPTRELARQVEKEF+EAAPSLD ICVYGG PIS QMRQL YGVDIAVGTPGRLI
Sbjct: 182 PLALVLAPTRELARQVEKEFQEAAPSLDTICVYGGAPISQQMRQLDYGVDIAVGTPGRLI 241

Query: 249 DLLNRGSLNLSEVKFVVLDEADQMLQVGFQEDVEKILERLPRKRQSMMFSATMPSWIRKL 308
           DLLNRGSLNLSEV+FVVLDEADQMLQVGFQEDVEKILERLP+KRQSMMFSATMPSWI KL
Sbjct: 242 DLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQSMMFSATMPSWILKL 301

Query: 309 SQNYLTNPLTVDLVGDSDQKLADGISLFSIVADMRGKASIIGPLIAEHAKGGKCIVFTQT 368
           S+NYL NPLT+DLVGDSDQKLADGISLFS+V++  GKASIIGPLI EH KGGKCI+FTQT
Sbjct: 302 SRNYLNNPLTIDLVGDSDQKLADGISLFSVVSETYGKASIIGPLITEHGKGGKCIIFTQT 361

Query: 369 KRDADRLAYAMARKFKCEALHGDISQSQRERTLSGFRAGRFNVLVATDVAARGLDIPNVD 428
           KRDADRLAYAM R  +CEALHGDISQSQRERTLSGFR GRFNVLVATDVAARGLDIPNVD
Sbjct: 362 KRDADRLAYAMGRNLRCEALHGDISQSQRERTLSGFRDGRFNVLVATDVAARGLDIPNVD 421

Query: 429 LVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIHTQSQSRAVRVIEREVGCRFNELPRIT 488
           LVIHFELPNNTEIFVHRSGRTGRAGKKGS ILI++Q Q+RA+R+IEREVGCRFNELPRIT
Sbjct: 422 LVIHFELPNNTEIFVHRSGRTGRAGKKGSVILIYSQDQTRAIRMIEREVGCRFNELPRIT 481

Query: 489 VEDGAHVDMFSERGVGGRFSSSGGFRDPRTNDSGRTGSQRGPSFRRSGDYDNSSFGRSSG 548
           VE GAHVDMFS    GG F   GGF D + N+SGR G+ RG SF RSG Y++SSFGRS  
Sbjct: 482 VEAGAHVDMFS----GGSF--GGGFGDRQMNNSGRFGN-RGGSFGRSGGYESSSFGRSI- 541

Query: 549 RDSFGAKGRNGGHTSGGFSSFGARKSNNAG-----DFRSSGSR----------------- 608
                  GRN G +SG F SFG+R SN++G     DF  S  R                 
Sbjct: 542 -------GRNSGPSSGSFGSFGSRNSNSSGGFGRPDFGQSAGRFGDSGSSNRSGGFGNFG 601

Query: 609 -----RSGGFGDF-DFDSGRSSG----RKSRNSGLFG--DDDMEANQSSRRRKF 629
                RSGGFGDF    SGRS G      S  SG FG   D+++A Q + RRKF
Sbjct: 602 SSGSGRSGGFGDFGSSGSGRSGGFGDFGSSNRSGGFGGFGDNLDAKQGTGRRKF 640

BLAST of Cp4.1LG06g05690 vs. TrEMBL
Match: M5XBE5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002643mg PE=4 SV=1)

HSP 1 Score: 711.1 bits (1834), Expect = 1.2e-201
Identity = 409/616 (66.40%), Postives = 468/616 (75.97%), Query Frame = 1

Query: 9   MSAVLLRRTTALAASRGRVS-STLLSPIANFLASR-----VGVNGSVIPAAEFGNFSCIG 68
           M   +LRR+ ++A  R   +  TLL    +FLA+      +  NG++   A     S   
Sbjct: 1   MMTTILRRSPSIATVRSFAAIETLLFNHHSFLAASTPDLVLPANGALCGEARSYTVSAPK 60

Query: 69  VMERPSGFGFQSRGFHAVSRPLNFRASLVSLAEFAVEECVEVSSSRSG-DEGLEIGKLGI 128
               PS +GFQ R  HA S PLN+RAS    AEFAV+   + SS +SG D+GLEI KLGI
Sbjct: 61  PKLGPS-YGFQVRDLHAKSGPLNYRASTALSAEFAVDYSYDESSKKSGQDDGLEIAKLGI 120

Query: 129 APEIVSALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNA 188
           + +IVSAL KKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI+++NA
Sbjct: 121 SQDIVSALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKILKYNA 180

Query: 189 KKGKGRNPLALVLAPTRELARQVEKEFEEAAPSLDMICVYGGTPISSQMRQLGYGVDIAV 248
           K G+GRNPLALVLAPTRELA+QVEKEF E+AP LD ICVYGGTPISSQMRQL YGVD+AV
Sbjct: 181 KHGRGRNPLALVLAPTRELAKQVEKEFHESAPGLDTICVYGGTPISSQMRQLDYGVDVAV 240

Query: 249 GTPGRLIDLLNRGSLNLSEVKFVVLDEADQMLQVGFQEDVEKILERLPRKRQSMMFSATM 308
           GTPGR+IDL+NRG+LNLSEV+FVVLDEADQMLQVGFQE VE ILE+LP+KRQ++MFSATM
Sbjct: 241 GTPGRVIDLINRGALNLSEVQFVVLDEADQMLQVGFQEAVEIILEKLPKKRQTLMFSATM 300

Query: 309 PSWIRKLSQNYLTNPLTVDLVGDSDQKLADGISLFSIVADMRGKASIIGPLIAEHAKGGK 368
           P WI+KL+QNYL NP  +DLVG+SDQKLADGISLFSI +D  GKASIIGPLI  HAKGGK
Sbjct: 301 PGWIKKLTQNYLKNPEVIDLVGESDQKLADGISLFSISSDSYGKASIIGPLITAHAKGGK 360

Query: 369 CIVFTQTKRDADRLAYAMARKFKCEALHGDISQSQRERTLSGFRAGRFNVLVATDVAARG 428
           CIVFTQTKRDADRLAYAM+R +KCEALHGDI+Q+QRERTL+GFR G FN+LVATDVAARG
Sbjct: 361 CIVFTQTKRDADRLAYAMSRSYKCEALHGDINQTQRERTLAGFRDGNFNILVATDVAARG 420

Query: 429 LDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIHTQSQSRAVRVIEREVGCRF 488
           LD+PNVDLVIH+ELPNN+EIFVHRSGRTGRAGKKGSAIL++TQ QSRAVR IE++VGC+F
Sbjct: 421 LDVPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGSAILVYTQDQSRAVRTIEQDVGCKF 480

Query: 489 NELPRITVEDGAHVDMFSERGVGGRFSSSGGFRDPRTNDSGRTGSQRGPSFRRSGDYDNS 548
            ELPRI V DG  +DM  +    GRF++           S R G Q GP F R G     
Sbjct: 481 TELPRIAV-DGKSIDMMPDM---GRFNTK----------SSRFG-QAGPGFSRPG----- 540

Query: 549 SFGRSSG-RDSFGAKGRNGGHTSGGFSSFGARKSNNAGDFRSSGSRRSGGFGDFDFDSGR 608
            FGRSSG  DS G  GR+ G   G F SFG   + + G F  SGS R G FG   F  GR
Sbjct: 541 -FGRSSGYGDSSGQMGRSSGSRPGRFGSFG-DSAQSGGGFSGSGSNRGGNFGGSGF--GR 586

Query: 609 SSGRKSRNSGLFGDDD 617
           SSG     SG FG  D
Sbjct: 601 SSG-----SGGFGSSD 586

BLAST of Cp4.1LG06g05690 vs. TrEMBL
Match: A0A059A197_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01327 PE=4 SV=1)

HSP 1 Score: 710.7 bits (1833), Expect = 1.6e-201
Identity = 394/560 (70.36%), Postives = 441/560 (78.75%), Query Frame = 1

Query: 66  RPSGFGFQSRGFHAVSRPLNFRASLVSLAEFAVEECV-----EVSSSRSGDEGLEIGKLG 125
           +PS  G  +RGFHA   PL FRAS VS AEFAV++       + S+    DEGLEI KLG
Sbjct: 65  QPSWLGGSARGFHASPGPLGFRASGVSRAEFAVDDFAPYDEEKPSAGSRNDEGLEIAKLG 124

Query: 126 IAPEIVSALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFN 185
           IAPEIVSAL KKGI KLFPIQRAVLEPAMQGRDMI RA+TGTGKTLAFGIP++DKIIQFN
Sbjct: 125 IAPEIVSALAKKGIAKLFPIQRAVLEPAMQGRDMIARAKTGTGKTLAFGIPVMDKIIQFN 184

Query: 186 AKKGKGRNPLALVLAPTRELARQVEKEFEEAAPSLDMICVYGGTPISSQMRQLGYGVDIA 245
           AK G+GRNPLA++LAPTRELARQVEKEF E AP+LD ICVYGGTPI SQMRQL YGVD+ 
Sbjct: 185 AKHGRGRNPLAIILAPTRELARQVEKEFAETAPNLDTICVYGGTPIGSQMRQLDYGVDVV 244

Query: 246 VGTPGRLIDLLNRGSLNLSEVKFVVLDEADQMLQVGFQEDVEKILERLPRKRQSMMFSAT 305
           VGTPGR+IDLL RG+LNLSEV+FVVLDEADQML VGF+EDVE IL++LP+ RQSMMFSAT
Sbjct: 245 VGTPGRVIDLLKRGALNLSEVQFVVLDEADQMLAVGFEEDVETILQKLPQNRQSMMFSAT 304

Query: 306 MPSWIRKLSQNYLTNPLTVDLVGDSDQKLADGISLFSIVADMRGKASIIGPLIAEHAKGG 365
           MP+WIR L++ YL +PLT+DLVGDSDQKLA+GISL+SI +DM GKASIIGPLI EHAKGG
Sbjct: 305 MPNWIRSLTKKYLKDPLTIDLVGDSDQKLAEGISLYSIASDMYGKASIIGPLITEHAKGG 364

Query: 366 KCIVFTQTKRDADRLAYAMARKFKCEALHGDISQSQRERTLSGFRAGRFNVLVATDVAAR 425
           KCIVFTQTKRDADRLAYAM RKF+CEALHGDISQSQRERTL+GFR G+FN+LVATDVA+R
Sbjct: 365 KCIVFTQTKRDADRLAYAMGRKFRCEALHGDISQSQRERTLAGFRDGQFNILVATDVASR 424

Query: 426 GLDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIHTQSQSRAVRVIEREVGCR 485
           GLDIPNVDLVIHFELPNN+EIFVHRSGRTGRAGKKG+AILI+T+ Q+RAV+VIEREVGCR
Sbjct: 425 GLDIPNVDLVIHFELPNNSEIFVHRSGRTGRAGKKGNAILIYTREQTRAVKVIEREVGCR 484

Query: 486 FNELPRITVEDGAHVDMFSERGVGGRFSSSGGFRDPRTNDSGRTGSQRGPSFRRSGDYDN 545
           F ELP I VE G+ VDM ++ G GGR  S GG         GR+GS  G   RRSGD   
Sbjct: 485 FIELPSIAVEGGS-VDMSNDFGGGGRSGSYGG--------GGRSGSYGGGRERRSGD--- 544

Query: 546 SSFGRSSGRDSFGAKGRNGGHTSGGFSSFGARKSNNAG-----DFRSSGSRRSGGFGDFD 605
           S FGRS     FG  G +    SG F SFG   +  +G       RS    RS GFGD  
Sbjct: 545 SGFGRSQRGSDFGGYGSSS--NSGRFGSFGGPSTGPSGGGFGNSNRSGNFGRSSGFGDSS 604

Query: 606 FD-SGRSSGRKSRNSGLFGD 615
              SG   G  S  SG FGD
Sbjct: 605 STRSGGFGGNNSGRSGGFGD 610

BLAST of Cp4.1LG06g05690 vs. TrEMBL
Match: A0A0D2VV62_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G039900 PE=4 SV=1)

HSP 1 Score: 705.3 bits (1819), Expect = 6.7e-200
Identity = 401/613 (65.42%), Postives = 462/613 (75.37%), Query Frame = 1

Query: 9   MSAVLLRRTTALAASRGRVSSTLLSPIANFLASRVGVNGSVIPAAEFGNFSCIGVMERPS 68
           M   + +RTT+LA+ R      +L+  A  L        +V  AA       I   +   
Sbjct: 1   MMNTVFKRTTSLASRR------ILAASAQTLLHHFHSTATVAAAARDAETCFINRFKPFP 60

Query: 69  GF-GFQSRGFHAVSRPLNFRASLVSLAEFAVEECVEVSSSRSGDEGLEIGKLGIAPEIVS 128
           GF    ++GFHA S PL FRAS    AE+AVE+ VE      G E LEI  LGIAPEIVS
Sbjct: 61  GFPASAAKGFHAKSGPLYFRASTSLQAEYAVEDYVE----EKGSEALEISNLGIAPEIVS 120

Query: 129 ALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKKGKGR 188
           AL+ +GITKLFPIQRAVLEPAMQGRDMIGRA+TGTGKTLAFGIPI+DKII++NAK G+GR
Sbjct: 121 ALKNRGITKLFPIQRAVLEPAMQGRDMIGRAKTGTGKTLAFGIPIMDKIIRYNAKHGRGR 180

Query: 189 NPLALVLAPTRELARQVEKEFEEAAPSLDMICVYGGTPISSQMRQLGYGVDIAVGTPGRL 248
           NP+ LVLAPTRELA+QVEKEF E+AP+LD ICVYGGTPIS QMRQL YGVD+AVGTPGR+
Sbjct: 181 NPMCLVLAPTRELAKQVEKEFHESAPNLDTICVYGGTPISRQMRQLDYGVDVAVGTPGRI 240

Query: 249 IDLLNRGSLNLSEVKFVVLDEADQMLQVGFQEDVEKILERLPRKRQSMMFSATMPSWIRK 308
           IDLL RG+LNLSEV+F+VLDEADQMLQVGF EDVE ILERLP  RQSMMFSATMP+WIR 
Sbjct: 241 IDLLKRGALNLSEVQFLVLDEADQMLQVGFAEDVETILERLPANRQSMMFSATMPNWIRS 300

Query: 309 LSQNYLTNPLTVDLVGDSDQKLADGISLFSIVADMRGKASIIGPLIAEHAKGGKCIVFTQ 368
           L+Q +L NPLT+DLVG++DQKLA+GISL+SI ADMRGKA I+GPLI EHAKGGKCIVFTQ
Sbjct: 301 LTQKHLKNPLTIDLVGENDQKLAEGISLYSIAADMRGKAGILGPLITEHAKGGKCIVFTQ 360

Query: 369 TKRDADRLAYAMARKFKCEALHGDISQSQRERTLSGFRAGRFNVLVATDVAARGLDIPNV 428
           TKRDADRLAYAMAR FKCEALHGDISQSQRERTLSGFR G FN+LVATDVAARGLDIP+V
Sbjct: 361 TKRDADRLAYAMARNFKCEALHGDISQSQRERTLSGFRDGHFNILVATDVAARGLDIPSV 420

Query: 429 DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIHTQSQSRAVRVIEREVGCRFNELPRI 488
           DLVIH+ELPN +E FVHR+GRTGRAG+KGSAILI+TQ QSRAV+VIEREVGCRF+ELPRI
Sbjct: 421 DLVIHYELPNTSETFVHRTGRTGRAGRKGSAILIYTQDQSRAVKVIEREVGCRFSELPRI 480

Query: 489 TVEDGAHVDMFSERGVGGRFSSSGGFRDPRTNDS--GRTGSQRGPSFRRSGDYDNSSFGR 548
            V DG    MF++ G GGRF   GG RD    D   GR+G Q    F RSG    + FGR
Sbjct: 481 EV-DGGSTGMFNDIGAGGRF---GGPRDRGYGDMGFGRSGRQAEYGFGRSGGNRGTGFGR 540

Query: 549 SSGR---DSFGAKGRNGGHTSGGFSSFGARKSNNAGDFRSSGSRRSGGFGDFDFDS--GR 608
           S  +   +  G  GR G +   G  +FG   S+ +  F S GSRR+ GFGDF   +  G 
Sbjct: 541 SGSQFSDEMGGYGGRFGSNNRSG--NFGGSASSRSSGFGSFGSRRTSGFGDFGSGNPGGF 597

Query: 609 SSGRKSRNSGLFG 614
           +  R  + +G FG
Sbjct: 601 NDNRSGQTAGGFG 597

BLAST of Cp4.1LG06g05690 vs. TrEMBL
Match: A0A0B0N082_GOSAR (DEAD-box ATP-dependent RNA helicase 53-like protein OS=Gossypium arboreum GN=F383_29072 PE=4 SV=1)

HSP 1 Score: 700.7 bits (1807), Expect = 1.7e-198
Identity = 399/608 (65.62%), Postives = 457/608 (75.16%), Query Frame = 1

Query: 9   MSAVLLRRTTALAASRGRVSSTLLSPIANFLASRVGVNGSVIPAAEFGNFSCIGVMERPS 68
           M   + +RTT+LA+ R      +L+  A  L        +V  AA       I   +   
Sbjct: 1   MMNTVFKRTTSLASRR------ILAASAQTLLHHFHSTATVATAARDAETFFINRFKPFP 60

Query: 69  GF-GFQSRGFHAVSRPLNFRASLVSLAEFAVEECVEVSSSRSGDEGLEIGKLGIAPEIVS 128
           GF    ++GFHA S PL FRAS    AE+AVE+ V+      G E LEI  LGIAPEIVS
Sbjct: 61  GFPASAAKGFHAKSGPLYFRASTGVQAEYAVEDYVD----EKGSEALEISNLGIAPEIVS 120

Query: 129 ALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKKGKGR 188
           AL+ +GITKLFPIQRAVLEPAMQGRDMIGRA+TGTGKTLAFGIPI+DKII++NAK G+GR
Sbjct: 121 ALKNRGITKLFPIQRAVLEPAMQGRDMIGRAKTGTGKTLAFGIPIMDKIIRYNAKHGRGR 180

Query: 189 NPLALVLAPTRELARQVEKEFEEAAPSLDMICVYGGTPISSQMRQLGYGVDIAVGTPGRL 248
           NPL LVLAPTRELA+QVEKEF E+AP+LD ICVYGGTPIS QMRQL YGVD+AVGTPGR+
Sbjct: 181 NPLCLVLAPTRELAKQVEKEFHESAPNLDTICVYGGTPISRQMRQLDYGVDVAVGTPGRI 240

Query: 249 IDLLNRGSLNLSEVKFVVLDEADQMLQVGFQEDVEKILERLPRKRQSMMFSATMPSWIRK 308
           IDLL RG+LNLSEV+F+VLDEADQMLQVGF EDVE ILERLP  RQSMMFSATMP+WIR 
Sbjct: 241 IDLLKRGALNLSEVQFLVLDEADQMLQVGFAEDVETILERLPANRQSMMFSATMPNWIRS 300

Query: 309 LSQNYLTNPLTVDLVGDSDQKLADGISLFSIVADMRGKASIIGPLIAEHAKGGKCIVFTQ 368
           L+Q +L NPLT+DLVG++DQKLA+GISL+SI ADM GKA+I+GPLI EHAKGGKCIVFTQ
Sbjct: 301 LTQKHLKNPLTIDLVGENDQKLAEGISLYSIAADMHGKAAILGPLITEHAKGGKCIVFTQ 360

Query: 369 TKRDADRLAYAMARKFKCEALHGDISQSQRERTLSGFRAGRFNVLVATDVAARGLDIPNV 428
           TKRDADRLAYAMAR FKCEALHGDISQSQRERTLSGFR G FN+LVATDVAARGLDIP+V
Sbjct: 361 TKRDADRLAYAMARNFKCEALHGDISQSQRERTLSGFRDGHFNILVATDVAARGLDIPSV 420

Query: 429 DLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIHTQSQSRAVRVIEREVGCRFNELPRI 488
           DLVIH+ELPN +E FVHR+GRTGRAG+KGSAILI+TQ Q+RAV+VIEREVGCRF+ELPRI
Sbjct: 421 DLVIHYELPNTSETFVHRTGRTGRAGRKGSAILIYTQDQNRAVKVIEREVGCRFSELPRI 480

Query: 489 TVEDGAHVDMFSERGVGGRFSSSGGFRDPRTNDS--GRTGSQRGPSFRRSGDYDNSSFGR 548
            V DG    MF++ G GGRF   GG RD    D   GR+G Q    F RSG      FGR
Sbjct: 481 EV-DGGSTGMFNDIGAGGRF---GGARDRGYGDMGFGRSGRQAEYGFGRSGGNRGPGFGR 540

Query: 549 SSGR---DSFGAKGRNGGHTSGGFSSFGARKSNNAGDFRSSGSRRSGGFGDFDFDSGRSS 608
           S  +   +  G  GR G +   G  +FG   S+    F + GSRR+ GFG  DF SG   
Sbjct: 541 SGSQFSDEMGGYGGRFGSNNRSG--NFGGSASSRPSGFGNFGSRRTSGFG--DFGSGNPG 590

Query: 609 GRKSRNSG 611
           G K   SG
Sbjct: 601 GFKDNRSG 590

BLAST of Cp4.1LG06g05690 vs. TAIR10
Match: AT3G22330.1 (AT3G22330.1 putative mitochondrial RNA helicase 2)

HSP 1 Score: 687.6 bits (1773), Expect = 7.3e-198
Identity = 399/629 (63.43%), Postives = 463/629 (73.61%), Query Frame = 1

Query: 9   MSAVLLRRTTALAASRGRVSSTLLSPIANFLASRVGVNGSVIPAAEFGNFSCIGVMERPS 68
           M   +LRR+  L AS+  +S++L S       + V  +     A    + + IG  +  +
Sbjct: 1   MITTVLRRSL-LDASKRNLSASLTS------INTVLFHNLAPAATRVSDLALIGSSDVKA 60

Query: 69  GF--GFQSRGFHAVSRPLNFRASLVSLAEFAVEECVE--VSSSRS-GDEGLEIGKLGIAP 128
           GF  G +++G H  S PL+FRAS+VS A FA+ E  E  V  S S G +GL I +LGI+P
Sbjct: 61  GFPFGVEAKGIHFQSGPLDFRASMVSQAGFAISESSERRVGDSESVGGDGLAISELGISP 120

Query: 129 EIVSALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKK 188
           EIV AL  KGI KLFPIQ+AVLEPAM+GRDMIGRARTGTGKTLAFGIPI+DKII++NAK 
Sbjct: 121 EIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYNAKH 180

Query: 189 GKGRNPLALVLAPTRELARQVEKEFEEAAPSLDMICVYGGTPISSQMRQLGYGVDIAVGT 248
           G+GRNPL LVLAPTRELARQVEKEF E+APSLD IC+YGGTPI  QMRQL YGVD+AVGT
Sbjct: 181 GRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRQLDYGVDVAVGT 240

Query: 249 PGRLIDLLNRGSLNLSEVKFVVLDEADQMLQVGFQEDVEKILERLPRKRQSMMFSATMPS 308
           PGR+IDL+ RG+LNLSEV+FVVLDEADQMLQVGF EDVE ILE+LP KRQSMMFSATMPS
Sbjct: 241 PGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSMMFSATMPS 300

Query: 309 WIRKLSQNYLTNPLTVDLVGDSDQKLADGISLFSIVADMRGKASIIGPLIAEHAKGGKCI 368
           WIR L++ YL NPLTVDLVGDSDQKLADGI+ +SI+AD  G+ASIIGPL+ EHAKGGKCI
Sbjct: 301 WIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASIIGPLVTEHAKGGKCI 360

Query: 369 VFTQTKRDADRLAYAMARKFKCEALHGDISQSQRERTLSGFRAGRFNVLVATDVAARGLD 428
           VFTQTKRDADRL+YA+AR FKCEALHGDISQSQRERTL+GFR G FN+LVATDVAARGLD
Sbjct: 361 VFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAARGLD 420

Query: 429 IPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIHTQSQSRAVRVIEREVGCRFNE 488
           +PNVDL+IH+ELPNNTE FVHR+GRTGRAGKKGSAILI++Q QSRAV++IEREVG RF E
Sbjct: 421 VPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAVKIIEREVGSRFTE 480

Query: 489 LPRITVEDGAHVDMFSERGVGGRFSSS--GGFRDPRTNDSGRTGS--------------Q 548
           LP I VE G+   MF   G+G R   S  GG RD  ++  GR+G                
Sbjct: 481 LPSIAVERGS-ASMFE--GIGSRSGGSFGGGMRDRGSSFGGRSGGGGYGGSSGGYGGGRS 540

Query: 549 RGPSFRRSGDYDNSSFGRSSGRDSFGAKGRNGGHTSGGFSSFGARKSNNAGDFRSSGSRR 608
            G S R SGD D S FG S G  S    G +    SGG SSFG  +S        S + R
Sbjct: 541 GGSSNRYSGDSDRSGFG-SFGMRSPEGYGSDRSSQSGGRSSFGGGRSG------GSSNNR 600

Query: 609 SGGFGDFDFDSGRSSGRKSRNSGLFGDDD 617
           S GFGDF  D    SG +S   G FG +D
Sbjct: 601 SSGFGDFGSDRSSQSGGRSSFGG-FGSND 611

BLAST of Cp4.1LG06g05690 vs. TAIR10
Match: AT3G22310.1 (AT3G22310.1 putative mitochondrial RNA helicase 1)

HSP 1 Score: 653.7 bits (1685), Expect = 1.2e-187
Identity = 379/620 (61.13%), Postives = 447/620 (72.10%), Query Frame = 1

Query: 9   MSAVLLRRTTALAASRGRVSSTLLSPIANFLASRVGVNGSVIPAAEFGNFSCIGVMERPS 68
           M + +LRR+  L  SR  +++++ S  A    +      +V   A  G  +   +    S
Sbjct: 1   MISTVLRRSI-LGTSRRTLAASVTSINAALFHNLAPAAATVSDLAN-GATNVKSLPSNSS 60

Query: 69  GFGFQSRGFHAVSRPLNFRASLVSLAEFAVEECV------------EVSSSRSGDEGLEI 128
            FG + R FH  S P  FR+S+VS A FA +E              E   S  G +GL I
Sbjct: 61  PFGVKVRDFHVKSVPSEFRSSIVSSAGFAAQEYAPSYENDGGIGDSESVGSSGGGDGLAI 120

Query: 129 GKLGIAPEIVSALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 188
             LGI+PEIV AL+ +GI KLFPIQ+AVLEPAM+GRDMIGRARTGTGKTLAFGIPI+DKI
Sbjct: 121 ADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKI 180

Query: 189 IQFNAKKGKGRNPLALVLAPTRELARQVEKEFEEAAPSLDMICVYGGTPISSQMRQLGYG 248
           I+FNAK G+G+NP  LVLAPTRELARQVEKEF E+APSLD IC+YGGTPI  QMR+L YG
Sbjct: 181 IKFNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRELNYG 240

Query: 249 VDIAVGTPGRLIDLLNRGSLNLSEVKFVVLDEADQMLQVGFQEDVEKILERLPRKRQSMM 308
           +D+AVGTPGR+IDL+ RG+LNLSEV+FVVLDEADQMLQVGF EDVE IL++LP KRQSMM
Sbjct: 241 IDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSMM 300

Query: 309 FSATMPSWIRKLSQNYLTNPLTVDLVGDSDQKLADGISLFSIVADMRGKASIIGPLIAEH 368
           FSATMPSWIR L++ YL NPLT+DLVGDSDQKLADGI+++SI AD  G+ASIIGPL+ EH
Sbjct: 301 FSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKEH 360

Query: 369 AKGGKCIVFTQTKRDADRLAYAMARKFKCEALHGDISQSQRERTLSGFRAGRFNVLVATD 428
            KGGKCIVFTQTKRDADRLA+ +A+ +KCEALHGDISQ+QRERTL+GFR G F++LVATD
Sbjct: 361 GKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVATD 420

Query: 429 VAARGLDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIHTQSQSRAVRVIERE 488
           VAARGLD+PNVDLVIH+ELPNNTE FVHR+GRTGRAGKKGSAILIH Q Q+RAV++IE+E
Sbjct: 421 VAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKE 480

Query: 489 VGCRFNELPRITVEDGAHVDMFSERGVGGRFSSSGGFRDPRTNDSGRTGSQRGPSFRRSG 548
           VG RFNELP I VE G+   MF   GVG R  S G F   R+   G      G S  RSG
Sbjct: 481 VGSRFNELPSIAVERGS-ASMF--EGVGAR--SGGSFGGGRSGGGGY--GSYGSSSGRSG 540

Query: 549 DYDNSSFGRSSGRDSFGAKGRNGGHTSGGFSSFGARKSNNAGDFRSSGSRRSGGFGDFDF 608
                 +G SSGR   G     G   S    S G+ +S+  G F S GS  SGGFG    
Sbjct: 541 GGSYGGYGGSSGRSGGGGGSYGGSGGSSSRYSGGSDRSSGFGSFGSGGS--SGGFG--SD 600

Query: 609 DSGRSSGRKSRNSGLFGDDD 617
            S +SSGR S   G FG +D
Sbjct: 601 RSSQSSGRSS--FGGFGSND 605

BLAST of Cp4.1LG06g05690 vs. TAIR10
Match: AT5G26742.2 (AT5G26742.2 DEAD box RNA helicase (RH3))

HSP 1 Score: 477.6 bits (1228), Expect = 1.2e-134
Identity = 241/384 (62.76%), Postives = 294/384 (76.56%), Query Frame = 1

Query: 112 EGLEIGKLGIAPEIVSALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP 171
           E L I KL +   +  +LEK+GIT LFPIQRAVL PA+QGRD+I RA+TGTGKTLAFGIP
Sbjct: 100 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 159

Query: 172 ILDKIIQ----FNAKKGKGRNPLALVLAPTRELARQVEKEFEEAAPSLDMICVYGGTPIS 231
           I+ ++ +    + A +  GR P  LVLAPTRELA+QVEKE +E+AP L  +CVYGG   +
Sbjct: 160 IIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYT 219

Query: 232 SQMRQLGYGVDIAVGTPGRLIDLLNRGSLNLSEVKFVVLDEADQMLQVGFQEDVEKILER 291
            Q   L  GVD+ VGTPGR+IDL+   SL L EV+++VLDEADQML VGF+E VE ILE 
Sbjct: 220 IQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILEN 279

Query: 292 LPRKRQSMMFSATMPSWIRKLSQNYLTNPLTVDLVGDSDQKLADGISLFSIVADMRGKAS 351
           LP KRQSM+FSATMP+W++KL++ YL NPL +DLVGD D+KLA+GI L++I      K +
Sbjct: 280 LPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRT 339

Query: 352 IIGPLIAEHAKGGKCIVFTQTKRDADRLAYAMARKFKCEALHGDISQSQRERTLSGFRAG 411
           I+  LI  +AKGGK IVFTQTKRDAD ++ A++     EALHGDISQ QRERTL+ FR G
Sbjct: 340 ILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQG 399

Query: 412 RFNVLVATDVAARGLDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIHTQSQS 471
           +F VLVATDVA+RGLDIPNVDLVIH+ELPN+ E FVHRSGRTGRAGK+GSAIL+HT SQ 
Sbjct: 400 KFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQK 459

Query: 472 RAVRVIEREVGCRFNELPRITVED 492
           R VR +ER+VGC F  +   TV D
Sbjct: 460 RTVRSLERDVGCHFEFISPPTVGD 483

BLAST of Cp4.1LG06g05690 vs. TAIR10
Match: AT5G62190.1 (AT5G62190.1 DEAD box RNA helicase (PRH75))

HSP 1 Score: 298.1 bits (762), Expect = 1.3e-80
Identity = 167/378 (44.18%), Postives = 239/378 (63.23%), Query Frame = 1

Query: 116 IGKLGIAPEIVSALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDK 175
           + K  I+  +   L+  GI  LFPIQ +  +  + G D++GRARTG GKTLAF +PIL+ 
Sbjct: 98  VSKFRISAPLREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILES 157

Query: 176 IIQFNAKK----GKGRNPLALVLAPTRELARQVEKEFEEAAPSLDM--ICVYGGTPISSQ 235
           ++   AK     G GR+P  LVL PTRELA+QV  +F+    SL +   C+YGG     Q
Sbjct: 158 LVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLYGGDSYPVQ 217

Query: 236 MRQLGYGVDIAVGTPGRLIDLLNRGSLNLSEVKFVVLDEADQMLQVGFQEDVEKILERLP 295
             +L  GVDI VGTPGR+ D + R +L+ S ++F VLDEAD+ML++GF EDVE IL ++ 
Sbjct: 218 EGKLKRGVDIVVGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVEDVELILGKVE 277

Query: 296 --RKRQSMMFSATMPSWIRKLSQNYLT-NPLTVDLVGDSDQKLADGISLFSIVADMRGKA 355
              K Q+++FSAT+PSW++ +S  +L  +  T+DLVG+   K ++ +   +I  +    A
Sbjct: 278 DSTKVQTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHIAIPCNKAAMA 337

Query: 356 SIIGPLIAEHAKGGKCIVFTQTKRDADRLAYAMARKFKCEALHGDISQSQRERTLSGFRA 415
            +I  +I+ ++ GG+ I+F +TK     L+  +       ALHG+I QSQRE TL+GFR 
Sbjct: 338 RLIPDIISCYSSGGQTIIFAETKVQVSELSGLLDGS---RALHGEIPQSQREVTLAGFRN 397

Query: 416 GRFNVLVATDVAARGLDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIHTQSQ 475
           G+F  LVAT+VAARGLDI +V L+I  E P   E ++HRSGRTGRAG  G A+ ++  S+
Sbjct: 398 GKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGRTGRAGNTGVAVTLY-DSR 457

Query: 476 SRAVRVIEREVGCRFNEL 485
             +V  IE+E G +F  L
Sbjct: 458 KSSVSRIEKEAGIKFEHL 471

BLAST of Cp4.1LG06g05690 vs. TAIR10
Match: AT3G06480.1 (AT3G06480.1 DEAD box RNA helicase family protein)

HSP 1 Score: 259.2 bits (661), Expect = 6.4e-69
Identity = 186/524 (35.50%), Postives = 272/524 (51.91%), Query Frame = 1

Query: 120 GIAPEIVSALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQF 179
           G+ PEI+  L   G     PIQ      A+Q RD++  A+TG+GKTL + IP    I+  
Sbjct: 441 GLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAF--ILLR 500

Query: 180 NAKKGKGRNPLALVLAPTRELARQVEKEFEEAAPS--LDMICVYGGTPISSQMRQLGYGV 239
           + +      P  L+LAPTRELA Q++ E      S  +   C+YGG P   Q+++L  G 
Sbjct: 501 HCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGA 560

Query: 240 DIAVGTPGRLIDLLNRGSLNLSEVKFVVLDEADQMLQVGFQEDVEKILERLPRKRQSMMF 299
           DI V TPGRL D+L    ++  +V  +VLDEAD+ML +GF+  + KI+  +P +RQ++M+
Sbjct: 561 DIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMY 620

Query: 300 SATMPSWIRKLSQNYLTNPLTVDLVGDSDQKLAD-GISLFSIVADMRGKASIIGPLIAEH 359
           +AT P  +RK++ + L NP+ V+ +G  D+  A+  I+ +  V     K   +  ++   
Sbjct: 621 TATWPKEVRKIASDLLVNPVQVN-IGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQ 680

Query: 360 AKGGKCIVFTQTKRDADRLAYAMARKFKCEALHGDISQSQRERTLSGFRAGRFNVLVATD 419
            +G K I+F  TKR  D LA ++ R F    +HGD +Q +R+  L+ FR+G+  VL+ATD
Sbjct: 681 ERGSKVIIFCSTKRLCDHLARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATD 740

Query: 420 VAARGLDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIHTQSQSR----AVRV 479
           VAARGLDI ++ +VI+++ P   E +VHR GRTGRAG  G A    T+   +     ++V
Sbjct: 741 VAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLIKV 800

Query: 480 IE---REVGCRFNEL---------PRITVEDGAHVDMFSERGVGGRFSSSGGFRDPRTND 539
           +E   ++V  +  ++         P  + +    V+ F   G G R+ S GGF       
Sbjct: 801 LEGANQQVPPQVRDIAMRGGGGGGPGYSQDRRGMVNRFDSGGGGTRWDSGGGFGGRGGGF 860

Query: 540 SGRTGSQRGPSFRRSGDYD--NSSFGRSSGR-----DSFGAKGRNG--------GHTS-- 599
           SGR G   G    R G +      FG   GR     DSFG  G  G        GH +  
Sbjct: 861 SGREGGFGG----REGGFGGREGGFGGRGGRFGMRDDSFGRGGNRGRGFTGPDAGHMNVG 920

Query: 600 --GGFSSFGARKSNNAGDF-RSSGSRRSGGFGDFDFDSGRSSGR 605
             GGF  FG   +  +  F R SG     G G FD   GRS  R
Sbjct: 921 GRGGFGRFGNNNNMESRGFGRGSGRGFGRGVGRFDNRRGRSRSR 957

BLAST of Cp4.1LG06g05690 vs. NCBI nr
Match: gi|659129374|ref|XP_008464653.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 53 [Cucumis melo])

HSP 1 Score: 891.3 bits (2302), Expect = 9.5e-256
Identity = 492/639 (77.00%), Postives = 535/639 (83.72%), Query Frame = 1

Query: 9   MSAVLLRRTTALAASRGRVSSTLLSPIANFLASRVGVNGSVIPAAEFGNFSCIGVMERPS 68
           MSA+LLRR++ALAAS GR++STL +PIANFL+S V VNG V+PAA+F +FS IGV E+P 
Sbjct: 2   MSAILLRRSSALAASGGRINSTLFAPIANFLSSPVVVNGGVVPAADFEHFSTIGVTEKPL 61

Query: 69  GFGFQSRGFHAVSRPLNFRASLVSLAEFAVEECVEVSSSRSGDEGLEIGKLGIAPEIVSA 128
           GFGFQS+GFHA S PLNF+ASLVS AEFAVE+    S SRSGDEGLEIGKLGIAPEIVSA
Sbjct: 62  GFGFQSKGFHAASGPLNFKASLVSKAEFAVEDYDCASGSRSGDEGLEIGKLGIAPEIVSA 121

Query: 129 LEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKKGKGRN 188
           L KKGITKLFPIQRAVLEPA+QGRDMIGRARTGTGKTLAFGIPILDKIIQFNAK G+GRN
Sbjct: 122 LAKKGITKLFPIQRAVLEPAIQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKNGRGRN 181

Query: 189 PLALVLAPTRELARQVEKEFEEAAPSLDMICVYGGTPISSQMRQLGYGVDIAVGTPGRLI 248
           PLALVLAPTRELARQVEKEF+EAAPSLD ICVYGG PIS QMRQL YGVDIAVGTPGRLI
Sbjct: 182 PLALVLAPTRELARQVEKEFQEAAPSLDTICVYGGAPISQQMRQLDYGVDIAVGTPGRLI 241

Query: 249 DLLNRGSLNLSEVKFVVLDEADQMLQVGFQEDVEKILERLPRKRQSMMFSATMPSWIRKL 308
           DLLNRGSLNLSEV+F+VLDEADQMLQVGFQEDVEKILERLP+KRQSMMFSATMPSWI KL
Sbjct: 242 DLLNRGSLNLSEVQFIVLDEADQMLQVGFQEDVEKILERLPQKRQSMMFSATMPSWILKL 301

Query: 309 SQNYLTNPLTVDLVGDSDQKLADGISLFSIVADMRGKASIIGPLIAEHAKGGKCIVFTQT 368
           S+NYLTNPLT+DLVGDSDQKLADGISLFSIV++  GKASIIGPLI EH KGGKCIVFTQT
Sbjct: 302 SRNYLTNPLTIDLVGDSDQKLADGISLFSIVSETYGKASIIGPLITEHGKGGKCIVFTQT 361

Query: 369 KRDADRLAYAMARKFKCEALHGDISQSQRERTLSGFRAGRFNVLVATDVAARGLDIPNVD 428
           KRDADRLAYAM R  +CEALHGDISQSQRERTLSGFR GRFNVLVATDVAARGLDIPNVD
Sbjct: 362 KRDADRLAYAMGRNLRCEALHGDISQSQRERTLSGFRDGRFNVLVATDVAARGLDIPNVD 421

Query: 429 LVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIHTQSQSRAVRVIEREVGCRFNELPRIT 488
           LVIHFELPNNTEIFVHRSGRTGRAGKKGS ILI++Q Q+RA+R+IEREVGCRFNELPRIT
Sbjct: 422 LVIHFELPNNTEIFVHRSGRTGRAGKKGSVILIYSQDQTRAIRMIEREVGCRFNELPRIT 481

Query: 489 VEDGAHVDMFSERGVGGRFSSSGGFRDPRTNDSGRTGSQRGPSFRRSGDYDNSSFGRSSG 548
           VE GAHVDMFS    GG F   GG RD + N+SGR G+ RG SF RSG Y++SSFGRS  
Sbjct: 482 VEAGAHVDMFS----GGSF---GGLRDRQMNNSGRFGN-RGGSFGRSGGYESSSFGRS-- 541

Query: 549 RDSFGAKGRNGGHTSGGFSSFGARKSNNAGDF------RSSG-------SRRSGGFGDFD 608
                  GRN G +SG F SFG+R SNN+G F      RS G       S RSGGFG+F 
Sbjct: 542 ------MGRNSGPSSGSFGSFGSRNSNNSGGFGGPDFGRSPGRFGDFGSSNRSGGFGNFG 601

Query: 609 FDSGRSSG----RKSRNSGLFGD--DDMEANQSSRRRKF 629
                  G      S  SG FGD  D ++A Q + RR+F
Sbjct: 602 SSGSGRGGFGDFGSSNRSGGFGDFGDSLDAKQGTGRRQF 624

BLAST of Cp4.1LG06g05690 vs. NCBI nr
Match: gi|778695414|ref|XP_004149532.2| (PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Cucumis sativus])

HSP 1 Score: 881.3 bits (2276), Expect = 9.8e-253
Identity = 491/654 (75.08%), Postives = 537/654 (82.11%), Query Frame = 1

Query: 9   MSAVLLRRTTALAASRGRVSSTLLSPIANFLASRVGVNGSVIPAAEFGNFSCIGVMERPS 68
           MSA+LLRR++ALAAS GR++STL +PIANFL+S V VNG V+PAA+F +FS IGV E+  
Sbjct: 2   MSAILLRRSSALAASGGRINSTLFAPIANFLSSPVVVNGGVVPAADFQHFSTIGVTEKSL 61

Query: 69  GFGFQSRGFHAVSRPLNFRASLVSLAEFAVEECVEVSSSRSGDEGLEIGKLGIAPEIVSA 128
           GFGFQS+GFHA S PLNF+ASLVS AEFAVE+    SSS+SGDEGLEIGKLGIAPEIVSA
Sbjct: 62  GFGFQSKGFHAASGPLNFKASLVSKAEFAVEDYDCASSSKSGDEGLEIGKLGIAPEIVSA 121

Query: 129 LEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKKGKGRN 188
           L +KGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDK+IQFNAK G+GRN
Sbjct: 122 LARKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKLIQFNAKNGRGRN 181

Query: 189 PLALVLAPTRELARQVEKEFEEAAPSLDMICVYGGTPISSQMRQLGYGVDIAVGTPGRLI 248
           PLALVLAPTRELARQVEKEF+EAAPSLD ICVYGG PIS QMRQL YGVDIAVGTPGRLI
Sbjct: 182 PLALVLAPTRELARQVEKEFQEAAPSLDTICVYGGAPISQQMRQLDYGVDIAVGTPGRLI 241

Query: 249 DLLNRGSLNLSEVKFVVLDEADQMLQVGFQEDVEKILERLPRKRQSMMFSATMPSWIRKL 308
           DLLNRGSLNLSEV+FVVLDEADQMLQVGFQEDVEKILERLP+KRQSMMFSATMPSWI KL
Sbjct: 242 DLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQSMMFSATMPSWILKL 301

Query: 309 SQNYLTNPLTVDLVGDSDQKLADGISLFSIVADMRGKASIIGPLIAEHAKGGKCIVFTQT 368
           S+NYL NPLT+DLVGDSDQKLADGISLFS+V++  GKASIIGPLI EH KGGKCI+FTQT
Sbjct: 302 SRNYLNNPLTIDLVGDSDQKLADGISLFSVVSETYGKASIIGPLITEHGKGGKCIIFTQT 361

Query: 369 KRDADRLAYAMARKFKCEALHGDISQSQRERTLSGFRAGRFNVLVATDVAARGLDIPNVD 428
           KRDADRLAYAM R  +CEALHGDISQSQRERTLSGFR GRFNVLVATDVAARGLDIPNVD
Sbjct: 362 KRDADRLAYAMGRNLRCEALHGDISQSQRERTLSGFRDGRFNVLVATDVAARGLDIPNVD 421

Query: 429 LVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIHTQSQSRAVRVIEREVGCRFNELPRIT 488
           LVIHFELPNNTEIFVHRSGRTGRAGKKGS ILI++Q Q+RA+R+IEREVGCRFNELPRIT
Sbjct: 422 LVIHFELPNNTEIFVHRSGRTGRAGKKGSVILIYSQDQTRAIRMIEREVGCRFNELPRIT 481

Query: 489 VEDGAHVDMFSERGVGGRFSSSGGFRDPRTNDSGRTGSQRGPSFRRSGDYDNSSFGRSSG 548
           VE GAHVDMFS    GG F   GGF D + N+SGR G+ RG SF RSG Y++SSFGRS  
Sbjct: 482 VEAGAHVDMFS----GGSF--GGGFGDRQMNNSGRFGN-RGGSFGRSGGYESSSFGRSI- 541

Query: 549 RDSFGAKGRNGGHTSGGFSSFGARKSNNAG-----DFRSSGSR----------------- 608
                  GRN G +SG F SFG+R SN++G     DF  S  R                 
Sbjct: 542 -------GRNSGPSSGSFGSFGSRNSNSSGGFGRPDFGQSAGRFGDSGSSNRSGGFGNFG 601

Query: 609 -----RSGGFGDF-DFDSGRSSG----RKSRNSGLFG--DDDMEANQSSRRRKF 629
                RSGGFGDF    SGRS G      S  SG FG   D+++A Q + RRKF
Sbjct: 602 SSGSGRSGGFGDFGSSGSGRSGGFGDFGSSNRSGGFGGFGDNLDAKQGTGRRKF 640

BLAST of Cp4.1LG06g05690 vs. NCBI nr
Match: gi|1009127748|ref|XP_015880859.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 53 [Ziziphus jujuba])

HSP 1 Score: 734.6 bits (1895), Expect = 1.5e-208
Identity = 407/566 (71.91%), Postives = 451/566 (79.68%), Query Frame = 1

Query: 57  NFSCIGVMERPSGFGFQSRGFHAVSRPLNFRASLVSLAEFAVEECVEVSSSRSG---DEG 116
           +FS     +    +GFQ+R FHA S  LN+RAS V  AEFA+ E         G   DE 
Sbjct: 56  SFSIFRAPQPDIPYGFQTREFHAKSGTLNYRASAVLQAEFAMHEYSSYEEPAKGSGDDEN 115

Query: 117 LEIGKLGIAPEIVSALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 176
           LEI +LGI+ EIVSAL K+GITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP+L
Sbjct: 116 LEIARLGISEEIVSALAKRGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPVL 175

Query: 177 DKIIQFNAKKGKGRNPLALVLAPTRELARQVEKEFEEAAPSLDMICVYGGTPISSQMRQL 236
           DKII+FNAK G+GRNPLALVLAPTRELARQVEKEF E+APSLD ICVYGGTPIS QMRQL
Sbjct: 176 DKIIRFNAKHGRGRNPLALVLAPTRELARQVEKEFYESAPSLDTICVYGGTPISRQMRQL 235

Query: 237 GYGVDIAVGTPGRLIDLLNRGSLNLSEVKFVVLDEADQMLQVGFQEDVEKILERLPRKRQ 296
            YGVD+AVGTPGR+IDLLNRG+LNLSEV+FVV+DEADQMLQVGFQEDVE+ILE+LP+KRQ
Sbjct: 236 DYGVDVAVGTPGRIIDLLNRGALNLSEVQFVVIDEADQMLQVGFQEDVERILEKLPQKRQ 295

Query: 297 SMMFSATMPSWIRKLSQNYLTNPLTVDLVGDSDQKLADGISLFSIVADMRGKASIIGPLI 356
           SMMFSATMPSWIRKL+QNYL +PL++DLVGDSDQKLADGISL+SI  +M GKASI+GPLI
Sbjct: 296 SMMFSATMPSWIRKLTQNYLKDPLSIDLVGDSDQKLADGISLYSIATEMYGKASIVGPLI 355

Query: 357 AEHAKGGKCIVFTQTKRDADRLAYAMARKFKCEALHGDISQSQRERTLSGFRAGRFNVLV 416
            EHAKGGKCIVFTQTKRDADRLAYAMAR F+CEALHGDISQ+QRERTL+GFR G FN+LV
Sbjct: 356 TEHAKGGKCIVFTQTKRDADRLAYAMARNFRCEALHGDISQAQRERTLAGFRDGNFNILV 415

Query: 417 ATDVAARGLDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIHTQSQSRAVRVI 476
           ATDVA+RGLDIPNVDLVIH+ELPNN+EIFVHRSGRTGRAGKKGSAILI+TQ QSRAVRVI
Sbjct: 416 ATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGSAILIYTQDQSRAVRVI 475

Query: 477 EREVGCRFNELPRITVEDGAHVDMFSERGVGGRFSSSGGFRDPRTNDSGRTGSQRGPSFR 536
           ER+VGCRF ELPRI VE G   DMF + G GGRF SSGG RD R +  GR G   G  F 
Sbjct: 476 ERDVGCRFTELPRIAVEGGDR-DMFGDIGGGGRFGSSGGMRD-RRDSFGRFGGPGGGGFG 535

Query: 537 RSGDYDNSSFGRSSG-----RDSFGAKGRNGGHTSGGFSSFGARKSNNAGDFRSSGSRRS 596
           R G      FGRS+G      +  G  G +G   SGGF  FG       G  RSS S   
Sbjct: 536 RPG------FGRSNGYGGPSTNRGGNVGGSGFSRSGGFGEFG-------GSGRSSQS-SG 595

Query: 597 GGFGDFDFDSGRSSGRKSRNSGLFGD 615
           GGFGDF       SGR S++ G FGD
Sbjct: 596 GGFGDFG-----GSGRSSQSGGGFGD 600

BLAST of Cp4.1LG06g05690 vs. NCBI nr
Match: gi|1021549871|ref|XP_016166332.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Arachis ipaensis])

HSP 1 Score: 712.2 bits (1837), Expect = 7.9e-202
Identity = 408/615 (66.34%), Postives = 468/615 (76.10%), Query Frame = 1

Query: 9   MSAVLLRRTTALAASRGRVSSTLLSPIANFLASRVGVNGSVIPAAEFGNFSCIGVMERPS 68
           M   +LRRT++ A ++  +++ + S    FL      + S          S +G + R S
Sbjct: 1   MLTTILRRTSSSAITKRSLAAAVTSATDPFLPQLTSSSAS-------SGDSPVGELRRFS 60

Query: 69  GF-GF-QSRGFHAVSRPLNFRASLVSLAEFAVEECVEVSSSR--SGDEGLEIGKLGIAPE 128
           G  GF + R FH+ S PLNFR+S  S AEFAVE+      SR  S DEGLEI KLGI+ +
Sbjct: 61  GLTGFLKGRAFHSNSGPLNFRSSFCSRAEFAVEDYAYEEGSRGNSADEGLEIAKLGISQD 120

Query: 129 IVSALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKKG 188
           IVSAL KKGI KLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPI+DKIIQFNAK G
Sbjct: 121 IVSALAKKGIFKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIIDKIIQFNAKHG 180

Query: 189 KGRNPLALVLAPTRELARQVEKEFEEAAPSLDMICVYGGTPISSQMRQLGYGVDIAVGTP 248
           +GRNPLALVLAPTRELARQVEKEF+EAAP+LD ICVYGGTPIS QMRQL YGVDIAVGTP
Sbjct: 181 RGRNPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGTPISRQMRQLDYGVDIAVGTP 240

Query: 249 GRLIDLLNRGSLNLSEVKFVVLDEADQMLQVGFQEDVEKILERLPRKRQSMMFSATMPSW 308
           GR+IDLLNRG+LNL EVK+VV+DEADQMLQVGFQEDVEKILERLP KRQ++MFSATMPSW
Sbjct: 241 GRIIDLLNRGALNLQEVKYVVIDEADQMLQVGFQEDVEKILERLPPKRQTLMFSATMPSW 300

Query: 309 IRKLSQNYLTNPLTVDLVGDSDQKLADGISLFSIVADMRGKASIIGPLIAEHAKGGKCIV 368
           I+++++NYL +PLT+DLVG+SDQKLADGISL+SI  DM  KA I+GPLI EHAKGGKCIV
Sbjct: 301 IKQITRNYLQDPLTIDLVGESDQKLADGISLYSIATDMYVKAGILGPLITEHAKGGKCIV 360

Query: 369 FTQTKRDADRLAYAMARKFKCEALHGDISQSQRERTLSGFRAGRFNVLVATDVAARGLDI 428
           FTQTKRDADRL Y +A+  +CEALHGDISQ+QRERTL+GFR G FNVLVATDVA+RGLDI
Sbjct: 361 FTQTKRDADRLTYGLAKTVQCEALHGDISQAQRERTLAGFRNGHFNVLVATDVASRGLDI 420

Query: 429 PNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIHTQSQSRAVRVIEREVGCRFNEL 488
           PNVDLVIHF+LPN++EIFVHRSGRTGRAGKKG+AIL++T+ QSRAV+ IER+VGCRF+EL
Sbjct: 421 PNVDLVIHFDLPNSSEIFVHRSGRTGRAGKKGTAILVYTEDQSRAVKTIERDVGCRFSEL 480

Query: 489 PRITVEDGAHVDMFSERGVGGRFSSSGGFRDPRTNDSGRTGSQRGPSFRRSGDYDNSSFG 548
           PRI V+ G+ VDM      GGRF S GG RD R+ DS   G  R P F RSG Y NS FG
Sbjct: 481 PRIAVDPGS-VDM-----GGGRFGSYGGGRDRRSGDS---GFGRSPGFGRSGGYGNSGFG 540

Query: 549 RSSGRDSFGAKGRNGGHTSGGFSSFGARKSNNAGDFRSSGSRRSGGFGDFD-FDSGRS-- 608
           RS    S+G    N G TS  F   G  +        SSG    G FG  D F SG+S  
Sbjct: 541 RS----SYG----NSGSTSSRFGDSGMSRPRGGFSGDSSGGSGFGRFGSSDGFGSGQSGS 591

Query: 609 -SGRKSRNSGLFGDD 616
            SG  SR  G  G D
Sbjct: 601 RSGGFSRPGGFGGSD 591

BLAST of Cp4.1LG06g05690 vs. NCBI nr
Match: gi|595972291|ref|XP_007217634.1| (hypothetical protein PRUPE_ppa002643mg [Prunus persica])

HSP 1 Score: 711.1 bits (1834), Expect = 1.8e-201
Identity = 409/616 (66.40%), Postives = 468/616 (75.97%), Query Frame = 1

Query: 9   MSAVLLRRTTALAASRGRVS-STLLSPIANFLASR-----VGVNGSVIPAAEFGNFSCIG 68
           M   +LRR+ ++A  R   +  TLL    +FLA+      +  NG++   A     S   
Sbjct: 1   MMTTILRRSPSIATVRSFAAIETLLFNHHSFLAASTPDLVLPANGALCGEARSYTVSAPK 60

Query: 69  VMERPSGFGFQSRGFHAVSRPLNFRASLVSLAEFAVEECVEVSSSRSG-DEGLEIGKLGI 128
               PS +GFQ R  HA S PLN+RAS    AEFAV+   + SS +SG D+GLEI KLGI
Sbjct: 61  PKLGPS-YGFQVRDLHAKSGPLNYRASTALSAEFAVDYSYDESSKKSGQDDGLEIAKLGI 120

Query: 129 APEIVSALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNA 188
           + +IVSAL KKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI+++NA
Sbjct: 121 SQDIVSALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKILKYNA 180

Query: 189 KKGKGRNPLALVLAPTRELARQVEKEFEEAAPSLDMICVYGGTPISSQMRQLGYGVDIAV 248
           K G+GRNPLALVLAPTRELA+QVEKEF E+AP LD ICVYGGTPISSQMRQL YGVD+AV
Sbjct: 181 KHGRGRNPLALVLAPTRELAKQVEKEFHESAPGLDTICVYGGTPISSQMRQLDYGVDVAV 240

Query: 249 GTPGRLIDLLNRGSLNLSEVKFVVLDEADQMLQVGFQEDVEKILERLPRKRQSMMFSATM 308
           GTPGR+IDL+NRG+LNLSEV+FVVLDEADQMLQVGFQE VE ILE+LP+KRQ++MFSATM
Sbjct: 241 GTPGRVIDLINRGALNLSEVQFVVLDEADQMLQVGFQEAVEIILEKLPKKRQTLMFSATM 300

Query: 309 PSWIRKLSQNYLTNPLTVDLVGDSDQKLADGISLFSIVADMRGKASIIGPLIAEHAKGGK 368
           P WI+KL+QNYL NP  +DLVG+SDQKLADGISLFSI +D  GKASIIGPLI  HAKGGK
Sbjct: 301 PGWIKKLTQNYLKNPEVIDLVGESDQKLADGISLFSISSDSYGKASIIGPLITAHAKGGK 360

Query: 369 CIVFTQTKRDADRLAYAMARKFKCEALHGDISQSQRERTLSGFRAGRFNVLVATDVAARG 428
           CIVFTQTKRDADRLAYAM+R +KCEALHGDI+Q+QRERTL+GFR G FN+LVATDVAARG
Sbjct: 361 CIVFTQTKRDADRLAYAMSRSYKCEALHGDINQTQRERTLAGFRDGNFNILVATDVAARG 420

Query: 429 LDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSAILIHTQSQSRAVRVIEREVGCRF 488
           LD+PNVDLVIH+ELPNN+EIFVHRSGRTGRAGKKGSAIL++TQ QSRAVR IE++VGC+F
Sbjct: 421 LDVPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGSAILVYTQDQSRAVRTIEQDVGCKF 480

Query: 489 NELPRITVEDGAHVDMFSERGVGGRFSSSGGFRDPRTNDSGRTGSQRGPSFRRSGDYDNS 548
            ELPRI V DG  +DM  +    GRF++           S R G Q GP F R G     
Sbjct: 481 TELPRIAV-DGKSIDMMPDM---GRFNTK----------SSRFG-QAGPGFSRPG----- 540

Query: 549 SFGRSSG-RDSFGAKGRNGGHTSGGFSSFGARKSNNAGDFRSSGSRRSGGFGDFDFDSGR 608
            FGRSSG  DS G  GR+ G   G F SFG   + + G F  SGS R G FG   F  GR
Sbjct: 541 -FGRSSGYGDSSGQMGRSSGSRPGRFGSFG-DSAQSGGGFSGSGSNRGGNFGGSGF--GR 586

Query: 609 SSGRKSRNSGLFGDDD 617
           SSG     SG FG  D
Sbjct: 601 SSG-----SGGFGSSD 586

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RH53_ARATH1.3e-19663.43DEAD-box ATP-dependent RNA helicase 53 OS=Arabidopsis thaliana GN=RH53 PE=2 SV=1[more]
RH9_ARATH2.1e-18661.13DEAD-box ATP-dependent RNA helicase 9 OS=Arabidopsis thaliana GN=RH9 PE=2 SV=1[more]
RH53_ORYSJ2.6e-17357.64DEAD-box ATP-dependent RNA helicase 53 OS=Oryza sativa subsp. japonica GN=Os07g0... [more]
RH9_ORYSJ1.8e-16959.25DEAD-box ATP-dependent RNA helicase 9 OS=Oryza sativa subsp. japonica GN=Os12g06... [more]
RH3_ORYSJ3.6e-13862.37DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japo... [more]
Match NameE-valueIdentityDescription
A0A0A0KZ67_CUCSA6.8e-25375.08Uncharacterized protein OS=Cucumis sativus GN=Csa_4G616790 PE=4 SV=1[more]
M5XBE5_PRUPE1.2e-20166.40Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002643mg PE=4 SV=1[more]
A0A059A197_EUCGR1.6e-20170.36Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01327 PE=4 SV=1[more]
A0A0D2VV62_GOSRA6.7e-20065.42Uncharacterized protein OS=Gossypium raimondii GN=B456_012G039900 PE=4 SV=1[more]
A0A0B0N082_GOSAR1.7e-19865.63DEAD-box ATP-dependent RNA helicase 53-like protein OS=Gossypium arboreum GN=F38... [more]
Match NameE-valueIdentityDescription
AT3G22330.17.3e-19863.43 putative mitochondrial RNA helicase 2[more]
AT3G22310.11.2e-18761.13 putative mitochondrial RNA helicase 1[more]
AT5G26742.21.2e-13462.76 DEAD box RNA helicase (RH3)[more]
AT5G62190.11.3e-8044.18 DEAD box RNA helicase (PRH75)[more]
AT3G06480.16.4e-6935.50 DEAD box RNA helicase family protein[more]
Match NameE-valueIdentityDescription
gi|659129374|ref|XP_008464653.1|9.5e-25677.00PREDICTED: DEAD-box ATP-dependent RNA helicase 53 [Cucumis melo][more]
gi|778695414|ref|XP_004149532.2|9.8e-25375.08PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Cucumis sativus][more]
gi|1009127748|ref|XP_015880859.1|1.5e-20871.91PREDICTED: DEAD-box ATP-dependent RNA helicase 53 [Ziziphus jujuba][more]
gi|1021549871|ref|XP_016166332.1|7.9e-20266.34PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Arachis ipaensis][more]
gi|595972291|ref|XP_007217634.1|1.8e-20166.40hypothetical protein PRUPE_ppa002643mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014014RNA_helicase_DEAD_Q_motif
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR001650Helicase_C
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0009658 chloroplast organization
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0006364 rRNA processing
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG06g05690.1Cp4.1LG06g05690.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 348..453
score: 9.6
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 373..453
score: 3.0
IPR001650Helicase, C-terminalPROFILEPS51194HELICASE_CTERcoord: 348..492
score: 22
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 138..307
score: 9.0
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 133..336
score: 2.7
IPR014001Helicase superfamily 1/2, ATP-binding domainPROFILEPS51192HELICASE_ATP_BIND_1coord: 145..319
score: 32
IPR014014RNA helicase, DEAD-box type, Q motifPROFILEPS51195Q_MOTIFcoord: 114..142
score: 8
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 323..485
score: 3.4E-48coord: 103..322
score: 8.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 188..474
score: 5.88
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 16..621
score:
NoneNo IPR availablePANTHERPTHR24031:SF326DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-RELATEDcoord: 16..621
score:

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG06g05690Cp4.1LG02g02620Cucurbita pepo (Zucchini)cpecpeB463
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG06g05690Cucurbita pepo (Zucchini)cpecpeB469
Cp4.1LG06g05690Cucurbita maxima (Rimu)cmacpeB503
Cp4.1LG06g05690Cucurbita moschata (Rifu)cmocpeB461
Cp4.1LG06g05690Melon (DHL92) v3.5.1cpemeB736
Cp4.1LG06g05690Melon (DHL92) v3.6.1cpemedB863
Cp4.1LG06g05690Silver-seed gourdcarcpeB0432