Cp4.1LG00g04720 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG00g04720
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Remorin
Location	Cp4.1LG00 : 18073511 .. 18075086 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGGCGCCGACGAGTCTGAACCAGATTCGCAGCCGCCAGTGCCGCTTCAAAACAACTCCCTCATTCCCCACGGTATTTTTCTTCCCTTCCTTTTTCTTTTTCTGTTTGGTTTCTGGGAAAACCAAAATCACTCTTTCCTGGAATGTTTTTGTTTATAGCACCTTTCTTCTATCAGTCTCTTTGGGTATCTGTGTAAGACGAATAAGACTCTCCACAATGATATGATATTGTCCACTTTGAGCATAAGCTCTTGTGTCTTTGTTTTGAGCTTTCCCAAAATGTCTAATAACAATGGAGTTAGTATTACTCACTTATAAACCCATAATCATTCCCTACATCATCCAACACTCTTGCCTCTCTTTTGTGTGTGTTTGGCTTCCGGGAAAATCTTACTTTCCCAGAAAATGCATCCTTGAATTATTGAACCAAAAAATAGTAAAAAGTGGTTTTTGAATGTACTGGGAAAAGAGTGCCATGACTGATCAGCTTTTTTTGCTACACAGCTTTATTGCCTTGTCTAGAAATTTTTGTATACCCTAATTTCTGAATATTTATGTAAATTATTACAAGACATAAAATATATATATTGTCTTTTGTCTGGTTGTTCTCAATAATCATTTATTTGGGAAGAAAACAGTGTCCAATTTATTTGTTTTCCAATCATTTGTTGGTCCTCTTTGGAAATAAATCTGCAAAATGACAGAAAACTAATAATGGTGACAATCACATTCTTCATTAAAAGAAAAAAAAAAACATGTTCTTGAACAAATTATGTGCTTTATTCGGTTCATGTCATTTTTTGTTGTATTAGTGGCTGATTTCTTGTCTAACAAAGACAAAATAAATGACAGCGGTTTCAGCTCCTCATTCCGACAAACTTGTTCCTCCAAAGGACAGAGGTAAAACTCTCCATTTTCTTTCTAGTTGCCTCTAATTCAACAGTATTTGCAAGATTCTTGCGTTCGAGATATTCGAAAGTGTTCGTTAAAAGTAGAAAACGAAACAAAGAAATTGTTATAGAACGGGGTTTTGTGATCTTAGATGTTGCGTTGGCTCGTGTCGAATTGGAGAAGAAGTTGGCATTGATCAAAGCATGGGAGGAGAGTGAGAAGATCAAGGCAGAGAACAGGTAAACTATAGAGAAGTTTGTTCGTTGTTGAATTTTGGATTCTGTACTTGAAATCTTTGGAACAGGGCATACAAACGGCTCTCTGCTATTGATTCTTGGGAGAATACCAAAAAAGCTTCAATACAAGCACAGCTGATGAAGTTAGAGGTAAATTTTCATTTCTTTACTTCTTTCTCATTGATTAAGACTCGGGTTTTCGATACGAGTTTTGAAGCGTTTGGTCTTTTGTGAAACGAAAGGAGAAAATGGAGAAGAAGAAAGCTGAGTATGGCGAGCTAATGAAGAACAAAATCGTTGGAATTCACAAGCAAGGTGAAGAGAAGAAAGCAACCATTGAAGCCGAGCGAAGAGAACAGTGTCTGAAGGTCGAGGAGACTGCAGCAAAATATCGAGCTTCCGGGTTCACCCCGAAGGCTCTACTACTCAAATGCTTCAGTGGTTGA

mRNA sequence

ATGGGCGGCGCCGACGAGTCTGAACCAGATTCGCAGCCGCCAGTGCCGCTTCAAAACAACTCCCTCATTCCCCACGTGGCTGATTTCTTGTCTAACAAAGACAAAATAAATGACAGCGGTTTCAGCTCCTCATTCCGACAAACTTGTTCCTCCAAAGGACAGAGAAAACGAAACAAAGAAATTGTTATAGAACGGGGTTTTGTGATCTTAGATGTTGCGTTGGCTCGTGTCGAATTGGAGAAGAAGTTGGCATTGATCAAAGCATGGGAGGAGAGTGAGAAGATCAAGGCAGAGAACAGGGCATACAAACGGCTCTCTGCTATTGATTCTTGGGAGAATACCAAAAAAGCTTCAATACAAGCACAGCTGATGAAGTTAGAGGAGAAAATGGAGAAGAAGAAAGCTGAGTATGGCGAGCTAATGAAGAACAAAATCGTTGGAATTCACAAGCAAGGTGAAGAGAAGAAAGCAACCATTGAAGCCGAGCGAAGAGAACAGTGTCTGAAGGTCGAGGAGACTGCAGCAAAATATCGAGCTTCCGGGTTCACCCCGAAGGCTCTACTACTCAAATGCTTCAGTGGTTGA

Coding sequence (CDS)

ATGGGCGGCGCCGACGAGTCTGAACCAGATTCGCAGCCGCCAGTGCCGCTTCAAAACAACTCCCTCATTCCCCACGTGGCTGATTTCTTGTCTAACAAAGACAAAATAAATGACAGCGGTTTCAGCTCCTCATTCCGACAAACTTGTTCCTCCAAAGGACAGAGAAAACGAAACAAAGAAATTGTTATAGAACGGGGTTTTGTGATCTTAGATGTTGCGTTGGCTCGTGTCGAATTGGAGAAGAAGTTGGCATTGATCAAAGCATGGGAGGAGAGTGAGAAGATCAAGGCAGAGAACAGGGCATACAAACGGCTCTCTGCTATTGATTCTTGGGAGAATACCAAAAAAGCTTCAATACAAGCACAGCTGATGAAGTTAGAGGAGAAAATGGAGAAGAAGAAAGCTGAGTATGGCGAGCTAATGAAGAACAAAATCGTTGGAATTCACAAGCAAGGTGAAGAGAAGAAAGCAACCATTGAAGCCGAGCGAAGAGAACAGTGTCTGAAGGTCGAGGAGACTGCAGCAAAATATCGAGCTTCCGGGTTCACCCCGAAGGCTCTACTACTCAAATGCTTCAGTGGTTGA

Protein sequence

MGGADESEPDSQPPVPLQNNSLIPHVADFLSNKDKINDSGFSSSFRQTCSSKGQRKRNKEIVIERGFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKALLLKCFSG

Homology

[Close]

BLAST of Cp4.1LG00g04720 vs. Swiss-Prot
Match: REMO_SOLTU (Remorin OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.8e-33
Identity = 76/125 (60.80%), Postives = 99/125 (79.20%), Query Frame = 1


Query: 64  ERGFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQL 123
           + G +  D  LARV  EK+++LIKAWEESEK KAEN+A K++SAI +WEN+KKA+++A+L
Sbjct: 71  KEGSIDRDAVLARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAEL 130

Query: 124 MKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFT 183
            K+EE++EKKKAEY E MKNKI  +HK+ EEK+A IEA+R E  LK EE AAKYRA+G  
Sbjct: 131 KKMEEQLEKKKAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGTA 190

Query: 184 PKALL 189
           PK +L
Sbjct: 191 PKKIL 195

[Close]

BLAST of Cp4.1LG00g04720 vs. Swiss-Prot
Match: REMO_ARATH (Remorin OS=Arabidopsis thaliana GN=DBP PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.2e-33
Identity = 73/116 (62.93%), Postives = 93/116 (80.17%), Query Frame = 1


Query: 71  DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKM 130
           DV LA +E EKK + IKAWEESEK KAENRA K++S + +WEN+KKA+++AQL K+EEK+
Sbjct: 70  DVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIEEKL 129

Query: 131 EKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKA 187
           EKKKA+YGE MKNK+  IHK  EEK+A +EA++ E+ LK EE  AKYRA+G  PKA
Sbjct: 130 EKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVVPKA 185

[Close]

BLAST of Cp4.1LG00g04720 vs. Swiss-Prot
Match: Y3126_ARATH (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.3e-32
Identity = 70/116 (60.34%), Postives = 94/116 (81.03%), Query Frame = 1


Query: 71  DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKM 130
           DV LA +  EK+L+ ++AWEESEK KAEN+A K+++ + +WEN+KKA+++AQL K+EE++
Sbjct: 92  DVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQL 151

Query: 131 EKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKA 187
           EKKKAEY E MKNK+  IHK+ EE++A IEA+R E  LK EETAAKYRA+G  PKA
Sbjct: 152 EKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVPKA 207

[Close]

BLAST of Cp4.1LG00g04720 vs. TrEMBL
Match: T1R3E6_DATGL (Remorin 2 OS=Datisca glomerata GN=REM2 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 5.4e-39
Identity = 91/128 (71.09%), Postives = 106/128 (82.81%), Query Frame = 1


Query: 66  GFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMK 125
           G +  D  LARVE EK+LALIKAWEESEK +AEN+A+K+LSAIDSWEN KKAS++AQL K
Sbjct: 60  GSIDRDAVLARVETEKRLALIKAWEESEKTRAENKAFKKLSAIDSWENRKKASVEAQLRK 119

Query: 126 LEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPK 185
           +EEK+EKKKAEYGE MKNK+V +HK  EEK+A +EA R EQ LKVEETAAKYRA+GF PK
Sbjct: 120 IEEKLEKKKAEYGEQMKNKMVEVHKAAEEKRAVVEASRGEQFLKVEETAAKYRAAGFAPK 179

Query: 186 ALLLKCFS 194
             L  CFS
Sbjct: 180 K-LFGCFS 186

[Close]

BLAST of Cp4.1LG00g04720 vs. TrEMBL
Match: W9R3C7_9ROSA (Pollen-specific protein SF3 OS=Morus notabilis GN=L484_024314 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-35
Identity = 84/148 (56.76%), Postives = 115/148 (77.70%), Query Frame = 1


Query: 46  RQTCSSKGQRKRNKEIVIERGFVI-LDVALARVELEKKLALIKAWEESEKIKAENRAYKR 105
           +++ S   Q K  +  V+E+   +  D  LA+VE EK+LALIKAWEESEK K+EN+AYK+
Sbjct: 66  KKSLSPVPQEKAVQNPVVEKNQEVDRDAVLAQVETEKRLALIKAWEESEKTKSENKAYKK 125

Query: 106 LSAIDSWENTKKASIQAQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERR 165
            SA+ +WEN+K+A+++A+L  +EEK+EKK+AEY E MKNK+  +HK  EEK+A +EA +R
Sbjct: 126 FSAVGAWENSKRAAVEAELRAIEEKLEKKRAEYTEKMKNKVAEVHKLAEEKRAFVEANKR 185

Query: 166 EQCLKVEETAAKYRASGFTPKALLLKCF 193
           E+CLKVEETAAK+RASGF PK  LL+CF
Sbjct: 186 EECLKVEETAAKFRASGFKPKK-LLRCF 212

[Close]

BLAST of Cp4.1LG00g04720 vs. TrEMBL
Match: M5X106_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011367mg PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.7e-35
Identity = 87/131 (66.41%), Postives = 104/131 (79.39%), Query Frame = 1


Query: 64  ERGFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQL 123
           + G V  D  LARV  EK+L+LI+AWEESEK KAEN+A+K+LSA+ SWENTKKA+++A+L
Sbjct: 85  KEGSVNRDAVLARVATEKRLSLIRAWEESEKSKAENKAHKKLSAVGSWENTKKATVEAEL 144

Query: 124 MKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFT 183
            K+EEK+EKKKAEY E MKNKI  IHK  EEK+A IEA+R E  LK EETAAKYRA+G  
Sbjct: 145 KKIEEKLEKKKAEYVEQMKNKIALIHKAAEEKRAAIEAKRGEDLLKAEETAAKYRATGNA 204

Query: 184 PKALLLKCFSG 195
           PK  LL CFSG
Sbjct: 205 PKK-LLGCFSG 214

[Close]

BLAST of Cp4.1LG00g04720 vs. TrEMBL
Match: A0A059C173_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00569 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 6.1e-35
Identity = 80/126 (63.49%), Postives = 102/126 (80.95%), Query Frame = 1


Query: 66  GFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMK 125
           G +  D  LARVE EK+LALIKAWEESEK K +N+ YK+ S I +WENTK+A+I+A+L K
Sbjct: 77  GSIDRDAVLARVETEKRLALIKAWEESEKTKVDNKTYKKFSGIGAWENTKRAAIEAELKK 136

Query: 126 LEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPK 185
           +EEK+EKKKAEY E+MKNKIV IHK  EEK+A +EA++ E  LK+EETAAK+RA+G+TP+
Sbjct: 137 IEEKLEKKKAEYAEMMKNKIVEIHKAAEEKRALVEAKKGESFLKIEETAAKFRATGYTPR 196

Query: 186 ALLLKC 192
            LL  C
Sbjct: 197 KLLGCC 202

[Close]

BLAST of Cp4.1LG00g04720 vs. TrEMBL
Match: A0A061G4C7_THECC (Remorin family protein OS=Theobroma cacao GN=TCM_016219 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.8e-34
Identity = 80/123 (65.04%), Postives = 102/123 (82.93%), Query Frame = 1


Query: 71  DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKM 130
           D  LARVE EK+LAL+KAWEE+EK K EN+A+K++SAI SWENTKKA ++AQL K+EE++
Sbjct: 152 DSVLARVETEKRLALLKAWEENEKAKVENKAHKKISAIGSWENTKKAGVEAQLKKIEEQL 211

Query: 131 EKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKALLLK 190
           EKKKAEY E MKN++  IH++ EEK+A IEA+R E  LK+EETAAK+RA+G+TPK   L 
Sbjct: 212 EKKKAEYAEKMKNRVAEIHREAEEKRAMIEAKRGEDFLKIEETAAKFRATGYTPKK-FLG 271

Query: 191 CFS 194
           CFS
Sbjct: 272 CFS 273

[Close]

BLAST of Cp4.1LG00g04720 vs. TAIR10
Match: AT5G23750.1 (AT5G23750.1 Remorin family protein)

HSP 1 Score: 145.6 bits (366), Expect = 3.2e-35
Identity = 81/131 (61.83%), Postives = 102/131 (77.86%), Query Frame = 1


Query: 59  KEIVIER--GFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKK 118
           KE+  E+  G V  D  LARVE EK+++LIKAWEE+EK K EN+A K+LS+I SWEN KK
Sbjct: 68  KEVEEEKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKK 127

Query: 119 ASIQAQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAK 178
           A+++A+L K+EE++EKKKAEY E MKNKI  IHK+ EEK+A IEA+R E+ LK EE AAK
Sbjct: 128 AAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAK 187

Query: 179 YRASGFTPKAL 188
           YRA+G  PK L
Sbjct: 188 YRATGTAPKKL 198

[Close]

BLAST of Cp4.1LG00g04720 vs. TAIR10
Match: AT2G45820.1 (AT2G45820.1 Remorin family protein)

HSP 1 Score: 141.7 bits (356), Expect = 4.6e-34
Identity = 73/116 (62.93%), Postives = 93/116 (80.17%), Query Frame = 1


Query: 71  DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKM 130
           DV LA +E EKK + IKAWEESEK KAENRA K++S + +WEN+KKA+++AQL K+EEK+
Sbjct: 70  DVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIEEKL 129

Query: 131 EKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKA 187
           EKKKA+YGE MKNK+  IHK  EEK+A +EA++ E+ LK EE  AKYRA+G  PKA
Sbjct: 130 EKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVVPKA 185

[Close]

BLAST of Cp4.1LG00g04720 vs. TAIR10
Match: AT3G61260.1 (AT3G61260.1 Remorin family protein)

HSP 1 Score: 139.0 bits (349), Expect = 3.0e-33
Identity = 70/116 (60.34%), Postives = 94/116 (81.03%), Query Frame = 1


Query: 71  DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKM 130
           DV LA +  EK+L+ ++AWEESEK KAEN+A K+++ + +WEN+KKA+++AQL K+EE++
Sbjct: 92  DVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQL 151

Query: 131 EKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKA 187
           EKKKAEY E MKNK+  IHK+ EE++A IEA+R E  LK EETAAKYRA+G  PKA
Sbjct: 152 EKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVPKA 207

[Close]

BLAST of Cp4.1LG00g04720 vs. TAIR10
Match: AT3G48940.1 (AT3G48940.1 Remorin family protein)

HSP 1 Score: 131.7 bits (330), Expect = 4.8e-31
Identity = 69/122 (56.56%), Postives = 92/122 (75.41%), Query Frame = 1


Query: 66  GFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMK 125
           G V  D  L R+E +K+++LIKAWEE+EK K EN+A K++S++ +WEN+KKAS++A+L K
Sbjct: 50  GSVHRDAVLVRLEQDKRISLIKAWEEAEKSKVENKAQKKISSVGAWENSKKASVEAELKK 109

Query: 126 LEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPK 185
           +EE++ KKKA Y E MKNKI  IHK+ EEK+A  EA+R E  LK EE AAKYRA+G  P 
Sbjct: 110 IEEQLNKKKAHYTEQMKNKIAQIHKEAEEKRAMTEAKRGEDVLKAEEMAAKYRATGTAPT 169

Query: 186 AL 188
            L
Sbjct: 170 KL 171

[Close]

BLAST of Cp4.1LG00g04720 vs. TAIR10
Match: AT1G63295.1 (AT1G63295.1 Remorin family protein)

HSP 1 Score: 87.8 bits (216), Expect = 7.9e-18
Identity = 49/121 (40.50%), Postives = 75/121 (61.98%), Query Frame = 1


Query: 74  LARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKK 133
           L  +E EK+LALI AWEE+EK KA+ +AYK L +I+SWEN  K +++  L K+EE ++ +
Sbjct: 31  LVEIEKEKRLALIDAWEENEKAKAQTKAYKELCSIESWENNMKTALELDLKKMEENLQVE 90

Query: 134 KAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRA--SGFTPKALLLKC 193
           K E+ +  K KI  I K  E K+  IE ++ ++ +KVE+ + K  A  + + P      C
Sbjct: 91  KTEFSKKFKKKIPEIEKIAEAKREKIEKQKEQESIKVEKISEKLIATPNAYPPNTKTCGC 150

[Close]

BLAST of Cp4.1LG00g04720 vs. NCBI nr
Match: gi|659073757|ref|XP_008437236.1| (PREDICTED: remorin isoform X1 [Cucumis melo])

HSP 1 Score: 206.1 bits (523), Expect = 5.7e-50
Identity = 122/191 (63.87%), Postives = 140/191 (73.30%), Query Frame = 1


Query: 4   ADESEPDSQPPVPLQNNSLIPHVADFLSNKDKINDSGFSSSFRQTCSSKGQRKRNKEIVI 63
           AD+SEPD  PP     +  +PH        DKI+DS          + K    +++    
Sbjct: 62  ADDSEPDQPPPQNDVASISLPHT-------DKISDS----------AEKVDAAKDR---- 121

Query: 64  ERGFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQL 123
                  D+ALARVE EKK+ALIKAWEESEKIKAEN+AYKRLSA++SWENT+KASI+AQL
Sbjct: 122 -------DIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSAVESWENTRKASIEAQL 181

Query: 124 MKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFT 183
           MK+EEKMEKKKAEY E MKNKIVGIHK+GEEKKATIEAER+EQCLKVEETA KYR SGF 
Sbjct: 182 MKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQCLKVEETAEKYRTSGFI 223

Query: 184 PKALLLKCFSG 195
           PK  LLKCFSG
Sbjct: 242 PKT-LLKCFSG 223

[Close]

BLAST of Cp4.1LG00g04720 vs. NCBI nr
Match: gi|659073759|ref|XP_008437237.1| (PREDICTED: remorin isoform X2 [Cucumis melo])

HSP 1 Score: 203.0 bits (515), Expect = 4.8e-49
Identity = 121/191 (63.35%), Postives = 139/191 (72.77%), Query Frame = 1


Query: 4   ADESEPDSQPPVPLQNNSLIPHVADFLSNKDKINDSGFSSSFRQTCSSKGQRKRNKEIVI 63
           AD+SEPD  PP     +  +PH         KI+DS          + K    +++    
Sbjct: 62  ADDSEPDQPPPQNDVASISLPH---------KISDS----------AEKVDAAKDR---- 121

Query: 64  ERGFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQL 123
                  D+ALARVE EKK+ALIKAWEESEKIKAEN+AYKRLSA++SWENT+KASI+AQL
Sbjct: 122 -------DIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSAVESWENTRKASIEAQL 181

Query: 124 MKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFT 183
           MK+EEKMEKKKAEY E MKNKIVGIHK+GEEKKATIEAER+EQCLKVEETA KYR SGF 
Sbjct: 182 MKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQCLKVEETAEKYRTSGFI 221

Query: 184 PKALLLKCFSG 195
           PK  LLKCFSG
Sbjct: 242 PKT-LLKCFSG 221

[Close]

BLAST of Cp4.1LG00g04720 vs. NCBI nr
Match: gi|659073761|ref|XP_008437238.1| (PREDICTED: uncharacterized protein At3g61260 isoform X3 [Cucumis melo])

HSP 1 Score: 201.1 bits (510), Expect = 1.8e-48
Identity = 106/124 (85.48%), Postives = 116/124 (93.55%), Query Frame = 1


Query: 71  DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKM 130
           D+ALARVE EKK+ALIKAWEESEKIKAEN+AYKRLSA++SWENT+KASI+AQLMK+EEKM
Sbjct: 18  DIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSAVESWENTRKASIEAQLMKIEEKM 77

Query: 131 EKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKALLLK 190
           EKKKAEY E MKNKIVGIHK+GEEKKATIEAER+EQCLKVEETA KYR SGF PK  LLK
Sbjct: 78  EKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQCLKVEETAEKYRTSGFIPKT-LLK 137

Query: 191 CFSG 195
           CFSG
Sbjct: 138 CFSG 140

[Close]

BLAST of Cp4.1LG00g04720 vs. NCBI nr
Match: gi|449452352|ref|XP_004143923.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein At3g61260 [Cucumis sativus])

HSP 1 Score: 199.5 bits (506), Expect = 5.3e-48
Identity = 121/191 (63.35%), Postives = 138/191 (72.25%), Query Frame = 1


Query: 4   ADESEPDSQPPVPLQNNSLIPHVADFLSNKDKINDSGFSSSFRQTCSSKGQRKRNKEIVI 63
           AD+SEPD  PP     N + P     +S   KI+DS          S K    +++    
Sbjct: 3   ADDSEPDQPPP----QNDVAP-----ISLPHKISDS----------SEKIDAAKDR---- 62

Query: 64  ERGFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQL 123
                  D+ALARVE EKK+ALIKAWEESEKIKAEN+AYKRLSA++SWENT+KASI+AQL
Sbjct: 63  -------DIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSAVESWENTRKASIEAQL 122

Query: 124 MKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFT 183
           MK+EEKMEKKKAEY E MKNKIVGIHK+GEEK ATIEAER+E CLKVEETA KYR SGF 
Sbjct: 123 MKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKXATIEAERKEHCLKVEETAEKYRTSGFI 162

Query: 184 PKALLLKCFSG 195
           PK  LLKCFSG
Sbjct: 183 PKT-LLKCFSG 162

[Close]

BLAST of Cp4.1LG00g04720 vs. NCBI nr
Match: gi|459680680|gb|AGG82489.1| (remorin 2 [Datisca glomerata])

HSP 1 Score: 169.1 bits (427), Expect = 7.7e-39
Identity = 91/128 (71.09%), Postives = 106/128 (82.81%), Query Frame = 1


Query: 66  GFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMK 125
           G +  D  LARVE EK+LALIKAWEESEK +AEN+A+K+LSAIDSWEN KKAS++AQL K
Sbjct: 60  GSIDRDAVLARVETEKRLALIKAWEESEKTRAENKAFKKLSAIDSWENRKKASVEAQLRK 119

Query: 126 LEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPK 185
           +EEK+EKKKAEYGE MKNK+V +HK  EEK+A +EA R EQ LKVEETAAKYRA+GF PK
Sbjct: 120 IEEKLEKKKAEYGEQMKNKMVEVHKAAEEKRAVVEASRGEQFLKVEETAAKYRAAGFAPK 179

Query: 186 ALLLKCFS 194
             L  CFS
Sbjct: 180 K-LFGCFS 186

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g04720 vs. Swiss-Prot


Match Name	E-value	Identity	Description
REMO_SOLTU	4.8e-33	60.80	Remorin OS=Solanum tuberosum PE=1 SV=1	[more]
REMO_ARATH	8.2e-33	62.93	Remorin OS=Arabidopsis thaliana GN=DBP PE=1 SV=1	[more]
Y3126_ARATH	5.3e-32	60.34	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana GN=At3g61260 PE=1 SV=1	[more]

BLAST of Cp4.1LG00g04720 vs. TrEMBL


Match Name	E-value	Identity	Description
T1R3E6_DATGL	5.4e-39	71.09	Remorin 2 OS=Datisca glomerata GN=REM2 PE=2 SV=1	[more]
W9R3C7_9ROSA	1.6e-35	56.76	Pollen-specific protein SF3 OS=Morus notabilis GN=L484_024314 PE=4 SV=1	[more]
M5X106_PRUPE	4.7e-35	66.41	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011367mg PE=4 SV=1	[more]
A0A059C173_EUCGR	6.1e-35	63.49	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00569 PE=4 SV=1	[more]
A0A061G4C7_THECC	1.8e-34	65.04	Remorin family protein OS=Theobroma cacao GN=TCM_016219 PE=4 SV=1	[more]

BLAST of Cp4.1LG00g04720 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23750.1	3.2e-35	61.83	Remorin family protein	[more]
AT2G45820.1	4.6e-34	62.93	Remorin family protein	[more]
AT3G61260.1	3.0e-33	60.34	Remorin family protein	[more]
AT3G48940.1	4.8e-31	56.56	Remorin family protein	[more]
AT1G63295.1	7.9e-18	40.50	Remorin family protein	[more]

BLAST of Cp4.1LG00g04720 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659073757\|ref\|XP_008437236.1\|	5.7e-50	63.87	PREDICTED: remorin isoform X1 [Cucumis melo]	[more]
gi\|659073759\|ref\|XP_008437237.1\|	4.8e-49	63.35	PREDICTED: remorin isoform X2 [Cucumis melo]	[more]
gi\|659073761\|ref\|XP_008437238.1\|	1.8e-48	85.48	PREDICTED: uncharacterized protein At3g61260 isoform X3 [Cucumis melo]	[more]
gi\|449452352\|ref\|XP_004143923.1\|	5.3e-48	63.35	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein At3g61260 [Cucumis sativ...	[more]
gi\|459680680\|gb\|AGG82489.1\|	7.7e-39	71.09	remorin 2 [Datisca glomerata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005516	Remorin_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG00g04720.1	Cp4.1LG00g04720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 82..185 score: 1.2
None	No IPR available	unknown	Coil	Coil	coord: 116..143 scor
None	No IPR available	PANTHER	PTHR31775	FAMILY NOT NAMED	coord: 71..194 score: 3.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG00g04720	Cucsa.302930	Cucumber (Gy14) v1	cgycpeB0787
Cp4.1LG00g04720	CmaCh02G014720	Cucurbita maxima (Rimu)	cmacpeB597
Cp4.1LG00g04720	CmoCh02G015070	Cucurbita moschata (Rifu)	cmocpeB543
Cp4.1LG00g04720	Cla011469	Watermelon (97103) v1	cpewmB012
Cp4.1LG00g04720	Csa5G154830	Cucumber (Chinese Long) v2	cpecuB014
Cp4.1LG00g04720	MELO3C005653	Melon (DHL92) v3.5.1	cpemeB002
Cp4.1LG00g04720	ClCG01G002930	Watermelon (Charleston Gray)	cpewcgB008
Cp4.1LG00g04720	CSPI05G05650	Wild cucumber (PI 183967)	cpecpiB012
Cp4.1LG00g04720	Lsi09G002820	Bottle gourd (USVL1VR-Ls)	cpelsiB000
Cp4.1LG00g04720	MELO3C005653.2	Melon (DHL92) v3.6.1	cpemedB002
Cp4.1LG00g04720	Bhi12G000224	Wax gourd	cpewgoB0005
Cp4.1LG00g04720	CsGy5G002910	Cucumber (Gy14) v2	cgybcpeB578
Cp4.1LG00g04720	Carg02515	Silver-seed gourd	carcpeB1266

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG00g04720	Cp4.1LG05g03460	Cucurbita pepo (Zucchini)	cpecpeB012

The following block(s) are covering this gene:

None