Cp4.1LG05g09310 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG05g09310
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Transmembrane protein, putative
Location	Cp4.1LG05 : 6138903 .. 6142890 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGCAGTGGCTTGAAGCTTTCTCTGGCAGTTTCCAGCTTCGATTCGTTTATCAAGAAAGATAATCCAAATCCTACCAGAACACAAAAGCTACCCAGAACAAGAAAAACGCAGAAAAGTAACTCAAAATAGAGGGCAAATTTTACTCTGTTACCTCTTTGTTGACATCGGGATGATACTTGAGAGCCAGTTTCCGATAAGCCCTCTTGATTTCATTTGGAGTTGCAGTCGGAGAAACGCCCAGCACGTCGTACGGAGACTCTCTGCGACTCGTTCTCACGAGGGTTAAGCAGCTCCTCCTCCTATACGTCAAGTAACTGGATTCAAAGCTCTGCGGCGCCGACAACGGGTAGCTGAAGAACCGGCGGAAGGATATTGAAGATTTTGCTTGATTTCGCGAAAAGAAAATAGAAGGATGAGAAGCAGATCTTGAGAAGGCGTCGGAAATGATTTGCGTTGTAGCCAATTCGAGCATGTTCGTGAACTAATCGTCGATTCCTTTTCTCTCTCGGTTTGTTTTTCTTCTCATTTTACTTGAGGCTCCAATTGAGACATTTGGCTTTCGGATTTGGTTTTGTTGCTTGTGGCCCTCACTTTTTGGCGTTGGATTAAATAGGTTTCTTCTACACGAGATTACTCATTTACCATACATTCATATATCCCACTTTTGGCTGCGGCGCTGCATTTCTCGGGGCTCCGAACAGATTTCCGGCCAACCGCCGTGGATTTCTTTCCTCTTCCGATGAGTACGTTGAGCTTATCGACTCCACACTCGATTAATCATCAATGGACTAACCCGTTTGACACATTTTGCTGCCAAGCTCATAGGTTTCTACGCCGCATGTGGCAAAATCACGATGCTTGGACATTGTTCAACAAAATTACCCACATAACCTCCCGCCGGTAGATTGTCTTGATTGGGGTCTATTCTCGTTCTAGTCTTCTGGAGAGATCCATCGATTGGAAAGTAGAACAAAACATTGCTTATAAAGATACGGATACCTCTCATTGTCCAAACATTGAGGGGAAGCCTAAAAAGAACAATATCGTTGTTACAAGAATGCTTGGAAGTCGGTGAGTGACCAAATGAATGGTAGGGAAGGATTTGGTGGCATTGAATGCGATGGTTTCAGGCTATGCTCACCAAGGATCAGCAGAAGAAAATTTGGTGGCATTGAATGTTATTTTTTATGATATCTGAAAGGAATTCAGCTACTTGAAACTCCATGATTTTTTGCTATGCTAGCTAATCAAGGAATTCAGATGATGAATGAAGATGAGAAGAAGCTTGATCATCTGACATTTACAGCAGAGTAAATAACCCAATAATTTCAATATAATTAAGCAGAGTGTAGGGGTTGTAGTTCATTACACATAACCCAATAATCAAATTGATTCAAGTAGTTTTCCATTCAAGATTCAAATCACTCACTTCACTTTGAATCCTGTCAAGCCACACAGAGAGGAGAAAGCGTACGAATGCTCCATTCAAGAAGATGAAATTGTCCCCAACTTCATTTATCATTTGAATTTCGGATTAGGAACACATTGGAAGCAAGGCGCAGTTAAATCCTACTTGTTAGTTGTCATTTCCATTAATCATGCTGCTCTTGCGTGCTACACGAGTGGGTCGGCACTGCGCACATGTTCATCATTGGCATGCCGGTATCGTTAAGACCGTGACCATGATGAGCTCCCATACCATAAAGCATCATAGGCATCATCGGAGACGGCATATAAGTCATCGGGAAAGTAGCCGGTAAATACATGTTTCCATGTGAATCTGCGCTGTGAGAAGAATCATGTGAGTTCTGCGTCATCGGCATTGGAACGAGAGCCTCGTCGGTCGTTGAGGATATCTGTGTCCTCTTCAAGTAAAGACGATACTTCTGTAAATGACTGGCAACGTTCTCGCGAGTTAATCCATCGACATTCATCAATCGCATAATAGCTTTGGGAGCAGCGTCTTTGAGCCCTAAATGAGAAACCACATCAACGAACCGCTTGTGTAATTGCGGAGTCCAAGCGAGCCTCGGCCGCTTCAAGGTTCGAGCCAACGCCGCATCCTCGATCAAATTCTCCGCTCCAACAAAATCAACCTTCCTCAAATTTCGCGAATCAGATCCCAACTCATCTGGATCAACTGCCTCGTCCGATTCAACCATCAAAGCGTCTTCACCTCGCGTCCTACCGTCATTAAACTCAAAACTTGTATAACCTTCCAATTGTCCATCGCGAATATTCAATATCGTCGTCTTCGACGCCGAATAAACATCCGATTTACTCCGTCGCGGTTCCATCAAAATCCTGAACGCCGAAGCGAGTTCCTGCGGAATCAGCGATTGAGAAAGAGGAGTTAATCTATCAGCATCAGGCAGTCCCTCCTCCCACAGAAGTACTCTTTCATCGCCATTCATACAACCACTACCACCATTACCGTGGTACTCCCTCTTCTTTTGCTCCATAACAAATTCGTCGATTCAGATTCTTCCCCCCCTTCGATTGCACCAAAAATAGGATCAAAATGTCAGTAATCAATCAGCCAACCATATCGCGTAGTAGCTTATTCGATCGATGCATTACATTTTTCAAATGAAGAATGTGTTTGCGAGGCAGGAAAATCAGAGAAAAATTGCGGAAAATTGGGAACACGGTCTCTCACAAGAAAATTCGGCGAGATATTTCTTGATACTATCCAGATTTCCGACACGTGGACTTTGGATATCTACGGCCGTCGACGATTCAACGGTTGAGATCATAATAGCAGCTGATCGCGTACTGCTTTGCATTGGTTGAAGAGCACTAGTCTCGTCACTTTATCCACGTACGAGAGGAAGTTAATGGGCCTGTAAGTGGAAATGAGCCCATTGGGCCCAAATTCATATAGGCCCATCAGGGAAATTATTTATTTATTTATTTAAATTTATTTCTGGAAGTGAAAATACCGGTTTGTAGTCTCTTTACAACGACGAGGACGAAACGATCTTGTGGATCTGGACAGCGAGGATGCGTCTGCCACTGAAGCAGTGAGAGAAAGCGAAGCGCGGCCATGGCTACCACCACATCCACTTCCCTATCGCTACCGATTTTCCTCTCCTCTTCCAATCCAAACTCCTACAAGCTTCCTTCTCTTCGTTCCTCATCTGCATCCTTTGCTTCATCCCTCAATCTCTCTCGCCGACCGGTAGCTCTCGTTCTCATCCAAAATCGTTCAAGACGAGGCTCAATCCGTAGGCTCCATGCCATTTCTGAAGAAACCTTGGCCTCGGAATCCGCCGCGCTGGTGGAGAAATCACAGGAGATAGCATCGACTGGTGACGACGGCGTATCCACCATAATCTCTGTTCTTCTGTTTGTCGCTTTCATCGGTCTATCTGTTCTCACAATCGGGGTAAAATCAGTGCTCGGATTCGAATTTCGAAGTTGAATTTCTGCAGTGAATAATTTTGTTCGAATAGCTGTTGATTTTATCGGATTGGTTAGGGTTTTTACATTGGGAAGTGTATTTCGAGTTTCAGGTAATCTACATTGCTGTGACGGATTTCTTGCAGAAGAGGGAGAAGGAAAAGTTTGAGAAAGAGGAGGCGGCTAACAAGAAGAGCGGAAAGAAGAAGAGGGTGAAGGTGAAGGCCAGAGCTGGACCCAGGGGATTCGGCCAGAAGGTCGAACAAGAAGAGGATTGATGTTATCACCAGCTGTTGATCTTATTCTTGCTCGTTTAATTTTCCATAAATTCAGTTTAATTTGCTGAGTTAGGGCATCCTAAATTTTCTCGTTGGAATTGGAATTGGAATGATCCATCCAGATGAACTCGATTAAATTTTGTTTGATTTTTAATCATCTACCTCGAACGATGAGTAGTTCAACCATTCTAAATTTGGAAAGTTTATGACCTCAGCTAGGATAAGCCTAACATTTTAACTATTTTTCTACTTAAAAGCTAAAAGCTAATTTAAAGGATGAAGGGTAATGTTGCAATTTTTAATTTCA

mRNA sequence

TCGCAGTGGCTTGAAGCTTTCTCTGGCAGTTTCCAGCTTCGATTCGTTTATCAAGAAAGATAATCCAAATCCTACCAGAACACAAAAGCTACCCAGAACAAGAAAAACGCAGAAAAGTAACTCAAAATAGAGGGCAAATTTTACTCTGTTACCTCTTTGTTGACATCGGGATGATACTTGAGAGCCAGTTTCCGATAAGCCCTCTTGATTTCATTTGGAGTTGCAGTCGGAGAAACGCCCAGCACGTCGTACGGAGACTCTCTGCGACTCGTTCTCACGAGGGTTAAGCAGCTCCTCCTCCTATACGTCAAGTAACTGGATTCAAAGCTCTGCGGCGCCGACAACGGGTAGCTGAAGAACCGGCGGAAGGATATTGAAGATTTTGCTTGATTTCGCGAAAAGAAAATAGAAGGATGAGAAGCAGATCTTGAGAAGGCGTCGGAAATGATTTGCGTTGTAGCCAATTCGAGCATGTTCGTGAACTAATCGTCGATTCCTTTTCTCTCTCGGTTTGTTTTTCTTCTCATTTTACTTGAGGCTCCAATTGAGACATTTGGCTTTCGGATTTGGTTTTGTTGCTTGTGGCCCTCACTTTTTGGCGTTGGATTAAATAGGTTTCTTCTACACGAGATTACTCATTTACCATACATTCATATATCCCACTTTTGGCTGCGGCGCTGCATTTCTCGGGGCTCCGAACAGATTTCCGGCCAACCGCCGTGGATTTCTTTCCTCTTCCGATGAGTACGTTGAGCTTATCGACTCCACACTCGATTAATCATCAATGGACTAACCCGTTTGACACATTTTGCTGCCAAGCTCATAGGTTTCTACGCCGCATGTGGCAAAATCACGATGCTTGGACATTGTTCAACAAAATTACCCACATAACCTCCCGCCGGTAGATTGTCTTGATTGGGGTCTATTCTCGTTCTAGTCTTCTGGAGAGATCCATCGATTGGAAAGTAGAACAAAACATTGCTTATAAAGATACGGATACCTCTCATTGTCCAAACATTGAGGGGAAGCCTAAAAAGAACAATATCGTTGTTACAAGAATGCTTGGAAGTCGGTGAGTGACCAAATGAATGGTAGGGAAGGATTTGGTGGCATTGAATGCGATGGTTTCAGGCTATGCTCACCAAGGATCAGCAGAAGAAAATTTGGTGGCATTGAATGTTATTTTTTATGATATCTGAAAGGAATTCAGCTACTTGAAACTCCATGATTTTTTGCTATGCTAGCTAATCAAGGAATTCAGATGATGAATGAAGATGAGAAGAAGCTTGATCATCTGACATTTACAGCAGAGTAAATAACCCAATAATTTCAATATAATTAAGCAGAGTGTAGGGGTTGTAGTTCATTACACATAACCCAATAATCAAATTGATTCAAGTAGTTTTCCATTCAAGATTCAAATCACTCACTTCACTTTGAATCCTGTCAAGCCACACAGAGAGGAGAAAGCGTACGAATGCTCCATTCAAGAAGATGAAATTGTCCCCAACTTCATTTATCATTTGAATTTCGGATTAGGAACACATTGGAAGCAAGGCGCAGTTAAATCCTACTTGTTAGTTGTCATTTCCATTAATCATGCTGCTCTTGCGTGCTACACGAGTGGGTCGGCACTGCGCACATGTTCATCATTGGCATGCCGGTATCGTTAAGACCGTGACCATGATGAGCTCCCATACCATAAAGCATCATAGGCATCATCGGAGACGGCATATAAGTCATCGGGAAAGTAGCCGGTAAATACATGTTTCCATGTGAATCTGCGCTGTGAGAAGAATCATGTGAGTTCTGCGTCATCGGCATTGGAACGAGAGCCTCGTCGGTCGTTGAGGATATCTGTGTCCTCTTCAAGTAAAGACGATACTTCTGTAAATGACTGGCAACGTTCTCGCGAGTTAATCCATCGACATTCATCAATCGCATAATAGCTTTGGGAGCAGCGTCTTTGAGCCCTAAATGAGAAACCACATCAACGAACCGCTTGTGTAATTGCGGAGTCCAAGCGAGCCTCGGCCGCTTCAAGGTTCGAGCCAACGCCGCATCCTCGATCAAATTCTCCGCTCCAACAAAATCAACCTTCCTCAAATTTCGCGAATCAGATCCCAACTCATCTGGATCAACTGCCTCGTCCGATTCAACCATCAAAGCGTCTTCACCTCGCGTCCTACCGTCATTAAACTCAAAACTTGTATAACCTTCCAATTGTCCATCGCGAATATTCAATATCGTCGTCTTCGACGCCGAATAAACATCCGATTTACTCCGTCGCGGTTCCATCAAAATCCTGAACGCCGAAGCGAGTTCCTGCGGAATCAGCGATTGAGAAAGAGGAGTTAATCTATCAGCATCAGGCAGTCCCTCCTCCCACAGAAGTACTCTTTCATCGCCATTCATACAACCACTACCACCATTACCGTGGTACTCCCTCTTCTTTTGCTCCATAACAAATTCGTCGATTCAGATTCTTCCCCCCCTTCGATTGCACCAAAAATAGGATCAAAATGTCAGTAATCAATCAGCCAACCATATCGCGTAGTAGCTTATTCGATCGATGCATTACATTTTTCAAATGAAGAATGTGTTTGCGAGGCAGGAAAATCAGAGAAAAATTGCGGAAAATTGGGAACACGGTCTCTCACAAGAAAATTCGGCGAGATATTTCTTGATACTATCCAGATTTCCGACACGTGGACTTTGGATATCTACGGCCGTCGACGATTCAACGGTTGAGATCATAATAGCAGCTGATCGCGTACTGCTTTGCATTGGTTGAAGAGCACTAGTCTCGTCACTTTATCCACGTACGAGAGGAAGTTAATGGGCCTGTAAGTGGAAATGAGCCCATTGGGCCCAAATTCATATAGGCCCATCAGGGAAATTATTTATTTATTTATTTAAATTTATTTCTGGAAGTGAAAATACCGGTTTGTAGTCTCTTTACAACGACGAGGACGAAACGATCTTGTGGATCTGGACAGCGAGGATGCGTCTGCCACTGAAGCAGTGAGAGAAAGCGAAGCGCGGCCATGGCTACCACCACATCCACTTCCCTATCGCTACCGATTTTCCTCTCCTCTTCCAATCCAAACTCCTACAAGCTTCCTTCTCTTCGTTCCTCATCTGCATCCTTTGCTTCATCCCTCAATCTCTCTCGCCGACCGGTAGCTCTCGTTCTCATCCAAAATCGTTCAAGACGAGGCTCAATCCGTAGGCTCCATGCCATTTCTGAAGAAACCTTGGCCTCGGAATCCGCCGCGCTGGTGGAGAAATCACAGGAGATAGCATCGACTGGTGACGACGGCGTATCCACCATAATCTCTGTTCTTCTGTTTGTCGCTTTCATCGGTCTATCTGTTCTCACAATCGGGGTAATCTACATTGCTGTGACGGATTTCTTGCAGAAGAGGGAGAAGGAAAAGTTTGAGAAAGAGGAGGCGGCTAACAAGAAGAGCGGAAAGAAGAAGAGGGTGAAGGTGAAGGCCAGAGCTGGACCCAGGGGATTCGGCCAGAAGGTCGAACAAGAAGAGGATTGATGTTATCACCAGCTGTTGATCTTATTCTTGCTCGTTTAATTTTCCATAAATTCAGTTTAATTTGCTGAGTTAGGGCATCCTAAATTTTCTCGTTGGAATTGGAATTGGAATGATCCATCCAGATGAACTCGATTAAATTTTGTTTGATTTTTAATCATCTACCTCGAACGATGAGTAGTTCAACCATTCTAAATTTGGAAAGTTTATGACCTCAGCTAGGATAAGCCTAACATTTTAACTATTTTTCTACTTAAAAGCTAAAAGCTAATTTAAAGGATGAAGGGTAATGTTGCAATTTTTAATTTCA

Coding sequence (CDS)

ATGGCTACCACCACATCCACTTCCCTATCGCTACCGATTTTCCTCTCCTCTTCCAATCCAAACTCCTACAAGCTTCCTTCTCTTCGTTCCTCATCTGCATCCTTTGCTTCATCCCTCAATCTCTCTCGCCGACCGGTAGCTCTCGTTCTCATCCAAAATCGTTCAAGACGAGGCTCAATCCGTAGGCTCCATGCCATTTCTGAAGAAACCTTGGCCTCGGAATCCGCCGCGCTGGTGGAGAAATCACAGGAGATAGCATCGACTGGTGACGACGGCGTATCCACCATAATCTCTGTTCTTCTGTTTGTCGCTTTCATCGGTCTATCTGTTCTCACAATCGGGGTAATCTACATTGCTGTGACGGATTTCTTGCAGAAGAGGGAGAAGGAAAAGTTTGAGAAAGAGGAGGCGGCTAACAAGAAGAGCGGAAAGAAGAAGAGGGTGAAGGTGAAGGCCAGAGCTGGACCCAGGGGATTCGGCCAGAAGGTCGAACAAGAAGAGGATTGA

Protein sequence

MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASSLNLSRRPVALVLIQNRSRRGSIRRLHAISEETLASESAALVEKSQEIASTGDDGVSTIISVLLFVAFIGLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKRVKVKARAGPRGFGQKVEQEED

Homology

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BLAST of Cp4.1LG05g09310 vs. TrEMBL
Match: A0A0A0KFD7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G190230 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-35
Identity = 120/177 (67.80%), Postives = 134/177 (75.71%), Query Frame = 1


Query: 1   MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSAS-FASSLNLSRRPVALVLI---QNRSR 60
           MA+TT  SLSLPI LSSSN     LP+LRSSS+  F  S  L  RP   +L    QNR +
Sbjct: 1   MASTTFISLSLPISLSSSN----LLPTLRSSSSPPFPFSTALFSRPTLPLLNPLRQNRQK 60

Query: 61  RGSIRRLHAI-SEETLASESAALV--EKSQEIA-STGDDGVSTIISVLLFVAFIGLSVLT 120
           + SI R+HA  S++TL S+SAAL+  EKSQEI  ST DDGVSTIISVLLF AFIGLS+LT
Sbjct: 61  QLSISRIHAATSQQTLPSDSAALLAAEKSQEIVGSTNDDGVSTIISVLLFTAFIGLSILT 120

Query: 121 IGVIYIAVTDFLQKREKEKFEKEEAA-NKKSGKKKRVKVKARAGPRGFGQKVEQEED 169
           IGVIYI VTDFLQKREKEKFEKEEA   KKSGKKK  KV+AR GPRGFGQKVE EE+
Sbjct: 121 IGVIYIGVTDFLQKREKEKFEKEEAGKKKKSGKKK--KVRARGGPRGFGQKVEGEEE 171

[Close]

BLAST of Cp4.1LG05g09310 vs. TrEMBL
Match: A0A0B0NUK8_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_23137 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.2e-26
Identity = 86/169 (50.89%), Postives = 115/169 (68.05%), Query Frame = 1


Query: 1   MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASSLNLSRRPVALVLIQNRSRRGSI 60
           MA+ +S  +SLP   S  + +     + +SSS  F SSL+LS +P       ++ +   +
Sbjct: 1   MASISSVPISLPNLPSLPSISKSTSVNTQSSSLLFPSSLSLSTKPTLFHTNSHQKKGRKL 60

Query: 61  RRLHAISEETLASESAALVEKSQEIASTGDDGVSTIISVLLFVAFIGLSVLTIGVIYIAV 120
               A  EE L S+S  L    Q ++STGD+GV+T+I  LLFVAF+ LS+LTIGVIYIAV
Sbjct: 61  WITLATPEEVLPSDSTPLDNSQQIVSSTGDEGVATVIQALLFVAFVALSILTIGVIYIAV 120

Query: 121 TDFLQKREKEKFEKEEAANKKSGKKKRVK-VKARAGPRGFGQKVEQEED 169
            DFL KRE+EKFEKEEAA  KSGKKK+ K V+ARAGPRGFGQK+++++D
Sbjct: 121 QDFLGKREREKFEKEEAARNKSGKKKKKKNVRARAGPRGFGQKLDEDDD 169

[Close]

BLAST of Cp4.1LG05g09310 vs. TrEMBL
Match: D7SKB9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g05110 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.4e-26
Identity = 73/105 (69.52%), Postives = 90/105 (85.71%), Query Frame = 1


Query: 62  RLHAISEETLASESAALVEKSQEIASTGDDGVSTIISVLLFVAFIGLSVLTIGVIYIAVT 121
           R+ A+SE+ L SE   L E SQ+I ST D+GVST+IS LLFVAF+ L++LTIGVIYIAV+
Sbjct: 70  RISAVSEDALPSEVTPL-ENSQQIVSTSDEGVSTVISALLFVAFVALTILTIGVIYIAVS 129

Query: 122 DFLQKREKEKFEKEEAANKKSGKKKRVKVKARAGPRGFGQKVEQE 167
           DFLQKREKEKFEKEE+A KK+GKK+  KV+ARAGPRGFGQK+++E
Sbjct: 130 DFLQKREKEKFEKEESAKKKNGKKR--KVRARAGPRGFGQKIDEE 171

[Close]

BLAST of Cp4.1LG05g09310 vs. TrEMBL
Match: K4BXA4_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.0e-25
Identity = 89/173 (51.45%), Postives = 112/173 (64.74%), Query Frame = 1


Query: 1   MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFAS----SLNLSRRPVALVLIQNRSR 60
           MA +TS SLS  +     NP S   P    S +S  +     ++ S  P++  +I+NR  
Sbjct: 1   MAASTSISLSFLVI----NPKSPLFPPQNQSISSTRNLHIHKIHRSNLPISFKIIRNR-- 60

Query: 61  RGSIRRLHAISEETLASESAALVEKSQEIASTGDDGVSTIISVLLFVAFIGLSVLTIGVI 120
                R+ AISE    SE        Q ++STGDDGVST+I  LL +AF+GLS+LT+GVI
Sbjct: 61  -----RISAISE---LSEVNVAETADQIVSSTGDDGVSTVIQSLLVIAFVGLSILTVGVI 120

Query: 121 YIAVTDFLQKREKEKFEKEEAA-NKKSGKKKRVKVKARAGPRGFGQKVEQEED 169
           YIAVTDFLQKREKEKFEKEEAA  KKSG+K ++  +AR GPRGFGQKVE+ ED
Sbjct: 121 YIAVTDFLQKREKEKFEKEEAAKKKKSGRKGKIVARARGGPRGFGQKVEEAED 159

[Close]

BLAST of Cp4.1LG05g09310 vs. TrEMBL
Match: A0A0D2LXE2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G112100 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 7.2e-24
Identity = 86/170 (50.59%), Postives = 116/170 (68.24%), Query Frame = 1


Query: 1   MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFA-SSLNLSRRPVALVLIQNRSRRGS 60
           MA+ +S  +SLP     S P+  K  S+ + S+     SL+LS +P+      ++ ++GS
Sbjct: 1   MASISSMPISLPNL--PSLPSISKSTSVNTQSSPLLFPSLSLSTKPILFHPNSHQKKKGS 60

Query: 61  IRRLH-AISEETLASESAALVEKSQEIASTGDDGVSTIISVLLFVAFIGLSVLTIGVIYI 120
              +  A  EE L S+S  L    Q ++STGD+GV+T+I  LLFVAF+ LS+LTIGVIYI
Sbjct: 61  KLWITLATPEEVLPSDSTPLDNSQQIVSSTGDEGVATVIQALLFVAFVALSILTIGVIYI 120

Query: 121 AVTDFLQKREKEKFEKEEAANKKSGKKKRVK-VKARAGPRGFGQKVEQEE 168
           AV DFL KRE+EKFEKEEAA  KSGKKK+ K V ARAGPRGFGQK+++++
Sbjct: 121 AVQDFLGKREREKFEKEEAARNKSGKKKKKKNVGARAGPRGFGQKLDEDD 168

[Close]

BLAST of Cp4.1LG05g09310 vs. TAIR10
Match: AT2G29180.1 (AT2G29180.1 unknown protein)

HSP 1 Score: 90.1 bits (222), Expect = 1.4e-18
Identity = 75/173 (43.35%), Postives = 114/173 (65.90%), Query Frame = 1


Query: 1   MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASSLNLSRRPVALVLIQNRSRRGSI 60
           M+ TT+ SLSL    S+  P  ++ P      +  + S++  R+ ++  +++    +  +
Sbjct: 1   MSATTTPSLSL----SNFRPR-FQTPVKGHHISPLSWSVS-RRKILSFRVLRLHQEKTQL 60

Query: 61  RRLHA----ISEETLASESAALVEKSQEIASTGDDGVSTIISVLLFVAFIGLSVLTIGVI 120
            R+ A    IS+E ++S+S++       ++S G DGV+ II VLLFVAF+ L+VLTIGV+
Sbjct: 61  WRVSATPEEISQEIVSSDSSS--SSGAVVSSGGQDGVALIIQVLLFVAFLALTVLTIGVV 120

Query: 121 YIAVTDFLQKREKEKFEKEEAA--NKKSGKKKRVKVKARAGPRGFGQKVEQEE 168
           YI VT+FL KRE+EKFEK+EAA  +KK GKKK   ++ARAGPRGFGQK+E ++
Sbjct: 121 YIGVTEFLGKREREKFEKDEAAKKSKKGGKKK--AMRARAGPRGFGQKIEDDD 163

[Close]

BLAST of Cp4.1LG05g09310 vs. NCBI nr
Match: gi|659128221|ref|XP_008464105.1| (PREDICTED: uncharacterized protein LOC103502067 [Cucumis melo])

HSP 1 Score: 167.2 bits (422), Expect = 2.5e-38
Identity = 124/176 (70.45%), Postives = 138/176 (78.41%), Query Frame = 1


Query: 1   MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSAS-FASSLNLSRRPVALVLI---QNRSR 60
           MA+TTS SLSLPI LSSSN     LP+LRSSS+  F SS  LS RP   +L    QNR +
Sbjct: 1   MASTTSISLSLPISLSSSN----LLPTLRSSSSPPFPSSTALSCRPTLPLLNPLRQNRQK 60

Query: 61  RGSIRRLHAI-SEETLASESAALV-EKSQEIA-STGDDGVSTIISVLLFVAFIGLSVLTI 120
           + S   +HA  SE+TLAS+SAALV EKSQ+I  ST DDGVSTIISVLLF+AFIGLS+LTI
Sbjct: 61  QLSFSSIHAATSEQTLASDSAALVAEKSQDIVGSTNDDGVSTIISVLLFIAFIGLSILTI 120

Query: 121 GVIYIAVTDFLQKREKEKFEKEEAA-NKKSGKKKRVKVKARAGPRGFGQKVEQEED 169
           GVIYI VTDFLQKREKEKFEKEEA   KKSGKKK  KV+AR GPRGFGQKVE+EED
Sbjct: 121 GVIYIGVTDFLQKREKEKFEKEEAGKKKKSGKKK--KVRARDGPRGFGQKVEEEED 170

[Close]

BLAST of Cp4.1LG05g09310 vs. NCBI nr
Match: gi|449450758|ref|XP_004143129.1| (PREDICTED: uncharacterized protein LOC101205908 [Cucumis sativus])

HSP 1 Score: 157.9 bits (398), Expect = 1.5e-35
Identity = 120/177 (67.80%), Postives = 134/177 (75.71%), Query Frame = 1


Query: 1   MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSAS-FASSLNLSRRPVALVLI---QNRSR 60
           MA+TT  SLSLPI LSSSN     LP+LRSSS+  F  S  L  RP   +L    QNR +
Sbjct: 1   MASTTFISLSLPISLSSSN----LLPTLRSSSSPPFPFSTALFSRPTLPLLNPLRQNRQK 60

Query: 61  RGSIRRLHAI-SEETLASESAALV--EKSQEIA-STGDDGVSTIISVLLFVAFIGLSVLT 120
           + SI R+HA  S++TL S+SAAL+  EKSQEI  ST DDGVSTIISVLLF AFIGLS+LT
Sbjct: 61  QLSISRIHAATSQQTLPSDSAALLAAEKSQEIVGSTNDDGVSTIISVLLFTAFIGLSILT 120

Query: 121 IGVIYIAVTDFLQKREKEKFEKEEAA-NKKSGKKKRVKVKARAGPRGFGQKVEQEED 169
           IGVIYI VTDFLQKREKEKFEKEEA   KKSGKKK  KV+AR GPRGFGQKVE EE+
Sbjct: 121 IGVIYIGVTDFLQKREKEKFEKEEAGKKKKSGKKK--KVRARGGPRGFGQKVEGEEE 171

[Close]

BLAST of Cp4.1LG05g09310 vs. NCBI nr
Match: gi|1009114999|ref|XP_015873993.1| (PREDICTED: uncharacterized protein LOC107411001 [Ziziphus jujuba])

HSP 1 Score: 136.3 bits (342), Expect = 4.8e-29
Identity = 96/169 (56.80%), Postives = 119/169 (70.41%), Query Frame = 1


Query: 4   TTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASSLNLS-RRPVALVLIQNRSRRGSIR- 63
           TTS SLS P FLS   P S       +S    AS   +S +R + L     RSRR +I+ 
Sbjct: 3   TTSISLSPPDFLSVPKPKSCLFLRRNNSYLPLASPTTISSKRTIILQYPLQRSRRKNIQI 62

Query: 64  -RLHAISEETLASESAALVEKSQEI-ASTGDDGVSTIISVLLFVAFIGLSVLTIGVIYIA 123
            R++AI +E      A  +E SQ+I +S+GDDGV+  IS+LLF+AFIGLS+LT+G+IYIA
Sbjct: 63  WRIYAIPDEAALPSEANPLENSQQIVSSSGDDGVNYFISILLFIAFIGLSILTVGIIYIA 122

Query: 124 VTDFLQKREKEKFEKEEAANKKSGKKKRVKVKARAGPRGFGQKVEQEED 169
           VTDFLQKREKEKFEKE AA KKSG KK+ KV+ARAGPRGFGQK+E EE+
Sbjct: 123 VTDFLQKREKEKFEKEAAAQKKSGGKKK-KVRARAGPRGFGQKIEAEEE 170

[Close]

BLAST of Cp4.1LG05g09310 vs. NCBI nr
Match: gi|728836091|gb|KHG15534.1| (hypothetical protein F383_23137 [Gossypium arboreum])

HSP 1 Score: 127.9 bits (320), Expect = 1.7e-26
Identity = 86/169 (50.89%), Postives = 115/169 (68.05%), Query Frame = 1


Query: 1   MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASSLNLSRRPVALVLIQNRSRRGSI 60
           MA+ +S  +SLP   S  + +     + +SSS  F SSL+LS +P       ++ +   +
Sbjct: 1   MASISSVPISLPNLPSLPSISKSTSVNTQSSSLLFPSSLSLSTKPTLFHTNSHQKKGRKL 60

Query: 61  RRLHAISEETLASESAALVEKSQEIASTGDDGVSTIISVLLFVAFIGLSVLTIGVIYIAV 120
               A  EE L S+S  L    Q ++STGD+GV+T+I  LLFVAF+ LS+LTIGVIYIAV
Sbjct: 61  WITLATPEEVLPSDSTPLDNSQQIVSSTGDEGVATVIQALLFVAFVALSILTIGVIYIAV 120

Query: 121 TDFLQKREKEKFEKEEAANKKSGKKKRVK-VKARAGPRGFGQKVEQEED 169
            DFL KRE+EKFEKEEAA  KSGKKK+ K V+ARAGPRGFGQK+++++D
Sbjct: 121 QDFLGKREREKFEKEEAARNKSGKKKKKKNVRARAGPRGFGQKLDEDDD 169

[Close]

BLAST of Cp4.1LG05g09310 vs. NCBI nr
Match: gi|1012220267|ref|XP_015935558.1| (PREDICTED: uncharacterized protein LOC107461552 [Arachis duranensis])

HSP 1 Score: 126.7 bits (317), Expect = 3.8e-26
Identity = 89/173 (51.45%), Postives = 120/173 (69.36%), Query Frame = 1


Query: 5   TSTSLSLPIFLSSSNPNSY-----KLPSLRSSSASFASSLNLSRRPVAL----VLIQNRS 64
           TS+S S  +  SS + NSY     +  SL  S    + +L  ++R +      VLI +RS
Sbjct: 3   TSSSQSACLLSSSFHSNSYLFLPTRTRSLPLSLTPVSHNLIQTKRFIIFHDPPVLISHRS 62

Query: 65  RRGSIRRLHAISEETLASESAALVEKSQEIASTGDDGVSTIISVLLFVAFIGLSVLTIGV 124
            R     L A +E+ + S+S A V+ ++E+ S+ DDGVST+IS LLF+AFIGLS+LTIGV
Sbjct: 63  SRVRPTTLSAGAEDIVPSDSTA-VDAAKELVSSNDDGVSTVISALLFIAFIGLSILTIGV 122

Query: 125 IYIAVTDFLQKREKEKFEKEEAANKKSGKKKRVKVKARAGPRGFGQKVEQEED 169
           IY+ VTDFLQKREK+KFEKEEAANK   KKK+  V++RAGPRGFGQK++++ED
Sbjct: 123 IYLGVTDFLQKREKDKFEKEEAANKSGKKKKKKVVRSRAGPRGFGQKIDEDED 174

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g09310 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG05g09310 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFD7_CUCSA	1.1e-35	67.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G190230 PE=4 SV=1	[more]
A0A0B0NUK8_GOSAR	1.2e-26	50.89	Uncharacterized protein OS=Gossypium arboreum GN=F383_23137 PE=4 SV=1	[more]
D7SKB9_VITVI	3.4e-26	69.52	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g05110 PE=4 SV=...	[more]
K4BXA4_SOLLC	5.0e-25	51.45	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
A0A0D2LXE2_GOSRA	7.2e-24	50.59	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G112100 PE=4 SV=1	[more]

BLAST of Cp4.1LG05g09310 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G29180.1	1.4e-18	43.35	unknown protein	[more]

BLAST of Cp4.1LG05g09310 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659128221\|ref\|XP_008464105.1\|	2.5e-38	70.45	PREDICTED: uncharacterized protein LOC103502067 [Cucumis melo]	[more]
gi\|449450758\|ref\|XP_004143129.1\|	1.5e-35	67.80	PREDICTED: uncharacterized protein LOC101205908 [Cucumis sativus]	[more]
gi\|1009114999\|ref\|XP_015873993.1\|	4.8e-29	56.80	PREDICTED: uncharacterized protein LOC107411001 [Ziziphus jujuba]	[more]
gi\|728836091\|gb\|KHG15534.1\|	1.7e-26	50.89	hypothetical protein F383_23137 [Gossypium arboreum]	[more]
gi\|1012220267\|ref\|XP_015935558.1\|	3.8e-26	51.45	PREDICTED: uncharacterized protein LOC107461552 [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009987	cellular process
biological_process	GO:0044767	single-organism developmental process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g09310.1	Cp4.1LG05g09310.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36735	FAMILY NOT NAMED	coord: 6..168 score: 2.9
None	No IPR available	PANTHER	PTHR36735:SF1	SUBFAMILY NOT NAMED	coord: 6..168 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG05g09310	Cucsa.138840	Cucumber (Gy14) v1	cgycpeB0377
Cp4.1LG05g09310	CmaCh20G003870	Cucurbita maxima (Rimu)	cmacpeB584
Cp4.1LG05g09310	CmaCh02G007870	Cucurbita maxima (Rimu)	cmacpeB646
Cp4.1LG05g09310	CmoCh20G004190	Cucurbita moschata (Rifu)	cmocpeB533
Cp4.1LG05g09310	CmoCh02G007870	Cucurbita moschata (Rifu)	cmocpeB595
Cp4.1LG05g09310	Csa6G190230	Cucumber (Chinese Long) v2	cpecuB752
Cp4.1LG05g09310	MELO3C025896	Melon (DHL92) v3.5.1	cpemeB655
Cp4.1LG05g09310	ClCG02G019960	Watermelon (Charleston Gray)	cpewcgB658
Cp4.1LG05g09310	CSPI06G14290	Wild cucumber (PI 183967)	cpecpiB755
Cp4.1LG05g09310	Lsi10G013940	Bottle gourd (USVL1VR-Ls)	cpelsiB588
Cp4.1LG05g09310	MELO3C025896.2	Melon (DHL92) v3.6.1	cpemedB784
Cp4.1LG05g09310	CsaV3_6G016660	Cucumber (Chinese Long) v3	cpecucB0933
Cp4.1LG05g09310	Bhi10G000588	Wax gourd	cpewgoB0943
Cp4.1LG05g09310	CsGy6G014130	Cucumber (Gy14) v2	cgybcpeB855
Cp4.1LG05g09310	Carg26583	Silver-seed gourd	carcpeB1265
Cp4.1LG05g09310	Carg03331	Silver-seed gourd	carcpeB0475

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG05g09310	Cucurbita pepo (Zucchini)	cpecpeB308
Cp4.1LG05g09310	Cucurbita pepo (Zucchini)	cpecpeB401
Cp4.1LG05g09310	Cucurbita pepo (Zucchini)	cpecpeB402
Cp4.1LG05g09310	Cucurbita pepo (Zucchini)	cpecpeB444
Cp4.1LG05g09310	Cucurbita pepo (Zucchini)	cpecpeB480
Cp4.1LG05g09310	Cucumber (Gy14) v1	cgycpeB0460
Cp4.1LG05g09310	Cucurbita maxima (Rimu)	cmacpeB249
Cp4.1LG05g09310	Cucurbita maxima (Rimu)	cmacpeB751
Cp4.1LG05g09310	Cucurbita maxima (Rimu)	cmacpeB752
Cp4.1LG05g09310	Cucurbita maxima (Rimu)	cmacpeB845
Cp4.1LG05g09310	Cucurbita moschata (Rifu)	cmocpeB705
Cp4.1LG05g09310	Cucurbita moschata (Rifu)	cmocpeB706
Cp4.1LG05g09310	Cucurbita moschata (Rifu)	cmocpeB793
Cp4.1LG05g09310	Wild cucumber (PI 183967)	cpecpiB736
Cp4.1LG05g09310	Cucumber (Chinese Long) v2	cpecuB734
Cp4.1LG05g09310	Bottle gourd (USVL1VR-Ls)	cpelsiB615
Cp4.1LG05g09310	Watermelon (Charleston Gray)	cpewcgB684
Cp4.1LG05g09310	Watermelon (97103) v1	cpewmB702
Cp4.1LG05g09310	Watermelon (97103) v1	cpewmB744
Cp4.1LG05g09310	Melon (DHL92) v3.5.1	cpemeB654
Cp4.1LG05g09310	Cucumber (Gy14) v2	cgybcpeB689
Cp4.1LG05g09310	Melon (DHL92) v3.6.1	cpemedB783
Cp4.1LG05g09310	Silver-seed gourd	carcpeB0132
Cp4.1LG05g09310	Silver-seed gourd	carcpeB0232
Cp4.1LG05g09310	Silver-seed gourd	carcpeB0535
Cp4.1LG05g09310	Silver-seed gourd	carcpeB1392
Cp4.1LG05g09310	Cucumber (Chinese Long) v3	cpecucB0913
Cp4.1LG05g09310	Wax gourd	cpewgoB0924