Cp4.1LG05g00850 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g00850
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionZinc finger HIT domain-containing protein 3
LocationCp4.1LG05 : 515392 .. 518246 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTGGGGTACTTCAATTTTGTCAAAACCCTCGTGGGAAGAGGAAGCCGCGCGCCAAACTCGCTTTTGCTTGGGCTGAGAACTTCACATTCTCTCCTTCCGGTGAGGCCTCTACTTTTCTTCTGCTCTTCTTATCGCCGTCTTCGTTAATCCGATTGTATGGTTAAACTTGGTGAATTCGATTCTCTCTTTCTATTTTTCTGCTTTCGGAATCTGTATGTTTGAGTAATTTATATAAATATGTTTTGTTAGTGTGTCTATAATTGTGGAGTGATCAAGTTGAAGTTGAAGTTGAAGTAGCAGCTCTAGCATTGGTTATTCTGGTGAAATCTTAATCCTCCGGACTGAGTTTAAACTTTATTGTTGATGATAGAAGCATCAAGTGTTAATCGCTCTCAGCTTGATAGTTCTACTCGTTTCTGAAAATTTAATTTTAAAATGCGTGTGTGTTTGTATCAACATGTTAATAATGTGGTATCAACAGAAGTAAATTTATCAAAAACATGTTTGAAAGTGGCTCGCCGTGGATATGTGGATATGTATTCTCGAAGTTTTTGTAAGGTTCTAATTTATCCTTTTTTCGTTGCAGCATTTGAGATTTTAAGAAATTGAACATTCTATGGGTCCTCGGCAATGTCAGGTCTGCAATGAAGCACCATCCAAATATAAATGCCCCCTATGCCTTGTTCCTTAGTAAGAAAAACAAAAGAATTTCTTTTAGGTCATGTTCGTGTAGTTTTATTGAAAACTCTCTGACCTTCACTCATTTTTGTGGTGGTTTTCTCTGTTTCATTTTGCTTGAAGCTGCTCTCTGGTTTGTTTCAAGAAACACAAAGGTACTGTTCTTTTAGCCTTGGGTTTTCTTGTTCTATTTATGTTCTATATTTCGTAAGCAGTTTAATGTTCAGGTGGTCTACAGTTCAAGAATAACTGTAGTGAAGCCTTTTATTTTGATATAGTATCATGATGTCGCGAAATCTCTAGGCTTTTGGGTTGGTGTGGCTTATGCTCTGTTATGAATTTGAATACACTGCTTAAGTTCAAGGCAGAAATTTTTTCTCATGCTCCCTTTCCTGTATTTTTACCTTTTAACTCGTGGGTTTTGAATTAACCATGAAGGCTACCTACCTAAGATTTAATATTTTACGAGTTACTTTCATAACATAATGTAGTAGGGCATGGACACTTGCAAATATTTAAAAAAAAACTCGAGGGTCTGGTATCTGTCTAGGGTTGAATACTTGCTAGTTACATATTTTCAAGCTGAGGCTCTTGAATCTAATGATCCTAAAAGTAGTTTAGAGTTTTTTCTTTTATGTTTCACTGGCATTCTGTGGTTAGCATTCAATTCTATTGGCATGATAACTAATATCATTTGCAACTTTTGCAGAAGTGCCCTGTGTTAAGCCTGTGTCTGCAGAGGACCAATCAAGTAAGATGTTCTCATGTTTCGTTTATTCACTTGTGTCGTTTATCTTCTTTAAATGCTGAATGAATGTTCATAGACAGCCAATAATTCCTGATTCTAGGCTTTTGTATGCTGATCAAGTCAATAAACTTTCTTTTCCTCATTCATTCTTCCAGGGTTTTTTATTGCATGCCCTTGTTTTTCTTTCATTTTCCTTATTGAAAGTTTGGTTTCTTTAAAAAAAAAAAGAAAAAAAAGAAAAAAACTTCCACTATTCATACTCACTGATGGTTTTTATTCTTTTTGTATACAGTTGCTCCTAATGGATCACCTGTAGATAGGCCAGTATTTGTTGGAGACCAGAATGAAGTACTAGAAAAGGCGCAGCTAGAGGCTATTGGTACGATTCCTAACTCCTGCTTTTATTACCTCAATTTATTCATGGGATCATTTGGCCGCAAAAAGCACTTGACATGCCTTCCTAATTCCTTACAAGAATGATTAAAAAAAAAAAAACTCACGATGATTATGGTAGACAAAAATCTTCGATTATCAAAGTGAGAAATGTTGGAAGGTTAGATCAAATGAAAANAAAAAAAAAAAAAAAAAAAAAAACTATAATATGATTACCTTCTAAAGACTGGTTGAACTGCTGGAACTTTGGACGGTAAAATATTATTTGAAAAGCGGGTTTAGGTTTATAGTTTGAAAGTGGACAATTTTTATGTCAACCAGAACCTAGTCAGGGAAACTATGTTTATCACATTTTTGTTTATGCGTCAAGAAGAACTTCGTTGCTAGTTGTTAGGACCATTAGTGAACTTACAATCTGCGTTTTCCCCAATTCTTATATTCTCATGCATCTTCCATACAGCTTCTTCCTCAGAAGTACGCAATACTTTGAATGATGAAAAACTCCGTAGCCTCATCTGTGCCATTGATAGCTCACCAGATCCAGAAATTGTGAGTAGTCTGCATCTTCCATTTCATGAGAAATTATACTCTTGAACAACTTTTTGCCCCACTATAGTTAAAAACGTGGGTTTAAGTTGGTTATTGCTCTTATTAGGAGCTTGATAAAGCTATGGAAGATGAAGCATTTCGCATACTAAGCAGCAAGGTACTATTTTCGGTCAAAGTGTTATCAAATATTTATGTTCATCTGTGATTTATGACGCAGTCGTTATGAGCATGTAAGATAAATAGTTTCGTTTGCTTTAAGCATTTACTCTGTTTGTTTGATAGATATCATCGATCATCGGCTCCTAGCCCTGGTGGTCACAGATGGAGGGGAAAAAAGTTGTCCAAGATATATATATATGTATGATCAATGGGACATTTCTGCCTCATTGCCTTAGGTGCTCGGCTCCGAAGATGCTGAAATCAAGGACAAGGATGCAACGGTTAACAGAATGAAGTATGCTGGGATTGACCATCCAAGAGCGTAG

mRNA sequence

CATTGGGGTACTTCAATTTTGTCAAAACCCTCGTGGGAAGAGGAAGCCGCGCGCCAAACTCGCTTTTGCTTGGGCTGAGAACTTCACATTCTCTCCTTCCGCATTTGAGATTTTAAGAAATTGAACATTCTATGGGTCCTCGGCAATGTCAGGTCTGCAATGAAGCACCATCCAAATATAAATGCCCCCTATGCCTTGTTCCTTACTGCTCTCTGGTTTGTTTCAAGAAACACAAAGAAGTGCCCTGTGTTAAGCCTGTGTCTGCAGAGGACCAATCAATTGCTCCTAATGGATCACCTGTAGATAGGCCAGTATTTGTTGGAGACCAGAATGAAGTACTAGAAAAGGCGCAGCTAGAGGCTATTGCTTCTTCCTCAGAAGTACGCAATACTTTGAATGATGAAAAACTCCGTAGCCTCATCTGTGCCATTGATAGCTCACCAGATCCAGAAATTGAGCTTGATAAAGCTATGGAAGATGAAGCATTTCGCATACTAAGCAGCAAGGTGCTCGGCTCCGAAGATGCTGAAATCAAGGACAAGGATGCAACGGTTAACAGAATGAAGTATGCTGGGATTGACCATCCAAGAGCGTAG

Coding sequence (CDS)

ATGGGTCCTCGGCAATGTCAGGTCTGCAATGAAGCACCATCCAAATATAAATGCCCCCTATGCCTTGTTCCTTACTGCTCTCTGGTTTGTTTCAAGAAACACAAAGAAGTGCCCTGTGTTAAGCCTGTGTCTGCAGAGGACCAATCAATTGCTCCTAATGGATCACCTGTAGATAGGCCAGTATTTGTTGGAGACCAGAATGAAGTACTAGAAAAGGCGCAGCTAGAGGCTATTGCTTCTTCCTCAGAAGTACGCAATACTTTGAATGATGAAAAACTCCGTAGCCTCATCTGTGCCATTGATAGCTCACCAGATCCAGAAATTGAGCTTGATAAAGCTATGGAAGATGAAGCATTTCGCATACTAAGCAGCAAGGTGCTCGGCTCCGAAGATGCTGAAATCAAGGACAAGGATGCAACGGTTAACAGAATGAAGTATGCTGGGATTGACCATCCAAGAGCGTAG

Protein sequence

MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSPVDRPVFVGDQNEVLEKAQLEAIASSSEVRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFRILSSKVLGSEDAEIKDKDATVNRMKYAGIDHPRA
Homology
[Close]
BLAST of Cp4.1LG05g00850 vs. Swiss-Prot
Match: ZNHI3_HUMAN (Zinc finger HIT domain-containing protein 3 OS=Homo sapiens GN=ZNHIT3 PE=1 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 5.6e-08
Identity = 41/136 (30.15%), Postives = 67/136 (49.26%), Query Frame = 1 

Query: 6   CQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEV--PCVKPVSAEDQSIAPNGS--PVDRP- 65
           C +C E P KY+CP C VPYCS+VCF+KHKE   P  +PV  + +S  P  +  PV+   
Sbjct: 11  CVICLEKP-KYRCPACRVPYCSVVCFRKHKEQCNPETRPVEKKIRSALPTKTVKPVENKD 70

Query: 66  --------VFVGDQNEVLEKAQLEAIASSSEVRNTLNDEKLRSLICAIDSSPDPEIELDK 125
                   +   ++ + +    L+ +  S+ +R+ L +  LR L+  +D   D    +  
Sbjct: 71  DDDSIADFLNSDEEEDRVSLQNLKNLGESATLRSLLLNPHLRQLMVNLDQGEDKAKLMRA 130

Query: 126 AMEDEAFRILSSKVLG 129
            M++  F   +   LG
Sbjct: 131 YMQEPLFVEFADCCLG 145

[Close]
BLAST of Cp4.1LG05g00850 vs. Swiss-Prot
Match: ZNHI3_MACMU (Zinc finger HIT domain-containing protein 3 (Fragment) OS=Macaca mulatta GN=ZNHIT3 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.6e-07
Identity = 40/136 (29.41%), Postives = 65/136 (47.79%), Query Frame = 1 

Query: 6   CQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEV--PCVKPVSAEDQSIAP--NGSPVDRP- 65
           C +C E P KY+CP C VPYCS+ CF+KHKE   P  +PV  + +S  P     PV+   
Sbjct: 3   CVICLEKP-KYRCPACRVPYCSVACFRKHKEQCNPEARPVEKKIRSALPTKTXKPVENKD 62

Query: 66  --------VFVGDQNEVLEKAQLEAIASSSEVRNTLNDEKLRSLICAIDSSPDPEIELDK 125
                   +   ++ + +    L+ +  S+ +R+ L +  LR L+  +D   D    +  
Sbjct: 63  DDDSIADFLNSDEEEDRVSLQNLKNLGKSATLRSLLLNPHLRQLMVNLDQGEDKAKLMRA 122

Query: 126 AMEDEAFRILSSKVLG 129
            M++  F   +   LG
Sbjct: 123 YMQEPLFVEFADCCLG 137

[Close]
BLAST of Cp4.1LG05g00850 vs. Swiss-Prot
Match: ZNHI3_MOUSE (Zinc finger HIT domain-containing protein 3 OS=Mus musculus GN=Znhit3 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.2e-06
Identity = 40/134 (29.85%), Postives = 64/134 (47.76%), Query Frame = 1 

Query: 6   CQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEV------PCVK-----PVSAEDQSIAPNG 65
           C VC E P KY+CP C VPYCS+ CF+KHKE       P  K     PV +E+     + 
Sbjct: 11  CVVCLEKP-KYRCPTCRVPYCSVPCFQKHKEQCSSEARPVEKRRAGPPVRSEESK--DDD 70

Query: 66  SPVDRPVFVGDQNEVLEKAQLEAIASSSEVRNTLNDEKLRSLICAIDSSPDPEIELDKAM 125
           S V   +   ++ + +    L+ +  S  +R+ L +  LR L+ ++D   +    +   M
Sbjct: 71  SSVADFLNSDEEEDRVSLQNLKNLGESETLRSLLLNPHLRQLMISLDQGDNKAKLMRACM 130

Query: 126 EDEAFRILSSKVLG 129
           ++  F   +   LG
Sbjct: 131 QEPLFVEFADCCLG 141

[Close]
BLAST of Cp4.1LG05g00850 vs. Swiss-Prot
Match: ZNHI3_BOVIN (Zinc finger HIT domain-containing protein 3 OS=Bos taurus GN=ZNHIT3 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 6.8e-06
Identity = 23/37 (62.16%), Postives = 25/37 (67.57%), Query Frame = 1 

Query: 2  GPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVP 39
          G   C VC E P KY+CP C VPYCSL CF+KHK  P
Sbjct: 7  GTAVCVVCLEKP-KYRCPACRVPYCSLPCFRKHKAPP 42

[Close]
BLAST of Cp4.1LG05g00850 vs. Swiss-Prot
Match: ZNHI3_PANTR (Zinc finger HIT domain-containing protein 3 (Fragment) OS=Pan troglodytes GN=ZNHIT3 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 8.9e-06
Identity = 36/127 (28.35%), Postives = 61/127 (48.03%), Query Frame = 1 

Query: 15  KYKCPLCLVPYCSLVCFKKHKEV--PCVKPVSAEDQSIAPNGS--PVDRP---------V 74
           KY+CP C VPYCS+ CF+KHKE   P  +PV  + +S  P  +  PV+           +
Sbjct: 5   KYRCPACRVPYCSVACFRKHKEQCNPETRPVEKKIRSALPTKTVKPVENKDDDDSIADFL 64

Query: 75  FVGDQNEVLEKAQLEAIASSSEVRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFRI 129
              ++ + +    L+ +  S+ +R+ L +  LR L+  +D   D    +   M++  F  
Sbjct: 65  NSDEEEDRVSLQNLKNLGESATLRSLLLNPHLRQLMVNLDQGEDKAKLMRAYMQEPLFVE 124

[Close]
BLAST of Cp4.1LG05g00850 vs. TrEMBL
Match: A0A0A0KDK5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G403610 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.4e-50
Identity = 102/127 (80.31%), Postives = 111/127 (87.40%), Query Frame = 1 

Query: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPC-VKPVSAEDQSIAPNGSPVDR 60
           M PR+CQVCNEAPSKYKCPLCL PYCSLVCFKKHKEVPC +KPVS  DQS A NG+ VDR
Sbjct: 1   MAPRKCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCAIKPVSEGDQSTACNGTFVDR 60

Query: 61  PVFVGDQNEVLEKAQLEAIASSSEVRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAF 120
           P+ VGDQNEVLEK+QLEAIASSSE+ N LNDEKL+  I AIDSSPDPE E+DKAMEDEAF
Sbjct: 61  PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLQKFILAIDSSPDPETEVDKAMEDEAF 120

Query: 121 RILSSKV 127
           RI SSK+
Sbjct: 121 RIFSSKI 127

[Close]
BLAST of Cp4.1LG05g00850 vs. TrEMBL
Match: C6T4W0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G042900 PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.5e-39
Identity = 82/129 (63.57%), Postives = 103/129 (79.84%), Query Frame = 1 

Query: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSPVDRP 60
           MGPRQCQVCNEA SKYKCP C +PYCSLVCFKKHKE+PCVKP  +E ++ A + S  ++P
Sbjct: 1   MGPRQCQVCNEAQSKYKCPSCYLPYCSLVCFKKHKELPCVKPQPSEAKTTAVSESIAEKP 60

Query: 61  VFVGDQNEVLEKAQLEAIASSSEVRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFR 120
           + V + +EVLEK QLEAIASSSE+R+ LND+ L+ LIC ID S + E ELDKAM +EAFR
Sbjct: 61  LVVDESSEVLEKFQLEAIASSSEIRDALNDKALQELICRIDCSSNAENELDKAMAEEAFR 120

Query: 121 ILSSKVLGS 130
           +L+ K+L +
Sbjct: 121 LLTDKILST 129

[Close]
BLAST of Cp4.1LG05g00850 vs. TrEMBL
Match: A0A0B2PEI8_GLYSO (Zinc finger HIT domain-containing protein 3 OS=Glycine soja GN=glysoja_026497 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.3e-39
Identity = 82/127 (64.57%), Postives = 102/127 (80.31%), Query Frame = 1 

Query: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSPVDRP 60
           MGPRQCQVCNEA SKYKCP C +PYCSLVCFKKHKE+PCVKP  +E ++ A + S  ++P
Sbjct: 1   MGPRQCQVCNEAQSKYKCPSCYLPYCSLVCFKKHKELPCVKPQPSEAKTTAVSESIAEKP 60

Query: 61  VFVGDQNEVLEKAQLEAIASSSEVRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFR 120
           + V + +EVLEK QLEAIASSSE+R+ LND+ L+ LIC ID S + E ELDKAM +EAFR
Sbjct: 61  LVVDESSEVLEKFQLEAIASSSEIRDALNDKALQELICRIDCSSNAENELDKAMAEEAFR 120

Query: 121 ILSSKVL 128
           +L+ KV+
Sbjct: 121 LLTDKVM 127

[Close]
BLAST of Cp4.1LG05g00850 vs. TrEMBL
Match: K7LZG3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G130200 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.6e-38
Identity = 79/129 (61.24%), Postives = 100/129 (77.52%), Query Frame = 1 

Query: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSPVDRP 60
           MGPRQCQVCN+  SKYKCP C +PYCSLVCFKKHKE PCVKP  +E ++ A + S V++P
Sbjct: 1   MGPRQCQVCNQTQSKYKCPSCYLPYCSLVCFKKHKESPCVKPQPSETKATAVSESFVEKP 60

Query: 61  VFVGDQNEVLEKAQLEAIASSSEVRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFR 120
           +   + +EVL+K QLEAIASSSE+R+ LNDE L+ LIC ID S + E ELDKAM +EAFR
Sbjct: 61  LVADESSEVLQKFQLEAIASSSEIRDALNDEALQELICRIDGSSNAENELDKAMAEEAFR 120

Query: 121 ILSSKVLGS 130
           + + K+L +
Sbjct: 121 LFTDKILST 129

[Close]
BLAST of Cp4.1LG05g00850 vs. TrEMBL
Match: A0A151RJW5_CAJCA (Zinc finger HIT domain-containing protein 3 OS=Cajanus cajan GN=KK1_035737 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.2e-37
Identity = 78/134 (58.21%), Postives = 104/134 (77.61%), Query Frame = 1 

Query: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSPVDRP 60
           MGPRQCQVC++A SKYKCP C +PYCSLVCFKKHKE PCVKP  +E ++ A + S V++P
Sbjct: 1   MGPRQCQVCDQAQSKYKCPSCYLPYCSLVCFKKHKESPCVKPQPSEAKTTAVSESIVEKP 60

Query: 61  VFVGDQNEVLEKAQLEAIASSSEVRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFR 120
           + V + + VL+K QLEAIASSSE+R+ LND+ L+ LIC ID S + + ELDKAM +EAFR
Sbjct: 61  LVVNETSHVLQKFQLEAIASSSEIRDALNDKSLQELICHIDCSSNADNELDKAMAEEAFR 120

Query: 121 ILSSKVLGSEDAEI 135
           + + KV+   D+++
Sbjct: 121 LFTDKVMLYVDSDV 134

[Close]
BLAST of Cp4.1LG05g00850 vs. TAIR10
Match: AT4G28820.1 (AT4G28820.1 HIT-type Zinc finger family protein)

HSP 1 Score: 120.2 bits (300), Expect = 1.1e-27
Identity = 68/157 (43.31%), Postives = 83/157 (52.87%), Query Frame = 1 

Query: 6   CQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSP--------- 65
           C++C +  SKYKCP CLVPYCSL CFK HKE PC KP         P  SP         
Sbjct: 9   CEICEKVVSKYKCPSCLVPYCSLGCFKIHKETPCAKPSDPSSTEEKPAASPAKEVPVKRP 68

Query: 66  ------------------------VDRPVFVGDQNEVLEKAQLEAIASSSEVRNTLNDEK 125
                                   V RP+ V ++  +LEK Q EAIASSSE+R  L DE 
Sbjct: 69  EEANDVVEKTQQKASAASPAKEIPVARPIIVEEEKYILEKTQFEAIASSSEIREALKDEP 128

Query: 126 LRSLICAIDSSPDPEIELDKAMEDEAFRILSSKVLGS 130
           L+ LI +IDSS +P  ELD+AM  EAFR  + K+L +
Sbjct: 129 LQKLIYSIDSSSNPLQELDEAMGIEAFREFTDKILSN 165

[Close]
BLAST of Cp4.1LG05g00850 vs. NCBI nr
Match: gi|659129664|ref|XP_008464779.1| (PREDICTED: zinc finger HIT domain-containing protein 3 isoform X1 [Cucumis melo])

HSP 1 Score: 213.4 bits (542), Expect = 2.8e-52
Identity = 106/127 (83.46%), Postives = 112/127 (88.19%), Query Frame = 1 

Query: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPC-VKPVSAEDQSIAPNGSPVDR 60
           M PR+CQVCNEAPSKYKCPLCL PYCSLVCFKKHKEVPC +KPVS EDQS APNGS VDR
Sbjct: 1   MAPRECQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCAIKPVSEEDQSTAPNGSFVDR 60

Query: 61  PVFVGDQNEVLEKAQLEAIASSSEVRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAF 120
           P+ VGDQNEVLEK+QLEAIASSSE+ N LNDEKLR  I AIDSS DPE ELDKAMEDEAF
Sbjct: 61  PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETELDKAMEDEAF 120

Query: 121 RILSSKV 127
           RI SSK+
Sbjct: 121 RIFSSKI 127

[Close]
BLAST of Cp4.1LG05g00850 vs. NCBI nr
Match: gi|449458039|ref|XP_004146755.1| (PREDICTED: zinc finger HIT domain-containing protein 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 206.5 bits (524), Expect = 3.4e-50
Identity = 102/127 (80.31%), Postives = 111/127 (87.40%), Query Frame = 1 

Query: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPC-VKPVSAEDQSIAPNGSPVDR 60
           M PR+CQVCNEAPSKYKCPLCL PYCSLVCFKKHKEVPC +KPVS  DQS A NG+ VDR
Sbjct: 1   MAPRKCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCAIKPVSEGDQSTACNGTFVDR 60

Query: 61  PVFVGDQNEVLEKAQLEAIASSSEVRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAF 120
           P+ VGDQNEVLEK+QLEAIASSSE+ N LNDEKL+  I AIDSSPDPE E+DKAMEDEAF
Sbjct: 61  PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLQKFILAIDSSPDPETEVDKAMEDEAF 120

Query: 121 RILSSKV 127
           RI SSK+
Sbjct: 121 RIFSSKI 127

[Close]
BLAST of Cp4.1LG05g00850 vs. NCBI nr
Match: gi|351721106|ref|NP_001238734.1| (uncharacterized protein LOC100527614 [Glycine max])

HSP 1 Score: 170.6 bits (431), Expect = 2.1e-39
Identity = 82/129 (63.57%), Postives = 103/129 (79.84%), Query Frame = 1 

Query: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSPVDRP 60
           MGPRQCQVCNEA SKYKCP C +PYCSLVCFKKHKE+PCVKP  +E ++ A + S  ++P
Sbjct: 1   MGPRQCQVCNEAQSKYKCPSCYLPYCSLVCFKKHKELPCVKPQPSEAKTTAVSESIAEKP 60

Query: 61  VFVGDQNEVLEKAQLEAIASSSEVRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFR 120
           + V + +EVLEK QLEAIASSSE+R+ LND+ L+ LIC ID S + E ELDKAM +EAFR
Sbjct: 61  LVVDESSEVLEKFQLEAIASSSEIRDALNDKALQELICRIDCSSNAENELDKAMAEEAFR 120

Query: 121 ILSSKVLGS 130
           +L+ K+L +
Sbjct: 121 LLTDKILST 129

[Close]
BLAST of Cp4.1LG05g00850 vs. NCBI nr
Match: gi|734328074|gb|KHN05909.1| (Zinc finger HIT domain-containing protein 3 [Glycine soja])

HSP 1 Score: 169.5 bits (428), Expect = 4.7e-39
Identity = 82/127 (64.57%), Postives = 102/127 (80.31%), Query Frame = 1 

Query: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSPVDRP 60
           MGPRQCQVCNEA SKYKCP C +PYCSLVCFKKHKE+PCVKP  +E ++ A + S  ++P
Sbjct: 1   MGPRQCQVCNEAQSKYKCPSCYLPYCSLVCFKKHKELPCVKPQPSEAKTTAVSESIAEKP 60

Query: 61  VFVGDQNEVLEKAQLEAIASSSEVRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFR 120
           + V + +EVLEK QLEAIASSSE+R+ LND+ L+ LIC ID S + E ELDKAM +EAFR
Sbjct: 61  LVVDESSEVLEKFQLEAIASSSEIRDALNDKALQELICRIDCSSNAENELDKAMAEEAFR 120

Query: 121 ILSSKVL 128
           +L+ KV+
Sbjct: 121 LLTDKVM 127

[Close]
BLAST of Cp4.1LG05g00850 vs. NCBI nr
Match: gi|1009132492|ref|XP_015883402.1| (PREDICTED: zinc finger HIT domain-containing protein 3 [Ziziphus jujuba])

HSP 1 Score: 167.5 bits (423), Expect = 1.8e-38
Identity = 80/129 (62.02%), Postives = 100/129 (77.52%), Query Frame = 1 

Query: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSPVDRP 60
           MGPRQCQVCN+A SKYKCP CL PYCSL CFKKHKE+PC KP+S+E +    + S + RP
Sbjct: 1   MGPRQCQVCNDAVSKYKCPSCLAPYCSLTCFKKHKEIPCSKPLSSEPKLATGSESLIGRP 60

Query: 61  VFVGDQNEVLEKAQLEAIASSSEVRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFR 120
           + V   +EVL+++QLEAIA+SSE+RN L DE L+ LI  ID SPD E ELDKAM+ E+FR
Sbjct: 61  LSVHKPSEVLQRSQLEAIATSSEIRNALKDENLQKLISKIDCSPDAENELDKAMDSESFR 120

Query: 121 ILSSKVLGS 130
           IL+ K+L +
Sbjct: 121 ILTDKILST 129

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g00850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZNHI3_HUMAN5.6e-0830.15Zinc finger HIT domain-containing protein 3 OS=Homo sapiens GN=ZNHIT3 PE=1 SV=2[more]
ZNHI3_MACMU1.6e-0729.41Zinc finger HIT domain-containing protein 3 (Fragment) OS=Macaca mulatta GN=ZNHI... [more]
ZNHI3_MOUSE5.2e-0629.85Zinc finger HIT domain-containing protein 3 OS=Mus musculus GN=Znhit3 PE=1 SV=1[more]
ZNHI3_BOVIN6.8e-0662.16Zinc finger HIT domain-containing protein 3 OS=Bos taurus GN=ZNHIT3 PE=2 SV=1[more]
ZNHI3_PANTR8.9e-0628.35Zinc finger HIT domain-containing protein 3 (Fragment) OS=Pan troglodytes GN=ZNH... [more]
BLAST of Cp4.1LG05g00850 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDK5_CUCSA2.4e-5080.31Uncharacterized protein OS=Cucumis sativus GN=Csa_6G403610 PE=4 SV=1[more]
C6T4W0_SOYBN1.5e-3963.57Uncharacterized protein OS=Glycine max GN=GLYMA_10G042900 PE=2 SV=1[more]
A0A0B2PEI8_GLYSO3.3e-3964.57Zinc finger HIT domain-containing protein 3 OS=Glycine soja GN=glysoja_026497 PE... [more]
K7LZG3_SOYBN3.6e-3861.24Uncharacterized protein OS=Glycine max GN=GLYMA_13G130200 PE=4 SV=1[more]
A0A151RJW5_CAJCA5.2e-3758.21Zinc finger HIT domain-containing protein 3 OS=Cajanus cajan GN=KK1_035737 PE=4 ... [more]
BLAST of Cp4.1LG05g00850 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G28820.11.1e-2743.31 HIT-type Zinc finger family protein[more]
BLAST of Cp4.1LG05g00850 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659129664|ref|XP_008464779.1|2.8e-5283.46PREDICTED: zinc finger HIT domain-containing protein 3 isoform X1 [Cucumis melo][more]
gi|449458039|ref|XP_004146755.1|3.4e-5080.31PREDICTED: zinc finger HIT domain-containing protein 3 isoform X1 [Cucumis sativ... [more]
gi|351721106|ref|NP_001238734.1|2.1e-3963.57uncharacterized protein LOC100527614 [Glycine max][more]
gi|734328074|gb|KHN05909.1|4.7e-3964.57Zinc finger HIT domain-containing protein 3 [Glycine soja][more]
gi|1009132492|ref|XP_015883402.1|1.8e-3862.02PREDICTED: zinc finger HIT domain-containing protein 3 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007529Znf_HIT
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g00850.1Cp4.1LG05g00850.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007529Zinc finger, HIT-typePFAMPF04438zf-HITcoord: 5..32
score: 3.2
IPR007529Zinc finger, HIT-typePROFILEPS51083ZF_HITcoord: 6..39
score: 11
NoneNo IPR availablePANTHERPTHR13483UNCHARACTERIZEDcoord: 1..149
score: 1.4
NoneNo IPR availablePANTHERPTHR13483:SF8SUBFAMILY NOT NAMEDcoord: 1..149
score: 1.4
NoneNo IPR availableunknownSSF144232HIT/MYND zinc finger-likecoord: 4..37
score: 1.43

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g00850CmaCh02G017020Cucurbita maxima (Rimu)cmacpeB647
Cp4.1LG05g00850ClCG07G001620Watermelon (Charleston Gray)cpewcgB683
Cp4.1LG05g00850Lsi05G010750Bottle gourd (USVL1VR-Ls)cpelsiB616
Cp4.1LG05g00850Bhi05G000093Wax gourdcpewgoB0936
Cp4.1LG05g00850Carg08922Silver-seed gourdcarcpeB1099
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g00850Silver-seed gourdcarcpeB0107
Cp4.1LG05g00850Silver-seed gourdcarcpeB0328
Cp4.1LG05g00850Silver-seed gourdcarcpeB0335
Cp4.1LG05g00850Silver-seed gourdcarcpeB1332
Cp4.1LG05g00850Silver-seed gourdcarcpeB1506
Cp4.1LG05g00850Cucumber (Chinese Long) v3cpecucB0893
Cp4.1LG05g00850Cucumber (Chinese Long) v3cpecucB0889
Cp4.1LG05g00850Cucumber (Chinese Long) v3cpecucB0901
Cp4.1LG05g00850Cucumber (Chinese Long) v3cpecucB0951
Cp4.1LG05g00850Wax gourdcpewgoB0923
Cp4.1LG05g00850Cucurbita pepo (Zucchini)cpecpeB189
Cp4.1LG05g00850Cucurbita pepo (Zucchini)cpecpeB273
Cp4.1LG05g00850Cucurbita pepo (Zucchini)cpecpeB340
Cp4.1LG05g00850Cucurbita pepo (Zucchini)cpecpeB478
Cp4.1LG05g00850Cucurbita pepo (Zucchini)cpecpeB507
Cp4.1LG05g00850Cucumber (Gy14) v1cgycpeB0138
Cp4.1LG05g00850Cucumber (Gy14) v1cgycpeB0381
Cp4.1LG05g00850Cucumber (Gy14) v1cgycpeB0683
Cp4.1LG05g00850Cucurbita maxima (Rimu)cmacpeB290
Cp4.1LG05g00850Cucurbita maxima (Rimu)cmacpeB407
Cp4.1LG05g00850Cucurbita maxima (Rimu)cmacpeB543
Cp4.1LG05g00850Cucurbita maxima (Rimu)cmacpeB843
Cp4.1LG05g00850Cucurbita maxima (Rimu)cmacpeB930
Cp4.1LG05g00850Cucurbita moschata (Rifu)cmocpeB252
Cp4.1LG05g00850Cucurbita moschata (Rifu)cmocpeB369
Cp4.1LG05g00850Cucurbita moschata (Rifu)cmocpeB498
Cp4.1LG05g00850Cucurbita moschata (Rifu)cmocpeB596
Cp4.1LG05g00850Cucurbita moschata (Rifu)cmocpeB791
Cp4.1LG05g00850Cucurbita moschata (Rifu)cmocpeB865
Cp4.1LG05g00850Wild cucumber (PI 183967)cpecpiB718
Cp4.1LG05g00850Wild cucumber (PI 183967)cpecpiB726
Cp4.1LG05g00850Cucumber (Chinese Long) v2cpecuB715
Cp4.1LG05g00850Cucumber (Chinese Long) v2cpecuB716
Cp4.1LG05g00850Cucumber (Chinese Long) v2cpecuB724
Cp4.1LG05g00850Cucumber (Chinese Long) v2cpecuB769
Cp4.1LG05g00850Bottle gourd (USVL1VR-Ls)cpelsiB584
Cp4.1LG05g00850Bottle gourd (USVL1VR-Ls)cpelsiB611
Cp4.1LG05g00850Bottle gourd (USVL1VR-Ls)cpelsiB617
Cp4.1LG05g00850Watermelon (Charleston Gray)cpewcgB630
Cp4.1LG05g00850Watermelon (Charleston Gray)cpewcgB679
Cp4.1LG05g00850Watermelon (97103) v1cpewmB701
Cp4.1LG05g00850Watermelon (97103) v1cpewmB706
Cp4.1LG05g00850Watermelon (97103) v1cpewmB752
Cp4.1LG05g00850Melon (DHL92) v3.5.1cpemeB690
Cp4.1LG05g00850Melon (DHL92) v3.5.1cpemeB702
Cp4.1LG05g00850Cucumber (Gy14) v2cgybcpeB249
Cp4.1LG05g00850Cucumber (Gy14) v2cgybcpeB424
Cp4.1LG05g00850Cucumber (Gy14) v2cgybcpeB432
Cp4.1LG05g00850Cucumber (Gy14) v2cgybcpeB976
Cp4.1LG05g00850Melon (DHL92) v3.6.1cpemedB822
Cp4.1LG05g00850Melon (DHL92) v3.6.1cpemedB825
Cp4.1LG05g00850Melon (DHL92) v3.6.1cpemedB834