Cp4.1LG06g04600 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG06g04600
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionSWAP/surp RNA-binding domain-containing protein isoform 2
LocationCp4.1LG06 : 2264288 .. 2268091 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAATGCATCAATTCCCTAGTTCGATTTCAGAGTCGGGACCGGGGCGGATGCGTTTATCGCAGGTTCGCTTGAAGCCCTAAGGATCCATTTCGAAGACCGGAAATTACAGCGGCGACCGGCGCCGAGCTCGTCGGAGTCGTCGTGGAATTGCAAGAACGAAGAGAGAGTGCGAAGCAGCTTGGAGGCTTGTGTGAAAGACGACGCTGGTTAGTGTAGATATGTTCTGGCACTAAGCAATTTTTCTTTTTTTCTTTTTCTGTTATGGACGAATTTCCGTTATGTAGCTGAGATTTTGATGAAAAAGATACAGAGAAATTATAGGATTTTTGTTCGCAATGTTCTGTAAATGATGTGCGAAAGTACTGCAAGCTAAGCGGTTTGTGTATGCTTGTTTTTTAGGATTTTACTTTTGAACTCTCAGGAGTAAGTCAAATGTAGTTTGTTAATACTTACTTTCAATTTGGAGTTGTTTGATGATAAGAAATGGGGATGGGAGGAAATTGTAGCTTTTGATTGTTTGGAGGATGATTAATGATCTGTTTCTTTGCGAAATTATAGCTTTTGATTGCTTGGAGGATGATTAAGGATTTGTTTCTTTGCGAAATTTGTGCCTGCAGAGTGAAGATTTTGTGGAGATTGTTATCCAGCTGATAACTGATATAGAATTATCGATAGCTAATGGATCGGCAGTCTCAAGATTATGCAGCTGCTTCTGCTATGGCTTATGCCCAACAGCAGAGACAGGCAACTAATCTGCAACAGCAGCAGCCATTTGGATTTCATGGCCAACATCAACAATTTCCTCCATCTGTTCCGGGTCCTCCTTTCCTACCGCCGCATCCTGCTATGCAACAGTTCCCTTATCACCACCCTATGCAGCAGCAGCAGCAGCCACAGCCCCACCCGCATCATCCACCCCACCCCCACCTTCTTCATCTTCAACAGCAGCAGCCACCACCAGCTTTTGCTCCGCATTTACCCCCTCCCATGGGTCATTCACCTTTCCATGGTCCCTATGATTCTGCTCCTCCACCAGTTCCACCTCCTTCAGACCCTGAGCTCCAAAAACGGATAGACAAACTTGTGGAGTATATCATAAAGAATGGCCCTGAATTTGAATCCATGATACGTGAAAAGCAACAGGACAACCCAGCATATGGCTTTCTCTTTGGTGGGGAGGGGCACGGTTACTACCGTTATAAGCTTTGGCTAATGACTCGCCCCCACCTTGGAGGACCCTTCAACCCTCCCTTTCCATCTTCATCCATGCCCATGTTGCACCCTCATCCAAATCCTATGACAAGTCCATCTCCCCTTAATGCTCCTCCATTGAATGCTTCTGCATCAATAATTGGGGGTCCTCAAATGCATCAAACTTCTTTTGCTTCTTTCTACGAGCAGCAGCAGCACCATCAACAGGCTTTTGGAGTTCCTGGTCGGTCGGATTACGATCAATCTTCAAAATCTTTTAAAGGGCTTTCTGGACCTCTTCCTTCTGATGTTGCTTTGGAGCTCAACAATGTGCTTAGTAATCTCACTGGTGCTAAAGAATCAATTAAAGGAGCTAAAACTTGGTTCATGCAGCGGTCTCCTTTTGCTCCAGCCANGAGGCGCCAAAAATGGGGTTTTTGGGATTAAGTCAAGCAGCCGCTCTCGCGCCACTCCATTAGGGTTTTAGGGCCATGTCATTTTATCTCTTTTTTTTTTTTTTTTTTTTTTTNGCCATGGCCGAGGCACTTAGAGACATGGTATTTAACATAGATGATTCTGAGAAGCAACTTCATATAATATACCTTGTCAATGACATTCTTTTTGAGAGGTACGCTACCATATGATTGCTTTCGTTATTGTTATTTCAAATTTACAATTTCTTGGGTTAGTGCATTTAGCATGCTGCAGTTCATGATTGTTGTTGAATACCATGTACATCTTTCTTTATTTTCTTAGAACTTTTGCAAAGTAACTGCTCCTTTAGTGAGGGATGTTCTCTCCTTTCTTGCTCCTTAAATAGAATCACATTGTTCTATGTTCTACTTTAATGGTTCTTGAATGAGTGCGTCAATATTAATGAAGTGCATTGATTGTATTCAAGTTAATTCCTTCGTTTCCTGATCACATTCAGTTGATGGTTTTTTTGTTCTGATAGAAGTTCTATTCAATAAATCATCATTCGTGTTGACAAACTAATCTGATAGCAGTACTACAACATAATTATTCGAAGGGTGAGTTTTTTCCCCATTAAATTTTCTTCCAAATTTTGCAGCATGATGCGAAGAATCAACGCAAAGGACCTTGATAATGAAGCTCTAGCATTCGAACCAGTTTTAGGTTCCATGCTTGCAAGAGTATATCACAACCCTCAAATGAAGGAGGAAAGCCAGTTGAAATTACAGAAGTTGGTACAGTTCTGGGCGTCCAAGGAGATTTATGATCAGAATACTATTAACACACTCGAGGGTGAAATGATTAATGGGATACCAACAAAAGCTTTGCCGGGGCATCCAAAAGAGACACCAGCTTCAGTAGATTCAGCTGCCGGTGGGCCTCTCTCGCATTTTTGTCTCTTATTTTCTCTGTGCATTTGCAGAGTACTATTGTAAGATAATGATGTTTTCAGGTAACATGGCTATAATCTTTGTTAAACTTCTTCTTGGTGCCACGCAGGATTGACGTCGCATACAAATAACCTTACCGTGCACCAGTGGCAATCTGACAGGCAAGGTGCCATTCCAAGTTTTCCCGATCAAGAGCACCCCGATAAGACTGTTCCCGCAGGCCAAACGCTGCCAAGATCCGTGACGCCACAGCAATTTCTACCAAGTGCAATACCCACTGCTGCTTTTGTAAGCTCCATTCCCTTGCCAACTTCTGTACAACCACCAATCCAACAGCCCAATGCCCAATTAATGCCACCACAGCCTGCTGCTGTGGGTGAAAAATTGCCACCATATCCTTTGTTCCCACCTGGTCTTATCCCTGGAATGGTGAGAAAAATGCAGATTGGAAGTGGAGTCCCATATTCTCCCATGAGCCCTTTGGATATCCCAACTATGATTCCTCCATCCAATATATCTCCCTCTGAAGTTCTTGAGAGAGTGTCTAAGTTCTTTAAAGAGATTGGTGAGGTTAATCCCTCAGAAGGACCCATGAGTTCTGATTCCAAAGATGACGATTATGAGTACGATAGAGAACCGCCCGTGCGTAAGGGTGGAGCTTGCATTCCTCCTCCTCCCAACCTTCAGGTTGACCCAGAGACGGGTGCTTATGCTGATGGAAGCGTAGATCGAAAAGGCTCAGGAAGGTTAGGACTCGGAGCATCGGCCAATCCAAACGAGGATAGTCAATATGATGATGTTTATACTTCTTACAGGAAGCAAAGAAGTACCAATTACCACACTTCTATGAGTGCAAGGGCCACAACAAAGTGAAAAGAAACGGATCAATTTATTACTAGGAGTGACCCCATAGTTTGAAACATGTAAGATACCAACTTTTTTCTGTTTACTTCTAAGTTTTGCTGAATTTATTCACCATGCTTAGGTCATTAGCCATCGGACTCGACCCGTTGAATTGTGTATTTAGTTTTGATCTTAAGAATCGTTTTCTAAGCGGATAAGACGACGATATGAAACTAGATTTGTTTCTTTAAGATTGATTCCTCTGGTAAATTGGATAGTGAATTTCGTCCTACAACAGTTGGCTCACTCCATTATTTGTGGAATTTCTCCTTAAATCTGTACTTGATAGAACTCAAAGGCATGTCTTGTTTGGCAAAAGCAGATTCAATGTGACATTTCCTTGTCT

mRNA sequence

TAATGCATCAATTCCCTAGTTCGATTTCAGAGTCGGGACCGGGGCGGATGCGTTTATCGCAGGTTCGCTTGAAGCCCTAAGGATCCATTTCGAAGACCGGAAATTACAGCGGCGACCGGCGCCGAGCTCGTCGGAGTCGTCGTGGAATTGCAAGAACGAAGAGAGAGTGCGAAGCAGCTTGGAGGCTTGTGTGAAAGACGACGCTGAGTGAAGATTTTGTGGAGATTGTTATCCAGCTGATAACTGATATAGAATTATCGATAGCTAATGGATCGGCAGTCTCAAGATTATGCAGCTGCTTCTGCTATGGCTTATGCCCAACAGCAGAGACAGGCAACTAATCTGCAACAGCAGCAGCCATTTGGATTTCATGGCCAACATCAACAATTTCCTCCATCTGTTCCGGGTCCTCCTTTCCTACCGCCGCATCCTGCTATGCAACAGTTCCCTTATCACCACCCTATGCAGCAGCAGCAGCAGCCACAGCCCCACCCGCATCATCCACCCCACCCCCACCTTCTTCATCTTCAACAGCAGCAGCCACCACCAGCTTTTGCTCCGCATTTACCCCCTCCCATGGGTCATTCACCTTTCCATGGTCCCTATGATTCTGCTCCTCCACCAGTTCCACCTCCTTCAGACCCTGAGCTCCAAAAACGGATAGACAAACTTGTGGAGTATATCATAAAGAATGGCCCTGAATTTGAATCCATGATACGTGAAAAGCAACAGGACAACCCAGCATATGGCTTTCTCTTTGGTGGGGAGGGGCACGGTTACTACCGTTATAAGCTTTGGCTAATGACTCGCCCCCACCTTGGAGGACCCTTCAACCCTCCCTTTCCATCTTCATCCATGCCCATGTTGCACCCTCATCCAAATCCTATGACAAGTCCATCTCCCCTTAATGCTCCTCCATTGAATGCTTCTGCATCAATAATTGGGGGTCCTCAAATGCATCAAACTTCTTTTGCTTCTTTCTACGAGCAGCAGCAGCACCATCAACAGGCTTTTGGAGTTCCTGGTCGGTCGGATTACGATCAATCTTCAAAATCTTTTAAAGGGCTTTCTGGACCTCTTCCTTCTGATGTTGCTTTGGAGCTCAACAATGTGCTTAGTAATCTCACTGGTGCTAAAGAATCAATTAAAGGAGCTAAAACTTGGTTCATGCAGCGGTCTCCTTTTGCTCCAGCCANGAGGCGCCAAAAATGGGGTTTTTGGGATTAAGTCAAGCAGCCGCTCTCGCGCCACTCCATTAGGGTTTTAGGGCCATGTCATTTTATCTCTTTTTTTTTTTTTTTTTTTTTTTNGCCATGGCCGAGGCACTTAGAGACATGGTATTTAACATAGATGATTCTGAGAAGCAACTTCATATAATATACCTTGTCAATGACATTCTTTTTGAGAGCATGATGCGAAGAATCAACGCAAAGGACCTTGATAATGAAGCTCTAGCATTCGAACCAGTTTTAGGTTCCATGCTTGCAAGAGTATATCACAACCCTCAAATGAAGGAGGAAAGCCAGTTGAAATTACAGAAGTTGGTACAGTTCTGGGCGTCCAAGGAGATTTATGATCAGAATACTATTAACACACTCGAGGGTGAAATGATTAATGGGATACCAACAAAAGCTTTGCCGGGGCATCCAAAAGAGACACCAGCTTCAGTAGATTCAGCTGCCGGATTGACGTCGCATACAAATAACCTTACCGTGCACCAGTGGCAATCTGACAGGCAAGGTGCCATTCCAAGTTTTCCCGATCAAGAGCACCCCGATAAGACTGTTCCCGCAGGCCAAACGCTGCCAAGATCCGTGACGCCACAGCAATTTCTACCAAGTGCAATACCCACTGCTGCTTTTGTAAGCTCCATTCCCTTGCCAACTTCTGTACAACCACCAATCCAACAGCCCAATGCCCAATTAATGCCACCACAGCCTGCTGCTGTGGGTGAAAAATTGCCACCATATCCTTTGTTCCCACCTGGTCTTATCCCTGGAATGGTGAGAAAAATGCAGATTGGAAGTGGAGTCCCATATTCTCCCATGAGCCCTTTGGATATCCCAACTATGATTCCTCCATCCAATATATCTCCCTCTGAAGTTCTTGAGAGAGTGTCTAAGTTCTTTAAAGAGATTGGTGAGGTTAATCCCTCAGAAGGACCCATGAGTTCTGATTCCAAAGATGACGATTATGAGTACGATAGAGAACCGCCCGTGCGTAAGGGTGGAGCTTGCATTCCTCCTCCTCCCAACCTTCAGGTTGACCCAGAGACGGGTGCTTATGCTGATGGAAGCGTAGATCGAAAAGGCTCAGGAAGGTTAGGACTCGGAGCATCGGCCAATCCAAACGAGGATAGTCAATATGATGATGTTTATACTTCTTACAGGAAGCAAAGAAGTACCAATTACCACACTTCTATGAGTGCAAGGGCCACAACAAAGTGAAAAGAAACGGATCAATTTATTACTAGGAGTGACCCCATAGTTTGAAACATGTAAGATACCAACTTTTTTCTGTTTACTTCTAAGTTTTGCTGAATTTATTCACCATGCTTAGGTCATTAGCCATCGGACTCGACCCGTTGAATTGTGTATTTAGTTTTGATCTTAAGAATCGTTTTCTAAGCGGATAAGACGACGATATGAAACTAGATTTGTTTCTTTAAGATTGATTCCTCTGGTAAATTGGATAGTGAATTTCGTCCTACAACAGTTGGCTCACTCCATTATTTGTGGAATTTCTCCTTAAATCTGTACTTGATAGAACTCAAAGGCATGTCTTGTTTGGCAAAAGCAGATTCAATGTGACATTTCCTTGTCT

Coding sequence (CDS)

ATGTCATTTTATCTCTTTTTTTTTTTTTTTTTTTTTTTNGCCATGGCCGAGGCACTTAGAGACATGGTATTTAACATAGATGATTCTGAGAAGCAACTTCATATAATATACCTTGTCAATGACATTCTTTTTGAGAGCATGATGCGAAGAATCAACGCAAAGGACCTTGATAATGAAGCTCTAGCATTCGAACCAGTTTTAGGTTCCATGCTTGCAAGAGTATATCACAACCCTCAAATGAAGGAGGAAAGCCAGTTGAAATTACAGAAGTTGGTACAGTTCTGGGCGTCCAAGGAGATTTATGATCAGAATACTATTAACACACTCGAGGGTGAAATGATTAATGGGATACCAACAAAAGCTTTGCCGGGGCATCCAAAAGAGACACCAGCTTCAGTAGATTCAGCTGCCGGATTGACGTCGCATACAAATAACCTTACCGTGCACCAGTGGCAATCTGACAGGCAAGGTGCCATTCCAAGTTTTCCCGATCAAGAGCACCCCGATAAGACTGTTCCCGCAGGCCAAACGCTGCCAAGATCCGTGACGCCACAGCAATTTCTACCAAGTGCAATACCCACTGCTGCTTTTGTAAGCTCCATTCCCTTGCCAACTTCTGTACAACCACCAATCCAACAGCCCAATGCCCAATTAATGCCACCACAGCCTGCTGCTGTGGGTGAAAAATTGCCACCATATCCTTTGTTCCCACCTGGTCTTATCCCTGGAATGGTGAGAAAAATGCAGATTGGAAGTGGAGTCCCATATTCTCCCATGAGCCCTTTGGATATCCCAACTATGATTCCTCCATCCAATATATCTCCCTCTGAAGTTCTTGAGAGAGTGTCTAAGTTCTTTAAAGAGATTGGTGAGGTTAATCCCTCAGAAGGACCCATGAGTTCTGATTCCAAAGATGACGATTATGAGTACGATAGAGAACCGCCCGTGCGTAAGGGTGGAGCTTGCATTCCTCCTCCTCCCAACCTTCAGGTTGACCCAGAGACGGGTGCTTATGCTGATGGAAGCGTAGATCGAAAAGGCTCAGGAAGGTTAGGACTCGGAGCATCGGCCAATCCAAACGAGGATAGTCAATATGATGATGTTTATACTTCTTACAGGAAGCAAAGAAGTACCAATTACCACACTTCTATGAGTGCAAGGGCCACAACAAAGTGA

Protein sequence

MSFYLFFFFFFFXAMAEALRDMVFNIDDSEKQLHIIYLVNDILFESMMRRINAKDLDNEALAFEPVLGSMLARVYHNPQMKEESQLKLQKLVQFWASKEIYDQNTINTLEGEMINGIPTKALPGHPKETPASVDSAAGLTSHTNNLTVHQWQSDRQGAIPSFPDQEHPDKTVPAGQTLPRSVTPQQFLPSAIPTAAFVSSIPLPTSVQPPIQQPNAQLMPPQPAAVGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSNISPSEVLERVSKFFKEIGEVNPSEGPMSSDSKDDDYEYDREPPVRKGGACIPPPPNLQVDPETGAYADGSVDRKGSGRLGLGASANPNEDSQYDDVYTSYRKQRSTNYHTSMSARATTK
Homology
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BLAST of Cp4.1LG06g04600 vs. TrEMBL
Match: A0A0A0KSG0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G215110 PE=4 SV=1)

HSP 1 Score: 697.2 bits (1798), Expect = 1.1e-197
Identity = 351/381 (92.13%), Postives = 363/381 (95.28%), Query Frame = 1 

Query: 11  FFXAMAEALRDMVFNIDDSEKQLHIIYLVNDILFESMMRRINAKDLDNEALAFEPVLGSM 70
           F  AMAEALRDM+FNID+SEKQLHIIYLVNDILFESMMRRIN+KDLDNEALAFEPVLGSM
Sbjct: 307 FAPAMAEALRDMIFNIDESEKQLHIIYLVNDILFESMMRRINSKDLDNEALAFEPVLGSM 366

Query: 71  LARVYHNPQMKEESQLKLQKLVQFWASKEIYDQNTINTLEGEMINGIPTKALPGHPKETP 130
           LARVYHNPQMKEESQLKLQKLVQFWASKEIYDQ+TIN LEGEMINGIPTKALPGHPKE  
Sbjct: 367 LARVYHNPQMKEESQLKLQKLVQFWASKEIYDQDTINALEGEMINGIPTKALPGHPKELS 426

Query: 131 ASVDSAAGLTSHTNNLTVHQWQSDRQGAIPSFPDQEHPDKTVPAGQTLPRSVTPQQFLPS 190
           A+VDSAAGLT HTNN  +HQWQ DRQGAIPSFPDQEHPDK V +GQ LPRSVTPQQFLPS
Sbjct: 427 ATVDSAAGLTQHTNNHAMHQWQPDRQGAIPSFPDQEHPDKAVSSGQALPRSVTPQQFLPS 486

Query: 191 AIPTAAFVSSIPLPTSVQPPIQQPNAQLMPPQPAAVGEKLPPYPLFPPGLIPGMVRKMQI 250
            IPTAAFVSSIPLPTSVQPP QQPNAQLMPPQPAAVGEKLPPYPLFPPGLIPGMVRKMQI
Sbjct: 487 TIPTAAFVSSIPLPTSVQPPNQQPNAQLMPPQPAAVGEKLPPYPLFPPGLIPGMVRKMQI 546

Query: 251 GSGVPYSPMSPLDIPTMIPPSNISPSEVLERVSKFFKEIGEVNPSEGPMSSDSKDDDYEY 310
           GSGVPYSPMSPLDIPT+IPPS ISPSEVLERVSKFFKEIGEVNPSEGPM SD KDDD+EY
Sbjct: 547 GSGVPYSPMSPLDIPTVIPPSTISPSEVLERVSKFFKEIGEVNPSEGPMGSDGKDDDFEY 606

Query: 311 DREPPVRKGGACIPPPPNLQVDPETGAYADGSVDRKGSGRLGLGASANPNEDSQYDDVYT 370
           +REPPVRKGGACIPPPPNLQVDPETGAYADGSVDRKGSGRLGLGA+ NPNEDSQYDDVYT
Sbjct: 607 EREPPVRKGGACIPPPPNLQVDPETGAYADGSVDRKGSGRLGLGATTNPNEDSQYDDVYT 666

Query: 371 SYRKQRSTNYHTSMSARATTK 392
           SYRKQRSTNYH+SMSARATTK
Sbjct: 667 SYRKQRSTNYHSSMSARATTK 687

[Close]
BLAST of Cp4.1LG06g04600 vs. TrEMBL
Match: F6H1T4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g00770 PE=4 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 5.7e-141
Identity = 267/389 (68.64%), Postives = 313/389 (80.46%), Query Frame = 1 

Query: 11  FFXAMAEALRDMVFNIDDSEKQLHIIYLVNDILFESMMRRINAKDLDNEALAFEPVLGSM 70
           F  A+AEALRD VF +DDSE+QLHIIYL NDILF+S+ RRIN  +LDNEALAF+PVLGSM
Sbjct: 307 FAPALAEALRDRVFAVDDSERQLHIIYLANDILFDSLQRRINPHELDNEALAFKPVLGSM 366

Query: 71  LARVYHNPQMKEESQLKLQKLVQFWASKEIYDQNTINTLEGEMINGIPTKALPGHPKE-- 130
           LAR+YHNPQ KEE+Q +LQK++QFWASKE+YD +TI  LEGEMI G P+ +  G  KE  
Sbjct: 367 LARIYHNPQNKEENQSRLQKILQFWASKEVYDHDTIYGLEGEMIGGPPSNSFSGPHKELS 426

Query: 131 -TPASVDSAAGLTSHTNNLTVHQWQSDRQGAIPSFPDQEHPDKTVPAGQTLPRSVTPQQF 190
             P    + +GL    ++   H WQ ++  ++PS  +QE PDK +P+   +P S+  QQF
Sbjct: 427 AVPVDPSAVSGLPQSAHHNIPH-WQPEKPCSMPSLLEQEQPDKQMPSLAAMPPSLATQQF 486

Query: 191 LPSAIPTAAFVSSIPLPTSVQPPIQQPNAQLMPPQPAAVGEKLPPYPLFPPGLIPGMVRK 250
           LP+A+P   F+ S+P+P+SVQP  QQP   L  P  A +GEKLPPYPLFPPGLIPGMVRK
Sbjct: 487 LPNAVPAGPFLGSMPIPSSVQPANQQPALHL--PTAAGLGEKLPPYPLFPPGLIPGMVRK 546

Query: 251 MQIGSGVPYSPMSPLDIPTMIPPSNISPSEVLERVSKFFKEIGEVNPSEGPMS-SDSKDD 310
           MQIGSGVPYSPMSPLDIPT+IPPSN+SPSE+LERVSKFFKEIGEVNPSEGPM  SDSKD+
Sbjct: 547 MQIGSGVPYSPMSPLDIPTVIPPSNVSPSEILERVSKFFKEIGEVNPSEGPMEPSDSKDE 606

Query: 311 DYEYDREPPVRKGGACIPPPPNLQVDPETGAYADGSVDRK----GSGRLGLGASANPNED 370
           D EY+R+ PVRKGGACIPPPPNLQVDPETG YADGSV+RK    GS RLGLGA+ANPNE 
Sbjct: 607 DDEYERDSPVRKGGACIPPPPNLQVDPETGTYADGSVERKPGSSGSARLGLGATANPNEV 666

Query: 371 SQYDDVYTSYRKQRSTNYHTSMSARATTK 392
           SQYDDVYTSYRKQRSTNYH+SMSARA T+
Sbjct: 667 SQYDDVYTSYRKQRSTNYHSSMSARAGTR 692

[Close]
BLAST of Cp4.1LG06g04600 vs. TrEMBL
Match: F6H2C9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g05300 PE=4 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 2.4e-139
Identity = 267/391 (68.29%), Postives = 313/391 (80.05%), Query Frame = 1 

Query: 11  FFXAMAEALRDMVFNIDDSEKQLHIIYLVNDILFESMMRRINAKDLDNEALAFEPVLGSM 70
           F  A+AEALRD VF +DDSE+QLHIIYL NDILF+S+ RRIN  +LDNEALAF+PVLGSM
Sbjct: 306 FAPALAEALRDRVFALDDSERQLHIIYLANDILFDSLQRRINPHELDNEALAFKPVLGSM 365

Query: 71  LARVYHNPQMKEESQLKLQKLVQFWASKEIYDQNTINTLEGEMINGIPTKALPGHPKE-- 130
           LAR+YHNPQ KEE+Q +LQK++QFWASKE+YD +TI  LEG+MI G P  +  G  KE  
Sbjct: 366 LARIYHNPQNKEENQSRLQKILQFWASKEVYDHDTIYGLEGDMIGGPPGNSFSGLLKELS 425

Query: 131 -TPASVDSAAGL--TSHTNNLTVHQWQSDRQGAIPSFPDQEHPDKTVPAGQTLPRSVTPQ 190
             PA   + +GL  T+H N   V QWQ D+  ++PS  +QE PDK +P+   +P S+  Q
Sbjct: 426 AVPADPSAVSGLPQTAHHN---VPQWQPDKPSSMPSLLEQEQPDKQMPSLAAMPPSLATQ 485

Query: 191 QFLPSAIPTAAFVSSIPLPTSVQPPIQQPNAQLMPPQPAAVGEKLPPYPLFPPGLIPGMV 250
           QFLP+A+P   F+ S+P+P+SVQP  QQP   L  P    +GEKLPPYPLFPPGLIPGMV
Sbjct: 486 QFLPNAVPAGPFLGSMPIPSSVQPANQQPALHL--PTATGLGEKLPPYPLFPPGLIPGMV 545

Query: 251 RKMQIGSGVPYSPMSPLDIPTMIPPSNISPSEVLERVSKFFKEIGEVNPSEGPMS-SDSK 310
           RKMQIGSGVPYSPMSPLDIPT+IP SN+SPSE+LERVSKFFKEIGEVNPSEGPM  SDSK
Sbjct: 546 RKMQIGSGVPYSPMSPLDIPTVIPLSNVSPSEILERVSKFFKEIGEVNPSEGPMEPSDSK 605

Query: 311 DDDYEYDREPPVRKGGACIPPPPNLQVDPETGAYADGSVDRK----GSGRLGLGASANPN 370
           D+D EY+R+PPVRKGGACIPPPPNLQVDPETG Y+DGSV+RK    GS RLGLGA+ANPN
Sbjct: 606 DEDDEYERDPPVRKGGACIPPPPNLQVDPETGTYSDGSVERKPGSSGSARLGLGATANPN 665

Query: 371 EDSQYDDVYTSYRKQRSTNYHTSMSARATTK 392
           E SQYDDVY+SYRKQRST YH+SMSAR  T+
Sbjct: 666 EVSQYDDVYSSYRKQRSTTYHSSMSARVGTR 691

[Close]
BLAST of Cp4.1LG06g04600 vs. TrEMBL
Match: A0A059B6H7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04509 PE=4 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 1.2e-138
Identity = 263/383 (68.67%), Postives = 312/383 (81.46%), Query Frame = 1 

Query: 11  FFXAMAEALRDMVFNIDDSEKQLHIIYLVNDILFESMMRRINAKDLDNEALAFEPVLGSM 70
           F  A+AEALRD V+ +DDSE+QLHIIYL NDILF+S+ RR+N  +LDNEA+AF+PVLGSM
Sbjct: 301 FAPALAEALRDRVYAMDDSERQLHIIYLANDILFDSLQRRVNPHELDNEAVAFKPVLGSM 360

Query: 71  LARVYHNPQMKEESQLKLQKLVQFWASKEIYDQNTINTLEGEMINGIPTKALPGHPKE-T 130
           LAR+YHNPQ KEE+Q +LQK++QFWASKE++DQ+T+  LEG+MI G+P+ + PG  KE +
Sbjct: 361 LARIYHNPQNKEENQSRLQKILQFWASKEVFDQDTVYGLEGDMIGGVPSGSFPGPSKELS 420

Query: 131 PASVDSAAGLTSHTNNLTVHQWQSDRQGAIPSFPDQEHPDKTVPAGQTLPRSVTPQQFLP 190
            +S DSA+GL   T NL   +WQ +RQ ++   PD++      PA Q+   S+ PQQFLP
Sbjct: 421 MSSKDSASGLPQQTPNLP--RWQQERQSSVSGLPDKD------PALQS---SLAPQQFLP 480

Query: 191 SAIPTAAFVSSIPLPTSVQPPIQQPNAQLMPPQPAAVGEKLPPYPLFPPGLIPGMVRKMQ 250
           +A+P  AF  SIP+P++VQP         +P   A VGEK+PPYPLFPPGLIPGMVRKMQ
Sbjct: 481 NAVPGGAFPGSIPMPSAVQP---------LPASNAHVGEKMPPYPLFPPGLIPGMVRKMQ 540

Query: 251 IGSGVPYSPMSPLDIPTMIPPSNISPSEVLERVSKFFKEIGEVNPSEGPMSSDSKDDDYE 310
           IGSGVPYSPMSPLDIP +IPPS + PSE+LERVSKFFKEIGEVNPSEGPM SDS++DD +
Sbjct: 541 IGSGVPYSPMSPLDIPNVIPPSTVPPSEILERVSKFFKEIGEVNPSEGPMESDSREDDED 600

Query: 311 YDREPPVRKGGACIPPPPNLQVDPETGAYADGSVDRK-GSGRLGLGASANPNEDSQYDDV 370
           Y RE PVRKGGACIPPPPNLQVDPETGAYADGSVDRK GSGRLGLGA+ANPNE SQYDDV
Sbjct: 601 YARELPVRKGGACIPPPPNLQVDPETGAYADGSVDRKSGSGRLGLGATANPNEVSQYDDV 660

Query: 371 YTSYRKQRSTNYHTSMSARATTK 392
           YTSYRKQRSTNYHTSMSARA  +
Sbjct: 661 YTSYRKQRSTNYHTSMSARAAAR 663

[Close]
BLAST of Cp4.1LG06g04600 vs. TrEMBL
Match: U5FJU4_POPTR (SWAP/surp domain-containing family protein OS=Populus trichocarpa GN=POPTR_0018s04080g PE=4 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 1.7e-137
Identity = 263/390 (67.44%), Postives = 308/390 (78.97%), Query Frame = 1 

Query: 11  FFXAMAEALRDMVFNIDDSEKQLHIIYLVNDILFESMMRRINAKDLDNEALAFEPVLGSM 70
           F  A+AEALRD +F++DDSE+QLHIIYL NDILF+S+ RRIN  DLDNEALAF+PVLGSM
Sbjct: 277 FAPALAEALRDRIFSLDDSERQLHIIYLANDILFDSLQRRINPHDLDNEALAFKPVLGSM 336

Query: 71  LARVYHNPQMKEESQLKLQKLVQFWASKEIYDQNTINTLEGEMINGIPTKALPGHPKE-T 130
           LAR+YH PQ K+E+Q +LQK++QFWASKE+YDQ+TI  LEGEM++G P  + PG PKE +
Sbjct: 337 LARIYHYPQNKDENQSRLQKILQFWASKEVYDQDTIYKLEGEMVSGPPVNSFPGPPKELS 396

Query: 131 PASVDS--AAGLTSHTNNLTVHQWQSDRQGAIPSFPDQEHPDKTVPAGQTLP---RSVTP 190
             S DS  AAG T H  +    QW  DRQ    S PDQEH DK     Q LP    ++  
Sbjct: 397 TGSTDSVPAAGFTQHATSHNAPQWPPDRQ----SVPDQEHLDK-----QMLPVMLPTLGN 456

Query: 191 QQFLPSAIPTAAFVSSIPLPTSVQPPIQQPNAQLMPPQPAAVGEKLPPYPLFPPGLIPGM 250
           QQF+P+ +P A F  S+P+ +SV P  QQP   L+   PA + E L PYPLFPPGLIPGM
Sbjct: 457 QQFIPNPVPAATFPGSLPINSSVLPAGQQPAPHLLQAPPANIAENLSPYPLFPPGLIPGM 516

Query: 251 VRKMQIGSGVPYSPMSPLDIPTMIPPSNISPSEVLERVSKFFKEIGEVNPSEGPMSSDSK 310
           VRKMQIGSGVPYSP+SPLDIPT IPPSN+ PSE+L+RVSKFFKEIGEVNPSEGPM +D K
Sbjct: 517 VRKMQIGSGVPYSPLSPLDIPTTIPPSNVPPSEILDRVSKFFKEIGEVNPSEGPMRADPK 576

Query: 311 DDDYEYDREPPVRKGGACIPPPPNLQVDPETGAYADGSVDRK---GSGRLGLGASANPNE 370
           D+D EY+RE P+RKGGACIPPPPNLQV+PETGAYADGSV+RK   GSGRLGLGA+A+PNE
Sbjct: 577 DEDDEYERESPIRKGGACIPPPPNLQVEPETGAYADGSVERKHGTGSGRLGLGATADPNE 636

Query: 371 DSQYDDVYTSYRKQRSTNYHTSMSARATTK 392
            SQYDDVYTSYRKQRSTNYH+SMS RA T+
Sbjct: 637 PSQYDDVYTSYRKQRSTNYHSSMSVRAATR 657

[Close]
BLAST of Cp4.1LG06g04600 vs. TAIR10
Match: AT4G31200.2 (AT4G31200.2 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein)

HSP 1 Score: 431.8 bits (1109), Expect = 4.5e-121
Identity = 236/385 (61.30%), Postives = 279/385 (72.47%), Query Frame = 1 

Query: 11  FFXAMAEALRDMVFNIDDSEKQLHIIYLVNDILFESMMRRINAKDLDNEALAFEPVLGSM 70
           F  A+AEALRD VF +DDS++Q+HI+YL NDILF+S+ RR N  + DNEALAF P+LGSM
Sbjct: 302 FAPALAEALRDRVFAMDDSDRQMHIVYLANDILFDSLQRRTNLHEFDNEALAFRPILGSM 361

Query: 71  LARVYHNPQMKEESQLKLQKLVQFWASKEIYDQNTINTLEGEMINGIPTKALPGHPKETP 130
           L R+YH PQ KEE+Q +L+K++QFWASKE++DQ+TI++LE EM +G P            
Sbjct: 362 LGRIYHFPQNKEENQSRLEKILQFWASKEVFDQDTISSLEKEMKSGPP------------ 421

Query: 131 ASVDSAAGLTSHTNNLTVHQWQSDRQGAIPSFPDQEHPDKTVPAGQTLPRSVTP---QQF 190
                 A   SH+  +  H  Q  R G +     Q+ P+  V +   L     P   QQF
Sbjct: 422 ------ANTFSHSPIIAAHALQ--RPGML-----QQPPNSNVSSTMNLEHLTNPVATQQF 481

Query: 191 LPSAIPTAAFVSSIPLPTSVQPPIQQPNAQLMPPQPAAVGEKLPPYPLFPPGLIPGMVRK 250
           +P+ +P  AF  SIPL  SV PP Q P            GEK PPYPLFPPGLIPGMVRK
Sbjct: 482 IPNVMPPGAFPGSIPLNASVPPPTQPP-----------AGEKPPPYPLFPPGLIPGMVRK 541

Query: 251 MQIGSGVPYSPMSPLDIPTMIPPSNISPSEVLERVSKFFKEIGEVNPSEGPMSSDSKDDD 310
           MQIGSGVPYSP+SPLDIPT+IPPS+   SEVLERVSKFFKEIGEVNPSEGPM S+S+DD 
Sbjct: 542 MQIGSGVPYSPLSPLDIPTVIPPSDTPQSEVLERVSKFFKEIGEVNPSEGPMGSESQDDY 601

Query: 311 YEYDREPPVRKGGACIPPPPNLQVDPETGAYADGSVDRK-GSGRLGLGASANPNEDSQYD 370
             Y+R+ P RKGGACIPPPPNLQVDPETG YADGS D+K GSGRLGLGA+A+PNE +QYD
Sbjct: 602 DNYERDSPQRKGGACIPPPPNLQVDPETGTYADGSTDKKSGSGRLGLGATADPNEPTQYD 650

Query: 371 DVYTSYRKQRSTNYHTSMSARATTK 392
           DVYTSYRK RSTNYHTSMSARATT+
Sbjct: 662 DVYTSYRKHRSTNYHTSMSARATTR 650

[Close]
BLAST of Cp4.1LG06g04600 vs. NCBI nr
Match: gi|449460882|ref|XP_004148173.1| (PREDICTED: calcium homeostasis endoplasmic reticulum protein [Cucumis sativus])

HSP 1 Score: 697.2 bits (1798), Expect = 1.6e-197
Identity = 351/381 (92.13%), Postives = 363/381 (95.28%), Query Frame = 1 

Query: 11  FFXAMAEALRDMVFNIDDSEKQLHIIYLVNDILFESMMRRINAKDLDNEALAFEPVLGSM 70
           F  AMAEALRDM+FNID+SEKQLHIIYLVNDILFESMMRRIN+KDLDNEALAFEPVLGSM
Sbjct: 307 FAPAMAEALRDMIFNIDESEKQLHIIYLVNDILFESMMRRINSKDLDNEALAFEPVLGSM 366

Query: 71  LARVYHNPQMKEESQLKLQKLVQFWASKEIYDQNTINTLEGEMINGIPTKALPGHPKETP 130
           LARVYHNPQMKEESQLKLQKLVQFWASKEIYDQ+TIN LEGEMINGIPTKALPGHPKE  
Sbjct: 367 LARVYHNPQMKEESQLKLQKLVQFWASKEIYDQDTINALEGEMINGIPTKALPGHPKELS 426

Query: 131 ASVDSAAGLTSHTNNLTVHQWQSDRQGAIPSFPDQEHPDKTVPAGQTLPRSVTPQQFLPS 190
           A+VDSAAGLT HTNN  +HQWQ DRQGAIPSFPDQEHPDK V +GQ LPRSVTPQQFLPS
Sbjct: 427 ATVDSAAGLTQHTNNHAMHQWQPDRQGAIPSFPDQEHPDKAVSSGQALPRSVTPQQFLPS 486

Query: 191 AIPTAAFVSSIPLPTSVQPPIQQPNAQLMPPQPAAVGEKLPPYPLFPPGLIPGMVRKMQI 250
            IPTAAFVSSIPLPTSVQPP QQPNAQLMPPQPAAVGEKLPPYPLFPPGLIPGMVRKMQI
Sbjct: 487 TIPTAAFVSSIPLPTSVQPPNQQPNAQLMPPQPAAVGEKLPPYPLFPPGLIPGMVRKMQI 546

Query: 251 GSGVPYSPMSPLDIPTMIPPSNISPSEVLERVSKFFKEIGEVNPSEGPMSSDSKDDDYEY 310
           GSGVPYSPMSPLDIPT+IPPS ISPSEVLERVSKFFKEIGEVNPSEGPM SD KDDD+EY
Sbjct: 547 GSGVPYSPMSPLDIPTVIPPSTISPSEVLERVSKFFKEIGEVNPSEGPMGSDGKDDDFEY 606

Query: 311 DREPPVRKGGACIPPPPNLQVDPETGAYADGSVDRKGSGRLGLGASANPNEDSQYDDVYT 370
           +REPPVRKGGACIPPPPNLQVDPETGAYADGSVDRKGSGRLGLGA+ NPNEDSQYDDVYT
Sbjct: 607 EREPPVRKGGACIPPPPNLQVDPETGAYADGSVDRKGSGRLGLGATTNPNEDSQYDDVYT 666

Query: 371 SYRKQRSTNYHTSMSARATTK 392
           SYRKQRSTNYH+SMSARATTK
Sbjct: 667 SYRKQRSTNYHSSMSARATTK 687

[Close]
BLAST of Cp4.1LG06g04600 vs. NCBI nr
Match: gi|659109679|ref|XP_008454822.1| (PREDICTED: calcium homeostasis endoplasmic reticulum protein-like [Cucumis melo])

HSP 1 Score: 686.4 bits (1770), Expect = 2.9e-194
Identity = 349/386 (90.41%), Postives = 362/386 (93.78%), Query Frame = 1 

Query: 11  FFXAMAEALRDMVFNIDDSEKQLHIIYLVNDILFESMMRRINAKDLDNEALAFEPVLGSM 70
           F  AMAEALRDM+FNIDDSEKQLHIIYLVNDILFESMMRRIN+KDLDNEALAFEPVLGSM
Sbjct: 307 FAPAMAEALRDMIFNIDDSEKQLHIIYLVNDILFESMMRRINSKDLDNEALAFEPVLGSM 366

Query: 71  LARVYHNPQMKEESQLKLQKLVQFWASKEIYDQNTINTLEGEMINGIPTKALPGHPKETP 130
           LARVYHNPQMKEESQLKLQKLVQFWASKEIYDQ+TIN LEGEMINGIPTKALPGHPKE  
Sbjct: 367 LARVYHNPQMKEESQLKLQKLVQFWASKEIYDQDTINALEGEMINGIPTKALPGHPKELS 426

Query: 131 ASVDSAAGLTSHTNNLTVHQWQSDRQGAIPSFPDQEHPDKTVPAGQTLPRSVTPQQFLPS 190
           A+VDSAAGLT HTNN  +HQWQ DRQGAIPSFPDQEHPDK V +GQ LPRSVTPQQFLPS
Sbjct: 427 ATVDSAAGLTQHTNNHAMHQWQPDRQGAIPSFPDQEHPDKAVSSGQALPRSVTPQQFLPS 486

Query: 191 AIPTAAFVSSIPLPTSVQPPIQQPNAQLMPPQPAAVGEKLPPYPLFPPGLIPGMVRKMQI 250
            IPTAAFVSSIPLPTSVQPP QQPNAQLMPPQPAAVGEKLPPYPLFPPGLIPGMVRKMQI
Sbjct: 487 TIPTAAFVSSIPLPTSVQPPNQQPNAQLMPPQPAAVGEKLPPYPLFPPGLIPGMVRKMQI 546

Query: 251 GSGVPYSPMSPLDIPTMIPPSNISPSEVLERVSKFFKEIGEVNPSEGPMSSDSKDDDYEY 310
           GSGVPYSPMSPLDIPT+IPPS ISPSEVLERVSKFFKEIGEVNPSEGPMSSD KD+D+EY
Sbjct: 547 GSGVPYSPMSPLDIPTVIPPSTISPSEVLERVSKFFKEIGEVNPSEGPMSSDGKDEDFEY 606

Query: 311 DREPPVRKGGACIPPPPNLQVDPETGAYADGSVDRKGS-----GRLGLGASANPNEDSQY 370
           +REPPVRKGGACIPPPPNLQVDP+TGAYADGSVDRKGS       LGLGA+ NPNEDSQY
Sbjct: 607 EREPPVRKGGACIPPPPNLQVDPDTGAYADGSVDRKGSXXXXXXXLGLGATTNPNEDSQY 666

Query: 371 DDVYTSYRKQRSTNYHTSMSARATTK 392
           DDVYTSYRKQRSTNYH+SMSARATTK
Sbjct: 667 DDVYTSYRKQRSTNYHSSMSARATTK 692

[Close]
BLAST of Cp4.1LG06g04600 vs. NCBI nr
Match: gi|731410481|ref|XP_010657576.1| (PREDICTED: calcium homeostasis endoplasmic reticulum protein-like isoform X2 [Vitis vinifera])

HSP 1 Score: 508.8 bits (1309), Expect = 8.2e-141
Identity = 267/389 (68.64%), Postives = 313/389 (80.46%), Query Frame = 1 

Query: 11  FFXAMAEALRDMVFNIDDSEKQLHIIYLVNDILFESMMRRINAKDLDNEALAFEPVLGSM 70
           F  A+AEALRD VF +DDSE+QLHIIYL NDILF+S+ RRIN  +LDNEALAF+PVLGSM
Sbjct: 275 FAPALAEALRDRVFAVDDSERQLHIIYLANDILFDSLQRRINPHELDNEALAFKPVLGSM 334

Query: 71  LARVYHNPQMKEESQLKLQKLVQFWASKEIYDQNTINTLEGEMINGIPTKALPGHPKE-- 130
           LAR+YHNPQ KEE+Q +LQK++QFWASKE+YD +TI  LEGEMI G P+ +  G  KE  
Sbjct: 335 LARIYHNPQNKEENQSRLQKILQFWASKEVYDHDTIYGLEGEMIGGPPSNSFSGPHKELS 394

Query: 131 -TPASVDSAAGLTSHTNNLTVHQWQSDRQGAIPSFPDQEHPDKTVPAGQTLPRSVTPQQF 190
             P    + +GL    ++   H WQ ++  ++PS  +QE PDK +P+   +P S+  QQF
Sbjct: 395 AVPVDPSAVSGLPQSAHHNIPH-WQPEKPCSMPSLLEQEQPDKQMPSLAAMPPSLATQQF 454

Query: 191 LPSAIPTAAFVSSIPLPTSVQPPIQQPNAQLMPPQPAAVGEKLPPYPLFPPGLIPGMVRK 250
           LP+A+P   F+ S+P+P+SVQP  QQP   L  P  A +GEKLPPYPLFPPGLIPGMVRK
Sbjct: 455 LPNAVPAGPFLGSMPIPSSVQPANQQPALHL--PTAAGLGEKLPPYPLFPPGLIPGMVRK 514

Query: 251 MQIGSGVPYSPMSPLDIPTMIPPSNISPSEVLERVSKFFKEIGEVNPSEGPMS-SDSKDD 310
           MQIGSGVPYSPMSPLDIPT+IPPSN+SPSE+LERVSKFFKEIGEVNPSEGPM  SDSKD+
Sbjct: 515 MQIGSGVPYSPMSPLDIPTVIPPSNVSPSEILERVSKFFKEIGEVNPSEGPMEPSDSKDE 574

Query: 311 DYEYDREPPVRKGGACIPPPPNLQVDPETGAYADGSVDRK----GSGRLGLGASANPNED 370
           D EY+R+ PVRKGGACIPPPPNLQVDPETG YADGSV+RK    GS RLGLGA+ANPNE 
Sbjct: 575 DDEYERDSPVRKGGACIPPPPNLQVDPETGTYADGSVERKPGSSGSARLGLGATANPNEV 634

Query: 371 SQYDDVYTSYRKQRSTNYHTSMSARATTK 392
           SQYDDVYTSYRKQRSTNYH+SMSARA T+
Sbjct: 635 SQYDDVYTSYRKQRSTNYHSSMSARAGTR 660

[Close]
BLAST of Cp4.1LG06g04600 vs. NCBI nr
Match: gi|731410477|ref|XP_010657574.1| (PREDICTED: calcium homeostasis endoplasmic reticulum protein-like isoform X1 [Vitis vinifera])

HSP 1 Score: 508.8 bits (1309), Expect = 8.2e-141
Identity = 267/389 (68.64%), Postives = 313/389 (80.46%), Query Frame = 1 

Query: 11  FFXAMAEALRDMVFNIDDSEKQLHIIYLVNDILFESMMRRINAKDLDNEALAFEPVLGSM 70
           F  A+AEALRD VF +DDSE+QLHIIYL NDILF+S+ RRIN  +LDNEALAF+PVLGSM
Sbjct: 307 FAPALAEALRDRVFAVDDSERQLHIIYLANDILFDSLQRRINPHELDNEALAFKPVLGSM 366

Query: 71  LARVYHNPQMKEESQLKLQKLVQFWASKEIYDQNTINTLEGEMINGIPTKALPGHPKE-- 130
           LAR+YHNPQ KEE+Q +LQK++QFWASKE+YD +TI  LEGEMI G P+ +  G  KE  
Sbjct: 367 LARIYHNPQNKEENQSRLQKILQFWASKEVYDHDTIYGLEGEMIGGPPSNSFSGPHKELS 426

Query: 131 -TPASVDSAAGLTSHTNNLTVHQWQSDRQGAIPSFPDQEHPDKTVPAGQTLPRSVTPQQF 190
             P    + +GL    ++   H WQ ++  ++PS  +QE PDK +P+   +P S+  QQF
Sbjct: 427 AVPVDPSAVSGLPQSAHHNIPH-WQPEKPCSMPSLLEQEQPDKQMPSLAAMPPSLATQQF 486

Query: 191 LPSAIPTAAFVSSIPLPTSVQPPIQQPNAQLMPPQPAAVGEKLPPYPLFPPGLIPGMVRK 250
           LP+A+P   F+ S+P+P+SVQP  QQP   L  P  A +GEKLPPYPLFPPGLIPGMVRK
Sbjct: 487 LPNAVPAGPFLGSMPIPSSVQPANQQPALHL--PTAAGLGEKLPPYPLFPPGLIPGMVRK 546

Query: 251 MQIGSGVPYSPMSPLDIPTMIPPSNISPSEVLERVSKFFKEIGEVNPSEGPMS-SDSKDD 310
           MQIGSGVPYSPMSPLDIPT+IPPSN+SPSE+LERVSKFFKEIGEVNPSEGPM  SDSKD+
Sbjct: 547 MQIGSGVPYSPMSPLDIPTVIPPSNVSPSEILERVSKFFKEIGEVNPSEGPMEPSDSKDE 606

Query: 311 DYEYDREPPVRKGGACIPPPPNLQVDPETGAYADGSVDRK----GSGRLGLGASANPNED 370
           D EY+R+ PVRKGGACIPPPPNLQVDPETG YADGSV+RK    GS RLGLGA+ANPNE 
Sbjct: 607 DDEYERDSPVRKGGACIPPPPNLQVDPETGTYADGSVERKPGSSGSARLGLGATANPNEV 666

Query: 371 SQYDDVYTSYRKQRSTNYHTSMSARATTK 392
           SQYDDVYTSYRKQRSTNYH+SMSARA T+
Sbjct: 667 SQYDDVYTSYRKQRSTNYHSSMSARAGTR 692

[Close]
BLAST of Cp4.1LG06g04600 vs. NCBI nr
Match: gi|731432620|ref|XP_010644338.1| (PREDICTED: calcium homeostasis endoplasmic reticulum protein-like isoform X2 [Vitis vinifera])

HSP 1 Score: 503.4 bits (1295), Expect = 3.5e-139
Identity = 267/391 (68.29%), Postives = 313/391 (80.05%), Query Frame = 1 

Query: 11  FFXAMAEALRDMVFNIDDSEKQLHIIYLVNDILFESMMRRINAKDLDNEALAFEPVLGSM 70
           F  A+AEALRD VF +DDSE+QLHIIYL NDILF+S+ RRIN  +LDNEALAF+PVLGSM
Sbjct: 274 FAPALAEALRDRVFALDDSERQLHIIYLANDILFDSLQRRINPHELDNEALAFKPVLGSM 333

Query: 71  LARVYHNPQMKEESQLKLQKLVQFWASKEIYDQNTINTLEGEMINGIPTKALPGHPKE-- 130
           LAR+YHNPQ KEE+Q +LQK++QFWASKE+YD +TI  LEG+MI G P  +  G  KE  
Sbjct: 334 LARIYHNPQNKEENQSRLQKILQFWASKEVYDHDTIYGLEGDMIGGPPGNSFSGLLKELS 393

Query: 131 -TPASVDSAAGL--TSHTNNLTVHQWQSDRQGAIPSFPDQEHPDKTVPAGQTLPRSVTPQ 190
             PA   + +GL  T+H N   V QWQ D+  ++PS  +QE PDK +P+   +P S+  Q
Sbjct: 394 AVPADPSAVSGLPQTAHHN---VPQWQPDKPSSMPSLLEQEQPDKQMPSLAAMPPSLATQ 453

Query: 191 QFLPSAIPTAAFVSSIPLPTSVQPPIQQPNAQLMPPQPAAVGEKLPPYPLFPPGLIPGMV 250
           QFLP+A+P   F+ S+P+P+SVQP  QQP   L  P    +GEKLPPYPLFPPGLIPGMV
Sbjct: 454 QFLPNAVPAGPFLGSMPIPSSVQPANQQPALHL--PTATGLGEKLPPYPLFPPGLIPGMV 513

Query: 251 RKMQIGSGVPYSPMSPLDIPTMIPPSNISPSEVLERVSKFFKEIGEVNPSEGPMS-SDSK 310
           RKMQIGSGVPYSPMSPLDIPT+IP SN+SPSE+LERVSKFFKEIGEVNPSEGPM  SDSK
Sbjct: 514 RKMQIGSGVPYSPMSPLDIPTVIPLSNVSPSEILERVSKFFKEIGEVNPSEGPMEPSDSK 573

Query: 311 DDDYEYDREPPVRKGGACIPPPPNLQVDPETGAYADGSVDRK----GSGRLGLGASANPN 370
           D+D EY+R+PPVRKGGACIPPPPNLQVDPETG Y+DGSV+RK    GS RLGLGA+ANPN
Sbjct: 574 DEDDEYERDPPVRKGGACIPPPPNLQVDPETGTYSDGSVERKPGSSGSARLGLGATANPN 633

Query: 371 EDSQYDDVYTSYRKQRSTNYHTSMSARATTK 392
           E SQYDDVY+SYRKQRST YH+SMSAR  T+
Sbjct: 634 EVSQYDDVYSSYRKQRSTTYHSSMSARVGTR 659

The following BLAST results are available for this feature:
BLAST of Cp4.1LG06g04600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG06g04600 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSG0_CUCSA1.1e-19792.13Uncharacterized protein OS=Cucumis sativus GN=Csa_5G215110 PE=4 SV=1[more]
F6H1T4_VITVI5.7e-14168.64Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g00770 PE=4 SV=... [more]
F6H2C9_VITVI2.4e-13968.29Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g05300 PE=4 SV=... [more]
A0A059B6H7_EUCGR1.2e-13868.67Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04509 PE=4 SV=1[more]
U5FJU4_POPTR1.7e-13767.44SWAP/surp domain-containing family protein OS=Populus trichocarpa GN=POPTR_0018s... [more]
BLAST of Cp4.1LG06g04600 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G31200.24.5e-12161.30 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containin... [more]
BLAST of Cp4.1LG06g04600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449460882|ref|XP_004148173.1|1.6e-19792.13PREDICTED: calcium homeostasis endoplasmic reticulum protein [Cucumis sativus][more]
gi|659109679|ref|XP_008454822.1|2.9e-19490.41PREDICTED: calcium homeostasis endoplasmic reticulum protein-like [Cucumis melo][more]
gi|731410481|ref|XP_010657576.1|8.2e-14168.64PREDICTED: calcium homeostasis endoplasmic reticulum protein-like isoform X2 [Vi... [more]
gi|731410477|ref|XP_010657574.1|8.2e-14168.64PREDICTED: calcium homeostasis endoplasmic reticulum protein-like isoform X1 [Vi... [more]
gi|731432620|ref|XP_010644338.1|3.5e-13968.29PREDICTED: calcium homeostasis endoplasmic reticulum protein-like isoform X2 [Vi... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006903RNA_pol_II-bd
IPR006569CID_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006396 RNA processing
biological_process GO:0006874 cellular calcium ion homeostasis
cellular_component GO:0048046 apoplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG06g04600.1Cp4.1LG06g04600.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006569CID domainPROFILEPS51391CIDcoord: 1..117
score: 15
IPR006903RNA polymerase II-binding domainPFAMPF04818CTD_bindcoord: 32..101
score: 9.1
NoneNo IPR availablePANTHERPTHR12323SR-RELATED CTD ASSOCIATED FACTOR 6coord: 11..170
score: 7.8E-134coord: 188..388
score: 7.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG06g04600CmaCh09G005350Cucurbita maxima (Rimu)cmacpeB060
Cp4.1LG06g04600CmaCh01G015820Cucurbita maxima (Rimu)cmacpeB502
Cp4.1LG06g04600CmoCh09G005250Cucurbita moschata (Rifu)cmocpeB034
Cp4.1LG06g04600CmoCh01G016290Cucurbita moschata (Rifu)cmocpeB460
Cp4.1LG06g04600Cla009976Watermelon (97103) v1cpewmB770
Cp4.1LG06g04600Csa3G882920Cucumber (Chinese Long) v2cpecuB776
Cp4.1LG06g04600MELO3C003615Melon (DHL92) v3.5.1cpemeB728
Cp4.1LG06g04600ClCG05G026390Watermelon (Charleston Gray)cpewcgB705
Cp4.1LG06g04600CSPI03G44760Wild cucumber (PI 183967)cpecpiB778
Cp4.1LG06g04600Lsi04G022050Bottle gourd (USVL1VR-Ls)cpelsiB636
Cp4.1LG06g04600Bhi09G002021Wax gourdcpewgoB0988
Cp4.1LG06g04600Carg21182Silver-seed gourdcarcpeB0782
Cp4.1LG06g04600Carg02945Silver-seed gourdcarcpeB0906
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG06g04600Cp4.1LG02g04860Cucurbita pepo (Zucchini)cpecpeB467
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG06g04600Cucurbita pepo (Zucchini)cpecpeB137
Cp4.1LG06g04600Cucurbita pepo (Zucchini)cpecpeB512
Cp4.1LG06g04600Cucumber (Gy14) v1cgycpeB0443
Cp4.1LG06g04600Cucumber (Gy14) v1cgycpeB0828
Cp4.1LG06g04600Cucurbita maxima (Rimu)cmacpeB201
Cp4.1LG06g04600Cucurbita maxima (Rimu)cmacpeB788
Cp4.1LG06g04600Cucurbita moschata (Rifu)cmocpeB173
Cp4.1LG06g04600Cucurbita moschata (Rifu)cmocpeB741
Cp4.1LG06g04600Wild cucumber (PI 183967)cpecpiB775
Cp4.1LG06g04600Cucumber (Chinese Long) v2cpecuB773
Cp4.1LG06g04600Bottle gourd (USVL1VR-Ls)cpelsiB652
Cp4.1LG06g04600Watermelon (Charleston Gray)cpewcgB714
Cp4.1LG06g04600Watermelon (97103) v1cpewmB761
Cp4.1LG06g04600Melon (DHL92) v3.5.1cpemeB719
Cp4.1LG06g04600Cucumber (Gy14) v2cgybcpeB255
Cp4.1LG06g04600Cucumber (Gy14) v2cgybcpeB436
Cp4.1LG06g04600Melon (DHL92) v3.6.1cpemedB854
Cp4.1LG06g04600Melon (DHL92) v3.6.1cpemedB861
Cp4.1LG06g04600Silver-seed gourdcarcpeB0086
Cp4.1LG06g04600Silver-seed gourdcarcpeB1366
Cp4.1LG06g04600Cucumber (Chinese Long) v3cpecucB0959
Cp4.1LG06g04600Cucumber (Chinese Long) v3cpecucB0964
Cp4.1LG06g04600Wax gourdcpewgoB0977