Cp4.1LG05g01720 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG05g01720
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	pale cress protein (PAC)
Location	Cp4.1LG05 : 40956 .. 48301 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGGAGCCCCTTGTCCTTTAATCCGTTCGTGCAAGCATCCAAGTCCTTTCCCTCCCTGCTGGTTGTTTCGGAACTATAATGTTGGCACAGGTGCTTTGGCTGAGATGCTCACCAGTTCCACCATTACCCTCTGCTTCCCCAACCTTACCGAAGCTTTCGACCTCCTATTTCTTAAAGCTTTATTCATCTCGTCCTGGTTAGCTCTCTTGCAGCTTGTTTATTCACTCTTCAGATACTGAATTTATCGTAACTTCTCATTTTGGTGGTTTTGGTGATTTTGATGGTCAGTTTTAAGGAGGAGCTTGAGCAAGGAAGAGCCGCTTATTGATGGGCTTCCCAAAGAGTATTACGATGATGTACGTGGATATTTGAATTTAACTACTCCCTAATTTGCATTTTCGGTTGATTGAGCTTCTACTTCTTCATCTATTTCTTCTTGTTTGCTATTTATTTGTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTCCTTCTCTCTGGTGGTTTGGAAAAGGGTTAACACTTGACAGAGATGAAAATGATTGATTTTCCGAGTGACACATGCCTGTTATATAGAACCTGCTGAAGCTGAAACACTTTCGAACATAAATAAAAGACAATTTTAGGGGAAGTTTCCTGTTCTCCAAAATGTTTTGGAAAAACTTATTTATTTTTACACACCAAATCCTCACTCTAATTATTTCGTCATCTTCCTTTCTGGCTGACCAAAAACTTGCGACCATGGTTAAACGTCGTAAAAGAACTTGTGTTTCCTATTTACTAATTATACTGATGTGGCCCAAAATTCGTGATCATGAGAGCGAGGGAGGGGGGAAAAGAAAAGAGGAAGAACAATGAAGCAGGGGAAATGAGAGGGAAAGACAGCACGAATGAAAGTATAGGAAAATAAGTTGAAAGGTTATTTTACAAAGCTGATAGATGCAAATTTTGTTCGATCTCTTTAATGTTGAGGGTGGATAGATTTCTTCGAGGTAGTAGAAGCATAGTGGTAGCCACCAGAGAGAATCAATGCATTTTTCTTTTAACTGACCATCAGAAAGAAAATATATTGGTCAAAGAAATAGAGTGAGCATTTTGGTTCAAAGAAACTAATTATATATATTTATATTTCCTGAGCTATTGGTGAATGGGTCAGGAAAAAAGAAACAGGGGTGGCTACTAAATTGGATTAGGATTTCCTCGAAGAGAATCATCGTCAAAAAAGGGTTTGAGAACAAGGGGATACGATAGATGCGGGTGTATATCCCCCACAACATTTTCCATTATAAATGGCAAGCCAAGAGGCGAATTTGATGCATTTAGAGGCCCATGCCAAAGAGACCGCCCTCGATTATTGATCAATGCAACATTGGACCCGACAAAGTAAACCGTACTAAAATCTTACTCCCTTCCTCTTTAGTCAACTTTGCATCAGAAGACATGCTTCCCAACTGTGTTATAGAATTAGACAATGAATCATTTTTGAGTTTAAGTAGCTTGAAAATTGACTGTCAGCCAGTCTGCAAGTATAATGATGATGCCATTGCTGAAGACTCATTGTTTTGAAGGTCTAGTCTCTCTTTTTCAGACACCTGGTAATCTGAATGTTTCTGAAATTATTGTGCCAGTAGGAAAACAGGCTTTAGACAATGATTTTCTATCTGCATCACATTCCGGTTTGCACAATTTTTCTTCTATGATTAAGGCTAGTAGTGTACAATTCCGTGAAATTATTCCCTCTTTTCCAAAGGCGACCAGTCAGAAAAATTAATTGAAGTTGGAATCCCTCTTTGATATACTATAAACATTTTTTCTTGGAACACCAGGGTCTGGGAAATGGATCCAACGAAGGAGTCTGAAGATTTTTTGTGAAGCATTTGCCCCGATAGTGTTGACTCAAGATTTCAATTTGTCATCAGTAGCTCAAAAGATTGTAGAATCTTTATGTAAAATCTTTATGGGGTTCAAAAGGTATTAATTGGGTTCAGGTGGAATCCTTGGGATGTTTGGGAGGTTTGCTAGTTTTGTGGATTGAAAGCAAGGTGAGCTTGGAATNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAAAGCAAAGAGGGTGGAAAGGTATCACATTTTGAGCTTTAGTCTTTTTCATTTTTTAATAATTTTTTTTTTTGTTTCTTGTTAAAAAAGAAAAAAAAAATAGTACATAGTGTTATAACATATATGATATTATGCATAGTTGTCTTTTATTGTAATATATAGGTTCAACGAGCTCAACAAGAGAAGATGAGTGTCACGAGCTTTCTTAATGGACATTCGTATGAATTCAGGATCACTAAATCACAAATTCTCTGCCTCTGAGACCCCTTATTTGGACGAAACCTTTATTAGAGTCCTTCGTGCGTAAAATCCTCCATCTGGTTCATCTAGTTCTCAAGTTTAACAATACTCTAATTAGTCGGAATGATTCTAAGGTTGCTAAGGGGATGAGCATCAATACTCAGAGACTTGGTTCCGATAATCAGCGACAAGATTTTTGTAGGAGATTGTATGTAACAACTGTCGTAAGTTTGGTCATATGAAACATGACTATCGTAAGTTCTTGAATAAGGGTCAAAGACCTCAAGTTGCTCACGTTGCCTCCACCAATGATATATCTGAGAGATCGGTTACTATTTCTTTTGATGGTTTTGCCAAATTCCAATTGCATCAGAAATAATATAATCGCATGCATCATTGAATCCTATTGCAACCCTTCCAATGTCTTCTTACATCCTCTATTAAACGGGTCATAGACTCCGGTGCCACGACCCATGTGACATACAATTCTAGCTTATTTCCTACTTCTTTGTCACATGCACCTTCTCTGGCTGTCACTTTCGCATATAAATCAACATCCTTTATTCTTGGATATGACGTCATTAATTCCACACCCTCTATCCCTTTAGCTTCTGTTTTACATTTGCTTCGACGCTTTTTAACTTGATTTCTTTTTGTGAACTCACTTGTGACCTTAATTGTTTTGTCTATTTTTTCTCTGGCTATTTCTTGTTTGGGGATCATATGACGAAGAAGATTATTGGTACAGGATATGAATTTGGAGGTCCATTCATTTTTTTATCACTAGAAACTGAATGTTCTCGCCTCCTCTGGCACTGCATCCTCGTTTGATGTTCATTAACGTTCTTTTTGTTACATTTTTTTCAGTGTGGGCTTTATAAAGCTTTTTGTAGTTACTTTATTGATGATGTTTTGGCTAAATAGAAGGCTTTCTTGTAACCTTATTTAACTTCGGAGTTGGCCTCCTCTTCTTTTGCATTTTTCGTTAATCGTGTTTTTTTTATTAAAAAAAGGAAAATGTTTAAAAAAATCAGATATTAACCTGTTCTACCATAGGAATGGCAAGCCCGACAAAGAGAGAAGACAAAGGAGTTACATCGAAGGCGTCAAGAGGAAGATGAAGAAGAGGAAAGAAAGGTAGAAGAATATCGTGAGATTGGGATGCGTCTGAAAGGATTTCCCGAAGAAGATGTCATAAAAGCTAGAAAACTGGTTTCAAGCTTTATTAGAGCTGTTGAAGAAGTTGAAGAGGTAATCAACTATTGTGTTAATGTATTGATATAACTCATTAGCTTAAACTTTTGGATTGATTGGTAATTTAACATGCTATCAAAGTAGAAGGTCCTGTGTTCGAACTTTTGTAATATAATTTCCTCTCGAGTAAGTATTGATTCCCATTTGTTAGGTCTTCTTTAAATTTTCAAGTCCACAAGTGAAAAGGAATAGTATTGATATTAGATTAAATTTACCATAACCCATTAGGTTAAGTTTTTAAGTTTTGGGTTGATTGATGTAACATTATGCTACTATTAATCATTAACTTGATCTTTCAAGAAGTAGGGTGTTGTCTTCGAATCAGCATGAAGTTTTCTTGTTCTTGCTTTTGGCGAAGTTTTTATGACAATACACTAAAAGATAGCTTAAGCAAACACAAACCATGAGTTCTCAACTAAACAAGTAGAGTTTGCTTACTAGAGCCTGCACAGTGACTTGGCTATGGTTTGCGAATGAAGGATATTTAGGGTTTTTTATTAGTATATTCTTCTTAGGTATGATTATAGTGTTCTATTCATGGGTAGTATTCATGGTGATTTTTCTTTGAATTTGTCTAATTTCGTACCATTTTTCACATAAAGCTTCTGACTATTAAATTATTGCAGAACTGGCTTATTGACTTTCTGATACTATATTTTATCAATTGGAATGCAGAAAATTGAGGAAGCTGCTGAGAAAGGGGAACTAACAGAGCTTGTTCTATTAGTCATATGGAATCGACTTGATTTAGCACGTCGTGATGTATATTAGTCTTCAAATTCCTTTAATTTTCATTCACTTTGTATATTTTGTAGGGAGCCTAGTTGTATGTGCTTACTTGTAATTGGCTCTTTCTTCAGGATGAAAAGGATGCAATTAGAAGTCTTGATTTGCTATATCGAAGGGTTGAGGTATGAACATGTTCAAAACTGTTTTAAATATGCCATATTGATTACGAGCTTAGAGAACACTCATTCAAATCCACACACGTACATGCAAGTTTTGCAATTTTAGGTCAAGGAAAAGGTTCTTAACTTGTCCCCAAGGATCATTCTTAAATTTATCTATCTATAGCAGTTGTAATAGGGTCTTGTGCTCATGATTTGCTGAAACATTTTTTTTTAATCTTTTAGGTGTTTTTATCACTCCGTCCATTTTTTTTACACAATCCATTTTAGATCCTGTCTTACCAGTGAAATGGTTTTTAGTTACAGGTTGTAACTTGCGGCACTTTTCTATTCAAGTCATCTCACTAATCTTTACACCAGCATTGCTTTTTTCTTTTCCTTCAATTTTATTCTGGAAAAAGCAAGAATGTGTATTCTCCTAGTAATTCATGTTCTAAGTTTCCTCAATATTTTAGACTGAAATTCTCAAACGAGAGGCTAGTCCTGCCATGAGACTTCTCAACGATCTTCTGAATATGTATGACAACTTCAACGATGAAGGATGGCTAAAAGACTGCAGAAAACGCATGATTGATACCTTCCCGCGGGAGGATCCATTTAGCATTCTCGTTCCAGCTGGATTCGACATCGACAAGGTATACTTGTGTAAATATGATAGCTCAATTGGTTTCCAACGAGATGTAGATGATAAAGTTTAAGGAATGTCTAAACTGAGTCGGCTTTTATTCCATTTTGTCTTAATGATTAGCATCAAGGGCAGTTACGGCCATCACTTGACGTTGAAGCTGATAATACACTGTTGAGAGTAGACTTCGTCAGAGAGGTTGATGAATTGCTACAAGAAGTCAGGGCGGATCAGAGTGAAGTGCAAAATGCAAATGCAGATGGTTTTGACGCGGAATCGGTGGCAAGTAGGTTGAAACATCAGGAGAAACAACGGACCGTAAGGTTGGTAGAAACGCTGCTAGAGTTGGCTATGAATTTAGAGTGGTAGGGTAGGCACAAGAATGAAATGGGCGTAGGATTTTAGTGGAAAAGAGAAGAATTTTAGGTTGCCCCAATATTCAAGTATCCACGTCCACGTTTGGTTTTTAAGAATGTTTCTAATAAACCTAGTCGAACTTTAACCATATCGTTGTCTTAAAATGAATTGATGTTGAAATAGGAACACAAAATTTAAATTTATTATTGAAACAACCTGGTTCTGGTGTAGATATTAATACAAGTAGCCCTGATTTGTGATGATTATTTTGAAGCAATAAGGCACGTGTATTTGAGAAGAGAAAATTAGCAGAGGATGATGGGTGGAAAGCCCTGACTCACTGGGCATTGTAATGAAATGAAATGAGAAAAAAAGAATATAAATGGCAAAAGTCCAAGCTACTCTAATTTAAAAAGAGAAAGAAAAGTGATTGTGATTAGAATACTCGTAATCGCTGGTGTTGGAAACAGAATTGTAGGTTGCAAGGGAGACCACTGAGCGTCGTACCAAAACCAAACAGCCAACACCATGCTTCCTCGAGTCTGCCTGTCTTCACCCTTACTGCTTATACCTTAGCCCCCCTCCTATTTTCTACATCAGTTTCTAACTTTTTTTTTGATCGGCTTCTCCGCTTTGCTTTGGCCTACGAACTGCCCAAATGCAAATCCCATTCTAATCTGTGGTGTGGACGCGGACCTCTCCGCGACTATCTACTATCTCCTCCCCCGTGGAGCTCGCGCTTTCATCTGTCACCGTCCGGTCTTCAAACCCAATCTCACGAACTTCTCTGTGACACTCCGCCGCCGCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCTCTTCCTCGTTGTTAGCCCTGTCTTCCTCCGATGATAGAGGAACGAGCCAACAAGAGCCATGCAAATGGCCGTTCACGCACACGAAATATTCGAGGCCTCCATCATGCGTCCCAAGCCGCCTAGCCGCGCTTTTGGGTACGAGTCGAGCGGATGTCATACTCCACACCCGAGCCCCACAATATGGGCATCTGGTCCTCTCTTCCAACCTCACTTGCCGTCTGATCAAGAATGCCCTAGTCTTCGATCTCATAAATCCCCGAAATACCCCTCTGTAGATCCCCAAATCATCCTCGTCGCTCCCGTTGGAATGCTCACAGGGATCGCTCACGTACAGCAAGTCTCCTCGACATTTCTTGGTGAGAAAGCTTCGGCCTGAGGTTTTGGAGAAGCGAGACTCGTGGACGAAATGTCCGGGCAGGGGCTGGGCGACCCTGAAATGGCGGCTGGACTGGCAGCCGCAGCAGAAGAACATTAGCTTGGCGAGCGCGTTCCATCCACCGCCGACTCGGGCATTGGGAGCCCCGGTGGTCAATGTGGCCACCATTCGGGGAGCTCGATTGAGACAGAGCTGGCGCCAGAGCAGTCTGTCGGCTATGGCTCGAAGTTTACAATTGAGGGAGGCGGTGATGCAAAGCGTCTGTAAGTCCCACTTGATTGTTTGAAATACGAGGAGAAGTATGCGCTCGTTGAGGATACCGGAGTCGTTGGAGTCGGAGCCCTGAGGCGACGGAGAGGGTCTGACCCTCCTGTTGCTGTTGGCGTTCATTTTTATTCAGTCTTGGGGGAAAAGAAAAATGTGGCCAATGCCAATTGCGAAAGACAAGAACCCACTCCAATATATGTCTGAAGTCTACTACGGGTATAGAACACTCAAATCAGACACGTGTCCCTTTGGTGATTGGTCACTTTATTATAGCCTGCGATCCTGAGGAAACGTGTGGGGAACCAATTGGAGGAGAGGACACGCGTGGGGATGTGATTGGTGGAATTGAGAA

mRNA sequence

TGAGGAGCCCCTTGTCCTTTAATCCGTTCGTGCAAGCATCCAAGTCCTTTCCCTCCCTGCTGGTTGTTTCGGAACTATAATGTTGGCACAGGTGCTTTGGCTGAGATGCTCACCAGTTCCACCATTACCCTCTGCTTCCCCAACCTTACCGAAGCTTTCGACCTCCTATTTCTTAAAGCTTTATTCATCTCGTCCTGTTTTAAGGAGGAGCTTGAGCAAGGAAGAGCCGCTTATTGATGGGCTTCCCAAAGAGTATTACGATGATGAATGGCAAGCCCGACAAAGAGAGAAGACAAAGGAGTTACATCGAAGGCGTCAAGAGGAAGATGAAGAAGAGGAAAGAAAGGTAGAAGAATATCGTGAGATTGGGATGCGTCTGAAAGGATTTCCCGAAGAAGATGTCATAAAAGCTAGAAAACTGAAAATTGAGGAAGCTGCTGAGAAAGGGGAACTAACAGAGCTTGTTCTATTAGTCATATGGAATCGACTTGATTTAGCACGTCGTGATGATGAAAAGGATGCAATTAGAAGTCTTGATTTGCTATATCGAAGGGTTGAGACTGAAATTCTCAAACGAGAGGCTAGTCCTGCCATGAGACTTCTCAACGATCTTCTGAATATGTATGACAACTTCAACGATGAAGGATGGCTAAAAGACTGCAGAAAACGCATGATTGATACCTTCCCGCGGGAGGATCCATTTAGCATTCTCGTTCCAGCTGGATTCGACATCGACAAGCATCAAGGGCAGTTACGGCCATCACTTGACGTTGAAGCTGATAATACACTGTTGAGAGTAGACTTCGTCAGAGAGGTTGATGAATTGCTACAAGAAGTCAGGGCGGATCAGAGTGAAGTGCAAAATGCAAATGCAGATGGTTTTGACGCGGAATCGGTGGCAAGTAGGTTGAAACATCAGGAGAAACAACGGACCGTAAGGTTGGTAGAAACGCTGCTAGAGTTGGCTATGAATTTAGAGTGGTAGGGTAGGCACAAGAATGAAATGGGCGTAGGATTTTAGTGGAAAAGAGAAGAATTTTAGGTTGCCCCAATATTCAAGTATCCACGTCCACGTTTGGTTTTTAAGAATGTTTCTAATAAACCTAGTCGAACTTTAACCATATCGTTGTCTTAAAATGAATTGATGTTGAAATAGGAACACAAAATTTAAATTTATTATTGAAACAACCTGGTTCTGGTGTAGATATTAATACAAGTAGCCCTGATTTGTGATGATTATTTTGAAGCAATAAGGCACGTGTATTTGAGAAGAGAAAATTAGCAGAGGATGATGGGTGGAAAGCCCTGACTCACTGGGCATTGTAATGAAATGAAATGAGAAAAAAAGAATATAAATGGCAAAAGTCCAAGCTACTCTAATTTAAAAAGAGAAAGAAAAGTGATTGTGATTAGAATACTCGTAATCGCTGGTGTTGGAAACAGAATTGTAGGTTGCAAGGGAGACCACTGAGCGTCGTACCAAAACCAAACAGCCAACACCATGCTTCCTCGAGTCTGCCTGTCTTCACCCTTACTGCTTATACCTTAGCCCCCCTCCTATTTTCTACATCAGTTTCTAACTTTTTTTTTGATCGGCTTCTCCGCTTTGCTTTGGCCTACGAACTGCCCAAATGCAAATCCCATTCTAATCTGTGGTGTGGACGCGGACCTCTCCGCGACTATCTACTATCTCCTCCCCCGTGGAGCTCGCGCTTTCATCTGTCACCGTCCGGTCTTCAAACCCAATCTCACGAACTTCTCTGTGACACTCCGCCGCCGCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCTCTTCCTCGTTGTTAGCCCTGTCTTCCTCCGATGATAGAGGAACGAGCCAACAAGAGCCATGCAAATGGCCGTTCACGCACACGAAATATTCGAGGCCTCCATCATGCGTCCCAAGCCGCCTAGCCGCGCTTTTGGGTACGAGTCGAGCGGATGTCATACTCCACACCCGAGCCCCACAATATGGGCATCTGGTCCTCTCTTCCAACCTCACTTGCCGTCTGATCAAGAATGCCCTAGTCTTCGATCTCATAAATCCCCGAAATACCCCTCTGTAGATCCCCAAATCATCCTCGTCGCTCCCGTTGGAATGCTCACAGGGATCGCTCACGTACAGCAAGTCTCCTCGACATTTCTTGGTGAGAAAGCTTCGGCCTGAGGTTTTGGAGAAGCGAGACTCGTGGACGAAATGTCCGGGCAGGGGCTGGGCGACCCTGAAATGGCGGCTGGACTGGCAGCCGCAGCAGAAGAACATTAGCTTGGCGAGCGCGTTCCATCCACCGCCGACTCGGGCATTGGGAGCCCCGGTGGTCAATGTGGCCACCATTCGGGGAGCTCGATTGAGACAGAGCTGGCGCCAGAGCAGTCTGTCGGCTATGGCTCGAAGTTTACAATTGAGGGAGGCGGTGATGCAAAGCGTCTGTAAGTCCCACTTGATTGTTTGAAATACGAGGAGAAGTATGCGCTCGTTGAGGATACCGGAGTCGTTGGAGTCGGAGCCCTGAGGCGACGGAGAGGGTCTGACCCTCCTGTTGCTGTTGGCGTTCATTTTTATTCAGTCTTGGGGGAAAAGAAAAATGTGGCCAATGCCAATTGCGAAAGACAAGAACCCACTCCAATATATGTCTGAAGTCTACTACGGGTATAGAACACTCAAATCAGACACGTGTCCCTTTGGTGATTGGTCACTTTATTATAGCCTGCGATCCTGAGGAAACGTGTGGGGAACCAATTGGAGGAGAGGACACGCGTGGGGATGTGATTGGTGGAATTGAGAA

Coding sequence (CDS)

ATGTTGGCACAGGTGCTTTGGCTGAGATGCTCACCAGTTCCACCATTACCCTCTGCTTCCCCAACCTTACCGAAGCTTTCGACCTCCTATTTCTTAAAGCTTTATTCATCTCGTCCTGTTTTAAGGAGGAGCTTGAGCAAGGAAGAGCCGCTTATTGATGGGCTTCCCAAAGAGTATTACGATGATGAATGGCAAGCCCGACAAAGAGAGAAGACAAAGGAGTTACATCGAAGGCGTCAAGAGGAAGATGAAGAAGAGGAAAGAAAGGTAGAAGAATATCGTGAGATTGGGATGCGTCTGAAAGGATTTCCCGAAGAAGATGTCATAAAAGCTAGAAAACTGAAAATTGAGGAAGCTGCTGAGAAAGGGGAACTAACAGAGCTTGTTCTATTAGTCATATGGAATCGACTTGATTTAGCACGTCGTGATGATGAAAAGGATGCAATTAGAAGTCTTGATTTGCTATATCGAAGGGTTGAGACTGAAATTCTCAAACGAGAGGCTAGTCCTGCCATGAGACTTCTCAACGATCTTCTGAATATGTATGACAACTTCAACGATGAAGGATGGCTAAAAGACTGCAGAAAACGCATGATTGATACCTTCCCGCGGGAGGATCCATTTAGCATTCTCGTTCCAGCTGGATTCGACATCGACAAGCATCAAGGGCAGTTACGGCCATCACTTGACGTTGAAGCTGATAATACACTGTTGAGAGTAGACTTCGTCAGAGAGGTTGATGAATTGCTACAAGAAGTCAGGGCGGATCAGAGTGAAGTGCAAAATGCAAATGCAGATGGTTTTGACGCGGAATCGGTGGCAAGTAGGTTGAAACATCAGGAGAAACAACGGACCGTAAGGTTGGTAGAAACGCTGCTAGAGTTGGCTATGAATTTAGAGTGGTAG

Protein sequence

MLAQVLWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVIKARKLKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFSILVPAGFDIDKHQGQLRPSLDVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKHQEKQRTVRLVETLLELAMNLEW

Homology

[Close]

BLAST of Cp4.1LG05g01720 vs. Swiss-Prot
Match: PAC_ARATH (Protein PALE CRESS, chloroplastic OS=Arabidopsis thaliana GN=PAC PE=2 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 3.4e-102
Identity = 201/315 (63.81%), Postives = 242/315 (76.83%), Query Frame = 1


Query: 1   MLAQVLWLRC-SPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEY 60
           M A  L L C SP+   P       KL+T   L + +++   R S + +E L++G+P EY
Sbjct: 1   MAATSLVLTCASPLFSSPRVISATKKLTTE--LSISTAKFRRRCSGNNDEVLLEGMPPEY 60

Query: 61  YDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVIKARKL----- 120
           YDDEWQARQREKTKEL R ++EE+EEEERK+EEYREIG RLK FPE+D+ KARKL     
Sbjct: 61  YDDEWQARQREKTKELRRMQREEEEEEERKIEEYREIGTRLKEFPEQDLRKARKLVSSFI 120

Query: 121 --------KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKR 180
                   +IEEAAEKGEL ELVL++IWNRLDLARRDDEKDAIRSLDLLYRRVETEILKR
Sbjct: 121 RAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKR 180

Query: 181 EASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFSILVPAGFDIDKHQGQLR 240
           +ASPAM+LLNDLLNM+D F D+ WLKDCRKRM +TFPREDPFSIL+P GFDID HQGQLR
Sbjct: 181 QASPAMKLLNDLLNMHDGFEDDAWLKDCRKRMAETFPREDPFSILMPPGFDIDMHQGQLR 240

Query: 241 PSLDVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKHQEKQRTV 300
           P ++ E DNTLLRVDFVREVD LLQEVR ++     +  +G D E++A + K QEKQRT+
Sbjct: 241 PPIETETDNTLLRVDFVREVDALLQEVRIEEDATTGSKGEGLDPEAIALKFKQQEKQRTI 300

Query: 301 RLVETLLELAMNLEW 302
           R +E +L+LA+NL+W
Sbjct: 301 RQIEAILDLALNLKW 313

[Close]

BLAST of Cp4.1LG05g01720 vs. TrEMBL
Match: A0A0A0KJC6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G408790 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 4.3e-128
Identity = 256/314 (81.53%), Postives = 271/314 (86.31%), Query Frame = 1


Query: 1   MLAQVLWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY 60
           M AQ+L LR S +PPL S +P LPKL TS      SS  VLRRSLSKEEPLIDGLPKEYY
Sbjct: 1   MEAQLLCLRFSSLPPLLSTTPILPKLWTSPSSHRCSSGLVLRRSLSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVIKARKL------ 120
           DDEWQARQREKTKELHRRRQEEDEEE+RKVEEYREIGMRLK FPEEDV KARKL      
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVEEYREIGMRLKEFPEEDVRKARKLVSSFIR 120

Query: 121 -------KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRE 180
                  KIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKRE
Sbjct: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180

Query: 181 ASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFSILVPAGFDIDKHQGQLRP 240
           A+PAMRLLN+LLNMYD F++EGWLK CRK M+DTFPREDPFSILVPAGFDIDKHQG LRP
Sbjct: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240

Query: 241 SLDVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKHQEKQRTVR 300
           SL VE+DNTLLRVDFVREVDELLQEV A QS+VQN NAD FDAESVASRLK QEKQRT+R
Sbjct: 241 SLAVESDNTLLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIR 300

Query: 301 LVETLLELAMNLEW 302
           LVE LL+LAMNL+W
Sbjct: 301 LVEALLDLAMNLKW 314

[Close]

BLAST of Cp4.1LG05g01720 vs. TrEMBL
Match: D7TPC4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0104g00380 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 4.3e-112
Identity = 227/319 (71.16%), Postives = 261/319 (81.82%), Query Frame = 1


Query: 1   MLAQVLWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRP-----VLRRSLSKEEPLIDGL 60
           M A+   L C+P+PP P  + T+ +++       ++S+P     VLRRS +KEE  + GL
Sbjct: 1   MEAKAFRLLCAPLPPSPQPTSTVGRITIPLKPSPFNSKPPSGAGVLRRSKNKEEQELYGL 60

Query: 61  PKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVIKARKL- 120
           PKEYYDDEWQARQREKTKELHRRRQEE+EEEERKVEEYREIG+RLKG+PEE+V KA+KL 
Sbjct: 61  PKEYYDDEWQARQREKTKELHRRRQEEEEEEERKVEEYREIGLRLKGYPEEEVKKAKKLV 120

Query: 121 ------------KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETE 180
                       KIEEAAEKGELTELVL+VIWNRLDLARRDDEKDA+RSLDLLYRRVETE
Sbjct: 121 SSFIRSAEEVEEKIEEAAEKGELTELVLMVIWNRLDLARRDDEKDAVRSLDLLYRRVETE 180

Query: 181 ILKREASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFSILVPAGFDIDKHQ 240
           ILKREASPAMRLLNDLLNM+D F+DEGWLK C+K MIDTFPREDPFSILVPAGF+ID+HQ
Sbjct: 181 ILKREASPAMRLLNDLLNMHDGFDDEGWLKKCKKCMIDTFPREDPFSILVPAGFNIDEHQ 240

Query: 241 GQLRPSLDVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKHQEK 300
           G+LRP L+V  D+ LLRVDFVREVD LLQEVR +QSE QNA   G D ESVASRLK QEK
Sbjct: 241 GKLRPPLEV--DDPLLRVDFVREVDALLQEVRPEQSEAQNAQ--GLDPESVASRLKQQEK 300

Query: 301 QRTVRLVETLLELAMNLEW 302
           Q+T+R VE LL+LA+NL+W
Sbjct: 301 QQTIRQVEALLDLAINLKW 315

[Close]

BLAST of Cp4.1LG05g01720 vs. TrEMBL
Match: M5VXJ3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009042mg PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 1.5e-109
Identity = 225/315 (71.43%), Postives = 259/315 (82.22%), Query Frame = 1


Query: 1   MLAQVLWLRCSPVPPLP-SASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEY 60
           M A+V  L C+ +P  P S+S +  +L  S F   ++ +   +   SKEEPL++GLPKEY
Sbjct: 1   MEARVFPLTCTALPLSPASSSSSHGRLWPSPFKPKHAPKTGTK---SKEEPLLEGLPKEY 60

Query: 61  YDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVIKARKL----- 120
           YDDEWQARQREKTKELH+RRQEEDEEEERKVEEYREIGMRLKG+PEEDV KARKL     
Sbjct: 61  YDDEWQARQREKTKELHQRRQEEDEEEERKVEEYREIGMRLKGYPEEDVRKARKLISSFI 120

Query: 121 --------KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKR 180
                   KIEEAAEKGELTELVL+VIWNRLDLARRD+EKD IRSLDLLYRRVE EILKR
Sbjct: 121 RAAEEVEEKIEEAAEKGELTELVLMVIWNRLDLARRDEEKDVIRSLDLLYRRVEAEILKR 180

Query: 181 EASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFSILVPAGFDIDKHQGQLR 240
           EA+PAMRLLNDLLNM+D ++ EGWLK+C+KRM+DTFPREDPFSILVP GFDIDKHQG LR
Sbjct: 181 EATPAMRLLNDLLNMHDGYDGEGWLKECKKRMVDTFPREDPFSILVPEGFDIDKHQGPLR 240

Query: 241 PSLDVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKHQEKQRTV 300
             L +EAD+ LLRVDFVREVD LLQEV+A+Q+EVQ  NA G DAES+ASRLK QEKQR +
Sbjct: 241 --LPLEADDVLLRVDFVREVDALLQEVKAEQNEVQ--NAQGLDAESIASRLKQQEKQRAI 300

Query: 301 RLVETLLELAMNLEW 302
           RLVE +L+LA+NL+W
Sbjct: 301 RLVEAVLDLAINLKW 308

[Close]

BLAST of Cp4.1LG05g01720 vs. TrEMBL
Match: W9QKP8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025030 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 4.5e-109
Identity = 225/318 (70.75%), Postives = 255/318 (80.19%), Query Frame = 1


Query: 1   MLAQVLWLRCSP--VPPLPSASPTL--PKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLP 60
           M  QVL L C+P   PP P ++     P L  S  +     R VLRRS+SK+EPL++GL 
Sbjct: 1   MECQVLRLTCAPRVAPPHPPSTVARQPPSLFPSPLMLNSPPRAVLRRSVSKDEPLLEGLQ 60

Query: 61  KEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVIKARKL-- 120
           KEYYDDEWQ RQREKTKELHRRRQEE+EEEERKVEEYREIGMRLKG+PEEDV KAR+L  
Sbjct: 61  KEYYDDEWQTRQREKTKELHRRRQEEEEEEERKVEEYREIGMRLKGYPEEDVRKARRLVS 120

Query: 121 -----------KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEI 180
                      KIEEAAE+GELTELVL+VIWNRLDLARRD+EKDAIRSLDLLYRRVETEI
Sbjct: 121 SLIRSAEEVEEKIEEAAERGELTELVLMVIWNRLDLARRDNEKDAIRSLDLLYRRVETEI 180

Query: 181 LKREASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFSILVPAGFDIDKHQG 240
           LKREA+P MRLLNDLLN++D F+DE WLK+C+K M+DTFPREDPFSILVP GFDID+HQG
Sbjct: 181 LKREATPTMRLLNDLLNLHDGFDDEVWLKECKKLMVDTFPREDPFSILVPPGFDIDEHQG 240

Query: 241 QLRPSLDVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKHQEKQ 300
            LRP L  EAD+ LLRVDFVREVD LLQEV+A+Q E Q   A G D ESVAS+LK QEKQ
Sbjct: 241 PLRPPL--EADDALLRVDFVREVDALLQEVKAEQREAQ--AAQGLDPESVASKLKQQEKQ 300

Query: 301 RTVRLVETLLELAMNLEW 302
           RT+R VE LL+LA+NL+W
Sbjct: 301 RTIRQVEALLDLAINLKW 314

[Close]

BLAST of Cp4.1LG05g01720 vs. TrEMBL
Match: A0A0D2RVK8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G083400 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 2.2e-108
Identity = 219/316 (69.30%), Postives = 260/316 (82.28%), Query Frame = 1


Query: 1   MLAQVLWLRCS-PVPPL-PSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKE 60
           M A++  L CS P+ PL P+ +  L +  T+       S+ VLRR +++EE L++G+PKE
Sbjct: 1   MEAKLFLLTCSLPLQPLLPTCNMRLSRFKTTS-----PSKTVLRRCMNQEEQLLEGMPKE 60

Query: 61  YYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVIKARKL---- 120
           YYDDEWQARQREKTKELHRRR+EE+EEEERKVEEYREIGMRLKG+P+EDV++ARKL    
Sbjct: 61  YYDDEWQARQREKTKELHRRRREEEEEEERKVEEYREIGMRLKGYPQEDVVRARKLVSSF 120

Query: 121 ---------KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILK 180
                    KIEEAAE+GELTELVL+VIWNRLDLARRDDEKDAIRSLDLLYRRVETEILK
Sbjct: 121 ITAEEEVEEKIEEAAERGELTELVLMVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILK 180

Query: 181 REASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFSILVPAGFDIDKHQGQL 240
           REASPAMRLLNDLLNM+D F++EGWLK+C+KRM++TFPREDPFSILVPAGFDIDKH G L
Sbjct: 181 REASPAMRLLNDLLNMHDGFDNEGWLKECKKRMVETFPREDPFSILVPAGFDIDKHHGPL 240

Query: 241 RPSLDVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKHQEKQRT 300
             SL  EAD+ LLRVDF+REVD LLQEVR++Q+E Q    DG D ESVA +LK  E++RT
Sbjct: 241 --SLPAEADDVLLRVDFIREVDALLQEVRSEQNEAQ--TPDGLDPESVAVKLKEHERKRT 300

Query: 301 VRLVETLLELAMNLEW 302
           +R VETLL+LA+NL+W
Sbjct: 301 IRQVETLLDLAINLQW 307

[Close]

BLAST of Cp4.1LG05g01720 vs. TAIR10
Match: AT2G48120.1 (AT2G48120.1 pale cress protein (PAC))

HSP 1 Score: 372.9 bits (956), Expect = 1.9e-103
Identity = 201/315 (63.81%), Postives = 242/315 (76.83%), Query Frame = 1


Query: 1   MLAQVLWLRC-SPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEY 60
           M A  L L C SP+   P       KL+T   L + +++   R S + +E L++G+P EY
Sbjct: 1   MAATSLVLTCASPLFSSPRVISATKKLTTE--LSISTAKFRRRCSGNNDEVLLEGMPPEY 60

Query: 61  YDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVIKARKL----- 120
           YDDEWQARQREKTKEL R ++EE+EEEERK+EEYREIG RLK FPE+D+ KARKL     
Sbjct: 61  YDDEWQARQREKTKELRRMQREEEEEEERKIEEYREIGTRLKEFPEQDLRKARKLVSSFI 120

Query: 121 --------KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKR 180
                   +IEEAAEKGEL ELVL++IWNRLDLARRDDEKDAIRSLDLLYRRVETEILKR
Sbjct: 121 RAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKR 180

Query: 181 EASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFSILVPAGFDIDKHQGQLR 240
           +ASPAM+LLNDLLNM+D F D+ WLKDCRKRM +TFPREDPFSIL+P GFDID HQGQLR
Sbjct: 181 QASPAMKLLNDLLNMHDGFEDDAWLKDCRKRMAETFPREDPFSILMPPGFDIDMHQGQLR 240

Query: 241 PSLDVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKHQEKQRTV 300
           P ++ E DNTLLRVDFVREVD LLQEVR ++     +  +G D E++A + K QEKQRT+
Sbjct: 241 PPIETETDNTLLRVDFVREVDALLQEVRIEEDATTGSKGEGLDPEAIALKFKQQEKQRTI 300

Query: 301 RLVETLLELAMNLEW 302
           R +E +L+LA+NL+W
Sbjct: 301 RQIEAILDLALNLKW 313

[Close]

BLAST of Cp4.1LG05g01720 vs. NCBI nr
Match: gi|449444649|ref|XP_004140086.1| (PREDICTED: protein PALE CRESS, chloroplastic [Cucumis sativus])

HSP 1 Score: 465.7 bits (1197), Expect = 6.2e-128
Identity = 256/314 (81.53%), Postives = 271/314 (86.31%), Query Frame = 1


Query: 1   MLAQVLWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY 60
           M AQ+L LR S +PPL S +P LPKL TS      SS  VLRRSLSKEEPLIDGLPKEYY
Sbjct: 1   MEAQLLCLRFSSLPPLLSTTPILPKLWTSPSSHRCSSGLVLRRSLSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVIKARKL------ 120
           DDEWQARQREKTKELHRRRQEEDEEE+RKVEEYREIGMRLK FPEEDV KARKL      
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVEEYREIGMRLKEFPEEDVRKARKLVSSFIR 120

Query: 121 -------KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRE 180
                  KIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKRE
Sbjct: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180

Query: 181 ASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFSILVPAGFDIDKHQGQLRP 240
           A+PAMRLLN+LLNMYD F++EGWLK CRK M+DTFPREDPFSILVPAGFDIDKHQG LRP
Sbjct: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240

Query: 241 SLDVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKHQEKQRTVR 300
           SL VE+DNTLLRVDFVREVDELLQEV A QS+VQN NAD FDAESVASRLK QEKQRT+R
Sbjct: 241 SLAVESDNTLLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIR 300

Query: 301 LVETLLELAMNLEW 302
           LVE LL+LAMNL+W
Sbjct: 301 LVEALLDLAMNLKW 314

[Close]

BLAST of Cp4.1LG05g01720 vs. NCBI nr
Match: gi|659096986|ref|XP_008449384.1| (PREDICTED: protein PALE CRESS, chloroplastic [Cucumis melo])

HSP 1 Score: 463.0 bits (1190), Expect = 4.0e-127
Identity = 255/314 (81.21%), Postives = 269/314 (85.67%), Query Frame = 1


Query: 1   MLAQVLWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY 60
           M AQVL LR S +P L S +P L KL TS   K YSS  VLRRS SKEEPLIDGLPKEYY
Sbjct: 1   MEAQVLCLRFSSLPQLLSTTPILSKLWTSRSSKHYSSGLVLRRSFSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVIKARKL------ 120
           DDEWQARQREKTKELHRRRQEEDEEE+RKV+EY EIGMRLK FPEEDV KARKL      
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIR 120

Query: 121 -------KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRE 180
                  KIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKRE
Sbjct: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180

Query: 181 ASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFSILVPAGFDIDKHQGQLRP 240
           A+PAMRLLN+LLNMYD F++EGWLK CRK M+DTFPREDPFSILVPAGFDIDKHQG LRP
Sbjct: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240

Query: 241 SLDVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKHQEKQRTVR 300
           SL VEADNTLLRVDFVREVDELLQEV A QS+VQN NAD FDAESVASRLK QEKQRT+R
Sbjct: 241 SLTVEADNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIR 300

Query: 301 LVETLLELAMNLEW 302
           LVE LL+LAMNL+W
Sbjct: 301 LVEALLDLAMNLKW 314

[Close]

BLAST of Cp4.1LG05g01720 vs. NCBI nr
Match: gi|645258483|ref|XP_008234910.1| (PREDICTED: protein PALE CRESS, chloroplastic [Prunus mume])

HSP 1 Score: 418.3 bits (1074), Expect = 1.1e-113
Identity = 229/315 (72.70%), Postives = 263/315 (83.49%), Query Frame = 1


Query: 1   MLAQVLWLRCSPVPPLP-SASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEY 60
           M  +V  L C+ +P  P S+S +  +L  S F   ++ + VLR+S++KEEPL++GLPKEY
Sbjct: 1   METRVFPLTCTALPLSPASSSSSHGRLWPSPFKPKHAPKTVLRKSMNKEEPLLEGLPKEY 60

Query: 61  YDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVIKARKL----- 120
           YDDEWQARQREKTKELH+RRQEEDEEEERKVEEYREIGMRLKG+PEEDV KARKL     
Sbjct: 61  YDDEWQARQREKTKELHQRRQEEDEEEERKVEEYREIGMRLKGYPEEDVRKARKLISSFI 120

Query: 121 --------KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKR 180
                   KIEEAAEKGELTELVL+VIWNRLDLARRD+EKD IRSLDLLYRRVE EILKR
Sbjct: 121 RAAEEVEEKIEEAAEKGELTELVLMVIWNRLDLARRDEEKDVIRSLDLLYRRVEAEILKR 180

Query: 181 EASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFSILVPAGFDIDKHQGQLR 240
           EASPAMRLLNDLLNM+D ++ EGWLK+C+KRM+DTFPREDPFSILVP GFDIDKHQG LR
Sbjct: 181 EASPAMRLLNDLLNMHDGYDGEGWLKECKKRMVDTFPREDPFSILVPEGFDIDKHQGPLR 240

Query: 241 PSLDVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKHQEKQRTV 300
             L +EAD+ LLRVDFVREVD LLQEVRA+Q+EVQ  NA G DAES+ASRLK QEKQR +
Sbjct: 241 --LPLEADDVLLRVDFVREVDALLQEVRAEQNEVQ--NAQGLDAESIASRLKQQEKQRAI 300

Query: 301 RLVETLLELAMNLEW 302
           RLVE +L+LA+NL+W
Sbjct: 301 RLVEAILDLAINLKW 311

[Close]

BLAST of Cp4.1LG05g01720 vs. NCBI nr
Match: gi|657954824|ref|XP_008368863.1| (PREDICTED: protein PALE CRESS, chloroplastic-like [Malus domestica])

HSP 1 Score: 414.5 bits (1064), Expect = 1.6e-112
Identity = 230/316 (72.78%), Postives = 262/316 (82.91%), Query Frame = 1


Query: 1   MLAQVLWLRCS--PVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKE 60
           M A+V  L C+  P+ P PS+S +  +L +S     Y S  VLR+S+ KEEP+++GLPKE
Sbjct: 1   MEARVFPLTCAAPPLSPTPSSSSSHARLWSSQLKPKYVS--VLRKSVKKEEPVLEGLPKE 60

Query: 61  YYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVIKARKL---- 120
           YYDDEWQA+QREKTKEL+RRRQEEDEEEERKVEEYREIGMRLK +PEEDV  ARKL    
Sbjct: 61  YYDDEWQAQQREKTKELNRRRQEEDEEEERKVEEYREIGMRLKDYPEEDVRNARKLISSF 120

Query: 121 ---------KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILK 180
                    KIEEAAEKGELTELVL+VIWNRLDLARRDDEKD IRSLDLLYRRVE EILK
Sbjct: 121 IRAAEEVEEKIEEAAEKGELTELVLMVIWNRLDLARRDDEKDVIRSLDLLYRRVEAEILK 180

Query: 181 REASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFSILVPAGFDIDKHQGQL 240
           REA+PAMRLLNDLLNM+D F+ EGWLK+C+KRMIDTFPREDPFSILVPAGFDIDKH+G L
Sbjct: 181 REATPAMRLLNDLLNMHDGFDGEGWLKECKKRMIDTFPREDPFSILVPAGFDIDKHEGPL 240

Query: 241 RPSLDVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKHQEKQRT 300
           R  L VEAD+ LLRVDFVREVD LLQEVRA+QSEVQNA   G D E++ASRLK QEKQR 
Sbjct: 241 R--LPVEADDALLRVDFVREVDALLQEVRAEQSEVQNAQ--GLDPEAIASRLKQQEKQRA 300

Query: 301 VRLVETLLELAMNLEW 302
           +RLVE++L+LA+NL+W
Sbjct: 301 IRLVESILDLAINLQW 310

[Close]

BLAST of Cp4.1LG05g01720 vs. NCBI nr
Match: gi|359479800|ref|XP_002271766.2| (PREDICTED: protein PALE CRESS, chloroplastic isoform X1 [Vitis vinifera])

HSP 1 Score: 412.5 bits (1059), Expect = 6.2e-112
Identity = 227/319 (71.16%), Postives = 261/319 (81.82%), Query Frame = 1


Query: 1   MLAQVLWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRP-----VLRRSLSKEEPLIDGL 60
           M A+   L C+P+PP P  + T+ +++       ++S+P     VLRRS +KEE  + GL
Sbjct: 1   MEAKAFRLLCAPLPPSPQPTSTVGRITIPLKPSPFNSKPPSGAGVLRRSKNKEEQELYGL 60

Query: 61  PKEYYDDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVIKARKL- 120
           PKEYYDDEWQARQREKTKELHRRRQEE+EEEERKVEEYREIG+RLKG+PEE+V KA+KL 
Sbjct: 61  PKEYYDDEWQARQREKTKELHRRRQEEEEEEERKVEEYREIGLRLKGYPEEEVKKAKKLV 120

Query: 121 ------------KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETE 180
                       KIEEAAEKGELTELVL+VIWNRLDLARRDDEKDA+RSLDLLYRRVETE
Sbjct: 121 SSFIRSAEEVEEKIEEAAEKGELTELVLMVIWNRLDLARRDDEKDAVRSLDLLYRRVETE 180

Query: 181 ILKREASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFSILVPAGFDIDKHQ 240
           ILKREASPAMRLLNDLLNM+D F+DEGWLK C+K MIDTFPREDPFSILVPAGF+ID+HQ
Sbjct: 181 ILKREASPAMRLLNDLLNMHDGFDDEGWLKKCKKCMIDTFPREDPFSILVPAGFNIDEHQ 240

Query: 241 GQLRPSLDVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKHQEK 300
           G+LRP L+V  D+ LLRVDFVREVD LLQEVR +QSE QNA   G D ESVASRLK QEK
Sbjct: 241 GKLRPPLEV--DDPLLRVDFVREVDALLQEVRPEQSEAQNAQ--GLDPESVASRLKQQEK 300

Query: 301 QRTVRLVETLLELAMNLEW 302
           Q+T+R VE LL+LA+NL+W
Sbjct: 301 QQTIRQVEALLDLAINLKW 315

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g01720 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PAC_ARATH	3.4e-102	63.81	Protein PALE CRESS, chloroplastic OS=Arabidopsis thaliana GN=PAC PE=2 SV=1	[more]

BLAST of Cp4.1LG05g01720 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJC6_CUCSA	4.3e-128	81.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G408790 PE=4 SV=1	[more]
D7TPC4_VITVI	4.3e-112	71.16	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0104g00380 PE=4 SV=...	[more]
M5VXJ3_PRUPE	1.5e-109	71.43	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009042mg PE=4 SV=1	[more]
W9QKP8_9ROSA	4.5e-109	70.75	Uncharacterized protein OS=Morus notabilis GN=L484_025030 PE=4 SV=1	[more]
A0A0D2RVK8_GOSRA	2.2e-108	69.30	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G083400 PE=4 SV=1	[more]

BLAST of Cp4.1LG05g01720 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G48120.1	1.9e-103	63.81	pale cress protein (PAC)	[more]

BLAST of Cp4.1LG05g01720 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449444649\|ref\|XP_004140086.1\|	6.2e-128	81.53	PREDICTED: protein PALE CRESS, chloroplastic [Cucumis sativus]	[more]
gi\|659096986\|ref\|XP_008449384.1\|	4.0e-127	81.21	PREDICTED: protein PALE CRESS, chloroplastic [Cucumis melo]	[more]
gi\|645258483\|ref\|XP_008234910.1\|	1.1e-113	72.70	PREDICTED: protein PALE CRESS, chloroplastic [Prunus mume]	[more]
gi\|657954824\|ref\|XP_008368863.1\|	1.6e-112	72.78	PREDICTED: protein PALE CRESS, chloroplastic-like [Malus domestica]	[more]
gi\|359479800\|ref\|XP_002271766.2\|	6.2e-112	71.16	PREDICTED: protein PALE CRESS, chloroplastic isoform X1 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010239	chloroplast mRNA processing
biological_process	GO:0048366	leaf development
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0071482	cellular response to light stimulus
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0009501	amyloplast
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009509	chromoplast
cellular_component	GO:0009513	etioplast
cellular_component	GO:0009537	proplastid
cellular_component	GO:0042644	chloroplast nucleoid
cellular_component	GO:0009536	plastid
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g01720.1	Cp4.1LG05g01720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 246..266 scor
None	No IPR available	PANTHER	PTHR37219	FAMILY NOT NAMED	coord: 12..301 score: 4.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG05g01720	CmaCh02G018100	Cucurbita maxima (Rimu)	cmacpeB647
Cp4.1LG05g01720	CmoCh02G018560	Cucurbita moschata (Rifu)	cmocpeB596
Cp4.1LG05g01720	Cla006075	Watermelon (97103) v1	cpewmB698
Cp4.1LG05g01720	Csa6G408790	Cucumber (Chinese Long) v2	cpecuB748
Cp4.1LG05g01720	ClCG07G000070	Watermelon (Charleston Gray)	cpewcgB687
Cp4.1LG05g01720	CSPI06G21820	Wild cucumber (PI 183967)	cpecpiB751
Cp4.1LG05g01720	Lsi05G009060	Bottle gourd (USVL1VR-Ls)	cpelsiB625
Cp4.1LG05g01720	CsaV3_6G036870	Cucumber (Chinese Long) v3	cpecucB0929
Cp4.1LG05g01720	Bhi05G000269	Wax gourd	cpewgoB0935
Cp4.1LG05g01720	CsGy6G021090	Cucumber (Gy14) v2	cgybcpeB851
Cp4.1LG05g01720	Carg26559	Silver-seed gourd	carcpeB1305

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG05g01720	Wax gourd	cpewgoB0936
Cp4.1LG05g01720	Cucurbita pepo (Zucchini)	cpecpeB273
Cp4.1LG05g01720	Cucumber (Gy14) v1	cgycpeB0514
Cp4.1LG05g01720	Cucurbita maxima (Rimu)	cmacpeB543
Cp4.1LG05g01720	Cucurbita moschata (Rifu)	cmocpeB498
Cp4.1LG05g01720	Bottle gourd (USVL1VR-Ls)	cpelsiB616
Cp4.1LG05g01720	Watermelon (Charleston Gray)	cpewcgB683
Cp4.1LG05g01720	Watermelon (97103) v1	cpewmB700
Cp4.1LG05g01720	Melon (DHL92) v3.5.1	cpemeB695
Cp4.1LG05g01720	Melon (DHL92) v3.6.1	cpemedB828
Cp4.1LG05g01720	Silver-seed gourd	carcpeB1062