Carg26559 (gene) Silver-seed gourd

Overview
NameCarg26559
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionprotein PALE CRESS, chloroplastic
LocationCucurbita_argyrosperma_scaffold_440 : 74250 .. 80614 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAAAAAAAAAAAAAATTAAATCGAGGGTCTCAGCCCCTTGGCCTTTAAATCCGTCCGTGCAAGCATCCAAGTCCTTTCCCAGCTTGCTGGTTGTTTCGGAGCTATAATGTTGGCACAGGTGCGTTGGCTGAGATGCTCACCAGTTCCACCATTACCCTCTGCTTCCCCAACCTTACCGAAGCTTTCGACCTCCTATTTCTTAAAGCTTTATTCATCTCGTCCTGGTTAGCTCTCTTGCAGCTTGTTTATTCACTCTTCAGATACTGAATTTATCGTAACTTCTCATTTTGGTGGTTTTGGTGATTTTGATGGTCAGTTTTAAGGAGGAGCTTGAGCAAGGAAGAGCCGCTTATTGATGGGCTTCCCAAAGAGTATTACGATGATGTACGTGGATATTTGAATTTAACTACTCCCTAATTTGCATTTTCCGTTGATTGAGCTTCTACTTCTTCATCTATTTCTTCTTGTTTGCTCTTTATTTGTTTTTTTTTTTTTTTTTTTTTTTTCCTTCTTCTCTCTGGTGGTTTGGGAAAGGGTTAACACTTGACAGAGATGAAAATGATTGATTTTCCGAGTGACACATGCCTGTTATATAGAACCTGCTGAAGCTGAAACACTTTCGAACATAAATAAAAGACAATTCTGTACTTGGGCGATTTTAGGGGAAGTTTCCTGTTCGCCAAAATGTTTTGGAAAAACTTATTTATTTTTACACACCAAATCCTCACTCTAATTATTTCGTCATCTTCCTTTCTGGCTGACCAAAAACTTGCGACCATGGTTAAACGTCGTAAAAGAACTTGTGTTTCCTATTTTACTAATTATACTGATGTGGCCCAAAATTCGTGATCATGAGAGCGAGGGAGGGGGGAAAAGAAAAGAGGAAGAACAATGAAGCAGGGGAAATGAGAGGGAAAGACAGCACGAATGAAAGTATAGGAAAATAAGTTGAAAGGTTATTTTACAAAGCTGATAGATGCAAATTTTGTTCGATCTCTTTAATGTTGAGGGTGGATAGATTTCTTCGAGGTAGTAGAAGCGTAGTGGTAGCCACCAGAGAGAATCAATGCATTTTTCTTTTAACTGACCATCAGAAAGAAAATATATTGGTCAAAGAAATAGAGTGAGCATTTTGGTTCAAAGAAACTAATTATATATATTTATATTTCCTGAGCTATTGATGAATGGGTCAGGAAAAAAGAAACAGGGGTGGCTACTAAATTGGATATTGAAAAGGCCTTTTGGTAAGATGGATTAGGATTTCCTCGAAGAGAATCATTGTCAAAAAAGGGTTTGAGAACAAGGGGATACGATAGATGCGGGTGTATATTCCCCACAACATTTTCCATTATAAATGGCAAGCCAAGAGGCAAATTTGATGCATTTAGAGGTCCATGCCAAAGAGACCGCCCTCGATTATTGATCAATGCAACATTGGACCCGACAAAGTAAACCATACTAAAATATTACTCCCTTCCTCTTTAGTCAACTTTGCATCAGAAGAAATGCTTCCCAACTGTGTTATAGAATTAGACAATGAATCATTTTTGAGTTTAAGTAGCTTGAAAATTGACTGTCAGCCAGTCTGCAAGTATAATGATGATGCCATTGCTGAAGACTCATTGTTTTGAAGGTCTAGTCTCTCTTTTTCAGACACCTGGTAATCTGAATGTTTCTGAAATTATTGTGCCAGTAGGAAAACAGGCTTTAGACAATGATTTTCTATCTGCATCACATTCCGGTTTGCACAATTTTTCTTCTATGATTAAGGCTAGTAGTGTACAATTCCGTGAAATTATTCCCTCTTTTCCAAAGGCGACCAGTCAGAAAATTAATTTAAGTGTGAATCCCTCTTTGATATGCTATAAACATTTTTTCTTGGAACACCAGGGTCTGGGAAATGGATCCAACGAAGGAGTCTGAAGAATTTTTGTGAAGCATTTGCTCCGATAGTGTTGACTCAAGATTTCAATTTGTCATCAGTAGCTCAAAAGATTGTAGAATCTTTATGTAAAATCTTTATGGGGTTCAAAAGGTATTAATTGGGTTCAGGTGGAATCCTCGGGATGTTTGGGAGGTTTGCTAGTTTTGTGGATTGAAAGCAAGGTGAGCTTGGAATTGGATCGATTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAAAAGCAAAGAGGGTGGAAAGGTATCATTTTGAGCTTTAGTCTTTTTCATTTTTTAATAATTTTTTTTTTTTTTTTTTTCTTGTTAAAAAAGAAAAAAAAAAAAAAATAGTACATAGTGTTATAACATATATGATATTATGCATAGTTGTCTTTTATTGTAGTATATAGGTTCAACGAGCTCAACAAGAGAAGATGAATGTCACGAGCTTTCTTAATGGACATTCGTATGAATTTGGGATCACTAAATCACAAATTCTCTGCCTCTGAGACCCCTTATTTGGACGAAACCTTTATTAGAGTCCTTCGTACGTAAAATCCTCCATCTGGTTCATCTAGTTCTCAAGTTTAACAATACTCTAATTAGTCGGAATGATTCTAAGGTTGCTTAGGGGATGAGCATCAATACTCAGAGACTTGGTTCCGATAATCAGCGACAAGATTTTTGTAGGAGATTGTATGTAACAACTGTCGTAAGTTTGGTCATATGAAACATGACTATCGGAAGTTCTTGAATAAGGGTCAAAGACCTCAAGTTGCTCACGTTGCCTCCACCAATGATATATCTGAGAGATCGGTTACTATTTCTTTTGATGGTTTTGCCAAATTCCAATTGCATCAGAAATAATATAATCGCATGCACCATTGAATCCTATTGCAACCCTTCCAATGTCTTCTTACATCCTCTATTAAACGGGTCATAGACTCCGGTGCCACGACCCATATGACATACAATTCTAGCTTATTTCCTACTTCTTTGTCACATGCACCTTCTCTGGCTGTCACTTTCGCATATAAATCAACATCCTTTATTCTTGGATATGACGTCATTAATTCCACACCCTCTATCCCTTTAGCTTCTGTTTTACATTTGCTTCGACGCTTTTTAACTTGATTTCTTTTTGTGAACTCACTTGTGACCTTAATTGTTTTGTCTATTTTTTCTCTGGCTATTACTTGTTTGGGGATCATATGACGAAGAAGATTATTGGTACATGATATGAATTTGGAGGTCCATTCATTTTTTTATCACTAGAAACTGAATGTTCTCGCCTCCTCTGGCACTGCATCCTCGTTTGATGTTCATTAACGTTCTTTTTGTTACATTTTTTCATTGTGGGCTTTATAAAGCTTTTTGTAGTTACTTTATTGATGATGTTTTGGCTAAATAGAAGGCTTTCTTGTAACCTTATTTAACTTCGGAGTTGGCCTCCTCTTCTTTTGCATTTTTCGTTAATCGTGTTTTTTTATTAAAAAAAGGAAAATGTTTAAAAAAATCAGATATTAACCTGTTCTACAATAGGAATGGCAAGCCCGACAAAGAGAGAAGACAAAGGAGTTACATCGAAGGCGTCAAGAGGAAGATGAAGAAGAGGAAAGAAAGGTAGAAGAATATCGTGAGATTGGGATGCGTCTGAAAGGATTTCCCGAAGAAGATGTCATAAAAGCTAGAAAACTGGTTTCTAGCTTTATTAGAGCTGTTGAAGAAGTTGAAGAGGTAATCAACTATTGTGTTAATGTATTGATATAACTCATTAGCTTAAATTTTTGGATTGATTGGTAATTCAACATGCTATCGAAGTAGAAGGTCCTGTGTTCGAACTCTTGTAATATAATTTCCTCTCGAGTTAGTATTGATTCCCATTTGTTAGGTCTTCTTTAAATTTTGAAGTCCACAAGTGAAAAGGAATAGTATTGATATTAGATTAAATTTATCATAACCCATTAGCTTAAGTTTTTAAGTTTTGGGTTGATTGATGTAACATTATGCTACTATTAATCATTAACTTGATCTTTCAAAAAGTAGGGTGTTGTCTTCGAATCAGCATGAAGTTTTCTTGTTCTTGATTTTGGCGAAGTTTTTATGACAATACACTAAAAGATAGCTTAAGCAAACACAAACCATGAGTTCTCAACTAAACAAGTAGAGTTTGCTTACTAGAGCCTGCACAGTGACTTGGCTATGGTTTGCGAATGAAGGATATTTAGGGGTTTTTATTAGTATATTCTTCTTAGGTATGATTATAGTGTTCTATTCATGGGTAGTATTGATGGTGATTTTTCTTTGAATTTGTTTAATTTCGTACCATTTTTCACATAAAGCTTCTGACTATTAAATTATTGCAGAACTGGCTTATTGACTTTCTGATACTATATTTTATCAATTGGAATGCAGAAAATTGAGGAAGCTGCTGAGAAAGGGGAACTAACAGAGCTTGTTCTATTAGTCATATGGAATCGACTTGATTTAGCACGTCGTGATGTATATTAGTCTTCAAATTCCTTTAATTTTAATTCACTTTGTATATTTTGTAGGTTGCCTAGTTGTATGTGCTTACTTGTAATTGGCTCTTTCTTCAGGATGAAAAGGATGCAATTAGAAGTCTTGATCTGCTATATCGAAGGGTTGAGGTATGAACATGTTCAAAACTGTTTTAAATATGCCATATTGATTACGAGCTTAGAGAACACTCATTCAAATCCACACACCTACATGCAAGTTTTGCAATTGTAGGTCAAGGAAAAGGTTCTTAACTTATCCCCAAGGATCATTCTTAAATTTATCTATCTATAGCAGTTGTAATAGGGTCTTGTGCTCGTGATTTACTGAAACATTTTTTTGCTAATCTTTTAGGTGTTTTTATCACTCCGTCCATTTTTTTTACACAATCCATTTTAGATCCTGTCTTACCAGTGAAATGGTTTTTAGTTACAGGTTGTAACTTGCGGCACTTTTCTATTCAAGTCATCTCACTAATCTTTACACCAGCATTACTTTTTTCTTTTCCTTCAATTTTATTCTGGAAAAAGCAAGAATGTGTATTCTCCTAGTAATTCATGTTCTAAGTTTCCTCAATATTTTAGACTGAAATTCTCAAACGAGAGGCTAGTCCTGCCATGAGACTTCTCAACGATCTTCTGAATATGTATGACAACTTTAACGATGAAGGATGGCTAAAAGACTGCAGAAAACGCATGATTGATACCTTCCCGCGGGAGGATCCATTTAGCATTCTCGTTCCCGCTGGATTCGACATCGATAAGGTATACTTGTGTAAATATGATAGCTCAATTGGTTTCCAACGAGATGTAGATGATAAAATTTAAGGAATGTCTAAACTGAGTCTGCTTTTATTATATCTTCTCTTAATGATTAGCATCAAGGGCAGTTACGGCCATCACTTGAAGTTGAAGCTGATAATACACTGTTGAGAGTAGACTTCGTCAGAGAGGTTGATGAATTGCTACAAGAAGTCAGGGCGGATCAGAGTGAAGTGCAAAATGCAAATGCAGATGGTTTTGACGCGGAATCGGTGGCAAGCAGGTTGAAACAACAGGAGAAACAACGGACGGTAAGGTTGGTAGAAACGCTGCTAGAGTTGGCTATGAATTTAGAGTGGTAGGGTAGGCATAGGAATGAAATGGGCGTAGGATTTTAGTGGAAAAGAGAAGAATTTTAGGTTGCCCCAATATATTCAAGTATCCACGTCCACGTTTGGTTTTTAAGAAAGTTTCTAATAAACCTAGTCGAACTTTAACCATATCGTTGTCTTAAAATGAATTGACGTTGAAACAGGAACACAAAATTTAAATTTATATTGAAACAACCTGGTTCTGGTGTAGATATTAATACAAGTAGCCCTGATTTGTGATGATTATTTTCAAGCAATAAGGCACGTGTATTTGAGAAGAGAAAATTAGCGGAGGATGGGTTGGAAAGCCCCAACTCACTGGGCATTGTAATGAAATGAGAAAAAAGAATATAAATGGCAAAACTCCAAGCTACTCTAATTTAAAAAGATAAAGAAAAGTGATTGTGATTAGAATACTCGTAATCGCTGGTGTTGGAAACAGAATTGTAAGTTGCAAGGGAGACCACTGAGCGTCGTACCAAAACCAAACAGCCAACACCATGCTTCCTCGAGTCTGCCTGTCTTCACCCTTACTGCATATACCTTAGCCCCCCTCCTATTTTCTACATCAATTTCTAACTTTTTTTGATCGGCTTCTCCGCTTTGCTTTGGCCTACCAACTGCCCAAATGCAAATCCCATTCTAATCTGTGGTGTGGACGCGGACCTCTCCGCGACCATCTACTATCTCCTCCCCCGTGGAGCTCGCGCTTTCATCTGTCACCGTCCGGTCTTCAAACCCAATCTCACGAACTTCTCTGTGACACTCCGCCGCCGCCTCCTCT

mRNA sequence

AAAAAAAAAAAAAAAAAAAAATTAAATCGAGGGTCTCAGCCCCTTGGCCTTTAAATCCGTCCGTGCAAGCATCCAAGTCCTTTCCCAGCTTGCTGGTTGTTTCGGAGCTATAATGTTGGCACAGGTGCGTTGGCTGAGATGCTCACCAGTTCCACCATTACCCTCTGCTTCCCCAACCTTACCGAAGCTTTCGACCTCCTATTTCTTAAAGCTTTATTCATCTCGTCCTGTTTTAAGGAGGAGCTTGAGCAAGGAAGAGCCGCTTATTGATGGGCTTCCCAAAGAGTATTACGATGATGTGGAATCCTCGGGATGTTTGGGAGGTTTGCTAGTTTTGTGGATTGAAAGCAAGGAATGGCAAGCCCGACAAAGAGAGAAGACAAAGGAGTTACATCGAAGGCGTCAAGAGGAAGATGAAGAAGAGGAAAGAAAGGTAGAAGAATATCGTGAGATTGGGATGCGTCTGAAAGGATTTCCCGAAGAAGATGTCATAAAAGCTAGAAAACTGAAAATTGAGGAAGCTGCTGAGAAAGGGGAACTAACAGAGCTTGTTCTATTAGTCATATGGAATCGACTTGATTTAGCACGTCGTGATGATGAAAAGGATGCAATTAGAAGTCTTGATCTGCTATATCGAAGGGTTGAGACTGAAATTCTCAAACGAGAGGCTAGTCCTGCCATGAGACTTCTCAACGATCTTCTGAATATGTATGACAACTTTAACGATGAAGGATGGCTAAAAGACTGCAGAAAACGCATGATTGATACCTTCCCGCGGGAGGATCCATTTAGCATTCTCGTTCCCGCTGGATTCGACATCGATAAGCATCAAGGGCAGTTACGGCCATCACTTGAAGTTGAAGCTGATAATACACTGTTGAGAGTAGACTTCGTCAGAGAGGTTGATGAATTGCTACAAGAAGTCAGGGCGGATCAGAGTGAAGTGCAAAATGCAAATGCAGATGGTTTTGACGCGGAATCGGTGGCAAGCAGGTTGAAACAACAGGAGAAACAACGGACGGTAAGGTTGGTAGAAACGCTGCTAGAGTTGGCTATGAATTTAGAGTGGTAGGGTAGGCATAGGAATGAAATGGGCGTAGGATTTTAGTGGAAAAGAGAAGAATTTTAGGTTGCCCCAATATATTCAAGTATCCACGTCCACGTTTGGTTTTTAAGAAAGTTTCTAATAAACCTAGTCGAACTTTAACCATATCGTTGTCTTAAAATGAATTGACGTTGAAACAGGAACACAAAATTTAAATTTATATTGAAACAACCTGGTTCTGGTGTAGATATTAATACAAGTAGCCCTGATTTGTGATGATTATTTTCAAGCAATAAGGCACGTGTATTTGAGAAGAGAAAATTAGCGGAGGATGGGTTGGAAAGCCCCAACTCACTGGGCATTGTAATGAAATGAGAAAAAAGAATATAAATGGCAAAACTCCAAGCTACTCTAATTTAAAAAGATAAAGAAAAGTGATTGTGATTAGAATACTCGTAATCGCTGGTGTTGGAAACAGAATTGTAAGTTGCAAGGGAGACCACTGAGCGTCGTACCAAAACCAAACAGCCAACACCATGCTTCCTCGAGTCTGCCTGTCTTCACCCTTACTGCATATACCTTAGCCCCCCTCCTATTTTCTACATCAATTTCTAACTTTTTTTGATCGGCTTCTCCGCTTTGCTTTGGCCTACCAACTGCCCAAATGCAAATCCCATTCTAATCTGTGGTGTGGACGCGGACCTCTCCGCGACCATCTACTATCTCCTCCCCCGTGGAGCTCGCGCTTTCATCTGTCACCGTCCGGTCTTCAAACCCAATCTCACGAACTTCTCTGTGACACTCCGCCGCCGCCTCCTCT

Coding sequence (CDS)

ATGTTGGCACAGGTGCGTTGGCTGAGATGCTCACCAGTTCCACCATTACCCTCTGCTTCCCCAACCTTACCGAAGCTTTCGACCTCCTATTTCTTAAAGCTTTATTCATCTCGTCCTGTTTTAAGGAGGAGCTTGAGCAAGGAAGAGCCGCTTATTGATGGGCTTCCCAAAGAGTATTACGATGATGTGGAATCCTCGGGATGTTTGGGAGGTTTGCTAGTTTTGTGGATTGAAAGCAAGGAATGGCAAGCCCGACAAAGAGAGAAGACAAAGGAGTTACATCGAAGGCGTCAAGAGGAAGATGAAGAAGAGGAAAGAAAGGTAGAAGAATATCGTGAGATTGGGATGCGTCTGAAAGGATTTCCCGAAGAAGATGTCATAAAAGCTAGAAAACTGAAAATTGAGGAAGCTGCTGAGAAAGGGGAACTAACAGAGCTTGTTCTATTAGTCATATGGAATCGACTTGATTTAGCACGTCGTGATGATGAAAAGGATGCAATTAGAAGTCTTGATCTGCTATATCGAAGGGTTGAGACTGAAATTCTCAAACGAGAGGCTAGTCCTGCCATGAGACTTCTCAACGATCTTCTGAATATGTATGACAACTTTAACGATGAAGGATGGCTAAAAGACTGCAGAAAACGCATGATTGATACCTTCCCGCGGGAGGATCCATTTAGCATTCTCGTTCCCGCTGGATTCGACATCGATAAGCATCAAGGGCAGTTACGGCCATCACTTGAAGTTGAAGCTGATAATACACTGTTGAGAGTAGACTTCGTCAGAGAGGTTGATGAATTGCTACAAGAAGTCAGGGCGGATCAGAGTGAAGTGCAAAATGCAAATGCAGATGGTTTTGACGCGGAATCGGTGGCAAGCAGGTTGAAACAACAGGAGAAACAACGGACGGTAAGGTTGGTAGAAACGCTGCTAGAGTTGGCTATGAATTTAGAGTGGTAG

Protein sequence

MLAQVRWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYYDDVESSGCLGGLLVLWIESKEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVIKARKLKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFSILVPAGFDIDKHQGQLRPSLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKQQEKQRTVRLVETLLELAMNLEW
Homology
[Close]
BLAST of Carg26559 vs. NCBI nr
Match: XP_022931090.1 (protein PALE CRESS, chloroplastic [Cucurbita moschata])

HSP 1 Score: 490.3 bits (1261), Expect = 4.8e-135
Identity = 284/332 (85.54%), Postives = 284/332 (85.54%), Query Frame = 0 

Query: 1   MLAQVRWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY 60
           MLAQVRWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY
Sbjct: 1   MLAQVRWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY 60

Query: 61  DDVESSGCLGGLLVLWIESKEWQARQREKTKEXXXXXXXXXXXXXXXXEEYREIGMRLKG 120
           DD                  EWQARQREK   XXXXXXXXXXXXXXXXEEYREIGMRLKG
Sbjct: 61  DD------------------EWQARQREKXXXXXXXXXXXXXXXXXXXEEYREIGMRLKG 120

Query: 121 FPEEDVIKARKL--KIEEAAE-----------KGELTELVLLVIWNRLDLARRDDEKDAI 180
           FPEEDVIKARKL      A E                   LLVIWNRLDLARRDDEKDAI
Sbjct: 121 FPEEDVIKARKLVSSFIRAVEXXXXXXXXXXXXXXXXXXXLLVIWNRLDLARRDDEKDAI 180

Query: 181 RSLDLLYRRVETEILKREASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFS 240
           RSLDLLYRRVETEILKREASPAMRLLNDLLNMYDNFNDEGWLKDCRK MIDTFPREDPFS
Sbjct: 181 RSLDLLYRRVETEILKREASPAMRLLNDLLNMYDNFNDEGWLKDCRKCMIDTFPREDPFS 240

Query: 241 ILVPAGFDIDKHQGQLRPSLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFD 300
           ILVPAGFDIDKHQGQLRPSLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFD
Sbjct: 241 ILVPAGFDIDKHQGQLRPSLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFD 300

Query: 301 AESVASRLKQQEKQRTVRLVETLLELAMNLEW 320
           AESVASRLKQQEKQRTVRLVETLLELAMNLEW
Sbjct: 301 AESVASRLKQQEKQRTVRLVETLLELAMNLEW 314

[Close]
BLAST of Carg26559 vs. NCBI nr
Match: XP_023534033.1 (protein PALE CRESS, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 487.6 bits (1254), Expect = 3.1e-134
Identity = 282/332 (84.94%), Postives = 283/332 (85.24%), Query Frame = 0 

Query: 1   MLAQVRWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY 60
           MLAQV WLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY
Sbjct: 1   MLAQVLWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY 60

Query: 61  DDVESSGCLGGLLVLWIESKEWQARQREKTKEXXXXXXXXXXXXXXXXEEYREIGMRLKG 120
           DD                  EWQARQREK   XXXXXXXXXXXXXXXXEEYREIGMRLKG
Sbjct: 61  DD------------------EWQARQREKXXXXXXXXXXXXXXXXXXXEEYREIGMRLKG 120

Query: 121 FPEEDVIKARKL--KIEEAAE-----------KGELTELVLLVIWNRLDLARRDDEKDAI 180
           FPEEDVIKARKL      A E                   LLVIWNRLDLARRDDEKDAI
Sbjct: 121 FPEEDVIKARKLVSSFIRAVEXXXXXXXXXXXXXXXXXXXLLVIWNRLDLARRDDEKDAI 180

Query: 181 RSLDLLYRRVETEILKREASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFS 240
           RSLDLLYRRVETEILKREASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFS
Sbjct: 181 RSLDLLYRRVETEILKREASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFS 240

Query: 241 ILVPAGFDIDKHQGQLRPSLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFD 300
           ILVPAGFDIDKHQGQLRPSL+VEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFD
Sbjct: 241 ILVPAGFDIDKHQGQLRPSLDVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFD 300

Query: 301 AESVASRLKQQEKQRTVRLVETLLELAMNLEW 320
           AESVASRLK QEKQRTVRLVETLLELAMNLEW
Sbjct: 301 AESVASRLKHQEKQRTVRLVETLLELAMNLEW 314

[Close]
BLAST of Carg26559 vs. NCBI nr
Match: XP_022995861.1 (protein PALE CRESS, chloroplastic [Cucurbita maxima])

HSP 1 Score: 481.9 bits (1239), Expect = 1.7e-132
Identity = 278/332 (83.73%), Postives = 279/332 (84.04%), Query Frame = 0 

Query: 1   MLAQVRWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY 60
           MLAQV WLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY
Sbjct: 1   MLAQVLWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY 60

Query: 61  DDVESSGCLGGLLVLWIESKEWQARQREKTKEXXXXXXXXXXXXXXXXEEYREIGMRLKG 120
           DD                  EWQARQREKT  XXXXXXXXXXXXXXXX EYREIGMRLKG
Sbjct: 61  DD------------------EWQARQREKTXXXXXXXXXXXXXXXXXXXEYREIGMRLKG 120

Query: 121 FPEEDVIKARKL-------------KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAI 180
           FPEEDV KARKL                             LVIWNRLDLARRDDEKDAI
Sbjct: 121 FPEEDVRKARKLVSSFIRAVXXXXXXXXXXXXXXXXXXXXXLVIWNRLDLARRDDEKDAI 180

Query: 181 RSLDLLYRRVETEILKREASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFS 240
           RSLDLLYRRVETEILKREASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFS
Sbjct: 181 RSLDLLYRRVETEILKREASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFS 240

Query: 241 ILVPAGFDIDKHQGQLRPSLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFD 300
           ILVPAGFDIDKHQGQLRPSLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFD
Sbjct: 241 ILVPAGFDIDKHQGQLRPSLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFD 300

Query: 301 AESVASRLKQQEKQRTVRLVETLLELAMNLEW 320
           AESVASRLK QEKQR+VRLVETLLELAMNLEW
Sbjct: 301 AESVASRLKHQEKQRSVRLVETLLELAMNLEW 314

[Close]
BLAST of Carg26559 vs. NCBI nr
Match: XP_022159473.1 (protein PALE CRESS, chloroplastic [Momordica charantia])

HSP 1 Score: 455.7 bits (1171), Expect = 1.3e-124
Identity = 265/332 (79.82%), Postives = 278/332 (83.73%), Query Frame = 0 

Query: 1   MLAQVRWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY 60
           M A V WLRC PVPPLPSAS TL KLSTS+F K +S   VLR SLSKEEPLIDGLPKE+Y
Sbjct: 1   MEANVLWLRCPPVPPLPSASSTLQKLSTSHFSKRHSPGFVLRSSLSKEEPLIDGLPKEFY 60

Query: 61  DDVESSGCLGGLLVLWIESKEWQARQREKTKEXXXXXXXXXXXXXXXXEEYREIGMRLKG 120
           DD                  EWQARQREKTKEXXXXXXXXXXXXXXXXEEYREIGMRLKG
Sbjct: 61  DD------------------EWQARQREKTKEXXXXXXXXXXXXXXXXEEYREIGMRLKG 120

Query: 121 FPEEDVIKARKL-------------KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAI 180
           FPEEDVIKARKL             KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAI
Sbjct: 121 FPEEDVIKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAI 180

Query: 181 RSLDLLYRRVETEILKREASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFS 240
           RSLDLLYRRVETEILKREA+PAMRLLN+LLNMYD F+DEGWLKDCRKRM+DTFPREDPFS
Sbjct: 181 RSLDLLYRRVETEILKREATPAMRLLNELLNMYDGFDDEGWLKDCRKRMVDTFPREDPFS 240

Query: 241 ILVPAGFDIDKHQGQLRPSLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFD 300
           ILVP G DIDKHQG LRPSL  EADNTLLRVDFVREVDELLQEVR D+SEVQ ANA GFD
Sbjct: 241 ILVPVGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLQEVRPDESEVQYANAGGFD 300

Query: 301 AESVASRLKQQEKQRTVRLVETLLELAMNLEW 320
            ESVASRLKQQEKQRT+RLVE LL+L++NL+W
Sbjct: 301 VESVASRLKQQEKQRTIRLVEALLDLSINLKW 312

[Close]
BLAST of Carg26559 vs. NCBI nr
Match: XP_018847433.1 (PREDICTED: protein PALE CRESS, chloroplastic [Juglans regia])

HSP 1 Score: 375.6 bits (963), Expect = 1.7e-100
Identity = 228/336 (67.86%), Postives = 257/336 (76.49%), Query Frame = 0 

Query: 1   MLAQVRWLRCSPVPPLPSASPTLPKLST----SYFLKLYSSRPVLRRSLSKEEPLIDGLP 60
           M A+V  L C   P LP+ S  L KL        F   YSS  VLRRS+SK+EPLIDGLP
Sbjct: 1   MEAKVLKLTCLLPPTLPTHSAVLAKLPVLPFPYPFKPKYSSLSVLRRSVSKDEPLIDGLP 60

Query: 61  KEYYDDVESSGCLGGLLVLWIESKEWQARQREKTKEXXXXXXXXXXXXXXXXEEYREIGM 120
           KEYYDD                  EWQARQ+ KTKE XXXXXXXXXXXXXX +EYREI M
Sbjct: 61  KEYYDD------------------EWQARQQGKTKELXXXXXXXXXXXXXXVQEYREIAM 120

Query: 121 RLKGFPEEDVIKARKL-------------KIEEAAEKGELTELVLLVIWNRLDLARRDDE 180
           RL+G+PE+DV KAR+L             KIEEAAE+GELTELVL+VIWNRLDLARRD+E
Sbjct: 121 RLQGYPEQDVKKARRLVSSFIIAAEEVEEKIEEAAERGELTELVLMVIWNRLDLARRDEE 180

Query: 181 KDAIRSLDLLYRRVETEILKREASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPRE 240
           KDAIRSLDLLYRRVETEILKREA+PAMRLLNDLL+++D F DEGWLK+C+K M+DTFPRE
Sbjct: 181 KDAIRSLDLLYRRVETEILKREATPAMRLLNDLLSIHDEFGDEGWLKECKKLMVDTFPRE 240

Query: 241 DPFSILVPAGFDIDKHQGQLRPSLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNANA 300
           DPFSILVPAGFDIDKHQG +RP L  E D+TLLRVDFVREVD LLQEVR + SE Q  NA
Sbjct: 241 DPFSILVPAGFDIDKHQGPIRPPL--EDDDTLLRVDFVREVDTLLQEVRCELSEAQ--NA 300

Query: 301 DGFDAESVASRLKQQEKQRTVRLVETLLELAMNLEW 320
            GFD ESVASRLKQQEK++T+R VE LL+LA+NL+W
Sbjct: 301 QGFDPESVASRLKQQEKKQTIRQVEALLDLAINLKW 314

[Close]
BLAST of Carg26559 vs. TAIR10
Match: AT2G48120.1 (pale cress protein (PAC))

HSP 1 Score: 315.1 bits (806), Expect = 5.0e-86
Identity = 158/224 (70.54%), Postives = 183/224 (81.70%), Query Frame = 0 

Query: 109 EEYREIGMRLKGFPEEDVIKARKL-------------KIEEAAEKGELTELVLLVIWNRL 168
           EEYREIG RLK FPE+D+ KARKL             +IEEAAEKGEL ELVL++IWNRL
Sbjct: 90  EEYREIGTRLKEFPEQDLRKARKLVSSFIRAAEEVEERIEEAAEKGELDELVLMIIWNRL 149

Query: 169 DLARRDDEKDAIRSLDLLYRRVETEILKREASPAMRLLNDLLNMYDNFNDEGWLKDCRKR 228
           DLARRDDEKDAIRSLDLLYRRVETEILKR+ASPAM+LLNDLLNM+D F D+ WLKDCRKR
Sbjct: 150 DLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFEDDAWLKDCRKR 209

Query: 229 MIDTFPREDPFSILVPAGFDIDKHQGQLRPSLEVEADNTLLRVDFVREVDELLQEVRADQ 288
           M +TFPREDPFSIL+P GFDID HQGQLRP +E E DNTLLRVDFVREVD LLQEVR ++
Sbjct: 210 MAETFPREDPFSILMPPGFDIDMHQGQLRPPIETETDNTLLRVDFVREVDALLQEVRIEE 269

Query: 289 SEVQNANADGFDAESVASRLKQQEKQRTVRLVETLLELAMNLEW 320
                +  +G D E++A + KQQEKQRT+R +E +L+LA+NL+W
Sbjct: 270 DATTGSKGEGLDPEAIALKFKQQEKQRTIRQIEAILDLALNLKW 313

[Close]
BLAST of Carg26559 vs. Swiss-Prot
Match: sp|Q39089|PAC_ARATH (Protein PALE CRESS, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAC PE=2 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 9.1e-85
Identity = 158/224 (70.54%), Postives = 183/224 (81.70%), Query Frame = 0 

Query: 109 EEYREIGMRLKGFPEEDVIKARKL-------------KIEEAAEKGELTELVLLVIWNRL 168
           EEYREIG RLK FPE+D+ KARKL             +IEEAAEKGEL ELVL++IWNRL
Sbjct: 90  EEYREIGTRLKEFPEQDLRKARKLVSSFIRAAEEVEERIEEAAEKGELDELVLMIIWNRL 149

Query: 169 DLARRDDEKDAIRSLDLLYRRVETEILKREASPAMRLLNDLLNMYDNFNDEGWLKDCRKR 228
           DLARRDDEKDAIRSLDLLYRRVETEILKR+ASPAM+LLNDLLNM+D F D+ WLKDCRKR
Sbjct: 150 DLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFEDDAWLKDCRKR 209

Query: 229 MIDTFPREDPFSILVPAGFDIDKHQGQLRPSLEVEADNTLLRVDFVREVDELLQEVRADQ 288
           M +TFPREDPFSIL+P GFDID HQGQLRP +E E DNTLLRVDFVREVD LLQEVR ++
Sbjct: 210 MAETFPREDPFSILMPPGFDIDMHQGQLRPPIETETDNTLLRVDFVREVDALLQEVRIEE 269

Query: 289 SEVQNANADGFDAESVASRLKQQEKQRTVRLVETLLELAMNLEW 320
                +  +G D E++A + KQQEKQRT+R +E +L+LA+NL+W
Sbjct: 270 DATTGSKGEGLDPEAIALKFKQQEKQRTIRQIEAILDLALNLKW 313

[Close]
BLAST of Carg26559 vs. TrEMBL
Match: tr|A0A2I4GU71|A0A2I4GU71_9ROSI (protein PALE CRESS, chloroplastic OS=Juglans regia OX=51240 GN=LOC109010921 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.1e-100
Identity = 228/336 (67.86%), Postives = 257/336 (76.49%), Query Frame = 0 

Query: 1   MLAQVRWLRCSPVPPLPSASPTLPKLST----SYFLKLYSSRPVLRRSLSKEEPLIDGLP 60
           M A+V  L C   P LP+ S  L KL        F   YSS  VLRRS+SK+EPLIDGLP
Sbjct: 1   MEAKVLKLTCLLPPTLPTHSAVLAKLPVLPFPYPFKPKYSSLSVLRRSVSKDEPLIDGLP 60

Query: 61  KEYYDDVESSGCLGGLLVLWIESKEWQARQREKTKEXXXXXXXXXXXXXXXXEEYREIGM 120
           KEYYDD                  EWQARQ+ KTKE XXXXXXXXXXXXXX +EYREI M
Sbjct: 61  KEYYDD------------------EWQARQQGKTKELXXXXXXXXXXXXXXVQEYREIAM 120

Query: 121 RLKGFPEEDVIKARKL-------------KIEEAAEKGELTELVLLVIWNRLDLARRDDE 180
           RL+G+PE+DV KAR+L             KIEEAAE+GELTELVL+VIWNRLDLARRD+E
Sbjct: 121 RLQGYPEQDVKKARRLVSSFIIAAEEVEEKIEEAAERGELTELVLMVIWNRLDLARRDEE 180

Query: 181 KDAIRSLDLLYRRVETEILKREASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPRE 240
           KDAIRSLDLLYRRVETEILKREA+PAMRLLNDLL+++D F DEGWLK+C+K M+DTFPRE
Sbjct: 181 KDAIRSLDLLYRRVETEILKREATPAMRLLNDLLSIHDEFGDEGWLKECKKLMVDTFPRE 240

Query: 241 DPFSILVPAGFDIDKHQGQLRPSLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNANA 300
           DPFSILVPAGFDIDKHQG +RP L  E D+TLLRVDFVREVD LLQEVR + SE Q  NA
Sbjct: 241 DPFSILVPAGFDIDKHQGPIRPPL--EDDDTLLRVDFVREVDTLLQEVRCELSEAQ--NA 300

Query: 301 DGFDAESVASRLKQQEKQRTVRLVETLLELAMNLEW 320
            GFD ESVASRLKQQEK++T+R VE LL+LA+NL+W
Sbjct: 301 QGFDPESVASRLKQQEKKQTIRQVEALLDLAINLKW 314

[Close]
BLAST of Carg26559 vs. TrEMBL
Match: tr|A0A218XR83|A0A218XR83_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr010191 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.1e-100
Identity = 227/319 (71.16%), Postives = 252/319 (79.00%), Query Frame = 0 

Query: 14  PPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYYDDVESSGCLGGLL 73
           PPL SA   +  L TS      +S  VLRRS+SK+EPLIDGLPKEYYDD           
Sbjct: 18  PPL-SAQRRILLLPTS----RSTSALVLRRSMSKDEPLIDGLPKEYYDD----------- 77

Query: 74  VLWIESKEWQARQREKTKEXXXXXXXXXXXXXXXXEEYREIGMRLKGFPEEDVIKARKL- 133
                  EWQARQREKTKE  XXXXXXXXXXXXXXEEYREIGMRLKG+PEEDV KARKL 
Sbjct: 78  -------EWQARQREKTKELHXXXXXXXXXXXXXXEEYREIGMRLKGYPEEDVRKARKLV 137

Query: 134 ------------KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETE 193
                       KIEEAAE+GELTEL+L+VIWNRLDLARRDDEKDA+RSLDLLYRRVETE
Sbjct: 138 SSLIRAAEEVEEKIEEAAERGELTELLLMVIWNRLDLARRDDEKDAVRSLDLLYRRVETE 197

Query: 194 ILKREASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFSILVPAGFDIDKHQ 253
           ILKREASPAMRLLNDLLNM+D F++EGWLK+C+K M++TFPREDPFSILVPAGFD+DKH+
Sbjct: 198 ILKREASPAMRLLNDLLNMHDGFDNEGWLKECKKHMVETFPREDPFSILVPAGFDLDKHE 257

Query: 254 GQLRPSLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKQQEK 313
           G LRP L  EADN LLRVDFVREVD LLQEVR +Q  +Q  +A G DAESVASRLKQQEK
Sbjct: 258 GPLRPPL--EADNALLRVDFVREVDALLQEVRYEQDLLQ--SAQGLDAESVASRLKQQEK 309

Query: 314 QRTVRLVETLLELAMNLEW 320
           QRT+  VE LL+LA+NL+W
Sbjct: 318 QRTIHQVEALLDLAINLQW 309

[Close]
BLAST of Carg26559 vs. TrEMBL
Match: tr|A0A1S3BMU2|A0A1S3BMU2_CUCME (protein PALE CRESS, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491280 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 4.1e-98
Identity = 230/332 (69.28%), Postives = 242/332 (72.89%), Query Frame = 0 

Query: 1   MLAQVRWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY 60
           M AQV  LR S +P L S +P L KL TS   K YSS  VLRRS SKEEPLIDGLPKEYY
Sbjct: 1   MEAQVLCLRFSSLPQLLSTTPILSKLWTSRSSKHYSSGLVLRRSFSKEEPLIDGLPKEYY 60

Query: 61  DDVESSGCLGGLLVLWIESKEWQARQREKTKE-------------XXXXXXXXXXXXXXX 120
           DD                  EWQARQREKTKE             XXXXXXXXXXXXXXX
Sbjct: 61  DD------------------EWQARQREKTKELHXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XEEYREIGMRLKGFPEEDVIKARKLKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAI 180
           X                              EKGELTELVLLVIWNRLDLAR DDEKDA+
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGELTELVLLVIWNRLDLARCDDEKDAV 180

Query: 181 RSLDLLYRRVETEILKREASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFS 240
           RSLDLLYRRVETEILKREA+PAMRLLN+LLNMYD F++EGWLK CRK M+DTFPREDPFS
Sbjct: 181 RSLDLLYRRVETEILKREATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFS 240

Query: 241 ILVPAGFDIDKHQGQLRPSLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFD 300
           ILVPAGFDIDKHQG LRPSL VEADNTLLRVDFVREVDELLQEV A QS+VQN NAD FD
Sbjct: 241 ILVPAGFDIDKHQGPLRPSLTVEADNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFD 300

Query: 301 AESVASRLKQQEKQRTVRLVETLLELAMNLEW 320
           AESVASRLKQQEKQRT+RLVE LL+LAMNL+W
Sbjct: 301 AESVASRLKQQEKQRTIRLVEALLDLAMNLKW 314

[Close]
BLAST of Carg26559 vs. TrEMBL
Match: tr|A0A0A0KJC6|A0A0A0KJC6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G408790 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 4.1e-98
Identity = 229/332 (68.98%), Postives = 243/332 (73.19%), Query Frame = 0 

Query: 1   MLAQVRWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY 60
           M AQ+  LR S +PPL S +P LPKL TS      SS  VLRRSLSKEEPLIDGLPKEYY
Sbjct: 1   MEAQLLCLRFSSLPPLLSTTPILPKLWTSPSSHRCSSGLVLRRSLSKEEPLIDGLPKEYY 60

Query: 61  DDVESSGCLGGLLVLWIESKEWQARQREKTKE-------------XXXXXXXXXXXXXXX 120
           DD                  EWQARQREKTKE             XXXXXXXXXXXXXXX
Sbjct: 61  DD------------------EWQARQREKTKELHRXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XEEYREIGMRLKGFPEEDVIKARKLKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAI 180
           X                              EKGELTELVLLVIWNRLDLAR DDEKDA+
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGELTELVLLVIWNRLDLARCDDEKDAV 180

Query: 181 RSLDLLYRRVETEILKREASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFS 240
           RSLDLLYRRVETEILKREA+PAMRLLN+LLNMYD F++EGWLK CRK M+DTFPREDPFS
Sbjct: 181 RSLDLLYRRVETEILKREATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFS 240

Query: 241 ILVPAGFDIDKHQGQLRPSLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFD 300
           ILVPAGFDIDKHQG LRPSL VE+DNTLLRVDFVREVDELLQEV A QS+VQN NAD FD
Sbjct: 241 ILVPAGFDIDKHQGPLRPSLAVESDNTLLRVDFVREVDELLQEVGAVQSDVQNGNADSFD 300

Query: 301 AESVASRLKQQEKQRTVRLVETLLELAMNLEW 320
           AESVASRLKQQEKQRT+RLVE LL+LAMNL+W
Sbjct: 301 AESVASRLKQQEKQRTIRLVEALLDLAMNLKW 314

[Close]
BLAST of Carg26559 vs. TrEMBL
Match: tr|A0A2P5CXI7|A0A2P5CXI7_PARAD (Protein PALE CRESS OS=Parasponia andersonii OX=3476 GN=PanWU01x14_115060 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 9.1e-98
Identity = 226/337 (67.06%), Postives = 253/337 (75.07%), Query Frame = 0 

Query: 1   MLAQVRWLRCSPV----PPLPSASPTLPKLSTSYFLKLYSS-RPVLRRSLSKEEPLIDGL 60
           M  +V  L C+P      P PS    LP    +  LKL S  R VLRR +SK+EPL+DG 
Sbjct: 1   MECEVIRLTCAPSVLSHTPAPSTIARLPLSLCTSPLKLNSQPRAVLRRCVSKDEPLLDGF 60

Query: 61  PKEYYDDVESSGCLGGLLVLWIESKEWQARQREKTKEXXXXXXXXXXXXXXXXEEYREIG 120
           PKEYYDD                  EWQARQREK   XXXXXXXXXXXXXXXX  YREIG
Sbjct: 61  PKEYYDD------------------EWQARQREKXXXXXXXXXXXXXXXXXXXXXYREIG 120

Query: 121 MRLKGFPEEDVIKARKL-------------KIEEAAEKGELTELVLLVIWNRLDLARRDD 180
            RLKG+PEEDV+KAR+L             KIEEAAEKGELTELVL+VIWNRLDLARRDD
Sbjct: 121 TRLKGYPEEDVLKARQLVSSFIRSAEEVEEKIEEAAEKGELTELVLMVIWNRLDLARRDD 180

Query: 181 EKDAIRSLDLLYRRVETEILKREASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPR 240
           EKDAIRSLDLLYRRVETEILKREA+PAMRLLNDLLN++D F+DE WLK+C+KRM+DTFP 
Sbjct: 181 EKDAIRSLDLLYRRVETEILKREATPAMRLLNDLLNIHDGFDDEVWLKECKKRMVDTFPL 240

Query: 241 EDPFSILVPAGFDIDKHQGQLRPSLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNAN 300
           EDPFSI VPAGFDIDKHQG LRPSLE E D+ LLRVDFVREVD LLQEV+A+QSE Q   
Sbjct: 241 EDPFSIFVPAGFDIDKHQGPLRPSLE-EVDDALLRVDFVREVDALLQEVKAEQSEAQ--T 300

Query: 301 ADGFDAESVASRLKQQEKQRTVRLVETLLELAMNLEW 320
           A+G D ESVAS+LKQQEKQR +R V+ +L+LA+NL W
Sbjct: 301 AEGLDPESVASKLKQQEKQRVIRQVQAILDLAVNLNW 316

The following BLAST results are available for this feature:
BLAST of Carg26559 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022931090.14.8e-13585.54protein PALE CRESS, chloroplastic [Cucurbita moschata][more]
XP_023534033.13.1e-13484.94protein PALE CRESS, chloroplastic [Cucurbita pepo subsp. pepo][more]
XP_022995861.11.7e-13283.73protein PALE CRESS, chloroplastic [Cucurbita maxima][more]
XP_022159473.11.3e-12479.82protein PALE CRESS, chloroplastic [Momordica charantia][more]
XP_018847433.11.7e-10067.86PREDICTED: protein PALE CRESS, chloroplastic [Juglans regia][more]
BLAST of Carg26559 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G48120.15.0e-8670.54pale cress protein (PAC)[more]
BLAST of Carg26559 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q39089|PAC_ARATH9.1e-8570.54Protein PALE CRESS, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAC PE=2 SV... [more]
BLAST of Carg26559 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2I4GU71|A0A2I4GU71_9ROSI1.1e-10067.86protein PALE CRESS, chloroplastic OS=Juglans regia OX=51240 GN=LOC109010921 PE=4... [more]
tr|A0A218XR83|A0A218XR83_PUNGR1.1e-10071.16Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr010191 PE=4 SV=1[more]
tr|A0A1S3BMU2|A0A1S3BMU2_CUCME4.1e-9869.28protein PALE CRESS, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491280 PE=4 S... [more]
tr|A0A0A0KJC6|A0A0A0KJC6_CUCSA4.1e-9868.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G408790 PE=4 SV=1[more]
tr|A0A2P5CXI7|A0A2P5CXI7_PARAD9.1e-9867.06Protein PALE CRESS OS=Parasponia andersonii OX=3476 GN=PanWU01x14_115060 PE=4 SV... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0010239chloroplast mRNA processing
GO:0009658chloroplast organization
GO:0048366leaf development
Vocabulary: Cellular Component
TermDefinition
GO:0009536plastid
Vocabulary: INTERPRO
TermDefinition
IPR034563PALE_CRESS
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010239 chloroplast mRNA processing
biological_process GO:0009658 chloroplast organization
biological_process GO:0048366 leaf development
cellular_component GO:0009536 plastid
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg26559-RACarg26559-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 264..284
IPR034563Protein PALE CRESSPANTHERPTHR37219FAMILY NOT NAMEDcoord: 38..319

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg26559Cla006075Watermelon (97103) v1carwmB0943
Carg26559ClCG07G000070Watermelon (Charleston Gray)carwcgB0918
Carg26559CmaCh02G018100Cucurbita maxima (Rimu)carcmaB1290
Carg26559CmoCh02G018560Cucurbita moschata (Rifu)carcmoB1260
Carg26559Lsi05G009060Bottle gourd (USVL1VR-Ls)carlsiB861
Carg26559Cp4.1LG05g01720Cucurbita pepo (Zucchini)carcpeB1305
Carg26559Cla97C07G128320Watermelon (97103) v2carwmbB0991
Carg26559Bhi05G000269Wax gourdcarwgoB1089
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None