Cp4.1LG05g08210 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG05g08210
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionProtein transport protein Sec61 subunit beta
LocationCp4.1LG05 : 5129722 .. 5130045 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAGAGGCACGTCTCAATCCCAATCCGCATCATCCTCCACCTCCAGGCCTGGCGTTGTGGCTCCTCGCGGCTCCGCGGCGGCGACGGCTGGTCTTCGCCGTCGCCGTCTCGGCTCCACTTCTGGTGCCGGCACCACTGGACTTGTTTCTGGCGGATCAAGTGGCGGCGGCAACATGCTGAGGTTCTACACTGACGATGCTCCTGGTTTGAAGATTTCTCCGACCGTCGTCCTCGTCGTGAGCCTCTGCTTCATCGGCTTCGTCACTGGCCTCCACGTCTTCGGTAAGCTCTATCGCGCGCGATCCGCCGCGGGAGTTTAA

mRNA sequence

ATGGCTAGAGGCACGTCTCAATCCCAATCCGCATCATCCTCCACCTCCAGGCCTGGCGTTGTGGCTCCTCGCGGCTCCGCGGCGGCGACGGCTGGTCTTCGCCGTCGCCGTCTCGGCTCCACTTCTGGTGCCGGCACCACTGGACTTGTTTCTGGCGGATCAAGTGGCGGCGGCAACATGCTGAGGTTCTACACTGACGATGCTCCTGGTTTGAAGATTTCTCCGACCGTCGTCCTCGTCGTGAGCCTCTGCTTCATCGGCTTCGTCACTGGCCTCCACGTCTTCGGTAAGCTCTATCGCGCGCGATCCGCCGCGGGAGTTTAA

Coding sequence (CDS)

ATGGCTAGAGGCACGTCTCAATCCCAATCCGCATCATCCTCCACCTCCAGGCCTGGCGTTGTGGCTCCTCGCGGCTCCGCGGCGGCGACGGCTGGTCTTCGCCGTCGCCGTCTCGGCTCCACTTCTGGTGCCGGCACCACTGGACTTGTTTCTGGCGGATCAAGTGGCGGCGGCAACATGCTGAGGTTCTACACTGACGATGCTCCTGGTTTGAAGATTTCTCCGACCGTCGTCCTCGTCGTGAGCCTCTGCTTCATCGGCTTCGTCACTGGCCTCCACGTCTTCGGTAAGCTCTATCGCGCGCGATCCGCCGCGGGAGTTTAA

Protein sequence

MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRARSAAGV
BLAST of Cp4.1LG05g08210 vs. Swiss-Prot
Match: SC61B_ARATH (Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana GN=At2g45070 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 8.6e-16
Identity = 52/78 (66.67%), Postives = 60/78 (76.92%), Query Frame = 1

Query: 24  RGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGG--GNMLRFYTDDAPGLKISPTVVLVV 83
           RGSAAATA +RRR+   TSGAG      GG+SGG  G+ML+FYTDDAPGLKISP VVL++
Sbjct: 9   RGSAAATASMRRRK--PTSGAG-----GGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 68

Query: 84  SLCFIGFVTGLHVFGKLY 100
           S+ FI FV  LHV GKLY
Sbjct: 69  SIGFIAFVAVLHVMGKLY 79

BLAST of Cp4.1LG05g08210 vs. Swiss-Prot
Match: SC61B_DICDI (Protein transport protein Sec61 subunit beta OS=Dictyostelium discoideum GN=sec61b PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 4.3e-07
Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 1

Query: 54  SSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRA 102
           + GG +M++FY++DA GLK+ PT VL +SL FI FV  LH+ GK  R+
Sbjct: 14  NKGGNSMMKFYSEDAIGLKVGPTAVLFMSLIFIAFVIILHIMGKYTRS 61

BLAST of Cp4.1LG05g08210 vs. Swiss-Prot
Match: SC61B_PONAB (Protein transport protein Sec61 subunit beta OS=Pongo abelii GN=SEC61B PE=3 SV=3)

HSP 1 Score: 51.2 bits (121), Expect = 8.1e-06
Identity = 38/97 (39.18%), Postives = 50/97 (51.55%), Query Frame = 1

Query: 5   TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFY 64
           T    +  SS   P       +A +T   R+     T  AG T      S+G G M RFY
Sbjct: 5   TPSGTNVGSSGRSPSKAVAARAAGSTVRQRKNASCGTRSAGRTT-----SAGTGGMWRFY 64

Query: 65  TDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRA 102
           T+D+PGLK+ P  VLV+SL FI  V  LH++GK  R+
Sbjct: 65  TEDSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96

BLAST of Cp4.1LG05g08210 vs. Swiss-Prot
Match: SC61B_MOUSE (Protein transport protein Sec61 subunit beta OS=Mus musculus GN=Sec61b PE=1 SV=3)

HSP 1 Score: 51.2 bits (121), Expect = 8.1e-06
Identity = 38/97 (39.18%), Postives = 50/97 (51.55%), Query Frame = 1

Query: 5   TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFY 64
           T    +  SS   P       +A +T   R+     T  AG T      S+G G M RFY
Sbjct: 5   TPSGTNVGSSGRSPSKAVAARAAGSTVRQRKNASCGTRSAGRTT-----SAGTGGMWRFY 64

Query: 65  TDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRA 102
           T+D+PGLK+ P  VLV+SL FI  V  LH++GK  R+
Sbjct: 65  TEDSPGLKVGPVPVLVMSLLFIAAVFMLHIWGKYTRS 96

BLAST of Cp4.1LG05g08210 vs. Swiss-Prot
Match: SC61B_HUMAN (Protein transport protein Sec61 subunit beta OS=Homo sapiens GN=SEC61B PE=1 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 8.1e-06
Identity = 38/97 (39.18%), Postives = 50/97 (51.55%), Query Frame = 1

Query: 5   TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFY 64
           T    +  SS   P       +A +T   R+     T  AG T      S+G G M RFY
Sbjct: 5   TPSGTNVGSSGRSPSKAVAARAAGSTVRQRKNASCGTRSAGRTT-----SAGTGGMWRFY 64

Query: 65  TDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRA 102
           T+D+PGLK+ P  VLV+SL FI  V  LH++GK  R+
Sbjct: 65  TEDSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96

BLAST of Cp4.1LG05g08210 vs. TrEMBL
Match: A0A0A0KHR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G293930 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 3.5e-40
Identity = 96/109 (88.07%), Postives = 102/109 (93.58%), Query Frame = 1

Query: 1   MARGTSQSQSASSS--TSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGG 60
           MARG SQSQS++SS  T+RPGVVAPRGSAAATAGLRRRR GSTS + +TGLV GGSSGGG
Sbjct: 1   MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGG 60

Query: 61  NMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRARSAAGV 108
           NMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKLYRARSAAGV
Sbjct: 61  NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV 109

BLAST of Cp4.1LG05g08210 vs. TrEMBL
Match: M5W0W7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013697mg PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 7.0e-33
Identity = 82/107 (76.64%), Postives = 92/107 (85.98%), Query Frame = 1

Query: 1   MARGTSQSQ-SASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGN 60
           MARGTSQSQ +ASSSTSRPGV+APRGSAAATAG+RRRR+G ++ +G+ G   GGS  G N
Sbjct: 1   MARGTSQSQTTASSSTSRPGVMAPRGSAAATAGMRRRRIGGSTSSGSVGGGGGGSGAGNN 60

Query: 61  MLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRARSAAG 107
           MLRFYTDDAPGLKI+PTVVLV+SLCFIGFVT LHVFGKLY  RS  G
Sbjct: 61  MLRFYTDDAPGLKITPTVVLVMSLCFIGFVTALHVFGKLYLHRSGGG 107

BLAST of Cp4.1LG05g08210 vs. TrEMBL
Match: V7AH75_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G173500g PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.0e-32
Identity = 84/108 (77.78%), Postives = 93/108 (86.11%), Query Frame = 1

Query: 1   MARGTSQSQS-ASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGN 60
           MARG SQSQS AS++T+RPGV+APRGSAAATAG+RRRRLG+ S + + G  SG  SGG N
Sbjct: 1   MARGASQSQSTASAATTRPGVMAPRGSAAATAGMRRRRLGAGSSSASVG--SGSGSGGSN 60

Query: 61  MLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRARSAAGV 108
           MLRFYTDDAPGLKISPTVVLV+SLCFIGFVT LHVFGKLYR RS  GV
Sbjct: 61  MLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYRYRSGVGV 106

BLAST of Cp4.1LG05g08210 vs. TrEMBL
Match: B9SK56_RICCO (Protein transport protein Sec61 subunit beta, putative OS=Ricinus communis GN=RCOM_1401130 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.3e-31
Identity = 81/104 (77.88%), Postives = 88/104 (84.62%), Query Frame = 1

Query: 1   MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNM 60
           M RG+SQSQSASSSTSRPGV APRGSAAATAG+RRRRLGS S +G T   + G     NM
Sbjct: 1   MVRGSSQSQSASSSTSRPGVAAPRGSAAATAGMRRRRLGS-SASGATSTAASGIGNSTNM 60

Query: 61  LRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRARSA 105
           LRFYTDDAPGLKISPTVVLV+SLCFIGFVT LHVFGKLYR++ A
Sbjct: 61  LRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYRSKVA 103

BLAST of Cp4.1LG05g08210 vs. TrEMBL
Match: Q2HSW3_MEDTR (Protein transporter Sec61 subunit beta-like protein OS=Medicago truncatula GN=MTR_2g093770 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.0e-31
Identity = 83/110 (75.45%), Postives = 94/110 (85.45%), Query Frame = 1

Query: 1   MARGTSQSQSASSSTSRP---GVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGG 60
           MA+G SQSQS++S++SRP   G+ APRGSAAATAG+RRRRL  TSG  +T  V GGSSGG
Sbjct: 1   MAKGASQSQSSTSTSSRPGGGGLAAPRGSAAATAGMRRRRL--TSG-NSTASVGGGSSGG 60

Query: 61  GNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRARSAAGV 108
            NMLRFYTDDAPGLKISPTVVLV+SLCFIGFVT LHVFGKLYR ++ AGV
Sbjct: 61  SNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYRYKAGAGV 107

BLAST of Cp4.1LG05g08210 vs. TAIR10
Match: AT5G60460.1 (AT5G60460.1 Preprotein translocase Sec, Sec61-beta subunit protein)

HSP 1 Score: 131.3 bits (329), Expect = 3.5e-31
Identity = 77/108 (71.30%), Postives = 86/108 (79.63%), Query Frame = 1

Query: 1   MARGTSQSQ---SASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGG 60
           MARG+SQSQ   S  SST+RPG+ APRGSAAATAG+RRRRLG   G  + G  SG  SG 
Sbjct: 1   MARGSSQSQQSTSTGSSTARPGLAAPRGSAAATAGMRRRRLGGGGGVSSGG-GSGVGSGS 60

Query: 61  GNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRARSAA 106
            NMLRFYTDDAPGLKISPTVVL++SLCFIGFVT LHVFGKLY  +S +
Sbjct: 61  SNMLRFYTDDAPGLKISPTVVLIMSLCFIGFVTALHVFGKLYLHKSGS 107

BLAST of Cp4.1LG05g08210 vs. TAIR10
Match: AT2G45070.1 (AT2G45070.1 Preprotein translocase Sec, Sec61-beta subunit protein)

HSP 1 Score: 84.3 bits (207), Expect = 4.8e-17
Identity = 52/78 (66.67%), Postives = 60/78 (76.92%), Query Frame = 1

Query: 24  RGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGG--GNMLRFYTDDAPGLKISPTVVLVV 83
           RGSAAATA +RRR+   TSGAG      GG+SGG  G+ML+FYTDDAPGLKISP VVL++
Sbjct: 9   RGSAAATASMRRRK--PTSGAG-----GGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 68

Query: 84  SLCFIGFVTGLHVFGKLY 100
           S+ FI FV  LHV GKLY
Sbjct: 69  SIGFIAFVAVLHVMGKLY 79

BLAST of Cp4.1LG05g08210 vs. TAIR10
Match: AT3G60540.1 (AT3G60540.1 Preprotein translocase Sec, Sec61-beta subunit protein)

HSP 1 Score: 80.1 bits (196), Expect = 9.1e-16
Identity = 49/86 (56.98%), Postives = 57/86 (66.28%), Query Frame = 1

Query: 19  GVVAPRGSAAATAGLRRRR-LGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTV 78
           G    RGSAAATA +RRR+  G +S AG          G G ML+FYTDDAPGLKISP V
Sbjct: 4   GGAPQRGSAAATASMRRRKPAGGSSSAG---------GGAGTMLQFYTDDAPGLKISPNV 63

Query: 79  VLVVSLCFIGFVTGLHVFGKLYRARS 104
           VL++S+ FI FV  LHV GKLY  +S
Sbjct: 64  VLIMSIGFIAFVAVLHVMGKLYFVKS 80

BLAST of Cp4.1LG05g08210 vs. NCBI nr
Match: gi|449463643|ref|XP_004149541.1| (PREDICTED: protein transport protein Sec61 subunit beta [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 5.0e-40
Identity = 96/109 (88.07%), Postives = 102/109 (93.58%), Query Frame = 1

Query: 1   MARGTSQSQSASSS--TSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGG 60
           MARG SQSQS++SS  T+RPGVVAPRGSAAATAGLRRRR GSTS + +TGLV GGSSGGG
Sbjct: 1   MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGG 60

Query: 61  NMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRARSAAGV 108
           NMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKLYRARSAAGV
Sbjct: 61  NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV 109

BLAST of Cp4.1LG05g08210 vs. NCBI nr
Match: gi|659127865|ref|XP_008463929.1| (PREDICTED: protein transport protein Sec61 subunit beta [Cucumis melo])

HSP 1 Score: 171.8 bits (434), Expect = 6.5e-40
Identity = 96/109 (88.07%), Postives = 101/109 (92.66%), Query Frame = 1

Query: 1   MARGTSQSQSASSS--TSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGG 60
           MARG SQSQS++SS  T+RPGVVAPRGSAAATAGLRRRR GSTS   +TGLV GGSSGGG
Sbjct: 1   MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGG 60

Query: 61  NMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRARSAAGV 108
           NMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKLYRARSAAGV
Sbjct: 61  NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV 109

BLAST of Cp4.1LG05g08210 vs. NCBI nr
Match: gi|702476327|ref|XP_010032019.1| (PREDICTED: protein transport protein Sec61 subunit beta [Eucalyptus grandis])

HSP 1 Score: 148.3 bits (373), Expect = 7.7e-33
Identity = 83/111 (74.77%), Postives = 92/111 (82.88%), Query Frame = 1

Query: 1   MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLG-----STSGAGTTGLVSGGSS 60
           MARG+SQSQSASS TSRPG++APRGSAAA AG+RRRRLG     + +G G+ GL  GG  
Sbjct: 1   MARGSSQSQSASSVTSRPGMMAPRGSAAAAAGMRRRRLGGGGGGAAAGGGSGGLSGGGGG 60

Query: 61  GGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRARSAAG 107
           GG NMLRFYTDDAPGLKISPTVVLV+SLCFIGFVT LHVFGKLYR +S  G
Sbjct: 61  GGTNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYRYKSGPG 111

BLAST of Cp4.1LG05g08210 vs. NCBI nr
Match: gi|595830955|ref|XP_007206170.1| (hypothetical protein PRUPE_ppa013697mg [Prunus persica])

HSP 1 Score: 147.9 bits (372), Expect = 1.0e-32
Identity = 82/107 (76.64%), Postives = 92/107 (85.98%), Query Frame = 1

Query: 1   MARGTSQSQ-SASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGN 60
           MARGTSQSQ +ASSSTSRPGV+APRGSAAATAG+RRRR+G ++ +G+ G   GGS  G N
Sbjct: 1   MARGTSQSQTTASSSTSRPGVMAPRGSAAATAGMRRRRIGGSTSSGSVGGGGGGSGAGNN 60

Query: 61  MLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRARSAAG 107
           MLRFYTDDAPGLKI+PTVVLV+SLCFIGFVT LHVFGKLY  RS  G
Sbjct: 61  MLRFYTDDAPGLKITPTVVLVMSLCFIGFVTALHVFGKLYLHRSGGG 107

BLAST of Cp4.1LG05g08210 vs. NCBI nr
Match: gi|593182035|ref|XP_007132194.1| (hypothetical protein PHAVU_011G073900g [Phaseolus vulgaris])

HSP 1 Score: 146.4 bits (368), Expect = 2.9e-32
Identity = 84/108 (77.78%), Postives = 93/108 (86.11%), Query Frame = 1

Query: 1   MARGTSQSQS-ASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGN 60
           MARG SQSQS AS++T+RPGV+APRGSAAATAG+RRRRLG+ S + + G  SG  SGG N
Sbjct: 1   MARGASQSQSTASAATTRPGVMAPRGSAAATAGMRRRRLGAGSSSASVG--SGSGSGGSN 60

Query: 61  MLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRARSAAGV 108
           MLRFYTDDAPGLKISPTVVLV+SLCFIGFVT LHVFGKLYR RS  GV
Sbjct: 61  MLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYRYRSGVGV 106

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
SC61B_ARATH8.6e-1666.67Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana GN=At2g4507... [more]
SC61B_DICDI4.3e-0752.08Protein transport protein Sec61 subunit beta OS=Dictyostelium discoideum GN=sec6... [more]
SC61B_PONAB8.1e-0639.18Protein transport protein Sec61 subunit beta OS=Pongo abelii GN=SEC61B PE=3 SV=3[more]
SC61B_MOUSE8.1e-0639.18Protein transport protein Sec61 subunit beta OS=Mus musculus GN=Sec61b PE=1 SV=3[more]
SC61B_HUMAN8.1e-0639.18Protein transport protein Sec61 subunit beta OS=Homo sapiens GN=SEC61B PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0KHR1_CUCSA3.5e-4088.07Uncharacterized protein OS=Cucumis sativus GN=Csa_6G293930 PE=4 SV=1[more]
M5W0W7_PRUPE7.0e-3376.64Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013697mg PE=4 SV=1[more]
V7AH75_PHAVU2.0e-3277.78Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G173500g PE=4 SV=1[more]
B9SK56_RICCO1.3e-3177.88Protein transport protein Sec61 subunit beta, putative OS=Ricinus communis GN=RC... [more]
Q2HSW3_MEDTR3.0e-3175.45Protein transporter Sec61 subunit beta-like protein OS=Medicago truncatula GN=MT... [more]
Match NameE-valueIdentityDescription
AT5G60460.13.5e-3171.30 Preprotein translocase Sec, Sec61-beta subunit protein[more]
AT2G45070.14.8e-1766.67 Preprotein translocase Sec, Sec61-beta subunit protein[more]
AT3G60540.19.1e-1656.98 Preprotein translocase Sec, Sec61-beta subunit protein[more]
Match NameE-valueIdentityDescription
gi|449463643|ref|XP_004149541.1|5.0e-4088.07PREDICTED: protein transport protein Sec61 subunit beta [Cucumis sativus][more]
gi|659127865|ref|XP_008463929.1|6.5e-4088.07PREDICTED: protein transport protein Sec61 subunit beta [Cucumis melo][more]
gi|702476327|ref|XP_010032019.1|7.7e-3374.77PREDICTED: protein transport protein Sec61 subunit beta [Eucalyptus grandis][more]
gi|595830955|ref|XP_007206170.1|1.0e-3276.64hypothetical protein PRUPE_ppa013697mg [Prunus persica][more]
gi|593182035|ref|XP_007132194.1|2.9e-3277.78hypothetical protein PHAVU_011G073900g [Phaseolus vulgaris][more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
Vocabulary: Cellular Component
TermDefinition
GO:0005784Sec61 translocon complex
Vocabulary: INTERPRO
TermDefinition
IPR016482SecG/Sec61-beta/Sbh
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0031204 posttranslational protein targeting to membrane, translocation
biological_process GO:0006886 intracellular protein transport
biological_process GO:0065009 regulation of molecular function
biological_process GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation
cellular_component GO:0005784 Sec61 translocon complex
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005886 plasma membrane
cellular_component GO:0031205 endoplasmic reticulum Sec complex
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0016788 hydrolase activity, acting on ester bonds
molecular_function GO:0005086 ARF guanyl-nucleotide exchange factor activity
molecular_function GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g08210.1Cp4.1LG05g08210.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016482Protein transport protein SecG/Sec61-beta/SbhPFAMPF03911Sec61_betacoord: 58..96
score: 2.4
NoneNo IPR availablePANTHERPTHR13509:SF4SUBFAMILY NOT NAMEDcoord: 1..104
score: 2.7