Cp4.1LG05g03460 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG05g03460
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Remorin
Location	Cp4.1LG05 : 1770702 .. 1772277 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGGCGCCGACGAGTCTGAACCAGATTCGCAGCCGCCAGTGCCGCTTCAAAACAACTCCCTCATTCCCCACGGTATTTTTCTTCCCTTCCTTTTTCTTTTTCTGTTTGGTTTCTGGGAAAACCAAAATCACTCTTTCCTGGAATGTTTTTGTTTATAGCACCTTTCTTCTATCAGTCTCTTTGGGTATCTGTGTAAGACGAATAAGACTCTCCACAATGATATGATATTGTCCACTTTGAGCATAAGCTCTTGTGTCTTTGTTTTGAGCTTTCCCAAAATGTCTAATAACAATGGAGTTAGTATTACTCACTTATAAACCCATAATCATTCCCTACATCATCCAACACTCTTGCCTCTCTTTTGTGTGTGTTTGGCTTCCGGGAAAATCTTACTTTCCCAGAAAATGCATCCTTGAATTATTGAACCAAAAAATAGTAAAAAGTGGTTTTTGAATGTACTGGGAAAAGAGTGCCATGACTGATCAGCTTTTTTTGCTACACAGCTTTATTGCCTTGTCTAGAAATTTTTGTATACCCTAATTTCTGAATATTTATGTAAATTATTACAAGACATAAAATATATATATTGTCTTTTGTCTGGTTGTTCTCAATAATCATTTATTTGGGAAGAAAACAGTGTCCAATTTATTTGTTTTCCAATCATTTGTTGGTCCTCTTTGGAAATAAATCTGCAAAATGACAGAAAACTAATAATGGTGACAATCACATTCTTCATTAAAAGAAAAAAAAAAACATGTTCTTGAACAAATTATGTGCTTTATTCGGTTCATGTCATTTTTTGTTGTATTAGTGGCTGATTTCTTGTCTAACAAAGACAAAATAAATGACAGCGGTTTCAGCTCCTCATTCCGACAAACTTGTTCCTCCAAAGGACAGAGGTAAAACTCTCCATTTTCTTTCTAGTTGCCTCTAATTCAACAGTATTTGCAAGATTCTTGCGTTCGAGATATTCGAAAGTGTTCGTTAAAAGTAGAAAACGAAACAAAGAAATTGTTATAGAACGGGGTTTTGTGATCTTAGATGTTGCGTTGGCTCGTGTCGAATTGGAGAAGAAGTTGGCATTGATCAAAGCATGGGAGGAGAGTGAGAAGATCAAGGCAGAGAACAGGTAAACTATAGAGAAGTTTGTTCGTTGTTGAATTTTGGATTCTGTACTTGAAATCTTTGGAACAGGGCATACAAACGGCTCTCTGCTATTGATTCTTGGGAGAATACCAAAAAAGCTTCAATACAAGCACAGCTGATGAAGTTAGAGGTAAATTTTCATTTCTTTACTTCTTTCTCATTGATTAAGACTCGGGTTTTCGATACGAGTTTTGAAGCGTTTGGTCTTTTGTGAAACGAAAGGAGAAAATGGAGAAGAAGAAAGCTGAGTATGGCGAGCTAATGAAGAACAAAATCGTTGGAATTCACAAGCAAGGTGAAGAGAAGAAAGCAACCATTGTAGCCGAGCGAAGAGAACAGTGTCTGAAGGTCGAGGAGACTGCAGCAAAATATCGAGCTTCCGGGTTCACCCCGAAGGCTCTACTACTCAAATGCTTCAGTGGTTGA

mRNA sequence

ATGGGCGGCGCCGACGAGTCTGAACCAGATTCGCAGCCGCCAGTGCCGCTTCAAAACAACTCCCTCATTCCCCACGCGGTTTCAGCTCCTCATTCCGACAAACTTGTTCCTCCAAAGGACAGAGATGTTGCGTTGGCTCGTGTCGAATTGGAGAAGAAGTTGGCATTGATCAAAGCATGGGAGGAGAGTGAGAAGATCAAGGCAGAGAACAGGGCATACAAACGGCTCTCTGCTATTGATTCTTGGGAGAATACCAAAAAAGCTTCAATACAAGCACAGCTGATGAAGTTAGAGGAGAAAATGGAGAAGAAGAAAGCTGAGTATGGCGAGCTAATGAAGAACAAAATCGTTGGAATTCACAAGCAAGGTGAAGAGAAGAAAGCAACCATTGTAGCCGAGCGAAGAGAACAGTGTCTGAAGGTCGAGGAGACTGCAGCAAAATATCGAGCTTCCGGGTTCACCCCGAAGGCTCTACTACTCAAATGCTTCAGTGGTTGA

Coding sequence (CDS)

ATGGGCGGCGCCGACGAGTCTGAACCAGATTCGCAGCCGCCAGTGCCGCTTCAAAACAACTCCCTCATTCCCCACGCGGTTTCAGCTCCTCATTCCGACAAACTTGTTCCTCCAAAGGACAGAGATGTTGCGTTGGCTCGTGTCGAATTGGAGAAGAAGTTGGCATTGATCAAAGCATGGGAGGAGAGTGAGAAGATCAAGGCAGAGAACAGGGCATACAAACGGCTCTCTGCTATTGATTCTTGGGAGAATACCAAAAAAGCTTCAATACAAGCACAGCTGATGAAGTTAGAGGAGAAAATGGAGAAGAAGAAAGCTGAGTATGGCGAGCTAATGAAGAACAAAATCGTTGGAATTCACAAGCAAGGTGAAGAGAAGAAAGCAACCATTGTAGCCGAGCGAAGAGAACAGTGTCTGAAGGTCGAGGAGACTGCAGCAAAATATCGAGCTTCCGGGTTCACCCCGAAGGCTCTACTACTCAAATGCTTCAGTGGTTGA

Protein sequence

MGGADESEPDSQPPVPLQNNSLIPHAVSAPHSDKLVPPKDRDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIVAERREQCLKVEETAAKYRASGFTPKALLLKCFSG

Homology

[Close]

BLAST of Cp4.1LG05g03460 vs. Swiss-Prot
Match: REMO_ARATH (Remorin OS=Arabidopsis thaliana GN=DBP PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.8e-33
Identity = 81/150 (54.00%), Postives = 107/150 (71.33%), Query Frame = 1


Query: 14  PVPLQNNSLIPHAVSAPHSDKLVPPK------DRDVALARVELEKKLALIKAWEESEKIK 73
           P P+++ +L   AV     ++  P K      DRDV LA +E EKK + IKAWEESEK K
Sbjct: 39  PPPVESKAL---AVVEKPIEEHTPKKASSGSADRDVILADLEKEKKTSFIKAWEESEKSK 98

Query: 74  AENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKK 133
           AENRA K++S + +WEN+KKA+++AQL K+EEK+EKKKA+YGE MKNK+  IHK  EEK+
Sbjct: 99  AENRAQKKISDVHAWENSKKAAVEAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKR 158

Query: 134 ATIVAERREQCLKVEETAAKYRASGFTPKA 158
           A + A++ E+ LK EE  AKYRA+G  PKA
Sbjct: 159 AMVEAKKGEELLKAEEMGAKYRATGVVPKA 185

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BLAST of Cp4.1LG05g03460 vs. Swiss-Prot
Match: REMO_SOLTU (Remorin OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.4e-33
Identity = 82/153 (53.59%), Postives = 108/153 (70.59%), Query Frame = 1


Query: 9   PDSQPPVPLQNNSLIPHAVSAPH--SDKLVPPKDRDVALARVELEKKLALIKAWEESEKI 68
           P  +   P  + +L+     AP    +K     DRD  LARV  EK+++LIKAWEESEK 
Sbjct: 43  PAEEKEKPDDSKALVVVETKAPEPADEKKEGSIDRDAVLARVATEKRVSLIKAWEESEKS 102

Query: 69  KAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEK 128
           KAEN+A K++SAI +WEN+KKA+++A+L K+EE++EKKKAEY E MKNKI  +HK+ EEK
Sbjct: 103 KAENKAQKKVSAIGAWENSKKANLEAELKKMEEQLEKKKAEYTEKMKNKIALLHKEAEEK 162

Query: 129 KATIVAERREQCLKVEETAAKYRASGFTPKALL 160
           +A I A+R E  LK EE AAKYRA+G  PK +L
Sbjct: 163 RAMIEAKRGEDLLKAEELAAKYRATGTAPKKIL 195

[Close]

BLAST of Cp4.1LG05g03460 vs. Swiss-Prot
Match: Y3126_ARATH (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.5e-32
Identity = 79/158 (50.00%), Postives = 109/158 (68.99%), Query Frame = 1


Query: 6   ESEPDSQPPVPLQNNSLIPHAVSAPHSDKLVPPK------DRDVALARVELEKKLALIKA 65
           E +  + PP  + ++S     V  P  +   P K      DRDV LA +  EK+L+ ++A
Sbjct: 51  EEKIQNPPPEQIFDDSKALTVVEKPVEEP-APAKPASASLDRDVKLADLSKEKRLSFVRA 110

Query: 66  WEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKAEYGELMKNKIVGI 125
           WEESEK KAEN+A K+++ + +WEN+KKA+++AQL K+EE++EKKKAEY E MKNK+  I
Sbjct: 111 WEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAI 170

Query: 126 HKQGEEKKATIVAERREQCLKVEETAAKYRASGFTPKA 158
           HK+ EE++A I A+R E  LK EETAAKYRA+G  PKA
Sbjct: 171 HKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVPKA 207

[Close]

BLAST of Cp4.1LG05g03460 vs. TrEMBL
Match: T1R3E6_DATGL (Remorin 2 OS=Datisca glomerata GN=REM2 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.4e-40
Identity = 100/164 (60.98%), Postives = 121/164 (73.78%), Query Frame = 1


Query: 5   DESEPDSQPPVPLQNNSL---IPHAVSAPHSDKLVPPK-DRDVALARVELEKKLALIKAW 64
           D +E  S   +PL ++     +P  +S   S+K      DRD  LARVE EK+LALIKAW
Sbjct: 24  DVAEEKSVTVIPLSDHKSSLSVPEKISDAASEKSAGGSIDRDAVLARVETEKRLALIKAW 83

Query: 65  EESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKAEYGELMKNKIVGIH 124
           EESEK +AEN+A+K+LSAIDSWEN KKAS++AQL K+EEK+EKKKAEYGE MKNK+V +H
Sbjct: 84  EESEKTRAENKAFKKLSAIDSWENRKKASVEAQLRKIEEKLEKKKAEYGEQMKNKMVEVH 143

Query: 125 KQGEEKKATIVAERREQCLKVEETAAKYRASGFTPKALLLKCFS 165
           K  EEK+A + A R EQ LKVEETAAKYRA+GF PK  L  CFS
Sbjct: 144 KAAEEKRAVVEASRGEQFLKVEETAAKYRAAGFAPKK-LFGCFS 186

[Close]

BLAST of Cp4.1LG05g03460 vs. TrEMBL
Match: A0A0A0KQX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G154830 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 6.6e-38
Identity = 90/124 (72.58%), Postives = 104/124 (83.87%), Query Frame = 1


Query: 4   ADESEPDSQPPVPLQNNSLIPHAVSAPHSDKLVPPKDRDVALARVELEKKLALIKAWEES 63
           AD+SEPD  PP        +PH +S   S+K+   KDRD+ALARVE EKK+ALIKAWEES
Sbjct: 3   ADDSEPDQPPPQNDVAPISLPHKIS-DSSEKIDAAKDRDIALARVEWEKKMALIKAWEES 62

Query: 64  EKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKAEYGELMKNKIVGIHKQG 123
           EKIKAEN+AYKRLSA++SWENT+KASI+AQLMK+EEKMEKKKAEY E MKNKIVGIHK+G
Sbjct: 63  EKIKAENKAYKRLSAVESWENTRKASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEG 122

Query: 124 EEKK 128
           EEKK
Sbjct: 123 EEKK 125

[Close]

BLAST of Cp4.1LG05g03460 vs. TrEMBL
Match: A0A059C173_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00569 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.6e-36
Identity = 86/155 (55.48%), Postives = 113/155 (72.90%), Query Frame = 1


Query: 8   EPDSQPPVPLQNNSLIPHAVSAPHSDKLVPPKDRDVALARVELEKKLALIKAWEESEKIK 67
           E +  P +  +N+  +P  V+ P         DRD  LARVE EK+LALIKAWEESEK K
Sbjct: 48  ENNVSPAIAEKNSPAVPQKVADPVEKYSGGSIDRDAVLARVETEKRLALIKAWEESEKTK 107

Query: 68  AENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKK 127
            +N+ YK+ S I +WENTK+A+I+A+L K+EEK+EKKKAEY E+MKNKIV IHK  EEK+
Sbjct: 108 VDNKTYKKFSGIGAWENTKRAAIEAELKKIEEKLEKKKAEYAEMMKNKIVEIHKAAEEKR 167

Query: 128 ATIVAERREQCLKVEETAAKYRASGFTPKALLLKC 163
           A + A++ E  LK+EETAAK+RA+G+TP+ LL  C
Sbjct: 168 ALVEAKKGESFLKIEETAAKFRATGYTPRKLLGCC 202

[Close]

BLAST of Cp4.1LG05g03460 vs. TrEMBL
Match: W9R3C7_9ROSA (Pollen-specific protein SF3 OS=Morus notabilis GN=L484_024314 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.8e-35
Identity = 89/156 (57.05%), Postives = 115/156 (73.72%), Query Frame = 1


Query: 8   EPDSQPPVPLQNNSLIPHAVSAPHSDKLVPPKDRDVALARVELEKKLALIKAWEESEKIK 67
           E  S  PVP +       AV  P  +K     DRD  LA+VE EK+LALIKAWEESEK K
Sbjct: 65  EKKSLSPVPQEK------AVQNPVVEKN-QEVDRDAVLAQVETEKRLALIKAWEESEKTK 124

Query: 68  AENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKK 127
           +EN+AYK+ SA+ +WEN+K+A+++A+L  +EEK+EKK+AEY E MKNK+  +HK  EEK+
Sbjct: 125 SENKAYKKFSAVGAWENSKRAAVEAELRAIEEKLEKKRAEYTEKMKNKVAEVHKLAEEKR 184

Query: 128 ATIVAERREQCLKVEETAAKYRASGFTPKALLLKCF 164
           A + A +RE+CLKVEETAAK+RASGF PK  LL+CF
Sbjct: 185 AFVEANKREECLKVEETAAKFRASGFKPKK-LLRCF 212

[Close]

BLAST of Cp4.1LG05g03460 vs. TrEMBL
Match: A0A0N7KJF0_ORYSJ (Os04g0533300 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os04g0533300 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.3e-35
Identity = 90/157 (57.32%), Postives = 115/157 (73.25%), Query Frame = 1


Query: 9   PDSQPPVPLQNNSLIPHAVSAPHSDKLVP--PKDRDVALARVELEKKLALIKAWEESEKI 68
           P   PP+PL   +++      P ++K       DRDVALARVE EK+ +LIKAWEE+EK 
Sbjct: 55  PRRHPPLPL---AIVEKVADEPPAEKPAQGGSNDRDVALARVETEKRNSLIKAWEENEKT 114

Query: 69  KAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEK 128
           KAEN+A K+LSAI SWENTKKA+I+AQL K+EE++EKKKAEY E MKNK+  +HK+ EEK
Sbjct: 115 KAENKASKKLSAILSWENTKKANIEAQLKKIEEQLEKKKAEYAEKMKNKVAIVHKEAEEK 174

Query: 129 KATIVAERREQCLKVEETAAKYRASGFTPKALLLKCF 164
           +A + A+R E+ LK EE AAKYRA+G  PK  L+ CF
Sbjct: 175 RAMVEAKRGEEVLKAEEMAAKYRATGHAPKK-LIGCF 207

[Close]

BLAST of Cp4.1LG05g03460 vs. TAIR10
Match: AT5G23750.1 (AT5G23750.1 Remorin family protein)

HSP 1 Score: 146.7 bits (369), Expect = 1.2e-35
Identity = 85/155 (54.84%), Postives = 111/155 (71.61%), Query Frame = 1


Query: 4   ADESEPDSQPPVPLQNNSLIPHAVSAPHSDKLVPPKDRDVALARVELEKKLALIKAWEES 63
           A+E + DS+  VP+     +P  V     +  V   +RD  LARVE EK+++LIKAWEE+
Sbjct: 52  AEEKQEDSKAIVPV-----VPKEVEEEKKEGSV---NRDAVLARVETEKRMSLIKAWEEA 111

Query: 64  EKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKAEYGELMKNKIVGIHKQG 123
           EK K EN+A K+LS+I SWEN KKA+++A+L K+EE++EKKKAEY E MKNKI  IHK+ 
Sbjct: 112 EKCKVENKAEKKLSSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEA 171

Query: 124 EEKKATIVAERREQCLKVEETAAKYRASGFTPKAL 159
           EEK+A I A+R E+ LK EE AAKYRA+G  PK L
Sbjct: 172 EEKRAMIEAKRGEEILKAEELAAKYRATGTAPKKL 198

[Close]

BLAST of Cp4.1LG05g03460 vs. TAIR10
Match: AT2G45820.1 (AT2G45820.1 Remorin family protein)

HSP 1 Score: 143.7 bits (361), Expect = 1.0e-34
Identity = 81/150 (54.00%), Postives = 107/150 (71.33%), Query Frame = 1


Query: 14  PVPLQNNSLIPHAVSAPHSDKLVPPK------DRDVALARVELEKKLALIKAWEESEKIK 73
           P P+++ +L   AV     ++  P K      DRDV LA +E EKK + IKAWEESEK K
Sbjct: 39  PPPVESKAL---AVVEKPIEEHTPKKASSGSADRDVILADLEKEKKTSFIKAWEESEKSK 98

Query: 74  AENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKK 133
           AENRA K++S + +WEN+KKA+++AQL K+EEK+EKKKA+YGE MKNK+  IHK  EEK+
Sbjct: 99  AENRAQKKISDVHAWENSKKAAVEAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKR 158

Query: 134 ATIVAERREQCLKVEETAAKYRASGFTPKA 158
           A + A++ E+ LK EE  AKYRA+G  PKA
Sbjct: 159 AMVEAKKGEELLKAEEMGAKYRATGVVPKA 185

[Close]

BLAST of Cp4.1LG05g03460 vs. TAIR10
Match: AT3G61260.1 (AT3G61260.1 Remorin family protein)

HSP 1 Score: 139.4 bits (350), Expect = 2.0e-33
Identity = 79/158 (50.00%), Postives = 109/158 (68.99%), Query Frame = 1


Query: 6   ESEPDSQPPVPLQNNSLIPHAVSAPHSDKLVPPK------DRDVALARVELEKKLALIKA 65
           E +  + PP  + ++S     V  P  +   P K      DRDV LA +  EK+L+ ++A
Sbjct: 51  EEKIQNPPPEQIFDDSKALTVVEKPVEEP-APAKPASASLDRDVKLADLSKEKRLSFVRA 110

Query: 66  WEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKAEYGELMKNKIVGI 125
           WEESEK KAEN+A K+++ + +WEN+KKA+++AQL K+EE++EKKKAEY E MKNK+  I
Sbjct: 111 WEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAI 170

Query: 126 HKQGEEKKATIVAERREQCLKVEETAAKYRASGFTPKA 158
           HK+ EE++A I A+R E  LK EETAAKYRA+G  PKA
Sbjct: 171 HKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVPKA 207

[Close]

BLAST of Cp4.1LG05g03460 vs. TAIR10
Match: AT3G48940.1 (AT3G48940.1 Remorin family protein)

HSP 1 Score: 136.0 bits (341), Expect = 2.2e-32
Identity = 72/133 (54.14%), Postives = 95/133 (71.43%), Query Frame = 1


Query: 26  AVSAPHSDKLVPPKDRDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENT 85
           A   P  DK V    RD  L R+E +K+++LIKAWEE+EK K EN+A K++S++ +WEN+
Sbjct: 39  AAKEPTEDKKVGSVHRDAVLVRLEQDKRISLIKAWEEAEKSKVENKAQKKISSVGAWENS 98

Query: 86  KKASIQAQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIVAERREQCLKVEETA 145
           KKAS++A+L K+EE++ KKKA Y E MKNKI  IHK+ EEK+A   A+R E  LK EE A
Sbjct: 99  KKASVEAELKKIEEQLNKKKAHYTEQMKNKIAQIHKEAEEKRAMTEAKRGEDVLKAEEMA 158

Query: 146 AKYRASGFTPKAL 159
           AKYRA+G  P  L
Sbjct: 159 AKYRATGTAPTKL 171

[Close]

BLAST of Cp4.1LG05g03460 vs. TAIR10
Match: AT1G63295.1 (AT1G63295.1 Remorin family protein)

HSP 1 Score: 86.3 bits (212), Expect = 2.0e-17
Identity = 48/121 (39.67%), Postives = 74/121 (61.16%), Query Frame = 1


Query: 45  LARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKK 104
           L  +E EK+LALI AWEE+EK KA+ +AYK L +I+SWEN  K +++  L K+EE ++ +
Sbjct: 31  LVEIEKEKRLALIDAWEENEKAKAQTKAYKELCSIESWENNMKTALELDLKKMEENLQVE 90

Query: 105 KAEYGELMKNKIVGIHKQGEEKKATIVAERREQCLKVEETAAKYRA--SGFTPKALLLKC 164
           K E+ +  K KI  I K  E K+  I  ++ ++ +KVE+ + K  A  + + P      C
Sbjct: 91  KTEFSKKFKKKIPEIEKIAEAKREKIEKQKEQESIKVEKISEKLIATPNAYPPNTKTCGC 150

[Close]

BLAST of Cp4.1LG05g03460 vs. NCBI nr
Match: gi|659073759|ref|XP_008437237.1| (PREDICTED: remorin isoform X2 [Cucumis melo])

HSP 1 Score: 220.3 bits (560), Expect = 2.5e-54
Identity = 120/162 (74.07%), Postives = 137/162 (84.57%), Query Frame = 1


Query: 4   ADESEPDSQPPVPLQNNSLIPHAVSAPHSDKLVPPKDRDVALARVELEKKLALIKAWEES 63
           AD+SEPD  PP     +  +PH +S   ++K+   KDRD+ALARVE EKK+ALIKAWEES
Sbjct: 62  ADDSEPDQPPPQNDVASISLPHKIS-DSAEKVDAAKDRDIALARVEWEKKMALIKAWEES 121

Query: 64  EKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKAEYGELMKNKIVGIHKQG 123
           EKIKAEN+AYKRLSA++SWENT+KASI+AQLMK+EEKMEKKKAEY E MKNKIVGIHK+G
Sbjct: 122 EKIKAENKAYKRLSAVESWENTRKASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEG 181

Query: 124 EEKKATIVAERREQCLKVEETAAKYRASGFTPKALLLKCFSG 166
           EEKKATI AER+EQCLKVEETA KYR SGF PK  LLKCFSG
Sbjct: 182 EEKKATIEAERKEQCLKVEETAEKYRTSGFIPKT-LLKCFSG 221

[Close]

BLAST of Cp4.1LG05g03460 vs. NCBI nr
Match: gi|659073757|ref|XP_008437236.1| (PREDICTED: remorin isoform X1 [Cucumis melo])

HSP 1 Score: 219.2 bits (557), Expect = 5.5e-54
Identity = 123/169 (72.78%), Postives = 139/169 (82.25%), Query Frame = 1


Query: 4   ADESEPDSQPPVPLQNNSLIPHAVSAPHSDKLVPP-------KDRDVALARVELEKKLAL 63
           AD+SEPD  PP   QN+     ++S PH+DK+          KDRD+ALARVE EKK+AL
Sbjct: 62  ADDSEPDQPPP---QNDVA---SISLPHTDKISDSAEKVDAAKDRDIALARVEWEKKMAL 121

Query: 64  IKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKAEYGELMKNKI 123
           IKAWEESEKIKAEN+AYKRLSA++SWENT+KASI+AQLMK+EEKMEKKKAEY E MKNKI
Sbjct: 122 IKAWEESEKIKAENKAYKRLSAVESWENTRKASIEAQLMKIEEKMEKKKAEYAEQMKNKI 181

Query: 124 VGIHKQGEEKKATIVAERREQCLKVEETAAKYRASGFTPKALLLKCFSG 166
           VGIHK+GEEKKATI AER+EQCLKVEETA KYR SGF PK  LLKCFSG
Sbjct: 182 VGIHKEGEEKKATIEAERKEQCLKVEETAEKYRTSGFIPKT-LLKCFSG 223

[Close]

BLAST of Cp4.1LG05g03460 vs. NCBI nr
Match: gi|449452352|ref|XP_004143923.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein At3g61260 [Cucumis sativus])

HSP 1 Score: 216.5 bits (550), Expect = 3.6e-53
Identity = 119/162 (73.46%), Postives = 134/162 (82.72%), Query Frame = 1


Query: 4   ADESEPDSQPPVPLQNNSLIPHAVSAPHSDKLVPPKDRDVALARVELEKKLALIKAWEES 63
           AD+SEPD  PP        +PH +S   S+K+   KDRD+ALARVE EKK+ALIKAWEES
Sbjct: 3   ADDSEPDQPPPQNDVAPISLPHKIS-DSSEKIDAAKDRDIALARVEWEKKMALIKAWEES 62

Query: 64  EKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKAEYGELMKNKIVGIHKQG 123
           EKIKAEN+AYKRLSA++SWENT+KASI+AQLMK+EEKMEKKKAEY E MKNKIVGIHK+G
Sbjct: 63  EKIKAENKAYKRLSAVESWENTRKASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEG 122

Query: 124 EEKKATIVAERREQCLKVEETAAKYRASGFTPKALLLKCFSG 166
           EEK ATI AER+E CLKVEETA KYR SGF PK  LLKCFSG
Sbjct: 123 EEKXATIEAERKEHCLKVEETAEKYRTSGFIPKT-LLKCFSG 162

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BLAST of Cp4.1LG05g03460 vs. NCBI nr
Match: gi|659073761|ref|XP_008437238.1| (PREDICTED: uncharacterized protein At3g61260 isoform X3 [Cucumis melo])

HSP 1 Score: 206.5 bits (524), Expect = 3.7e-50
Identity = 109/134 (81.34%), Postives = 122/134 (91.04%), Query Frame = 1


Query: 32  SDKLVPPKDRDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQ 91
           ++K+   KDRD+ALARVE EKK+ALIKAWEESEKIKAEN+AYKRLSA++SWENT+KASI+
Sbjct: 8   AEKVDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSAVESWENTRKASIE 67

Query: 92  AQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIVAERREQCLKVEETAAKYRAS 151
           AQLMK+EEKMEKKKAEY E MKNKIVGIHK+GEEKKATI AER+EQCLKVEETA KYR S
Sbjct: 68  AQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQCLKVEETAEKYRTS 127

Query: 152 GFTPKALLLKCFSG 166
           GF PK  LLKCFSG
Sbjct: 128 GFIPKT-LLKCFSG 140

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BLAST of Cp4.1LG05g03460 vs. NCBI nr
Match: gi|459680680|gb|AGG82489.1| (remorin 2 [Datisca glomerata])

HSP 1 Score: 172.2 bits (435), Expect = 7.7e-40
Identity = 100/164 (60.98%), Postives = 121/164 (73.78%), Query Frame = 1


Query: 5   DESEPDSQPPVPLQNNSL---IPHAVSAPHSDKLVPPK-DRDVALARVELEKKLALIKAW 64
           D +E  S   +PL ++     +P  +S   S+K      DRD  LARVE EK+LALIKAW
Sbjct: 24  DVAEEKSVTVIPLSDHKSSLSVPEKISDAASEKSAGGSIDRDAVLARVETEKRLALIKAW 83

Query: 65  EESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKAEYGELMKNKIVGIH 124
           EESEK +AEN+A+K+LSAIDSWEN KKAS++AQL K+EEK+EKKKAEYGE MKNK+V +H
Sbjct: 84  EESEKTRAENKAFKKLSAIDSWENRKKASVEAQLRKIEEKLEKKKAEYGEQMKNKMVEVH 143

Query: 125 KQGEEKKATIVAERREQCLKVEETAAKYRASGFTPKALLLKCFS 165
           K  EEK+A + A R EQ LKVEETAAKYRA+GF PK  L  CFS
Sbjct: 144 KAAEEKRAVVEASRGEQFLKVEETAAKYRAAGFAPKK-LFGCFS 186

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g03460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
REMO_ARATH	1.8e-33	54.00	Remorin OS=Arabidopsis thaliana GN=DBP PE=1 SV=1	[more]
REMO_SOLTU	2.4e-33	53.59	Remorin OS=Solanum tuberosum PE=1 SV=1	[more]
Y3126_ARATH	3.5e-32	50.00	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana GN=At3g61260 PE=1 SV=1	[more]

BLAST of Cp4.1LG05g03460 vs. TrEMBL


Match Name	E-value	Identity	Description
T1R3E6_DATGL	5.4e-40	60.98	Remorin 2 OS=Datisca glomerata GN=REM2 PE=2 SV=1	[more]
A0A0A0KQX6_CUCSA	6.6e-38	72.58	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G154830 PE=4 SV=1	[more]
A0A059C173_EUCGR	1.6e-36	55.48	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00569 PE=4 SV=1	[more]
W9R3C7_9ROSA	1.8e-35	57.05	Pollen-specific protein SF3 OS=Morus notabilis GN=L484_024314 PE=4 SV=1	[more]
A0A0N7KJF0_ORYSJ	2.3e-35	57.32	Os04g0533300 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os04g0533300 ...	[more]

BLAST of Cp4.1LG05g03460 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23750.1	1.2e-35	54.84	Remorin family protein	[more]
AT2G45820.1	1.0e-34	54.00	Remorin family protein	[more]
AT3G61260.1	2.0e-33	50.00	Remorin family protein	[more]
AT3G48940.1	2.2e-32	54.14	Remorin family protein	[more]
AT1G63295.1	2.0e-17	39.67	Remorin family protein	[more]

BLAST of Cp4.1LG05g03460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659073759\|ref\|XP_008437237.1\|	2.5e-54	74.07	PREDICTED: remorin isoform X2 [Cucumis melo]	[more]
gi\|659073757\|ref\|XP_008437236.1\|	5.5e-54	72.78	PREDICTED: remorin isoform X1 [Cucumis melo]	[more]
gi\|449452352\|ref\|XP_004143923.1\|	3.6e-53	73.46	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein At3g61260 [Cucumis sativ...	[more]
gi\|659073761\|ref\|XP_008437238.1\|	3.7e-50	81.34	PREDICTED: uncharacterized protein At3g61260 isoform X3 [Cucumis melo]	[more]
gi\|459680680\|gb\|AGG82489.1\|	7.7e-40	60.98	remorin 2 [Datisca glomerata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005516	Remorin_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g03460.1	Cp4.1LG05g03460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 53..156 score: 2.4
None	No IPR available	unknown	Coil	Coil	coord: 87..114 scor
None	No IPR available	PANTHER	PTHR31775	FAMILY NOT NAMED	coord: 40..165 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG05g03460	Cucsa.302930	Cucumber (Gy14) v1	cgycpeB0792
Cp4.1LG05g03460	CmaCh02G014720	Cucurbita maxima (Rimu)	cmacpeB647
Cp4.1LG05g03460	CmoCh02G015070	Cucurbita moschata (Rifu)	cmocpeB596
Cp4.1LG05g03460	Cla011469	Watermelon (97103) v1	cpewmB717
Cp4.1LG05g03460	Csa5G154830	Cucumber (Chinese Long) v2	cpecuB736
Cp4.1LG05g03460	Csa3G182080	Cucumber (Chinese Long) v2	cpecuB719
Cp4.1LG05g03460	MELO3C005653	Melon (DHL92) v3.5.1	cpemeB647
Cp4.1LG05g03460	MELO3C006904	Melon (DHL92) v3.5.1	cpemeB697
Cp4.1LG05g03460	ClCG01G002930	Watermelon (Charleston Gray)	cpewcgB639
Cp4.1LG05g03460	ClCG05G001630	Watermelon (Charleston Gray)	cpewcgB680
Cp4.1LG05g03460	CSPI05G05650	Wild cucumber (PI 183967)	cpecpiB738
Cp4.1LG05g03460	CSPI03G16910	Wild cucumber (PI 183967)	cpecpiB721
Cp4.1LG05g03460	Lsi09G002820	Bottle gourd (USVL1VR-Ls)	cpelsiB582
Cp4.1LG05g03460	MELO3C006904.2	Melon (DHL92) v3.6.1	cpemedB831
Cp4.1LG05g03460	MELO3C005653.2	Melon (DHL92) v3.6.1	cpemedB774
Cp4.1LG05g03460	CsaV3_3G017090	Cucumber (Chinese Long) v3	cpecucB0896
Cp4.1LG05g03460	CsaV3_5G003030	Cucumber (Chinese Long) v3	cpecucB0915
Cp4.1LG05g03460	Bhi01G000964	Wax gourd	cpewgoB0929
Cp4.1LG05g03460	Bhi12G000224	Wax gourd	cpewgoB0910
Cp4.1LG05g03460	CsGy5G002910	Cucumber (Gy14) v2	cgybcpeB691
Cp4.1LG05g03460	CsGy3G017000	Cucumber (Gy14) v2	cgybcpeB427
Cp4.1LG05g03460	Carg02515	Silver-seed gourd	carcpeB1282

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG05g03460	Cp4.1LG00g04720	Cucurbita pepo (Zucchini)	cpecpeB012

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG05g03460	Cucurbita pepo (Zucchini)	cpecpeB226
Cp4.1LG05g03460	Cucurbita maxima (Rimu)	cmacpeB329
Cp4.1LG05g03460	Cucurbita moschata (Rifu)	cmocpeB292
Cp4.1LG05g03460	Silver-seed gourd	carcpeB1298