Cp4.1LG06g01240 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG06g01240
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDNA-3-methyladenine glycosylase, putative
LocationCp4.1LG06 : 616800 .. 618962 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGTTGTCTCTGGAAAATTCGACGTTCGTTGCCGAGCTTTCTTTGTTTTGTTCCACACAGAATTCGATTCTGGAAGGGATTTTCGTTGACGGATATCTTTCACGAGCAATGTCTGTGGCTACGAAGCTCCATTCGCACGCTAAACCTGTTTTGGAGTCCCGAGAAATTCTTGGACCCGGCGGGAACAGAGATAGGGCGCCTGAGAAGCCGAAATGTAAACAGGAGACTTTGAAGAACTCAGAGAAGCAGAACAAGGCGCTTCCGGCGATTCCTGAATCGGTTATTCGAGACAATAGCTCCATCGGGAGCTCCTGCTCATCCGATTCTTTATTAAGCAGCTATTCGACCAAATTGTTGAATCCGAAAGTGAAGCCCTGCGATGTGAAGCCTGTGAAGGCTGTTGCTGCCGGAGGTGATCCAAACGTAACCTCAACGACGCCTAGTCTCTCGGTTCCGGGGAAACGCTGTGGTTGGATAACGCCTTATTCTGGTAAGCAAGCTCAAACTCTGCTTATTATTGACTATTGCTTATTTGAATCGAGGAAACAATGGATATGAGATGGACAGAAGACAATCGCACAATTTCAATTCGACATAATAATAGAGTTTATCTTAGTTCAATACTCATTTTCTACTTGCATTGAAATATTTTGATTATTGTATTGTAATGCAATCAAATATTTAACCTCTTCATATTTTATTGTTGCATGAAGGATTTTACTTACTATGTTATTTGAACATTACAATTCATTATTATATGTGAATTTAACTATTTTTAAAAATCAGTTACATTCACATGGATTATGAATCTCTGGTTATCCTGTAATGTATTGTGATGGTTTCTTGTTGTAGACCCACTTTACATCGCTTTCCATGACGAAGAATGGGGAGTCCCAGTTCATGACGACAGGAAGCTGTTTGAGTTACTTGTATTATCACAAGCCTTAGCAGAGCTTACTTGGCCCTTGATTCTTTGCAAGAGAGATATATTTAGGTCTCTTCATTTTTTCCCAAAACTTGAATACAAATCAGTCCCTAAAAGAACATTGTTCTAAATTGTCTTCCATTTCTCTCTTCTTTGCAGGAAAGTTTTTAATGATTTTGACCCATCTACCATCGCTAAGTTCACACAGAATGAGTTTACGACACTAAAAGAAAATGGCATCCAGCTCCTATCTGAACCAAAGCTTCGTGCAATCGTGGAGAACGCTAATCAAGTACTCAAGGTATTGAGTTTTGGTTAAGCTTTAGCACTTCCTATTTTTTGTTAAGCCAAAGCCAACCCACAAGAACAGGCGTTTGGTTGTCTCAACTTCCATCCCTTTCAAGCGGTTGAAAGCTGAATCTCTACGTTTCCATTGCCTTTTGACTTCTCCACAGATTCAACAGGAATTTGGTACCTTCAGCAACTATTGTTGGAGCTTTGTCAACAAGAAGCCTATAACAAACAGATTTCGATATGCCCGTCAAGTACCGGTAAAGACGCCGAAAGCAGAGTTCATGAGCAAGGATTTGCTAAGAAGAGGCTTTCGTTGTGTTGGGCCAACTGTGGTTTATTCCTTCATGCAGGTTACCGGAATTGTTAACGATCACTTAGTCAATTGCTTCAGATATCAAGAGTGCGATGGTATGAAATTAAGAGTAGAAGGTCAGCGATCGGAGTTGCTCACCGGAGCTTTGGAGACTAGATCTTGACATGTTCATAGAAAAAAAAAAAAGGTTATCTCTAACTAATCTTAGAAATCAGTGTGATAAAATGGTTCTGATGATCTGATGCTGAGTAGTTTAAATTCTCCTTTGTTTAGAATTCTTAATTGTAATTTGTATTTACAGACGACAAAAACATGTTGGCTTCCTGTAACTATTTTTCAACCTTCAGAACACGCTTCGGTGGCAGAGCATAAGAACAATGGTATGTTTCTCTTACTCCAACATTTATAACGTTAGTAGTTTCCGTAAGATTTAAGGTTACGAGTCGCAGAATTCCAGGGTCGAATTCGAATATTCGGACTCATTAGGCCTTAAGTCTCCTTGCAAAATTTAGCCCAATAGAAATGTGGGCCCAAGTTCCCGGGAAGGCCCAATGATTTCGTAGCCGTCGCAATTCCTCCTGCTTGAAACCCAACAAATAATTCATAAAAATTAACCAATAAAGCAATAAAA

mRNA sequence

GTGTTGTCTCTGGAAAATTCGACGTTCGTTGCCGAGCTTTCTTTGTTTTGTTCCACACAGAATTCGATTCTGGAAGGGATTTTCGTTGACGGATATCTTTCACGAGCAATGTCTGTGGCTACGAAGCTCCATTCGCACGCTAAACCTGTTTTGGAGTCCCGAGAAATTCTTGGACCCGGCGGGAACAGAGATAGGGCGCCTGAGAAGCCGAAATGTAAACAGGAGACTTTGAAGAACTCAGAGAAGCAGAACAAGGCGCTTCCGGCGATTCCTGAATCGGTTATTCGAGACAATAGCTCCATCGGGAGCTCCTGCTCATCCGATTCTTTATTAAGCAGCTATTCGACCAAATTGTTGAATCCGAAAGTGAAGCCCTGCGATGTGAAGCCTGTGAAGGCTGTTGCTGCCGGAGGTGATCCAAACGTAACCTCAACGACGCCTAGTCTCTCGGTTCCGGGGAAACGCTGTGGTTGGATAACGCCTTATTCTGACCCACTTTACATCGCTTTCCATGACGAAGAATGGGGAGTCCCAGTTCATGACGACAGGAAGCTGTTTGAGTTACTTGTATTATCACAAGCCTTAGCAGAGCTTACTTGGCCCTTGATTCTTTGCAAGAGAGATATATTTAGGAAAGTTTTTAATGATTTTGACCCATCTACCATCGCTAAGTTCACACAGAATGAGTTTACGACACTAAAAGAAAATGGCATCCAGCTCCTATCTGAACCAAAGCTTCGTGCAATCGTGGAGAACGCTAATCAAGTACTCAAGATTCAACAGGAATTTGGTACCTTCAGCAACTATTGTTGGAGCTTTGTCAACAAGAAGCCTATAACAAACAGATTTCGATATGCCCGTCAAGTACCGGTAAAGACGCCGAAAGCAGAGTTCATGAGCAAGGATTTGCTAAGAAGAGGCTTTCGTTGTGTTGGGCCAACTGTGGTTTATTCCTTCATGCAGGTTACCGGAATTGTTAACGATCACTTAGTCAATTGCTTCAGATATCAAGAGTGCGATGGTATGAAATTAAGAGTAGAAGGTCAGCGATCGGAGTTGCTCACCGGAGCTTTGGAGACTAGATCTTGACATGTTCATAGAAAAAAAAAAAAGACGACAAAAACATGTTGGCTTCCTGTAACTATTTTTCAACCTTCAGAACACGCTTCGGTGGCAGAGCATAAGAACAATGGTATGTTTCTCTTACTCCAACATTTATAACGTTAGTAGTTTCCGTAAGATTTAAGGTTACGAGTCGCAGAATTCCAGGGTCGAATTCGAATATTCGGACTCATTAGGCCTTAAGTCTCCTTGCAAAATTTAGCCCAATAGAAATGTGGGCCCAAGTTCCCGGGAAGGCCCAATGATTTCGTAGCCGTCGCAATTCCTCCTGCTTGAAACCCAACAAATAATTCATAAAAATTAACCAATAAAGCAATAAAA

Coding sequence (CDS)

GTGTTGTCTCTGGAAAATTCGACGTTCGTTGCCGAGCTTTCTTTGTTTTGTTCCACACAGAATTCGATTCTGGAAGGGATTTTCGTTGACGGATATCTTTCACGAGCAATGTCTGTGGCTACGAAGCTCCATTCGCACGCTAAACCTGTTTTGGAGTCCCGAGAAATTCTTGGACCCGGCGGGAACAGAGATAGGGCGCCTGAGAAGCCGAAATGTAAACAGGAGACTTTGAAGAACTCAGAGAAGCAGAACAAGGCGCTTCCGGCGATTCCTGAATCGGTTATTCGAGACAATAGCTCCATCGGGAGCTCCTGCTCATCCGATTCTTTATTAAGCAGCTATTCGACCAAATTGTTGAATCCGAAAGTGAAGCCCTGCGATGTGAAGCCTGTGAAGGCTGTTGCTGCCGGAGGTGATCCAAACGTAACCTCAACGACGCCTAGTCTCTCGGTTCCGGGGAAACGCTGTGGTTGGATAACGCCTTATTCTGACCCACTTTACATCGCTTTCCATGACGAAGAATGGGGAGTCCCAGTTCATGACGACAGGAAGCTGTTTGAGTTACTTGTATTATCACAAGCCTTAGCAGAGCTTACTTGGCCCTTGATTCTTTGCAAGAGAGATATATTTAGGAAAGTTTTTAATGATTTTGACCCATCTACCATCGCTAAGTTCACACAGAATGAGTTTACGACACTAAAAGAAAATGGCATCCAGCTCCTATCTGAACCAAAGCTTCGTGCAATCGTGGAGAACGCTAATCAAGTACTCAAGATTCAACAGGAATTTGGTACCTTCAGCAACTATTGTTGGAGCTTTGTCAACAAGAAGCCTATAACAAACAGATTTCGATATGCCCGTCAAGTACCGGTAAAGACGCCGAAAGCAGAGTTCATGAGCAAGGATTTGCTAAGAAGAGGCTTTCGTTGTGTTGGGCCAACTGTGGTTTATTCCTTCATGCAGGTTACCGGAATTGTTAACGATCACTTAGTCAATTGCTTCAGATATCAAGAGTGCGATGGTATGAAATTAAGAGTAGAAGGTCAGCGATCGGAGTTGCTCACCGGAGCTTTGGAGACTAGATCTTGA

Protein sequence

VLSLENSTFVAELSLFCSTQNSILEGIFVDGYLSRAMSVATKLHSHAKPVLESREILGPGGNRDRAPEKPKCKQETLKNSEKQNKALPAIPESVIRDNSSIGSSCSSDSLLSSYSTKLLNPKVKPCDVKPVKAVAAGGDPNVTSTTPSLSVPGKRCGWITPYSDPLYIAFHDEEWGVPVHDDRKLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAKFTQNEFTTLKENGIQLLSEPKLRAIVENANQVLKIQQEFGTFSNYCWSFVNKKPITNRFRYARQVPVKTPKAEFMSKDLLRRGFRCVGPTVVYSFMQVTGIVNDHLVNCFRYQECDGMKLRVEGQRSELLTGALETRS
Homology
[Close]
BLAST of Cp4.1LG06g01240 vs. Swiss-Prot
Match: GUAA_HELHP (Probable GMP synthase [glutamine-hydrolyzing] OS=Helicobacter hepaticus (strain ATCC 51449 / 3B1) GN=guaA PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.1e-41
Identity = 81/192 (42.19%), Postives = 115/192 (59.90%), Query Frame = 1 

Query: 155 RCGWITPYSDP---LYIAFHDEEWGVPVHDDRKLFELLVLSQALAELTWPLILCKRDIFR 214
           RC W T   +    LY  +HD EWG P+H+D+KLFE LVL    A L+W  IL KR+ FR
Sbjct: 787 RCAWATDKDEAARKLYEDYHDTEWGEPLHEDKKLFEHLVLEGFQAGLSWITILKKREAFR 846

Query: 215 KVFNDFDPSTIAKFTQNEFTTLKENGIQLLSEPKLRAIVENANQVLKIQQEFGTFSNYCW 274
             F+DFDP  +A + +++   L  N   + +  K+ A + NA   + +Q+EFG+F  Y W
Sbjct: 847 VAFDDFDPHIVANYDEDKIKELMRNEGIIRNRAKIEAAIINAKAFMAVQREFGSFDKYIW 906

Query: 275 SFVNKKPITNRFRYARQVPVKTPKAEFMSKDLLRRGFRCVGPTVVYSFMQVTGIVNDHLV 334
            FV  KPI N F     +P  TP ++ ++KDL +RGF+ VG T +Y+ MQ  G+VNDHL 
Sbjct: 907 GFVGGKPIINAFESIADLPASTPLSDKIAKDLKKRGFKFVGTTTMYAMMQSIGMVNDHLT 966

Query: 335 NCFRYQECDGMK 344
           +CF+     GM+
Sbjct: 967 SCFKCNSSLGMQ 978

[Close]
BLAST of Cp4.1LG06g01240 vs. Swiss-Prot
Match: 3MG1_ECOLI (DNA-3-methyladenine glycosylase 1 OS=Escherichia coli (strain K12) GN=tag PE=1 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.4e-38
Identity = 74/183 (40.44%), Postives = 112/183 (61.20%), Query Frame = 1 

Query: 154 KRCGWITPYSDPLYIAFHDEEWGVPVHDDRKLFELLVLSQALAELTWPLILCKRDIFRKV 213
           +RCGW++   DPLYIA+HD EWGVP  D +KLFE++ L    A L+W  +L KR+ +R  
Sbjct: 2   ERCGWVS--QDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRAC 61

Query: 214 FNDFDPSTIAKFTQNEFTTLKENGIQLLSEPKLRAIVENANQVLKIQQEFGTFSNYCWSF 273
           F+ FDP  +A   + +   L ++   +    K++AI+ NA   L+++Q    F ++ WSF
Sbjct: 62  FHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAYLQMEQNGEPFVDFVWSF 121

Query: 274 VNKKPITNRFRYARQVPVKTPKAEFMSKDLLRRGFRCVGPTVVYSFMQVTGIVNDHLVNC 333
           VN +P   +     ++P  T  ++ +SK L +RGF+ VG T+ YSFMQ  G+VNDH+V C
Sbjct: 122 VNHQPQVTQATTLSEIPTSTSASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVGC 181

Query: 334 FRY 337
             Y
Sbjct: 182 CCY 182

[Close]
BLAST of Cp4.1LG06g01240 vs. Swiss-Prot
Match: 3MGA_HAEIN (DNA-3-methyladenine glycosylase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=tag PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.5e-35
Identity = 76/179 (42.46%), Postives = 106/179 (59.22%), Query Frame = 1 

Query: 155 RCGWITPYSDPLYIAFHDEEWGVPVHDDRKLFELLVLSQALAELTWPLILCKRDIFRKVF 214
           RC W+   S  +YI +HD+EWG P  D +KLFE + L    A L+W  +L KR+ +R+ F
Sbjct: 4   RCPWVGEQS--IYIDYHDKEWGKPEFDSQKLFEKICLEGQQAGLSWITVLKKRESYREAF 63

Query: 215 NDFDPSTIAKFTQNEFTTLKENGIQLLSEPKLRAIVENANQVLKIQQEFGTFSNYCWSFV 274
           + FDP  IAK T  +     +N   +    KL AIV+NA   L +++    FS++ WSFV
Sbjct: 64  HQFDPKKIAKMTALDIDACMQNSGLIRHRAKLEAIVKNAKAYLAMEKCGENFSDFIWSFV 123

Query: 275 NKKPITNRFRYARQVPVKTPKAEFMSKDLLRRGFRCVGPTVVYSFMQVTGIVNDHLVNC 334
           N KPI N     R VP KT  ++ +SK L +RGF  +G T  Y+FMQ  G+V+DHL +C
Sbjct: 124 NHKPIVNDVPDLRSVPTKTEVSKALSKALKKRGFVFIGETTCYAFMQSMGLVDDHLNDC 180

[Close]
BLAST of Cp4.1LG06g01240 vs. TrEMBL
Match: A0A0A0LG22_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G855280 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 6.9e-141
Identity = 252/319 (79.00%), Postives = 277/319 (86.83%), Query Frame = 1 

Query: 37  MSVATKLHSHAKPVLESREILGPGGNRDRAPEKPKCKQETLKNSEKQNKALPAIPESVIR 96
           MSVATKL SH KP LE R ILGPGGNRDRAP+ PKCK ETLK +EKQ+KALPAI ESVIR
Sbjct: 1   MSVATKLQSHVKPALEPRAILGPGGNRDRAPQNPKCKPETLKKTEKQSKALPAISESVIR 60

Query: 97  DNSSIGSSCSSDSLLSSYSTKLLNPKVKPCDVKPVKAVAAGGDPNVTSTTPSLSVPGKRC 156
           DN S+GSSCSSDSL S+YS KLL P         VK V+AGGD N T+T+P+LS+PGKRC
Sbjct: 61  DNVSVGSSCSSDSLSSNYSAKLLKPYA-------VKPVSAGGDSNATTTSPALSLPGKRC 120

Query: 157 GWITPYSDPLYIAFHDEEWGVPVHDDRKLFELLVLSQALAELTWPLILCKRDIFRKVFND 216
            WIT +SDPLYIAFHDEEWGVP+HDD+KLFELLVLSQALAELTWPLIL KRD+FRKV ND
Sbjct: 121 DWITLHSDPLYIAFHDEEWGVPIHDDKKLFELLVLSQALAELTWPLILSKRDVFRKVLND 180

Query: 217 FDPSTIAKFTQNEFTTLKENGIQLLSEPKLRAIVENANQVLKIQQEFGTFSNYCWSFVNK 276
           FDPS+IA+FT+NEFTTLK NGIQLLSEPKLRAIV+NANQVLKIQ+EFG+FSNYCWSFVNK
Sbjct: 181 FDPSSIAQFTENEFTTLKVNGIQLLSEPKLRAIVDNANQVLKIQKEFGSFSNYCWSFVNK 240

Query: 277 KPITNRFRYARQVPVKTPKAEFMSKDLLRRGFRCVGPTVVYSFMQVTGIVNDHLVNCFRY 336
           KPI NR RY RQVPVKTPKAEFMSKD++RRGFRCVGPTVVYSFMQV GIVNDHLV+CFRY
Sbjct: 241 KPIRNRHRYNRQVPVKTPKAEFMSKDMIRRGFRCVGPTVVYSFMQVAGIVNDHLVSCFRY 300

Query: 337 QEC-----DGMKLRVEGQR 351
           +EC     D  KLRVE +R
Sbjct: 301 EECDPKVKDDKKLRVEDKR 312

[Close]
BLAST of Cp4.1LG06g01240 vs. TrEMBL
Match: W9RT44_9ROSA (Putative Glutamine amidotransferase OS=Morus notabilis GN=L484_021208 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 1.5e-106
Identity = 207/338 (61.24%), Postives = 244/338 (72.19%), Query Frame = 1 

Query: 37  MSVATKLHSHAKPVLESREILGPGGNRDRAPEKPKCKQETLKNSEKQNKALPA----IPE 96
           MSVATKLHS   PV E R ILGPGGNR R  E PK K E LK  + Q    P     +P+
Sbjct: 1   MSVATKLHS---PVCEPRAILGPGGNRVRVSEYPKRKGEALKKPQAQRTRKPTAVSEVPQ 60

Query: 97  SVIRDNSSIGSSCSSDS-----LLSSYSTKLLNPKVKPCDVKPVKAVAAGGDPNVTSTTP 156
           SV+R N S+ SSCSSDS     L  + S+K   P VK   +KPVK V  G +    +  P
Sbjct: 61  SVVRSNGSVDSSCSSDSSSSGSLAKTVSSKKTPPTVKRKGLKPVKVVPVGVE--AVAALP 120

Query: 157 SLSVPGKRCGWITPYSDPLYIAFHDEEWGVPVHDDRKLFELLVLSQALAELTWPLILCKR 216
            +  P KRC WITP SD +Y +FHDEEWGVP+HDDRKLFELLV SQALAELTWP IL KR
Sbjct: 121 KILGPPKRCDWITPNSDSIYTSFHDEEWGVPIHDDRKLFELLVFSQALAELTWPAILNKR 180

Query: 217 DIFRKVFNDFDPSTIAKFTQNEFTTLKENGIQLLSEPKLRAIVENANQVLKIQQEFGTFS 276
           +IFRK+F +FDPS+IA+F + +  +LK NG  LLSEPKLRAIVENA Q+LKIQQEFG+FS
Sbjct: 181 EIFRKLFENFDPSSIAQFNEKKLLSLKVNGNLLLSEPKLRAIVENAKQILKIQQEFGSFS 240

Query: 277 NYCWSFVNKKPITNRFRYARQVPVKTPKAEFMSKDLLRRGFRCVGPTVVYSFMQVTGIVN 336
           NYCWSFVN KPI N FRY RQVPVK+PKA+ +SKD+++RGFRCVGPTV+YSFMQV GIVN
Sbjct: 241 NYCWSFVNDKPIKNGFRYGRQVPVKSPKADLISKDMMQRGFRCVGPTVIYSFMQVAGIVN 300

Query: 337 DHLVNCFRYQECD---GMKLRVEGQRSELLTGALETRS 363
           DHL++CFRY+EC       L+   + S +LT ALE  S
Sbjct: 301 DHLLSCFRYEECKINVEKDLKPRTEESAILTEALEKTS 333

[Close]
BLAST of Cp4.1LG06g01240 vs. TrEMBL
Match: A5BIS5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033233 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 1.6e-105
Identity = 203/339 (59.88%), Postives = 248/339 (73.16%), Query Frame = 1 

Query: 37  MSVATKLHSHAKPVLESREILGPGGNRDRAPEKPKCKQETLKNSEKQNKALPAIPESVIR 96
           MSVATKL S AKP+ E R +LGPGGNR R  E+ KCK+E LK  ++  K    +PE+VIR
Sbjct: 1   MSVATKLQSPAKPLSEGRVVLGPGGNRFRVSEEAKCKKEGLKKPQQHRKQSSEVPEAVIR 60

Query: 97  DNSSIGSSCSSDSLLSSYSTKLLNPK--VKPCDVKPVKAVAAGGDPNVTSTTPSLSVPGK 156
           +N S  SSCSSDS  S  S K++N +  VK   +KPVK V  G           + VP K
Sbjct: 61  NNLSFESSCSSDSSSSGSSVKMVNSRGRVKRNGLKPVKVVPHG-----------VEVPAK 120

Query: 157 RCGWITPYSDPLYIAFHDEEWGVPVHDDRKLFELLVLSQALAELTWPLILCKRDIFRKVF 216
           RC WITP SDPLY +FHDEEWGVPVHDD+KLFELLVLSQALAEL+WP IL KRDIFRK+F
Sbjct: 121 RCDWITPNSDPLYTSFHDEEWGVPVHDDKKLFELLVLSQALAELSWPTILNKRDIFRKLF 180

Query: 217 NDFDPSTIAKFTQNEFTTLKENGIQLLSEPKLRAIVENANQVLKI----------QQEFG 276
           ++FDPS+IAKFT  +  +LK +G  LLSEPKLRA++ENANQ+LK+           QEFG
Sbjct: 181 DNFDPSSIAKFTDKKLLSLKASGGTLLSEPKLRAVIENANQMLKVIKFITRCLWFSQEFG 240

Query: 277 TFSNYCWSFVNKKPITNRFRYARQVPVKTP-KAEFMSKDLLRRGFRCVGPTVVYSFMQVT 336
           +FSNYCWSF+N KP+ N FRYARQVPVKT  +   +SKDL++RGFRCVGPTV+YSFMQV 
Sbjct: 241 SFSNYCWSFINHKPMKNGFRYARQVPVKTQNQNNIISKDLMQRGFRCVGPTVIYSFMQVA 300

Query: 337 GIVNDHLVNCFRYQECDG---MKLRVEGQRSELLTGALE 360
           G+VNDHL+ CFR+QEC+      L+ + + +E+LT ALE
Sbjct: 301 GLVNDHLLTCFRFQECNSNIKKDLQAKTEETEVLTNALE 328

[Close]
BLAST of Cp4.1LG06g01240 vs. TrEMBL
Match: A0A061FDE4_THECC (DNA-3-methyladenine glycosylase, putative OS=Theobroma cacao GN=TCM_033995 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 2.8e-105
Identity = 199/307 (64.82%), Postives = 234/307 (76.22%), Query Frame = 1 

Query: 37  MSVATKLHSHAKPVLESREILGPGGNRDRAPEKPKCKQETLKNSEKQNKALPAIPESVIR 96
           MSVATKL S   PV E R ILGP GNR R  ++ K K E  K  ++    +   P+SV++
Sbjct: 1   MSVATKLKSSPTPVTEPRAILGPTGNRVRVSDESKRKPEAQKKPQRPKFRVSKSPQSVVQ 60

Query: 97  DNSSIGSSCSSDSLLSSYSTKLLNPK--VKPCDVKPVKA-VAAGGDPNVTSTTPSLSVPG 156
            N S+ SSCSSDS  S+ S K ++ K  VK   VKPVKA VA   D  V   +P L  P 
Sbjct: 61  SNVSVDSSCSSDSSSSNSSVKTVSSKKTVKRIGVKPVKAKVAPTADEVVAEPSPVLPEPL 120

Query: 157 KRCGWITPYSDPLYIAFHDEEWGVPVHDDRKLFELLVLSQALAELTWPLILCKRDIFRKV 216
           KRC WITP+SDPLY + HD+EWGVPVHDDRKLFELLV SQALAEL+WP IL KRDIFRK+
Sbjct: 121 KRCDWITPFSDPLYTSLHDKEWGVPVHDDRKLFELLVFSQALAELSWPTILNKRDIFRKL 180

Query: 217 FNDFDPSTIAKFTQNEFTTLKENGIQLLSEPKLRAIVENANQVLKIQQEFGTFSNYCWSF 276
           F++FDPS+IA+FT+ +  +LK NG  LLSEPKLRA+VENA Q+LK+QQEFG+FS+YCW F
Sbjct: 181 FDNFDPSSIAQFTEKKLLSLKVNGSLLLSEPKLRAVVENAKQMLKVQQEFGSFSSYCWGF 240

Query: 277 VNKKPITNRFRYARQVPVKTPKAEFMSKDLLRRGFRCVGPTVVYSFMQVTGIVNDHLVNC 336
           VN KPI N FRY RQVPVKTPKAE +SKD+++RGFRCVGPTVVYSFMQV GIVNDHLV C
Sbjct: 241 VNHKPIRNGFRYVRQVPVKTPKAELISKDMMQRGFRCVGPTVVYSFMQVAGIVNDHLVTC 300

Query: 337 FRYQECD 341
           FRYQEC+
Sbjct: 301 FRYQECN 307

[Close]
BLAST of Cp4.1LG06g01240 vs. TrEMBL
Match: F6H1G2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g12030 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 8.9e-104
Identity = 199/329 (60.49%), Postives = 242/329 (73.56%), Query Frame = 1 

Query: 36  AMSVATKLHSHAKPVLESREILGPGGNRDRAPEKPKCKQETLKNSEKQNKALPAIPESVI 95
           AMSVATKL S AKP+ E R +LGPGGNR R  E+ K K+E LK  ++  K    +PE+V+
Sbjct: 2   AMSVATKLQSPAKPLSEGRVVLGPGGNRFRVSEEAKRKKEGLKKPQQHRKQSSEVPEAVV 61

Query: 96  RDNSSIGSSCSSDSLLSSYSTKLLNPK--VKPCDVKPVKAVAAGGDPNVTSTTPSLSVPG 155
           R+N S  SSCSSDS  S  S K++N +  VK   +KPVK V  G           + VP 
Sbjct: 62  RNNLSFESSCSSDSSSSGSSVKMVNSRGRVKRNGLKPVKVVPHG-----------VEVPA 121

Query: 156 KRCGWITPYSDPLYIAFHDEEWGVPVHDDRKLFELLVLSQALAELTWPLILCKRDIFRKV 215
           KRC WITP SDPLY +FHDEEWGVPVHDD+KLFELLVLSQALAEL+WP IL KRDIFRK+
Sbjct: 122 KRCDWITPNSDPLYTSFHDEEWGVPVHDDKKLFELLVLSQALAELSWPTILNKRDIFRKL 181

Query: 216 FNDFDPSTIAKFTQNEFTTLKENGIQLLSEPKLRAIVENANQVLKIQQEFGTFSNYCWSF 275
           F++FDPS+IAKFT  +  +LK +G  LLSEPKLRA++ENANQ+LK+QQEFG+FSNYCWSF
Sbjct: 182 FDNFDPSSIAKFTDKKLLSLKASGGTLLSEPKLRAVIENANQMLKVQQEFGSFSNYCWSF 241

Query: 276 VNKKPITNRFRYARQVPVKTPKAEFMSKDLLRRGFRCVGPTVVYSFMQVTGIVNDHLVNC 335
           +N KP+ N FRYARQVPVKT           +RGFRCVGPTV+YSFMQV G+VNDHL+ C
Sbjct: 242 INHKPMKNGFRYARQVPVKT-----------QRGFRCVGPTVIYSFMQVAGLVNDHLLTC 301

Query: 336 FRYQECDG---MKLRVEGQRSELLTGALE 360
           FR+QEC+      L+ + + +E+LT ALE
Sbjct: 302 FRFQECNSNIKKDLQAKTEETEVLTNALE 308

[Close]
BLAST of Cp4.1LG06g01240 vs. TAIR10
Match: AT1G75090.1 (AT1G75090.1 DNA glycosylase superfamily protein)

HSP 1 Score: 320.1 bits (819), Expect = 1.8e-87
Identity = 166/306 (54.25%), Postives = 212/306 (69.28%), Query Frame = 1 

Query: 37  MSVATKLHSHAKPVLESREILGPGGNRDRAPEKPKCKQETLKNSEKQNKAL--PAIPESV 96
           MS+ +KL S  KP+ ESR IL   GNR +  +    K+  L     ++ A   P    SV
Sbjct: 1   MSIVSKLRSPVKPIDESRAILCSTGNRFKVTKTEMTKKPQLNPRVTKSPATKKPDSNFSV 60

Query: 97  IRDNSSIGSSCSSDSLLSSYSTKLLNPKVKPCDVKPVKAVAAGGDPNVTSTTPSLSVPGK 156
             D+SS  SS S  S +++ ++  +    K   V+ +  V A     V   +P +  P K
Sbjct: 61  STDDSSSSSSSSERSSVNTTNSGKVTTPSKRNGVEKLNNVVASVAV-VEDISPKIPGPVK 120

Query: 157 RCGWITPYSDPLYIAFHDEEWGVPVHDDRKLFELLVLSQALAELTWPLILCKRDIFRKVF 216
           RC WITP SDP+Y+ FHDEEWGVPV DD+KLFELLV SQALAE +WP IL +RD FRK+F
Sbjct: 121 RCHWITPNSDPIYVLFHDEEWGVPVRDDKKLFELLVFSQALAEFSWPSILRRRDDFRKLF 180

Query: 217 NDFDPSTIAKFTQNEFTTLKENGIQLLSEPKLRAIVENANQVLKIQQEFGTFSNYCWSFV 276
            +FDPS IA+FT+    +L+ NG  +LSE KLRAIVENA  VLK++QEFG+FSNYCW FV
Sbjct: 181 EEFDPSAIAQFTEKRLMSLRVNGCLILSEQKLRAIVENAKSVLKVKQEFGSFSNYCWRFV 240

Query: 277 NKKPITNRFRYARQVPVKTPKAEFMSKDLLRRGFRCVGPTVVYSFMQVTGIVNDHLVNCF 336
           N KP+ N +RY RQVPVK+PKAE++SKD+++RGFRCVGPTV+YSF+Q +GIVNDHL  CF
Sbjct: 241 NHKPLRNGYRYGRQVPVKSPKAEYISKDMMQRGFRCVGPTVMYSFLQASGIVNDHLTACF 300

Query: 337 RYQECD 341
           RYQEC+
Sbjct: 301 RYQECN 305

[Close]
BLAST of Cp4.1LG06g01240 vs. TAIR10
Match: AT1G15970.1 (AT1G15970.1 DNA glycosylase superfamily protein)

HSP 1 Score: 267.3 bits (682), Expect = 1.4e-71
Identity = 152/334 (45.51%), Postives = 200/334 (59.88%), Query Frame = 1 

Query: 37  MSVATKLHSHAKPVLESREILGPGGNR-DRAP-----EKPKCKQETLKNSEKQNK--ALP 96
           MSV  +  S      E R +LGP GN+  R P     EKP  ++  + + +++ K    P
Sbjct: 1   MSVPPRFRSVNSDEREFRSVLGPTGNKLQRKPPGMKLEKPMMEKTIIDSKDEKAKKPTTP 60

Query: 97  AIPESVIRDNSSIGSSC---SSDSLLSSYSTKLLNPKVKPCDVKPVKAVAAGGDPNVT-- 156
           A P + ++  SS+ SS    +S S+ +SYS+   +     C+  P+   ++     V   
Sbjct: 61  ASPRTTLKQCSSLCSSILRKNSASMTASYSSDASSS----CESSPLSVASSSSCKKVVRR 120

Query: 157 ----STTPSLSVPG--------------KRCGWITPYSDPLYIAFHDEEWGVPVHDDRKL 216
               S+T  LSV                KRC WITP +DP Y+AFHDEEWGVPVHDD+KL
Sbjct: 121 SGSVSSTRKLSVGKEEEKVSGDCFADGRKRCAWITPKADPCYVAFHDEEWGVPVHDDKKL 180

Query: 217 FELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAKFTQNEFTTLKENGIQLLSEPK 276
           FELL LS ALAEL+W  IL +R I R+VF DFDP  +A+    + T      I LLSE K
Sbjct: 181 FELLCLSGALAELSWTDILSRRHILREVFMDFDPVAVAELNDKKLTAPGTAAISLLSEVK 240

Query: 277 LRAIVENANQVLKIQQEFGTFSNYCWSFVNKKPITNRFRYARQVPVKTPKAEFMSKDLLR 336
           +R+I++N+  V KI  E G+   Y W+FVN KP  ++FRY RQVPVKT KAEF+SKDL+R
Sbjct: 241 IRSILDNSRHVRKIIAECGSLKKYMWNFVNNKPTQSQFRYQRQVPVKTSKAEFISKDLVR 300

Query: 337 RGFRCVGPTVVYSFMQVTGIVNDHLVNCFRYQEC 340
           RGFR V PTV+YSFMQ  G+ NDHL+ CFRYQ+C
Sbjct: 301 RGFRSVSPTVIYSFMQAAGLTNDHLIGCFRYQDC 330

[Close]
BLAST of Cp4.1LG06g01240 vs. TAIR10
Match: AT5G57970.1 (AT5G57970.1 DNA glycosylase superfamily protein)

HSP 1 Score: 266.2 bits (679), Expect = 3.0e-71
Identity = 134/258 (51.94%), Postives = 168/258 (65.12%), Query Frame = 1 

Query: 92  ESVIRDNSSIGSSCSSDSLLSSYSTKL----------LNPKVKPCDVKPVKAVAAGGDPN 151
           E  +  N S+ +S SSD+ + S+ ++           +  + K    KP   V+ G    
Sbjct: 86  EQNLNSNLSLNASFSSDASMDSFHSRASTGRLIRSYSVGSRSKSYPSKPRSVVSEGA--- 145

Query: 152 VTSTTPSLSVPGKRCGWITPYSDPLYIAFHDEEWGVPVHDDRKLFELLVLSQALAELTWP 211
              + P+ S   KRC W+TP SDP YI FHDEEWGVPVHDD++LFELLVLS ALAE TWP
Sbjct: 146 -LDSPPNGSETKKRCTWVTPNSDPCYIVFHDEEWGVPVHDDKRLFELLVLSGALAEHTWP 205

Query: 212 LILCKRDIFRKVFNDFDPSTIAKFTQNEFTTLKENGIQLLSEPKLRAIVENANQVLKIQQ 271
            IL KR  FR+VF DFDP+ I K  + +          LLS+ KLRA++ENA Q+LK+ +
Sbjct: 206 TILSKRQAFREVFADFDPNAIVKINEKKIIGPGSPASTLLSDLKLRAVIENARQILKVIE 265

Query: 272 EFGTFSNYCWSFVNKKPITNRFRYARQVPVKTPKAEFMSKDLLRRGFRCVGPTVVYSFMQ 331
           E+G+F  Y WSFV  K I ++FRY RQVP KTPKAE +SKDL+RRGFR VGPTVVYSFMQ
Sbjct: 266 EYGSFDKYIWSFVKNKAIVSKFRYQRQVPAKTPKAEVISKDLVRRGFRSVGPTVVYSFMQ 325

Query: 332 VTGIVNDHLVNCFRYQEC 340
             GI NDHL +CFR+  C
Sbjct: 326 AAGITNDHLTSCFRFHHC 339

[Close]
BLAST of Cp4.1LG06g01240 vs. TAIR10
Match: AT1G80850.1 (AT1G80850.1 DNA glycosylase superfamily protein)

HSP 1 Score: 255.8 bits (652), Expect = 4.1e-68
Identity = 150/319 (47.02%), Postives = 190/319 (59.56%), Query Frame = 1 

Query: 37  MSVATKLHSHAKPVLESREILGPGGNR------DRAPEKPKC-KQETLKNSEKQNKALPA 96
           MS   ++ S      E R +LGP GN+       +  +KP   K + L  +EK  +  P 
Sbjct: 1   MSAPPRVRSVDSSDREFRSVLGPAGNKLQQKPLSKPVKKPVAEKTKNLTFTEKMPQCSPL 60

Query: 97  IPESVIRDNSSIGSSCSSD-------SLLSSYSTKLLNPKVKPC-DVKPVKAVAAGGDPN 156
            P  + R+  S+ +S SSD       S LS  ST      ++    V    ++       
Sbjct: 61  SPPILRRNGISMTASYSSDASSSCESSPLSMTSTSSGKRVLRRSGSVSSSSSLRRNLTEE 120

Query: 157 VTSTTPSLSVPG-KRCGWITPYSDPLYIAFHDEEWGVPVHDDRKLFELLVLSQALAELTW 216
                      G KRC WITP SD  YIAFHDEEWGVPVHDD++LFELL LS ALAEL+W
Sbjct: 121 RDEKASDCFCDGRKRCAWITPKSDQCYIAFHDEEWGVPVHDDKRLFELLSLSGALAELSW 180

Query: 217 PLILCKRDIFRKVFNDFDPSTIAKFTQNEFTTLKENGIQLLSEPKLRAIVENANQVLKIQ 276
             IL KR +FR+VF DFDP  I++ T  + T+ +     LLSE KLR+I+ENANQV KI 
Sbjct: 181 KDILSKRQLFREVFMDFDPIAISELTNKKITSPEIAATTLLSEQKLRSILENANQVCKII 240

Query: 277 QEFGTFSNYCWSFVNKKPITNRFRYARQVPVKTPKAEFMSKDLLRRGFRCVGPTVVYSFM 336
             FG+F  Y W+FVN+KP  ++FRY RQVPVKT KAE +SKDL+RRGFR V PTV+YSFM
Sbjct: 241 GAFGSFDKYIWNFVNQKPTQSQFRYPRQVPVKTSKAELISKDLVRRGFRSVSPTVIYSFM 300

Query: 337 QVTGIVNDHLVNCFRYQEC 340
           Q  G+ NDHL  CFR+ +C
Sbjct: 301 QTAGLTNDHLTCCFRHHDC 319

[Close]
BLAST of Cp4.1LG06g01240 vs. TAIR10
Match: AT1G13635.1 (AT1G13635.1 DNA glycosylase superfamily protein)

HSP 1 Score: 214.9 bits (546), Expect = 8.0e-56
Identity = 90/186 (48.39%), Postives = 133/186 (71.51%), Query Frame = 1 

Query: 154 KRCGWITPYSDPLYIAFHDEEWGVPVHDDRKLFELLVLSQALAELTWPLILCKRDIFRKV 213
           KRC WIT  SD +Y+ FHD++WGVPV+DD  LFE L +S  L +  W  IL +++ FR+ 
Sbjct: 115 KRCNWITKKSDEVYVMFHDQQWGVPVYDDNLLFEFLAMSGMLMDYNWTEILKRKEHFREA 174

Query: 214 FNDFDPSTIAKFTQNEFTTLKENGIQLLSEPKLRAIVENANQVLKIQQEFGTFSNYCWSF 273
           F +FDP+ +AK  + E   +  N   +L E ++R IV+NA  + K+  EFG+FS++ W F
Sbjct: 175 FCEFDPNRVAKMGEKEIAEIASNKAIMLQESRVRCIVDNAKCITKVVNEFGSFSSFVWGF 234

Query: 274 VNKKPITNRFRYARQVPVKTPKAEFMSKDLLRRGFRCVGPTVVYSFMQVTGIVNDHLVNC 333
           ++ KPI N+F+Y+R VP+++PKAE +SKD+++RGFR VGP +V+SFMQ  G+  DHLV+C
Sbjct: 235 MDYKPIINKFKYSRNVPLRSPKAEIISKDMIKRGFRFVGPVIVHSFMQAAGLTIDHLVDC 294

Query: 334 FRYQEC 340
           FR+ +C
Sbjct: 295 FRHGDC 300

[Close]
BLAST of Cp4.1LG06g01240 vs. NCBI nr
Match: gi|449460123|ref|XP_004147795.1| (PREDICTED: uncharacterized protein LOC101206397 [Cucumis sativus])

HSP 1 Score: 508.4 bits (1308), Expect = 1.0e-140
Identity = 252/319 (79.00%), Postives = 277/319 (86.83%), Query Frame = 1 

Query: 37  MSVATKLHSHAKPVLESREILGPGGNRDRAPEKPKCKQETLKNSEKQNKALPAIPESVIR 96
           MSVATKL SH KP LE R ILGPGGNRDRAP+ PKCK ETLK +EKQ+KALPAI ESVIR
Sbjct: 1   MSVATKLQSHVKPALEPRAILGPGGNRDRAPQNPKCKPETLKKTEKQSKALPAISESVIR 60

Query: 97  DNSSIGSSCSSDSLLSSYSTKLLNPKVKPCDVKPVKAVAAGGDPNVTSTTPSLSVPGKRC 156
           DN S+GSSCSSDSL S+YS KLL P         VK V+AGGD N T+T+P+LS+PGKRC
Sbjct: 61  DNVSVGSSCSSDSLSSNYSAKLLKPYA-------VKPVSAGGDSNATTTSPALSLPGKRC 120

Query: 157 GWITPYSDPLYIAFHDEEWGVPVHDDRKLFELLVLSQALAELTWPLILCKRDIFRKVFND 216
            WIT +SDPLYIAFHDEEWGVP+HDD+KLFELLVLSQALAELTWPLIL KRD+FRKV ND
Sbjct: 121 DWITLHSDPLYIAFHDEEWGVPIHDDKKLFELLVLSQALAELTWPLILSKRDVFRKVLND 180

Query: 217 FDPSTIAKFTQNEFTTLKENGIQLLSEPKLRAIVENANQVLKIQQEFGTFSNYCWSFVNK 276
           FDPS+IA+FT+NEFTTLK NGIQLLSEPKLRAIV+NANQVLKIQ+EFG+FSNYCWSFVNK
Sbjct: 181 FDPSSIAQFTENEFTTLKVNGIQLLSEPKLRAIVDNANQVLKIQKEFGSFSNYCWSFVNK 240

Query: 277 KPITNRFRYARQVPVKTPKAEFMSKDLLRRGFRCVGPTVVYSFMQVTGIVNDHLVNCFRY 336
           KPI NR RY RQVPVKTPKAEFMSKD++RRGFRCVGPTVVYSFMQV GIVNDHLV+CFRY
Sbjct: 241 KPIRNRHRYNRQVPVKTPKAEFMSKDMIRRGFRCVGPTVVYSFMQVAGIVNDHLVSCFRY 300

Query: 337 QEC-----DGMKLRVEGQR 351
           +EC     D  KLRVE +R
Sbjct: 301 EECDPKVKDDKKLRVEDKR 312

[Close]
BLAST of Cp4.1LG06g01240 vs. NCBI nr
Match: gi|659133198|ref|XP_008466607.1| (PREDICTED: uncharacterized protein LOC103503975 [Cucumis melo])

HSP 1 Score: 505.8 bits (1301), Expect = 6.5e-140
Identity = 253/320 (79.06%), Postives = 274/320 (85.62%), Query Frame = 1 

Query: 37  MSVATKLHSHAKPVLESREILGPGGNRDRAPEKPKCKQETLKNSEKQNKALPAIPESVIR 96
           MSVATKL SHAKP LE R ILGPGGNRDRAP  PKCK ETLK +EKQ+KALP I E VIR
Sbjct: 1   MSVATKLQSHAKPALEPRAILGPGGNRDRAPHNPKCKPETLKKTEKQSKALPVISELVIR 60

Query: 97  DNSSIGSSCSSDSLLSSYSTKLLNPKVKPCDVKPVKAVAAGGDPNVTSTTPSLSVPGKRC 156
           DN S+GSSCSSDSL S+YS KLL P         VK V+AGGD + T+T+P+LS+PGKRC
Sbjct: 61  DNVSVGSSCSSDSLSSNYSVKLLKPYA-------VKPVSAGGDSSATTTSPALSLPGKRC 120

Query: 157 GWITPYSDPLYIAFHDEEWGVPVHDDRKLFELLVLSQALAELTWPLILCKRDIFRKVFND 216
            WIT +SDPLYIAFHDEEWGVPVHDD+KLFELLVLSQALAELTWPLIL KRDIFRKV ND
Sbjct: 121 DWITLHSDPLYIAFHDEEWGVPVHDDKKLFELLVLSQALAELTWPLILSKRDIFRKVLND 180

Query: 217 FDPSTIAKFTQNEFTTLKENGIQLLSEPKLRAIVENANQVLKIQQEFGTFSNYCWSFVNK 276
           FDPS+IA+F +NEFTTLK NGIQLLSEPKLRAIVENANQVLKIQ+EFG+FSNYCWSFVNK
Sbjct: 181 FDPSSIAQFKENEFTTLKVNGIQLLSEPKLRAIVENANQVLKIQKEFGSFSNYCWSFVNK 240

Query: 277 KPITNRFRYARQVPVKTPKAEFMSKDLLRRGFRCVGPTVVYSFMQVTGIVNDHLVNCFRY 336
           KPI NRFRY RQVPVKTPKAEFMSKD++RRGFRCVGPTVVYSFMQV GIVNDHL NCFRY
Sbjct: 241 KPIRNRFRYNRQVPVKTPKAEFMSKDMMRRGFRCVGPTVVYSFMQVAGIVNDHLANCFRY 300

Query: 337 QEC------DGMKLRVEGQR 351
           +EC      D  KLRVE +R
Sbjct: 301 EECDTTKIKDDKKLRVEDKR 313

[Close]
BLAST of Cp4.1LG06g01240 vs. NCBI nr
Match: gi|703135970|ref|XP_010106031.1| (Putative Glutamine amidotransferase [Morus notabilis])

HSP 1 Score: 394.4 bits (1012), Expect = 2.1e-106
Identity = 207/338 (61.24%), Postives = 244/338 (72.19%), Query Frame = 1 

Query: 37  MSVATKLHSHAKPVLESREILGPGGNRDRAPEKPKCKQETLKNSEKQNKALPA----IPE 96
           MSVATKLHS   PV E R ILGPGGNR R  E PK K E LK  + Q    P     +P+
Sbjct: 1   MSVATKLHS---PVCEPRAILGPGGNRVRVSEYPKRKGEALKKPQAQRTRKPTAVSEVPQ 60

Query: 97  SVIRDNSSIGSSCSSDS-----LLSSYSTKLLNPKVKPCDVKPVKAVAAGGDPNVTSTTP 156
           SV+R N S+ SSCSSDS     L  + S+K   P VK   +KPVK V  G +    +  P
Sbjct: 61  SVVRSNGSVDSSCSSDSSSSGSLAKTVSSKKTPPTVKRKGLKPVKVVPVGVE--AVAALP 120

Query: 157 SLSVPGKRCGWITPYSDPLYIAFHDEEWGVPVHDDRKLFELLVLSQALAELTWPLILCKR 216
            +  P KRC WITP SD +Y +FHDEEWGVP+HDDRKLFELLV SQALAELTWP IL KR
Sbjct: 121 KILGPPKRCDWITPNSDSIYTSFHDEEWGVPIHDDRKLFELLVFSQALAELTWPAILNKR 180

Query: 217 DIFRKVFNDFDPSTIAKFTQNEFTTLKENGIQLLSEPKLRAIVENANQVLKIQQEFGTFS 276
           +IFRK+F +FDPS+IA+F + +  +LK NG  LLSEPKLRAIVENA Q+LKIQQEFG+FS
Sbjct: 181 EIFRKLFENFDPSSIAQFNEKKLLSLKVNGNLLLSEPKLRAIVENAKQILKIQQEFGSFS 240

Query: 277 NYCWSFVNKKPITNRFRYARQVPVKTPKAEFMSKDLLRRGFRCVGPTVVYSFMQVTGIVN 336
           NYCWSFVN KPI N FRY RQVPVK+PKA+ +SKD+++RGFRCVGPTV+YSFMQV GIVN
Sbjct: 241 NYCWSFVNDKPIKNGFRYGRQVPVKSPKADLISKDMMQRGFRCVGPTVIYSFMQVAGIVN 300

Query: 337 DHLVNCFRYQECD---GMKLRVEGQRSELLTGALETRS 363
           DHL++CFRY+EC       L+   + S +LT ALE  S
Sbjct: 301 DHLLSCFRYEECKINVEKDLKPRTEESAILTEALEKTS 333

[Close]
BLAST of Cp4.1LG06g01240 vs. NCBI nr
Match: gi|147867293|emb|CAN83288.1| (hypothetical protein VITISV_033233 [Vitis vinifera])

HSP 1 Score: 391.0 bits (1003), Expect = 2.3e-105
Identity = 203/339 (59.88%), Postives = 248/339 (73.16%), Query Frame = 1 

Query: 37  MSVATKLHSHAKPVLESREILGPGGNRDRAPEKPKCKQETLKNSEKQNKALPAIPESVIR 96
           MSVATKL S AKP+ E R +LGPGGNR R  E+ KCK+E LK  ++  K    +PE+VIR
Sbjct: 1   MSVATKLQSPAKPLSEGRVVLGPGGNRFRVSEEAKCKKEGLKKPQQHRKQSSEVPEAVIR 60

Query: 97  DNSSIGSSCSSDSLLSSYSTKLLNPK--VKPCDVKPVKAVAAGGDPNVTSTTPSLSVPGK 156
           +N S  SSCSSDS  S  S K++N +  VK   +KPVK V  G           + VP K
Sbjct: 61  NNLSFESSCSSDSSSSGSSVKMVNSRGRVKRNGLKPVKVVPHG-----------VEVPAK 120

Query: 157 RCGWITPYSDPLYIAFHDEEWGVPVHDDRKLFELLVLSQALAELTWPLILCKRDIFRKVF 216
           RC WITP SDPLY +FHDEEWGVPVHDD+KLFELLVLSQALAEL+WP IL KRDIFRK+F
Sbjct: 121 RCDWITPNSDPLYTSFHDEEWGVPVHDDKKLFELLVLSQALAELSWPTILNKRDIFRKLF 180

Query: 217 NDFDPSTIAKFTQNEFTTLKENGIQLLSEPKLRAIVENANQVLKI----------QQEFG 276
           ++FDPS+IAKFT  +  +LK +G  LLSEPKLRA++ENANQ+LK+           QEFG
Sbjct: 181 DNFDPSSIAKFTDKKLLSLKASGGTLLSEPKLRAVIENANQMLKVIKFITRCLWFSQEFG 240

Query: 277 TFSNYCWSFVNKKPITNRFRYARQVPVKTP-KAEFMSKDLLRRGFRCVGPTVVYSFMQVT 336
           +FSNYCWSF+N KP+ N FRYARQVPVKT  +   +SKDL++RGFRCVGPTV+YSFMQV 
Sbjct: 241 SFSNYCWSFINHKPMKNGFRYARQVPVKTQNQNNIISKDLMQRGFRCVGPTVIYSFMQVA 300

Query: 337 GIVNDHLVNCFRYQECDG---MKLRVEGQRSELLTGALE 360
           G+VNDHL+ CFR+QEC+      L+ + + +E+LT ALE
Sbjct: 301 GLVNDHLLTCFRFQECNSNIKKDLQAKTEETEVLTNALE 328

[Close]
BLAST of Cp4.1LG06g01240 vs. NCBI nr
Match: gi|590593103|ref|XP_007017467.1| (DNA-3-methyladenine glycosylase, putative [Theobroma cacao])

HSP 1 Score: 390.2 bits (1001), Expect = 4.0e-105
Identity = 199/307 (64.82%), Postives = 234/307 (76.22%), Query Frame = 1 

Query: 37  MSVATKLHSHAKPVLESREILGPGGNRDRAPEKPKCKQETLKNSEKQNKALPAIPESVIR 96
           MSVATKL S   PV E R ILGP GNR R  ++ K K E  K  ++    +   P+SV++
Sbjct: 1   MSVATKLKSSPTPVTEPRAILGPTGNRVRVSDESKRKPEAQKKPQRPKFRVSKSPQSVVQ 60

Query: 97  DNSSIGSSCSSDSLLSSYSTKLLNPK--VKPCDVKPVKA-VAAGGDPNVTSTTPSLSVPG 156
            N S+ SSCSSDS  S+ S K ++ K  VK   VKPVKA VA   D  V   +P L  P 
Sbjct: 61  SNVSVDSSCSSDSSSSNSSVKTVSSKKTVKRIGVKPVKAKVAPTADEVVAEPSPVLPEPL 120

Query: 157 KRCGWITPYSDPLYIAFHDEEWGVPVHDDRKLFELLVLSQALAELTWPLILCKRDIFRKV 216
           KRC WITP+SDPLY + HD+EWGVPVHDDRKLFELLV SQALAEL+WP IL KRDIFRK+
Sbjct: 121 KRCDWITPFSDPLYTSLHDKEWGVPVHDDRKLFELLVFSQALAELSWPTILNKRDIFRKL 180

Query: 217 FNDFDPSTIAKFTQNEFTTLKENGIQLLSEPKLRAIVENANQVLKIQQEFGTFSNYCWSF 276
           F++FDPS+IA+FT+ +  +LK NG  LLSEPKLRA+VENA Q+LK+QQEFG+FS+YCW F
Sbjct: 181 FDNFDPSSIAQFTEKKLLSLKVNGSLLLSEPKLRAVVENAKQMLKVQQEFGSFSSYCWGF 240

Query: 277 VNKKPITNRFRYARQVPVKTPKAEFMSKDLLRRGFRCVGPTVVYSFMQVTGIVNDHLVNC 336
           VN KPI N FRY RQVPVKTPKAE +SKD+++RGFRCVGPTVVYSFMQV GIVNDHLV C
Sbjct: 241 VNHKPIRNGFRYVRQVPVKTPKAELISKDMMQRGFRCVGPTVVYSFMQVAGIVNDHLVTC 300

Query: 337 FRYQECD 341
           FRYQEC+
Sbjct: 301 FRYQECN 307

The following BLAST results are available for this feature:
BLAST of Cp4.1LG06g01240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GUAA_HELHP1.1e-4142.19Probable GMP synthase [glutamine-hydrolyzing] OS=Helicobacter hepaticus (strain ... [more]
3MG1_ECOLI5.4e-3840.44DNA-3-methyladenine glycosylase 1 OS=Escherichia coli (strain K12) GN=tag PE=1 S... [more]
3MGA_HAEIN2.5e-3542.46DNA-3-methyladenine glycosylase OS=Haemophilus influenzae (strain ATCC 51907 / D... [more]
BLAST of Cp4.1LG06g01240 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LG22_CUCSA6.9e-14179.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G855280 PE=4 SV=1[more]
W9RT44_9ROSA1.5e-10661.24Putative Glutamine amidotransferase OS=Morus notabilis GN=L484_021208 PE=4 SV=1[more]
A5BIS5_VITVI1.6e-10559.88Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033233 PE=4 SV=1[more]
A0A061FDE4_THECC2.8e-10564.82DNA-3-methyladenine glycosylase, putative OS=Theobroma cacao GN=TCM_033995 PE=4 ... [more]
F6H1G2_VITVI8.9e-10460.49Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g12030 PE=4 SV=... [more]
BLAST of Cp4.1LG06g01240 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G75090.11.8e-8754.25 DNA glycosylase superfamily protein[more]
AT1G15970.11.4e-7145.51 DNA glycosylase superfamily protein[more]
AT5G57970.13.0e-7151.94 DNA glycosylase superfamily protein[more]
AT1G80850.14.1e-6847.02 DNA glycosylase superfamily protein[more]
AT1G13635.18.0e-5648.39 DNA glycosylase superfamily protein[more]
BLAST of Cp4.1LG06g01240 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449460123|ref|XP_004147795.1|1.0e-14079.00PREDICTED: uncharacterized protein LOC101206397 [Cucumis sativus][more]
gi|659133198|ref|XP_008466607.1|6.5e-14079.06PREDICTED: uncharacterized protein LOC103503975 [Cucumis melo][more]
gi|703135970|ref|XP_010106031.1|2.1e-10661.24Putative Glutamine amidotransferase [Morus notabilis][more]
gi|147867293|emb|CAN83288.1|2.3e-10559.88hypothetical protein VITISV_033233 [Vitis vinifera][more]
gi|590593103|ref|XP_007017467.1|4.0e-10564.82DNA-3-methyladenine glycosylase, putative [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006284base-excision repair
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0008725DNA-3-methyladenine glycosylase activity
Vocabulary: INTERPRO
TermDefinition
IPR011257DNA_glycosylase
IPR005019Adenine_glyco
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006284 base-excision repair
biological_process GO:0006281 DNA repair
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008725 DNA-3-methyladenine glycosylase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG06g01240.1Cp4.1LG06g01240.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005019Methyladenine glycosylasePFAMPF03352Adenine_glycocoord: 163..335
score: 1.4
IPR011257DNA glycosylaseGENE3DG3DSA:1.10.340.30coord: 154..337
score: 1.4
IPR011257DNA glycosylaseunknownSSF48150DNA-glycosylasecoord: 154..339
score: 2.51
NoneNo IPR availablePANTHERPTHR31116FAMILY NOT NAMEDcoord: 38..340
score: 6.8E
NoneNo IPR availablePANTHERPTHR31116:SF53-METHYLADENINE GLYCOSYLASE I-RELATEDcoord: 38..340
score: 6.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG06g01240Cucsa.342140Cucumber (Gy14) v1cgycpeB0896
Cp4.1LG06g01240CmaCh01G018900Cucurbita maxima (Rimu)cmacpeB507
Cp4.1LG06g01240CmoCh09G001690Cucurbita moschata (Rifu)cmocpeB034
Cp4.1LG06g01240CmoCh01G019530Cucurbita moschata (Rifu)cmocpeB465
Cp4.1LG06g01240Cla020743Watermelon (97103) v1cpewmB765
Cp4.1LG06g01240Csa3G855280Cucumber (Chinese Long) v2cpecuB779
Cp4.1LG06g01240MELO3C003879Melon (DHL92) v3.5.1cpemeB726
Cp4.1LG06g01240ClCG05G019180Watermelon (Charleston Gray)cpewcgB700
Cp4.1LG06g01240CSPI03G42480Wild cucumber (PI 183967)cpecpiB781
Cp4.1LG06g01240Lsi04G016410Bottle gourd (USVL1VR-Ls)cpelsiB638
Cp4.1LG06g01240MELO3C003879.2Melon (DHL92) v3.6.1cpemedB859
Cp4.1LG06g01240CsaV3_3G044900Cucumber (Chinese Long) v3cpecucB0966
Cp4.1LG06g01240Bhi11G002157Wax gourdcpewgoB0973
Cp4.1LG06g01240CsGy3G040000Cucumber (Gy14) v2cgybcpeB438
Cp4.1LG06g01240Carg17129Silver-seed gourdcarcpeB1310
Cp4.1LG06g01240Carg08737Silver-seed gourdcarcpeB0154
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG06g01240Cp4.1LG02g07420Cucurbita pepo (Zucchini)cpecpeB459
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG06g01240Cucurbita pepo (Zucchini)cpecpeB136
Cp4.1LG06g01240Cucurbita pepo (Zucchini)cpecpeB422
Cp4.1LG06g01240Cucurbita pepo (Zucchini)cpecpeB510
Cp4.1LG06g01240Cucumber (Gy14) v1cgycpeB0613
Cp4.1LG06g01240Cucurbita maxima (Rimu)cmacpeB060
Cp4.1LG06g01240Cucurbita maxima (Rimu)cmacpeB198
Cp4.1LG06g01240Cucurbita maxima (Rimu)cmacpeB787
Cp4.1LG06g01240Cucurbita moschata (Rifu)cmocpeB172
Cp4.1LG06g01240Cucurbita moschata (Rifu)cmocpeB740
Cp4.1LG06g01240Bottle gourd (USVL1VR-Ls)cpelsiB644
Cp4.1LG06g01240Watermelon (Charleston Gray)cpewcgB708
Cp4.1LG06g01240Watermelon (97103) v1cpewmB756
Cp4.1LG06g01240Melon (DHL92) v3.5.1cpemeB717
Cp4.1LG06g01240Cucumber (Gy14) v2cgybcpeB254
Cp4.1LG06g01240Melon (DHL92) v3.6.1cpemedB852
Cp4.1LG06g01240Silver-seed gourdcarcpeB0267
Cp4.1LG06g01240Silver-seed gourdcarcpeB1365