Cp4.1LG05g03740 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG05g03740
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	MADS box transcription factor
Location	Cp4.1LG05 : 1658238 .. 1661010 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGAGTAAAAGGGGAAGCATGGAAATGGGTTGCATTTTATTCTGTTTGGTTTCTTTTTTTGGGAGGTTTATATTTTGTTTCCTGAGATTTCCCGAAAAAGAAAGAGATCAGGTTCTTCATCACTTCAAATTCTCTTTCTTCTTCTTCTTATTCTTCTTCTTCTTCTCTTACATTTCTAGGGTTCTTCTAAGCTAAACTCCACCTCCACTACATTCTCCTCCCCAAGGAATCAAACCATTACTTCAATCCCTTTCTTCTCTCTCTTTTCATATCTCAAAAAACCCACCACTTTCAGAGGTGAGCCTTGTAAAAATTTGATTTTGATCCATTTATCCAAATGGGGTTTCATTAAATTCTGTTTTGATTTCTGGGTTTTGATCAATTTTATATTTTTCGTGAGATTTTTGTCCAAATCTGACCTTTATTGTTGAAAAAGGAAGCAACTTTGAGAGAAAGGAAAGGAAAAGAAAAATGGTGAGGGGAAAAACCCAAATGAAGCGCATAGAGAATGCTACAAGCCGGCAAGTGACCTTCTCAAAGCGGAGAAATGGGCTGCTGAAGAAGGCCTTTGAGCTATCAGTTCTTTGTGATGCTGAAGTTGCTCTTATCATTTTCTCTCCAAGAGGCAAACTTTATGAGTTTTCAAATTGCAGGTACTTTTTTCCTTCCTTTATTTACAAAAACCTCTCTTCAAATCTCTCAAATCACCGTCCTTTTGGGGTTAATTCTTAATTAACTTGTGTGTTTGTTTGTTTTCTTTTGGGCACTGTCTATTTCCCTTGGCTCTTCTATTTCTTTCTCTCTTTGCAATCAAATTAGTACTGCCGTCCTTCTCTTATTTACCTAACCCCAACAAGATTTGCATTAATGGGTCACTGCCTTAAACTCATTTCAAATCTTTTTTACTGTTCTTCCTGATCTAGGGCTTATCTGGGGACAACATTATTTTGTTTGTTTCTTCTTGAGTAATTGAGGATCACTTTGTAAATTTGTTTTTGAACAATTTTAAAAAATAAATTTTGTATATTTTCAATGTATGTTCATAATATTTCATGTTATAAACTTATTCTAGTTTTGTTGTATTCAACTGATGCATAATAATAATAATCATCATAAGGCTTAGAATCAAAAGTAGTCCTTAAAAGGAATGAAATTTCTCTATCTCCAAGGTCATTCTCAGGCTTTGTAGATGAACAAAAAAAAAAATAATAATTTAAGCAAATGCTAGGCTATCCAAAAATAGGAAGCTATAAGAACTTTAATAGGGACATGATTAAGAACATTTAGCTTCAGAATCCAATGGGAGATCAAATTTCACGATGCCCCATTTGGTTATTTAATTCCACGCATGGCTTTGAAGGTCATATCCCAATGAACATGGGAAATCTTGGTCGTTCATTTTAAACTAACCCTTTGATTAAAGTTCCAATCTTTCCAATGAACAAAGTTTGAATGTGTGGTAATTGGATTAAAATTGGATTAAAATGAGTAATTAATATTAAGTTCTAAGTCTTAATGTGGAGTTAATTTTGTTGTTGGGATGGAGATGTTTCAGTATGAACAAGACAATTGATCGGTATCAGAACAGAACCAAAGAAATTATGTGTACAAACAACCAAGGTTTAGAAGATGTGCAGGTTGGTTGATTCTCAAACACATTCATGTTTGTGGTTCCTTATAAGCATCGAAAATCAAACAGAAACAAAAACATATCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTGTTTGGATTGGAAGTTGGAGAAGGAATTTGACTCATTTACCATGACTAAGAAGTTACAGCACCTTGAAGTCTGTAAAAGGTTTGAGATTATTTTGAAGAACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANTACATATTTATTAATCTACAAACATGCTGAAGCTCTCATGAAATAGTACAGAAAATTGATGGGAGATAGCTTGGATTTGTGCTCCATGGAAGAGTTGCAGCAGCTTGAAAGGCAAATTGAAAGAAGCTTAACAAAAATTAGGTCAAGAAAGGTACATTCATGTCTCAGATTCTAAAACATTTCCCCTTTTTAGATTTGTTCTTATTTTGTTTCAATTTCAGTATCAATTACTGAAGGAAGAAATTACGAAGCTGAAGGAAGAGGTAATTTTCATTACATTATTTACATAAATGAATTAAAACTATTGGTGATTTGAATTTTGATTTGGTGAATAGGAGAAAATGTTGCTGGAAGAAAATGCAGCTCTCTTGAAAAAGGTTAAGCAATCTTTTTTGTTTTGATTAATGTCAATTTCCTTAGAACTGTTCCTCGTACAAATAATCCATAAAATTCAAACAAGAAAATGAATGTTTTTTCAGGTTGGAAGTGAATGGAAGCACCAAGATGAGGCCATGGATGTTGAGACCCAACTGTTCATAGGGCCATCAGATAGAAGAGGCGGCAGTGGCTTCCTGTGTAGATATCTTCACAATCAACCCACTTAATAAAGACACAAGCTTTGTGTTGAACCCCAAAAAAAGGTGAGTTTTTTACATGCAGTATTAACACTAAAAGTGAAACCAAAAAAATTGGTTTCTGATAAAATGTTTGATTAAATACTGTTACGAGGAATCAAACTATCTGTATATTTAGGAAGTGTTCCTTGTCGGATAATGTTGTTTTGTACTTGGTTTTTCCATGTGGTTTCAGTGCATAACATGTTTGTGTTTCTCTTTTTATGGTTACTTTGCTTTAAAAAAAAATGTGGAAATTTGGTGG

mRNA sequence

GGAGAGTAAAAGGGGAAGCATGGAAATGGGTTGCATTTTATTCTGTTTGGTTTCTTTTTTTGGGAGGGTTCTTCTAAGCTAAACTCCACCTCCACTACATTCTCCTCCCCAAGGAATCAAACCATTACTTCAATCCCTTTCTTCTCTCTCTTTTCATATCTCAAAAAACCCACCACTTTCAGAGGAAGCAACTTTGAGAGAAAGGAAAGGAAAAGAAAAATGGTGAGGGGAAAAACCCAAATGAAGCGCATAGAGAATGCTACAAGCCGGCAAGTGACCTTCTCAAAGCGGAGAAATGGGCTGCTGAAGAAGGCCTTTGAGCTATCAGTTCTTTGTGATGCTGAAGTTGCTCTTATCATTTTCTCTCCAAGAGGCAAACTTTATGAGTTTTCAAATTGCAGTATGAACAAGACAATTGATCGGTATCAGAACAGAACCAAAGAAATTATGTGTACAAACAACCAAGGTTTAGAAGATGTGCAGTTGGAGAAGGAATTTGACTCATTTACCATGACTAAGAAGTTACAGCACCTTGAAGTCTGTAAAAGAAAATTGATGGGAGATAGCTTGGATTTGTGCTCCATGGAAGAGTTGCAGCAGCTTGAAAGGCAAATTGAAAGAAGCTTAACAAAAATTAGGTCAAGAAAGTATCAATTACTGAAGGAAGAAATTACGAAGCTGAAGGAAGAGGAGAAAATGTTGCTGGAAGAAAATGCAGCTCTCTTGAAAAAGGTTGGAAGTGAATGGAAGCACCAAGATGAGGCCATGGATGTTGAGACCCAACTGTTCATAGGGCCATCAGATAGAAGAGGCGGCAGTGGCTTCCTGTGTAGATATCTTCACAATCAACCCACTTAATAAAGACACAAGCTTTGTGTTGAACCCCAAAAAAAGGTGAGTTTTTTACATGCAGTATTAACACTAAAAGTGAAACCAAAAAAATTGGTTTCTGATAAAATGTTTGATTAAATACTGTTACGAGGAATCAAACTATCTGTATATTTAGGAAGTGTTCCTTGTCGGATAATGTTGTTTTGTACTTGGTTTTTCCATGTGGTTTCAGTGCATAACATGTTTGTGTTTCTCTTTTTATGGTTACTTTGCTTTAAAAAAAAATGTGGAAATTTGGTGG

Coding sequence (CDS)

ATGGTGAGGGGAAAAACCCAAATGAAGCGCATAGAGAATGCTACAAGCCGGCAAGTGACCTTCTCAAAGCGGAGAAATGGGCTGCTGAAGAAGGCCTTTGAGCTATCAGTTCTTTGTGATGCTGAAGTTGCTCTTATCATTTTCTCTCCAAGAGGCAAACTTTATGAGTTTTCAAATTGCAGTATGAACAAGACAATTGATCGGTATCAGAACAGAACCAAAGAAATTATGTGTACAAACAACCAAGGTTTAGAAGATGTGCAGTTGGAGAAGGAATTTGACTCATTTACCATGACTAAGAAGTTACAGCACCTTGAAGTCTGTAAAAGAAAATTGATGGGAGATAGCTTGGATTTGTGCTCCATGGAAGAGTTGCAGCAGCTTGAAAGGCAAATTGAAAGAAGCTTAACAAAAATTAGGTCAAGAAAGTATCAATTACTGAAGGAAGAAATTACGAAGCTGAAGGAAGAGGAGAAAATGTTGCTGGAAGAAAATGCAGCTCTCTTGAAAAAGGTTGGAAGTGAATGGAAGCACCAAGATGAGGCCATGGATGTTGAGACCCAACTGTTCATAGGGCCATCAGATAGAAGAGGCGGCAGTGGCTTCCTGTGTAGATATCTTCACAATCAACCCACTTAA

Protein sequence

MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNCSMNKTIDRYQNRTKEIMCTNNQGLEDVQLEKEFDSFTMTKKLQHLEVCKRKLMGDSLDLCSMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKVGSEWKHQDEAMDVETQLFIGPSDRRGGSGFLCRYLHNQPT

Homology

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BLAST of Cp4.1LG05g03740 vs. Swiss-Prot
Match: AGL19_ARATH (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 7.5e-56
Identity = 125/217 (57.60%), Postives = 157/217 (72.35%), Query Frame = 1


Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGKT+MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAL+IFSPR KLYEFS+ 
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSS 60

Query: 61  SMNKTIDRYQNRTKEIMCTNNQGLEDVQLEKEFDSFTMTKKLQHLEVCKRKLMGDSLDLC 120
           S+  TI+RYQ R KEI   NN    D   +   ++  +TKK++ LE+ KRKL+G+ +D C
Sbjct: 61  SIAATIERYQRRIKEI--GNNHKRNDNSQQARDETSGLTKKIEQLEISKRKLLGEGIDAC 120

Query: 121 SMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKK--------- 180
           S+EELQQLE Q++RSL++IR++KYQLL+EEI KLK EE+ L++EN  L +K         
Sbjct: 121 SIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEKWLGMGTATI 180

Query: 181 ------VGSEWKHQDEAMDVETQLFIGPSDRRGGSGF 203
                 + S   + D+ M+VET LFIGP + R    F
Sbjct: 181 ASSQSTLSSSEVNIDDNMEVETGLFIGPPETRQSKKF 215

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BLAST of Cp4.1LG05g03740 vs. Swiss-Prot
Match: AGL14_ARATH (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=1 SV=2)

HSP 1 Score: 209.1 bits (531), Expect = 4.6e-53
Identity = 121/214 (56.54%), Postives = 156/214 (72.90%), Query Frame = 1


Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEF-SN 60
           MVRGKT+MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEF S+
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60

Query: 61  CSMNKTIDRYQNRTKEIMCTNNQGLEDVQLEKEFDSFTMTKKLQHLEVCKRKLMGDSLDL 120
            S+ KT++RYQ R +++   +N    D   + + +++ + +K++HLE+  RK+MG+ LD 
Sbjct: 61  SSIPKTVERYQKRIQDL--GSNHKRNDNSQQSKDETYGLARKIEHLEISTRKMMGEGLDA 120

Query: 121 CSMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKK-------- 180
            S+EELQQLE Q++RSL KIR++KYQLL+EE  KLKE+E+ L+ EN  L++K        
Sbjct: 121 SSIEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKMLMEKCEMQGRGI 180

Query: 181 VG--------SEWKHQDEAMDVETQLFIGPSDRR 198
           +G        SE    D  M+V T LFIGP + R
Sbjct: 181 IGRISSSSSTSELDIDDNEMEVVTDLFIGPPETR 212

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BLAST of Cp4.1LG05g03740 vs. Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 9.5e-51
Identity = 115/208 (55.29%), Postives = 152/208 (73.08%), Query Frame = 1


Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEV+LIIFSP+GKLYEF++ 
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60

Query: 61  SMNKTIDRYQNRTKEIMCTNNQGLEDVQLEKEFDSFTMTKKLQHLEVCKRKLMGDSLDLC 120
           +M  TIDRY   TK+ + T     E++Q   ++++  M KK++ LE  KRKL+G+ +  C
Sbjct: 61  NMQDTIDRYLRHTKDRVSTKPVSEENMQ-HLKYEAANMMKKIEQLEASKRKLLGEGIGTC 120

Query: 121 SMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKVGSE----W 180
           S+EELQQ+E+Q+E+S+  IR+RK Q+ KE+I +LK++EK L  EN  L +K GS     W
Sbjct: 121 SIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEKWGSHESEVW 180

Query: 181 KHQDE------------AMDVETQLFIG 193
            ++++            + +VETQLFIG
Sbjct: 181 SNKNQESTGRGDEESSPSSEVETQLFIG 207

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BLAST of Cp4.1LG05g03740 vs. Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.2e-48
Identity = 123/223 (55.16%), Postives = 152/223 (68.16%), Query Frame = 1


Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGKTQMKRIEN TSRQVTFSKRRNGLLKKAFELSVLCDAEVALI+FSPRGKLYEF++ 
Sbjct: 1   MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA 60

Query: 61  SMNKTIDRYQNRTKEIMCTNNQGLEDVQLEKE---FDSFTMTKKLQHLEVCKRKLMGDSL 120
           S  KTI+RY+  TKE     N G + VQ + E    D+  + KKL+ LE  KRKL+G+ L
Sbjct: 61  STQKTIERYRTYTKE-----NIGNKTVQQDIEQVKADADGLAKKLEALETYKRKLLGEKL 120

Query: 121 DLCSMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKK------ 180
           D CS+EEL  LE ++ERSL  IR RK +LL+E++ KL+E+E  L ++N  L +K      
Sbjct: 121 DECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELREKCKNQPP 180

Query: 181 ------VGSEWKHQD-------EAMDVETQLFIGPSDRRGGSG 202
                 V +E ++ D       + MDVET+LFIG   R   SG
Sbjct: 181 LSAPLTVRAEDENPDRNINTTNDNMDVETELFIGLPGRSRSSG 218

[Close]

BLAST of Cp4.1LG05g03740 vs. Swiss-Prot
Match: AGL42_ARATH (MADS-box protein AGL42 OS=Arabidopsis thaliana GN=AGL42 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.2e-46
Identity = 112/209 (53.59%), Postives = 146/209 (69.86%), Query Frame = 1


Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGK +MK+IENATSRQVTFSKRRNGLLKKA+ELSVLCDA+++LIIFS RG+LYEFS+ 
Sbjct: 1   MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 61  SMNKTIDRYQNRTKEIMCTNNQGLEDVQLEKEFDSFTMTKKLQHLEVCKRKLMGDSLDLC 120
            M KTI+RY+  TK+   +N+     +Q  K+  S  +T K++ LE  KRKL+G  +  C
Sbjct: 61  DMQKTIERYRKYTKDHETSNHDSQIHLQQLKQEASHMIT-KIELLEFHKRKLLGQGIASC 120

Query: 121 SMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKK------VGS 180
           S+EELQ+++ Q++RSL K+R RK QL KE++ KLK +EK LLEEN  L +K       GS
Sbjct: 121 SLEELQEIDSQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEENVKLHQKNVINPWRGS 180

Query: 181 EWKHQDEA-------MDVETQLFIGPSDR 197
               Q E        ++VET LFIG  +R
Sbjct: 181 STDQQQEKYKVIDLNLEVETDLFIGLPNR 208

[Close]

BLAST of Cp4.1LG05g03740 vs. TrEMBL
Match: A0A067K164_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20695 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.5e-58
Identity = 133/208 (63.94%), Postives = 163/208 (78.37%), Query Frame = 1


Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRG+LYEFS+C
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGRLYEFSSC 60

Query: 61  SMNKTIDRYQNRTKEIMCTNNQGLEDVQLEKEFDSFTMTKKLQHLEVCKRKLMGDSLDLC 120
           SMNKTI+RYQ +  ++  +     E++Q  KE D+ ++ KK++HLEV KRK++GD L+ C
Sbjct: 61  SMNKTIERYQKKVIDLGISIKAVQENMQNIKE-DTLSLGKKIEHLEVSKRKMLGDGLEPC 120

Query: 121 SMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKVG------S 180
            ++ELQQLE Q+ERSLT+IR+RK QL +E I KL+EEEK+LLEEN +L +K G      S
Sbjct: 121 PIDELQQLENQLERSLTRIRARKGQLFRERIEKLREEEKILLEENTSLREKCGMQPMELS 180

Query: 181 EWKHQ-----DEAMDVETQLFIGPSDRR 198
             K Q      E+M+VET LFIGP + R
Sbjct: 181 TKKQQIQVADRESMEVETALFIGPPETR 207

[Close]

BLAST of Cp4.1LG05g03740 vs. TrEMBL
Match: C3PTE7_POPTO (MADS box transcription factor OS=Populus tomentosa GN=MADS3 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.8e-57
Identity = 127/208 (61.06%), Postives = 160/208 (76.92%), Query Frame = 1


Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELS+LCDAEVALI+FS RGKLYEFS+ 
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSILCDAEVALIVFSTRGKLYEFSSS 60

Query: 61  SMNKTIDRYQNRTKEIMCTNNQGLEDVQLEKEFDSFTMTKKLQHLEVCKRKLMGDSLDLC 120
           SMN+TI+RYQ R K++  ++    +++Q  KE D+FT+ KK+  LEV KRKL+GD L+ C
Sbjct: 61  SMNRTIERYQKRAKDVGISSRMVKDNMQPVKE-DAFTLAKKIDILEVSKRKLLGDGLEQC 120

Query: 121 SMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKVG------- 180
           S+++LQQLE Q+ERSLT+IR+RK QL +E+I KLK EEK+L+EEN  L +K G       
Sbjct: 121 SIDDLQQLENQLERSLTRIRARKNQLFREQIEKLKGEEKILMEENTKLREKCGMQPLDLQ 180

Query: 181 ----SEWKHQDEAMDVETQLFIGPSDRR 198
                +     + ++VET+LFIGP D R
Sbjct: 181 ATKTPQILQDRQIIEVETELFIGPPDSR 207

[Close]

BLAST of Cp4.1LG05g03740 vs. TrEMBL
Match: B9GW46_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s11960g PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.0e-55
Identity = 128/208 (61.54%), Postives = 159/208 (76.44%), Query Frame = 1


Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALI+FS RGKLYEFS+ 
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSSRGKLYEFSSS 60

Query: 61  SMNKTIDRYQNRTKEIMCTNNQGLEDVQLEKEFDSFTMTKKLQHLEVCKRKLMGDSLDLC 120
           S+N+TI+RYQ R K++  ++    +++Q  KE D+FT+ KK++ LEV KRKL+G+ L+ C
Sbjct: 61  SINRTIERYQKRAKDVGISSKMVQDNIQPVKE-DTFTLAKKIELLEVSKRKLLGEGLETC 120

Query: 121 SMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKVG------- 180
           S ++LQQLE Q+ RSLT+IR+RK QL +E I KLK EEK+LLEEN  L +K G       
Sbjct: 121 STDDLQQLENQLGRSLTRIRARKNQLFRERIEKLKGEEKILLEENTRLREKCGMQQPDLS 180

Query: 181 SEWKHQ----DEAMDVETQLFIGPSDRR 198
           S  K Q     +  +VET+LFIGP + R
Sbjct: 181 STRKQQLLEDRQITEVETELFIGPPETR 207

[Close]

BLAST of Cp4.1LG05g03740 vs. TrEMBL
Match: A0A0U2VU03_CAMSI (SOC1 OS=Camellia sinensis GN=SOC1 PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 5.8e-55
Identity = 126/209 (60.29%), Postives = 161/209 (77.03%), Query Frame = 1


Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGKTQMKRIENATSRQVTFSKRR+GLLKKAFELSVLCDAEVALIIFSP+GKLYEFSN 
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIIFSPKGKLYEFSNS 60

Query: 61  SMNKTIDRYQNRTKEIMCTNNQGLEDVQLEKEFDSFTMTKKLQHLEVCKRKLMGDSLDLC 120
           S+NKTIDRYQ   K++  +NN   E++Q  KE ++ ++++K++ L+V KRKL+GD L+  
Sbjct: 61  SINKTIDRYQKNAKDLGSSNNAAQENLQHLKE-EAVSLSEKIELLQVSKRKLLGDGLESS 120

Query: 121 SMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKV-------- 180
            ++ELQQ++ QIE+SL+KIR+RK Q+ KE+I +LKEEE++L EENA L +K+        
Sbjct: 121 CIDELQQVQDQIEQSLSKIRARKTQVFKEKIEQLKEEERILTEENAKLREKLKCDQMELP 180

Query: 181 ----GSEWKHQDEAMDVETQLFIGPSDRR 198
                 E   Q E  DVET+LFIGP D +
Sbjct: 181 CLAFAQEVPTQREISDVETELFIGPPDEQ 208

[Close]

BLAST of Cp4.1LG05g03740 vs. TrEMBL
Match: A0A087HAW1_ARAAL (Mads box agl protein OS=Arabis alpina GN=AALP_AA3G221600 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.3e-54
Identity = 125/213 (58.69%), Postives = 154/213 (72.30%), Query Frame = 1


Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGKT+MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAL++FSPR KLYEFS+ 
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRSKLYEFSSS 60

Query: 61  SMNKTIDRYQNRTKEIMCTNNQGLEDVQLEKEFDSFTMTKKLQHLEVCKRKLMGDSLDLC 120
           S+ KTI+RYQ R KEI  ++ +     Q   E     +TKK++ LE+ KRKL G+ +D C
Sbjct: 61  SIAKTIERYQKRIKEIGSSHKRDNNSQQARDETQG--LTKKIEQLEISKRKLHGEGIDAC 120

Query: 121 SMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKV-------- 180
           S+EELQQLE Q++RSLT+IR++KYQLL+E+I KLKEEE+ L++EN  L +K         
Sbjct: 121 SIEELQQLENQLDRSLTRIRAKKYQLLREQIEKLKEEERKLIKENKELKEKCRGMGAMVV 180

Query: 181 --------GSEWKHQDEAMDVETQLFIGPSDRR 198
                    SE    D  M+VET LFIGP + R
Sbjct: 181 ASSSSTPSSSEMNIDDNDMEVETGLFIGPPETR 211

[Close]

BLAST of Cp4.1LG05g03740 vs. TAIR10
Match: AT4G22950.1 (AT4G22950.1 AGAMOUS-like 19)

HSP 1 Score: 218.4 bits (555), Expect = 4.3e-57
Identity = 125/217 (57.60%), Postives = 157/217 (72.35%), Query Frame = 1


Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGKT+MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAL+IFSPR KLYEFS+ 
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSS 60

Query: 61  SMNKTIDRYQNRTKEIMCTNNQGLEDVQLEKEFDSFTMTKKLQHLEVCKRKLMGDSLDLC 120
           S+  TI+RYQ R KEI   NN    D   +   ++  +TKK++ LE+ KRKL+G+ +D C
Sbjct: 61  SIAATIERYQRRIKEI--GNNHKRNDNSQQARDETSGLTKKIEQLEISKRKLLGEGIDAC 120

Query: 121 SMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKK--------- 180
           S+EELQQLE Q++RSL++IR++KYQLL+EEI KLK EE+ L++EN  L +K         
Sbjct: 121 SIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEKWLGMGTATI 180

Query: 181 ------VGSEWKHQDEAMDVETQLFIGPSDRRGGSGF 203
                 + S   + D+ M+VET LFIGP + R    F
Sbjct: 181 ASSQSTLSSSEVNIDDNMEVETGLFIGPPETRQSKKF 215

[Close]

BLAST of Cp4.1LG05g03740 vs. TAIR10
Match: AT4G11880.1 (AT4G11880.1 AGAMOUS-like 14)

HSP 1 Score: 209.1 bits (531), Expect = 2.6e-54
Identity = 121/214 (56.54%), Postives = 156/214 (72.90%), Query Frame = 1


Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEF-SN 60
           MVRGKT+MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEF S+
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60

Query: 61  CSMNKTIDRYQNRTKEIMCTNNQGLEDVQLEKEFDSFTMTKKLQHLEVCKRKLMGDSLDL 120
            S+ KT++RYQ R +++   +N    D   + + +++ + +K++HLE+  RK+MG+ LD 
Sbjct: 61  SSIPKTVERYQKRIQDL--GSNHKRNDNSQQSKDETYGLARKIEHLEISTRKMMGEGLDA 120

Query: 121 CSMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKK-------- 180
            S+EELQQLE Q++RSL KIR++KYQLL+EE  KLKE+E+ L+ EN  L++K        
Sbjct: 121 SSIEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKMLMEKCEMQGRGI 180

Query: 181 VG--------SEWKHQDEAMDVETQLFIGPSDRR 198
           +G        SE    D  M+V T LFIGP + R
Sbjct: 181 IGRISSSSSTSELDIDDNEMEVVTDLFIGPPETR 212

[Close]

BLAST of Cp4.1LG05g03740 vs. TAIR10
Match: AT2G45660.1 (AT2G45660.1 AGAMOUS-like 20)

HSP 1 Score: 201.4 bits (511), Expect = 5.4e-52
Identity = 115/208 (55.29%), Postives = 152/208 (73.08%), Query Frame = 1


Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEV+LIIFSP+GKLYEF++ 
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60

Query: 61  SMNKTIDRYQNRTKEIMCTNNQGLEDVQLEKEFDSFTMTKKLQHLEVCKRKLMGDSLDLC 120
           +M  TIDRY   TK+ + T     E++Q   ++++  M KK++ LE  KRKL+G+ +  C
Sbjct: 61  NMQDTIDRYLRHTKDRVSTKPVSEENMQ-HLKYEAANMMKKIEQLEASKRKLLGEGIGTC 120

Query: 121 SMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKVGSE----W 180
           S+EELQQ+E+Q+E+S+  IR+RK Q+ KE+I +LK++EK L  EN  L +K GS     W
Sbjct: 121 SIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEKWGSHESEVW 180

Query: 181 KHQDE------------AMDVETQLFIG 193
            ++++            + +VETQLFIG
Sbjct: 181 SNKNQESTGRGDEESSPSSEVETQLFIG 207

[Close]

BLAST of Cp4.1LG05g03740 vs. TAIR10
Match: AT5G62165.1 (AT5G62165.1 AGAMOUS-like 42)

HSP 1 Score: 186.4 bits (472), Expect = 1.8e-47
Identity = 112/209 (53.59%), Postives = 146/209 (69.86%), Query Frame = 1


Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGK +MK+IENATSRQVTFSKRRNGLLKKA+ELSVLCDA+++LIIFS RG+LYEFS+ 
Sbjct: 1   MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 61  SMNKTIDRYQNRTKEIMCTNNQGLEDVQLEKEFDSFTMTKKLQHLEVCKRKLMGDSLDLC 120
            M KTI+RY+  TK+   +N+     +Q  K+  S  +T K++ LE  KRKL+G  +  C
Sbjct: 61  DMQKTIERYRKYTKDHETSNHDSQIHLQQLKQEASHMIT-KIELLEFHKRKLLGQGIASC 120

Query: 121 SMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKK------VGS 180
           S+EELQ+++ Q++RSL K+R RK QL KE++ KLK +EK LLEEN  L +K       GS
Sbjct: 121 SLEELQEIDSQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEENVKLHQKNVINPWRGS 180

Query: 181 EWKHQDEA-------MDVETQLFIGPSDR 197
               Q E        ++VET LFIG  +R
Sbjct: 181 STDQQQEKYKVIDLNLEVETDLFIGLPNR 208

[Close]

BLAST of Cp4.1LG05g03740 vs. TAIR10
Match: AT5G51860.1 (AT5G51860.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 156.4 bits (394), Expect = 2.0e-38
Identity = 98/205 (47.80%), Postives = 129/205 (62.93%), Query Frame = 1


Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGK ++K+IEN TSRQVTFSKRR+GL KKA ELSVLCDA+VA +IFS +G+LYEF++ 
Sbjct: 1   MVRGKIEIKKIENVTSRQVTFSKRRSGLFKKAHELSVLCDAQVAAMIFSQKGRLYEFASS 60

Query: 61  SMNKTIDRYQNRTKEIMCTNNQGLEDVQLEKEFDSFTMTKKLQHLEVCKRKLMGDSLDLC 120
            +  TI RY    +E        +E      + +  TM KK++ LEV  RK+MG SLD C
Sbjct: 61  DIRNTIKRYAEYKREYFVAETHPIEQYVQGLKKEMVTMVKKIEVLEVHNRKMMGQSLDSC 120

Query: 121 SMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAAL-LKK-------- 180
           S++EL ++  QIE+SL  +R RK +L ++E+ KLK +E+ L +E   L LKK        
Sbjct: 121 SVKELSEIATQIEKSLHMVRLRKAKLYEDELQKLKAKERELKDERVRLSLKKTIYTHLCQ 180

Query: 181 VGSE----WKHQDEAMDVETQLFIG 193
           VG           E  DVET LFIG
Sbjct: 181 VGERPMGMPSGSKEKEDVETDLFIG 205

[Close]

BLAST of Cp4.1LG05g03740 vs. NCBI nr
Match: gi|778699809|ref|XP_011654776.1| (PREDICTED: agamous-like MADS-box protein AGL19 [Cucumis sativus])

HSP 1 Score: 310.5 bits (794), Expect = 2.3e-81
Identity = 165/212 (77.83%), Postives = 185/212 (87.26%), Query Frame = 1


Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60

Query: 61  SMNKTIDRYQNRTKEIMCTNNQGLEDVQLEKEFDSFTMTKKLQHLEVCKRKLMGDSLDLC 120
           SMNKTIDRYQNRTK++M +N+  +EDVQLEKE+DSF+MTKKL+HLEVCKRKL+GD LDLC
Sbjct: 61  SMNKTIDRYQNRTKDLMSSNSTAIEDVQLEKEYDSFSMTKKLEHLEVCKRKLLGDGLDLC 120

Query: 121 SMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKV-------- 180
           S++ELQQLERQ+ERSL+KIRSRKYQ+LK+EI KLKEEEKMLLEENAAL  KV        
Sbjct: 121 SIDELQQLERQLERSLSKIRSRKYQMLKDEIMKLKEEEKMLLEENAALQIKVISESSKKQ 180

Query: 181 ----GSEWKHQDEAMDVETQLFIGPSDRRGGS 201
                SE  + +E MDVET+LFIGP +RR  +
Sbjct: 181 ESNQRSESSNHEEIMDVETELFIGPPERRSNN 212

[Close]

BLAST of Cp4.1LG05g03740 vs. NCBI nr
Match: gi|659073672|ref|XP_008437190.1| (PREDICTED: agamous-like MADS-box protein AGL19 [Cucumis melo])

HSP 1 Score: 309.7 bits (792), Expect = 4.0e-81
Identity = 168/212 (79.25%), Postives = 185/212 (87.26%), Query Frame = 1


Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60

Query: 61  SMNKTIDRYQNRTKEIMCTNNQGLEDVQLEKEFDSFTMTKKLQHLEVCKRKLMGDSLDLC 120
           SMNKTIDRYQNRTK++M +N+   EDVQLEKE+DSF+MTKKL+HLEVCKRKL+GD LDLC
Sbjct: 61  SMNKTIDRYQNRTKDLMSSNSTATEDVQLEKEYDSFSMTKKLEHLEVCKRKLLGDGLDLC 120

Query: 121 SMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKVGSE-WKHQ 180
           S++ELQQLERQ+ERSL+KIRSRKYQ+LK+EITKLKEEEK LLEENAAL  KV SE  K Q
Sbjct: 121 SIDELQQLERQLERSLSKIRSRKYQMLKDEITKLKEEEKKLLEENAALQIKVRSESSKKQ 180

Query: 181 D-----------EAMDVETQLFIGPSDRRGGS 201
           D           E MDVET+LFIGP +RR  +
Sbjct: 181 DSNQRSESSNHEEIMDVETELFIGPPERRSNN 212

[Close]

BLAST of Cp4.1LG05g03740 vs. NCBI nr
Match: gi|568847054|ref|XP_006477355.1| (PREDICTED: agamous-like MADS-box protein AGL19 isoform X2 [Citrus sinensis])

HSP 1 Score: 235.3 bits (599), Expect = 9.5e-59
Identity = 131/201 (65.17%), Postives = 162/201 (80.60%), Query Frame = 1


Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFS+C
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSC 60

Query: 61  SMNKTIDRYQNRTKEIMCTNNQGLEDVQLEKEFDSFTMTKKLQHLEVCKRKLMGDSLDLC 120
           S+NKTI+RYQ +TK+I   N++ +ED     +  +  M  KL+ LEV KRKL+GD L+ C
Sbjct: 61  SINKTIERYQKKTKDI-GINSKIVEDHSQHAKEQTSNMMTKLEFLEVAKRKLLGDGLEPC 120

Query: 121 SMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKVGSE----W 180
           +++ELQQLE Q+ERSL++IR+RK QL +E+I KLKE+EK+L+EEN  L ++ G +     
Sbjct: 121 TIDELQQLENQLERSLSRIRARKNQLFREQIEKLKEKEKILIEENTKLREQCGMQPRQAS 180

Query: 181 KHQDEAMDVETQLFIGPSDRR 198
           + Q+  MDVETQL IGP +RR
Sbjct: 181 EEQEVYMDVETQLSIGPPERR 200

[Close]

BLAST of Cp4.1LG05g03740 vs. NCBI nr
Match: gi|802741207|ref|XP_012087037.1| (PREDICTED: agamous-like MADS-box protein AGL19 [Jatropha curcas])

HSP 1 Score: 233.4 bits (594), Expect = 3.6e-58
Identity = 133/208 (63.94%), Postives = 163/208 (78.37%), Query Frame = 1


Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRG+LYEFS+C
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGRLYEFSSC 60

Query: 61  SMNKTIDRYQNRTKEIMCTNNQGLEDVQLEKEFDSFTMTKKLQHLEVCKRKLMGDSLDLC 120
           SMNKTI+RYQ +  ++  +     E++Q  KE D+ ++ KK++HLEV KRK++GD L+ C
Sbjct: 61  SMNKTIERYQKKVIDLGISIKAVQENMQNIKE-DTLSLGKKIEHLEVSKRKMLGDGLEPC 120

Query: 121 SMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKVG------S 180
            ++ELQQLE Q+ERSLT+IR+RK QL +E I KL+EEEK+LLEEN +L +K G      S
Sbjct: 121 PIDELQQLENQLERSLTRIRARKGQLFRERIEKLREEEKILLEENTSLREKCGMQPMELS 180

Query: 181 EWKHQ-----DEAMDVETQLFIGPSDRR 198
             K Q      E+M+VET LFIGP + R
Sbjct: 181 TKKQQIQVADRESMEVETALFIGPPETR 207

[Close]

BLAST of Cp4.1LG05g03740 vs. NCBI nr
Match: gi|729309213|ref|XP_010529519.1| (PREDICTED: agamous-like MADS-box protein AGL14 [Tarenaya hassleriana])

HSP 1 Score: 232.6 bits (592), Expect = 6.2e-58
Identity = 132/210 (62.86%), Postives = 161/210 (76.67%), Query Frame = 1


Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGKT+MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFS+ 
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60

Query: 61  SMNKTIDRYQNRTKEIMCTNNQGLEDVQLEKEFDSFTMTKKLQHLEVCKRKLMGDSLDLC 120
           S+ KTIDRYQ RTK++  TN++G  + Q  K+ +++ + +K++ LE+ KRK++G+ L+ C
Sbjct: 61  SITKTIDRYQKRTKDLAITNSKGNVNSQPAKD-ETYGLARKIEQLEISKRKMLGEGLEAC 120

Query: 121 SMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEEN-------------AA 180
           S+EELQQLE Q+ER LTKIR++KYQL +EEI KLKEEE+ LLEEN             A 
Sbjct: 121 SIEELQQLENQLERGLTKIRAKKYQLFREEIEKLKEEERNLLEENKKLKEECETGARGAL 180

Query: 181 LLKKVGSEWKHQDEAMDVETQLFIGPSDRR 198
           L  K   E K  D  M+VET LFIGP + R
Sbjct: 181 LQAKQVEEVKIDD--MEVETDLFIGPPETR 207

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g03740 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AGL19_ARATH	7.5e-56	57.60	Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=1 SV=1	[more]
AGL14_ARATH	4.6e-53	56.54	Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=1 SV=2	[more]
SOC1_ARATH	9.5e-51	55.29	MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1	[more]
MAD50_ORYSJ	1.2e-48	55.16	MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 ...	[more]
AGL42_ARATH	3.2e-46	53.59	MADS-box protein AGL42 OS=Arabidopsis thaliana GN=AGL42 PE=2 SV=1	[more]

BLAST of Cp4.1LG05g03740 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067K164_JATCU	2.5e-58	63.94	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20695 PE=4 SV=1	[more]
C3PTE7_POPTO	4.8e-57	61.06	MADS box transcription factor OS=Populus tomentosa GN=MADS3 PE=2 SV=1	[more]
B9GW46_POPTR	2.0e-55	61.54	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s11960g PE=4 SV=1	[more]
A0A0U2VU03_CAMSI	5.8e-55	60.29	SOC1 OS=Camellia sinensis GN=SOC1 PE=2 SV=1	[more]
A0A087HAW1_ARAAL	1.3e-54	58.69	Mads box agl protein OS=Arabis alpina GN=AALP_AA3G221600 PE=4 SV=1	[more]

BLAST of Cp4.1LG05g03740 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G22950.1	4.3e-57	57.60	AGAMOUS-like 19	[more]
AT4G11880.1	2.6e-54	56.54	AGAMOUS-like 14	[more]
AT2G45660.1	5.4e-52	55.29	AGAMOUS-like 20	[more]
AT5G62165.1	1.8e-47	53.59	AGAMOUS-like 42	[more]
AT5G51860.1	2.0e-38	47.80	K-box region and MADS-box transcription factor family protein	[more]

BLAST of Cp4.1LG05g03740 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778699809\|ref\|XP_011654776.1\|	2.3e-81	77.83	PREDICTED: agamous-like MADS-box protein AGL19 [Cucumis sativus]	[more]
gi\|659073672\|ref\|XP_008437190.1\|	4.0e-81	79.25	PREDICTED: agamous-like MADS-box protein AGL19 [Cucumis melo]	[more]
gi\|568847054\|ref\|XP_006477355.1\|	9.5e-59	65.17	PREDICTED: agamous-like MADS-box protein AGL19 isoform X2 [Citrus sinensis]	[more]
gi\|802741207\|ref\|XP_012087037.1\|	3.6e-58	63.94	PREDICTED: agamous-like MADS-box protein AGL19 [Jatropha curcas]	[more]
gi\|729309213\|ref\|XP_010529519.1\|	6.2e-58	62.86	PREDICTED: agamous-like MADS-box protein AGL14 [Tarenaya hassleriana]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0046983	protein dimerization activity
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002487	TF_Kbox
IPR002100	TF_MADSbox

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0043481	anthocyanin accumulation in tissues in response to UV light
biological_process	GO:0048440	carpel development
biological_process	GO:0048510	regulation of timing of transition from vegetative to reproductive phase
biological_process	GO:0010048	vernalization response
biological_process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g03740.1	Cp4.1LG05g03740.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 6.9E-31coord: 38..59 score: 6.9E-31coord: 23..38 score: 6.9
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 score: 4.9
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 score: 1.1
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57 scor
IPR002100	Transcription factor, MADS-box	PROFILE	PS50066	MADS_BOX_2	coord: 1..61 score: 31
IPR002100	Transcription factor, MADS-box	unknown	SSF55455	SRF-like	coord: 3..87 score: 2.22
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 97..172 score: 2.7
IPR002487	Transcription factor, K-box	PROFILE	PS51297	K_BOX	coord: 88..182 score: 13
None	No IPR available	unknown	Coil	Coil	coord: 122..142 score: -coord: 144..171 scor
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 2..168 score: 2.9
None	No IPR available	PANTHER	PTHR11945:SF191	AGAMOUS-LIKE MADS-BOX PROTEIN AGL14-RELATED	coord: 2..168 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG05g03740	Cucsa.302640	Cucumber (Gy14) v1	cgycpeB0792
Cp4.1LG05g03740	CmaCh15G011860	Cucurbita maxima (Rimu)	cmacpeB329
Cp4.1LG05g03740	CmaCh02G014940	Cucurbita maxima (Rimu)	cmacpeB647
Cp4.1LG05g03740	CmoCh15G012500	Cucurbita moschata (Rifu)	cmocpeB292
Cp4.1LG05g03740	CmoCh02G015340	Cucurbita moschata (Rifu)	cmocpeB596
Cp4.1LG05g03740	Cla011501	Watermelon (97103) v1	cpewmB717
Cp4.1LG05g03740	Csa5G156170	Cucumber (Chinese Long) v2	cpecuB736
Cp4.1LG05g03740	MELO3C006860	Melon (DHL92) v3.5.1	cpemeB697
Cp4.1LG05g03740	MELO3C005617	Melon (DHL92) v3.5.1	cpemeB647
Cp4.1LG05g03740	ClCG01G003280	Watermelon (Charleston Gray)	cpewcgB639
Cp4.1LG05g03740	CSPI05G05990	Wild cucumber (PI 183967)	cpecpiB738
Cp4.1LG05g03740	Lsi09G003210	Bottle gourd (USVL1VR-Ls)	cpelsiB582
Cp4.1LG05g03740	MELO3C006860.2	Melon (DHL92) v3.6.1	cpemedB831
Cp4.1LG05g03740	MELO3C005617.2	Melon (DHL92) v3.6.1	cpemedB774
Cp4.1LG05g03740	CsaV3_3G016650	Cucumber (Chinese Long) v3	cpecucB0896
Cp4.1LG05g03740	CsaV3_5G003360	Cucumber (Chinese Long) v3	cpecucB0915
Cp4.1LG05g03740	Bhi01G001014	Wax gourd	cpewgoB0929
Cp4.1LG05g03740	Bhi12G000302	Wax gourd	cpewgoB0920
Cp4.1LG05g03740	CsGy5G003270	Cucumber (Gy14) v2	cgybcpeB691
Cp4.1LG05g03740	CsGy3G016560	Cucumber (Gy14) v2	cgybcpeB427
Cp4.1LG05g03740	Carg02494	Silver-seed gourd	carcpeB1282
Cp4.1LG05g03740	Carg16667	Silver-seed gourd	carcpeB1298

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG05g03740	Cp4.1LG13g01770	Cucurbita pepo (Zucchini)	cpecpeB226

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG05g03740	Cucurbita pepo (Zucchini)	cpecpeB058
Cp4.1LG05g03740	Cucumber (Gy14) v1	cgycpeB0686
Cp4.1LG05g03740	Cucurbita maxima (Rimu)	cmacpeB361
Cp4.1LG05g03740	Cucurbita moschata (Rifu)	cmocpeB326
Cp4.1LG05g03740	Wild cucumber (PI 183967)	cpecpiB721
Cp4.1LG05g03740	Cucumber (Chinese Long) v2	cpecuB719
Cp4.1LG05g03740	Bottle gourd (USVL1VR-Ls)	cpelsiB624
Cp4.1LG05g03740	Watermelon (Charleston Gray)	cpewcgB676
Cp4.1LG05g03740	Watermelon (97103) v1	cpewmB703