Carg03331 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCACCGCCATATCTTGCAAGCTTCCTAGTCTATCTACGCCGTTTGCTTCATCCTCTACTCTCTCGCCGACGAACATTTCTCGCTCCGAATCCTCTCCGGCAGAATCGTCGAAGAGAATCTCAATTTGGAGGCTCCATGCCACATCTGAGGAAACTTTGGCCTCGGAATCCGCCGCACTGGTGGAGAAATCGAAGGAGATAGTGTCCGGCGTTTCCACCGTAACATCTGTTCTTCTGTTTGTCGCGTTCATCGGTTTATCGATTCTCACGATTGGGGTAAAATCAATGCTCAGATTCGAATCTCGAAGCTGAATTTCCACTGTCACTAATTTCGTTTGTATAGCTGTTGATCTCATCTGTCTAATTAGGGTGTTTCCGGTCTCAGGTAATCTACATTGCTGTGACGGACTTCTTGCAGAAGAGAGAGAAGGAAAAGTTCGAGAAAGAGGAGGCGGCTAACAACAAGAAGAGTGGGAAAAGGAAGAAGATGAAAGCTAAAGCTGGATCGAAAGGATTCGGCCAGAAGATTGAT ATGGCCACCGCCATATCTTGCAAGCTTCCTAGTCTATCTACGCCGTTTGCTTCATCCTCTACTCTCTCGCCGACGAACATTTCTCGCTCCGAATCCTCTCCGGCAGAATCGTCGAAGAGAATCTCAATTTGGAGGCTCCATGCCACATCTGAGGAAACTTTGGCCTCGGAATCCGCCGCACTGGTGGAGAAATCGAAGGAGATAGTGTCCGGCGTTTCCACCGTAACATCTGTTCTTCTGTTTGTCGCGTTCATCGGTTTATCGATTCTCACGATTGGGGTAATCTACATTGCTGTGACGGACTTCTTGCAGAAGAGAGAGAAGGAAAAGTTCGAGAAAGAGGAGGCGGCTAACAACAAGAAGAGTGGGAAAAGGAAGAAGATGAAAGCTAAAGCTGGATCGAAAGGATTCGGCCAGAAGATTGAT ATGGCCACCGCCATATCTTGCAAGCTTCCTAGTCTATCTACGCCGTTTGCTTCATCCTCTACTCTCTCGCCGACGAACATTTCTCGCTCCGAATCCTCTCCGGCAGAATCGTCGAAGAGAATCTCAATTTGGAGGCTCCATGCCACATCTGAGGAAACTTTGGCCTCGGAATCCGCCGCACTGGTGGAGAAATCGAAGGAGATAGTGTCCGGCGTTTCCACCGTAACATCTGTTCTTCTGTTTGTCGCGTTCATCGGTTTATCGATTCTCACGATTGGGGTAATCTACATTGCTGTGACGGACTTCTTGCAGAAGAGAGAGAAGGAAAAGTTCGAGAAAGAGGAGGCGGCTAACAACAAGAAGAGTGGGAAAAGGAAGAAGATGAAAGCTAAAGCTGGATCGAAAGGATTCGGCCAGAAGATTGAT MATAISCKLPSLSTPFASSSTLSPTNISRSESSPAESSKRISIWRLHATSEETLASESAALVEKSKEIVSGVSTVTSVLLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEEAANNKKSGKRKKMKAKAGSKGFGQKID
BLAST of Carg03331 vs. NCBI nr
Match: XP_023532311.1 (uncharacterized protein LOC111794502 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 109.4 bits (272), Expect = 1.0e-20 Identity = 101/145 (69.66%), Postives = 114/145 (78.62%), Query Frame = 0
BLAST of Carg03331 vs. NCBI nr
Match: XP_022148488.1 (uncharacterized protein LOC111017113 [Momordica charantia]) HSP 1 Score: 107.1 bits (266), Expect = 5.1e-20 Identity = 104/165 (63.03%), Postives = 114/165 (69.09%), Query Frame = 0
BLAST of Carg03331 vs. NCBI nr
Match: XP_023007015.1 (uncharacterized protein LOC111499635 [Cucurbita maxima]) HSP 1 Score: 107.1 bits (266), Expect = 5.1e-20 Identity = 102/147 (69.39%), Postives = 113/147 (76.87%), Query Frame = 0
BLAST of Carg03331 vs. NCBI nr
Match: XP_022947295.1 (uncharacterized protein LOC111451198 [Cucurbita moschata]) HSP 1 Score: 102.4 bits (254), Expect = 1.3e-18 Identity = 100/147 (68.03%), Postives = 111/147 (75.51%), Query Frame = 0
BLAST of Carg03331 vs. NCBI nr
Match: XP_008464105.1 (PREDICTED: uncharacterized protein LOC103502067 [Cucumis melo]) HSP 1 Score: 90.9 bits (224), Expect = 3.8e-15 Identity = 91/141 (64.54%), Postives = 106/141 (75.18%), Query Frame = 0
BLAST of Carg03331 vs. TAIR10
Match: AT2G29180.1 (unknown protein) HSP 1 Score: 57.0 bits (136), Expect = 1.1e-08 Identity = 40/111 (36.04%), Postives = 56/111 (50.45%), Query Frame = 0
BLAST of Carg03331 vs. TrEMBL
Match: tr|A0A1S3CM77|A0A1S3CM77_CUCME (uncharacterized protein LOC103502067 OS=Cucumis melo OX=3656 GN=LOC103502067 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.5e-15 Identity = 91/141 (64.54%), Postives = 106/141 (75.18%), Query Frame = 0
BLAST of Carg03331 vs. TrEMBL
Match: tr|A0A059AGZ1|A0A059AGZ1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_J02035 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.2e-14 Identity = 84/146 (57.53%), Postives = 99/146 (67.81%), Query Frame = 0
BLAST of Carg03331 vs. TrEMBL
Match: tr|A0A0A0KFD7|A0A0A0KFD7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190230 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 6.2e-14 Identity = 95/162 (58.64%), Postives = 108/162 (66.67%), Query Frame = 0
BLAST of Carg03331 vs. TrEMBL
Match: tr|A0A2I4HH26|A0A2I4HH26_9ROSI (uncharacterized protein LOC109017722 OS=Juglans regia OX=51240 GN=LOC109017722 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.1e-13 Identity = 81/137 (59.12%), Postives = 96/137 (70.07%), Query Frame = 0
BLAST of Carg03331 vs. TrEMBL
Match: tr|A0A2N9HTA1|A0A2N9HTA1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43434 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.8e-13 Identity = 81/135 (60.00%), Postives = 96/135 (71.11%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |