CmaCh02G017020 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh02G017020
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionZinc finger HIT domain-containing protein 3
LocationCma_Chr02 : 9584874 .. 9588082 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGGAAGGGGAAGCCGCGCGCCAAACTCGCTTTTGCTTCGGCTGAGAACTTCACAATCTCTCCTTCCGGTGAGGCCTCTACTTTTCTTCTGCTCTTCTTATCGCCGTCTTCATTAATCCGATTGTATGGTTAAACTTGCTGAATTCGATTTTCTCTTTCTCTGTCTATTTTTCTGCTTTCGGAATCTGTATGTTTGAGTAATTTATATAAATATGTTTTCTTAGTGTGTCTATAATTGTGGAGTGATCAAGTTGAAGTTGAAGTTGAAGTAGCAGCTCTAGCATTGGTTATTCTGGTGAAATCTTAATCCTCCGGACTGAATTTAACTTTATTATTGATGATAGAAGCATCAAGTCTTAATCGCTCTCAGCTTGATAGTTCTACTCGTTTCTGAAAATTTAATTTTAAAATGCGTGTGTTTGTCAACATGTTAATAATGTGGTATCAACAGAAGCAAATTTATCAAAAACATGTTTGAAAGTGGCTCGCCGTGGATATGTGGATATCTATTCTCAAAGTTTTTGTAGGGTTCTAATTTATCCTTTTTTCGTTGCAGCATTTAAGGTTTTAAGAAACTGAACATTCTATGGGTCCTCGGCAATGTCAGGTCTGCAATGAAGCACCATCCAAATATAAATGCCCCCTATGCCTTGTTCCTTAGTAAGAAAAACAAAAGAATTTCTTTTAGGTCATGTTCGTGTGGTTTTATTGAAAACTCTCTGACCTTCACTCATTTTTGTGGTGGTTTTCTCTGTTTCATTTTGCTTGAAGCTGCTCTCTGGTTTGTTTCAAGAAACACAAAGGTACTGTTCTTTTAGCCTTGGGTTTTCTTGTTCTATTTATGTTCTATATTTCGTAAGCAGTTTGATGTTCAGGTGGTCTACAGTTCAAGAATAACTGTAATGAAGCCTTTTATTTTGATATAGTATCATGATGTCGCGAAATCTCTAGGCTTTTGGGTTGGTGTGGCTTATGCTCTGTTATGAATTTGAATACACTGCTTAAGTTCAAGGCAGAAAATTTTTCTCAAGCTCCCTTTCCTGTATTTTTACCTTTTAACTTGTGGGTTTCGAATAAGCCATGAAGGCTACCTACCTAAGATTTAATATTTTACGAGTTACTTTCGTAACATAATGTAGCAGGGCATGGACACTTGCAAATATTAAAAAAAAAATGTTAAAACTCGAGGGTCTGGTATCTGTTTAGGGTTGAATACTTGCTAGTTACATATTTTCAAGCTGAGGCTCTTGAATCTAACGATCCTAAAAGTAGTTCAGAGGTTTTTCTTTTATGTTTCACTGGCATTCTGTGGTTAGCATTCAATTCTATTGGCATGATAACTAATATCATTTGCAACTTTTGCAGAAGTGCCCTGTGTTAAGCCTGTGTCTGCAGAGGACCAATCAAGTAAGATGTTCTCACGTTTCGTTTATTCACTTGTGTCATTTATCTTCTTTAAATGCTGAATGAATGTTCATAGACAGCCAATAATTCCTGATTCTAGGCTTTTGGATGCTGATCAAGTCAATAAACTTTCTTTTCCTCGTTCATTCTTCTAGGGTTTTTTATTGCATGTCCTTGTTTTTCTTTCATTTTCCTTACTGAAAGTTTGGTTTCTTTAGAAAAAAAAAAAAAAAGAAAAGAAAAAGAAAAAGAAAAAAAACTTCCACTATTCCTACTCACTGATAGTTTTTATTCTTTTTGTATGCAGTTGCTCCTAATGGATCACCTGTAGATAGGCCAGTATTTGTTGGAGACCAGAATGAAGTACTAGAAAAGACGCAGCTAGAGGCTATTGGTACGATTCCTAACTCCTGCTTTTATTACCTCAATTTATTCATGGGATCATTTGGCCGCAAAAAGCACTAGACATGCCTTCCTAATTCCTTACAAGAATGATCAAAAAAACTCACGATGATTATGGTAGACAAATATCTTCGATTATCAAAGTGAGAAATGTTGGAAGATTAGATCAAATGAAAAAAAATCTAGAATATGGCCCAATGGAACTGGTTAATACATAATAACTTTGACTAAGAATCTCATCCTTACATATTGTTGAACTAAAAAAAAAAAAAAAAAACTATAATATGGTTACCTTCTAAAGACTGGTTGAACTGCTGGAACTTTGGACGGTAAAATATTATTTGAAAAGTGGGTTTAGGTTTAAAGTTTGAAAGTGGACAATTTTTATGTCAACCAGAACCTAGGCAGGGTAACTATGTTTATCACATTTTTATTTATGCGTCAAGAACTTCGTTGCTAGTTGTTGTGAGGACCATTAGTGAACTTATAATCTGCGTTTTCCCCAATTCTTATATTCTCATGCATCTTCCTATACAGCTTCTTCCTCAGAAATACGCAATACTTTGAATGATGAAAAACTCCGTAGCCTCATCTGTGCCATTGATAGCTCACCAGATCCAGAAATTGTGAGTAGTCTGCATCTTCCATTTCAGGAGAAATTATACTCTTGAACAACTTTTTGCCCCACTATAGTTAAAAACGTTGGTTTAAGTTGGTTATTGCTCTTATTAGGAGCTTGATAAAGCTATGGAAGATGAAGCATTTCGCATACTAAGCAGCAAGGTACTATTTTCAGTCAAAGTGTTGTCAAATATTTATGTTCATCTGTGACTTATGATGCAGTCGTTATGAGCATGTCAGATAAATAGTTTCGTTTGCCTTGAGCATTTACTCTGTTTGTTAGATATCATCGATCATCGGCTCCTAGCCCAGGTGGTCACAGATGGAGGGGAAAAGTTGTCCAAGATATATATATGTAAGATCAATGGGACATTTCTGCCTCATTGCCTTGGGTGCTCGGCTCAGAAGATGCTGAAATCAAGGACATGGAAGCAACGGTTAACAGAATGAAGTATGCTGGGATTGACCATCCAAGAGCGTAGCTATGATATGTTTGATAGTGATAAATGTTCTAAGTTCAGCAGTGATATATAATTCTTTTTTTTTTTTTTTCTTTTTCTCTCCCGGCAGACTCCGTCTAATGATCTACCAGTGATACAACTCTACACGGGAAAATGCCACTTTGAGAGGATCAACCAAAGCTGTTTGTTAGTTATTAGTTTGTAGAACAACCAAACCAGTGGTACAACAATATATAATTGTCTTTCTGGACTTATTAGTTTGTAGAAAGACATGTTTTTGACAAAAGGATGGCAATGTTTTTTTTTCCTCTTTCCTTCTCC

mRNA sequence

TGGGAAGGGGAAGCCGCGCGCCAAACTCGCTTTTGCTTCGGCTGAGAACTTCACAATCTCTCCTTCCGTGTGTCTATAATTGTGGAGTGATCAAGTTGAAGTTGAAGTTGAAGTAGCAGCTCTAGCATTGGTTATTCTGCATTTAAGGTTTTAAGAAACTGAACATTCTATGGGTCCTCGGCAATGTCAGGTCTGCAATGAAGCACCATCCAAATATAAATGCCCCCTATGCCTTGTTCCTTACTGCTCTCTGGTTTGTTTCAAGAAACACAAAGAAGTGCCCTGTGTTAAGCCTGTGTCTGCAGAGGACCAATCAATTGCTCCTAATGGATCACCTGTAGATAGGCCAGTATTTGTTGGAGACCAGAATGAAGTACTAGAAAAGACGCAGCTAGAGGCTATTGCTTCTTCCTCAGAAATACGCAATACTTTGAATGATGAAAAACTCCGTAGCCTCATCTGTGCCATTGATAGCTCACCAGATCCAGAAATTGAGCTTGATAAAGCTATGGAAGATGAAGCATTTCGCATACTAAGCAGCAAGATATCATCGATCATCGGCTCCTAGCCCAGGTGGTCACAGATGGAGGGGAAAAGTTGTCCAAGATATATATATGTAAGATCAATGGGACATTTCTGCCTCATTGCCTTGGGTGCTCGGCTCAGAAGATGCTGAAATCAAGGACATGGAAGCAACGGTTAACAGAATGAAGTATGCTGGGATTGACCATCCAAGAGCGTAGCTATGATATGTTTGATAGTGATAAATGTTCTAAGTTCAGCAGTGATATATAATTCTTTTTTTTTTTTTTTCTTTTTCTCTCCCGGCAGACTCCGTCTAATGATCTACCAGTGATACAACTCTACACGGGAAAATGCCACTTTGAGAGGATCAACCAAAGCTGTTTGTTAGTTATTAGTTTGTAGAACAACCAAACCAGTGGTACAACAATATATAATTGTCTTTCTGGACTTATTAGTTTGTAGAAAGACATGTTTTTGACAAAAGGATGGCAATGTTTTTTTTTCCTCTTTCCTTCTCC

Coding sequence (CDS)

ATGGGTCCTCGGCAATGTCAGGTCTGCAATGAAGCACCATCCAAATATAAATGCCCCCTATGCCTTGTTCCTTACTGCTCTCTGGTTTGTTTCAAGAAACACAAAGAAGTGCCCTGTGTTAAGCCTGTGTCTGCAGAGGACCAATCAATTGCTCCTAATGGATCACCTGTAGATAGGCCAGTATTTGTTGGAGACCAGAATGAAGTACTAGAAAAGACGCAGCTAGAGGCTATTGCTTCTTCCTCAGAAATACGCAATACTTTGAATGATGAAAAACTCCGTAGCCTCATCTGTGCCATTGATAGCTCACCAGATCCAGAAATTGAGCTTGATAAAGCTATGGAAGATGAAGCATTTCGCATACTAAGCAGCAAGATATCATCGATCATCGGCTCCTAG

Protein sequence

MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSPVDRPVFVGDQNEVLEKTQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFRILSSKISSIIGS
Homology
[Close]
BLAST of CmaCh02G017020 vs. Swiss-Prot
Match: ZNHI3_HUMAN (Zinc finger HIT domain-containing protein 3 OS=Homo sapiens GN=ZNHIT3 PE=1 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 4.8e-08
Identity = 39/127 (30.71%), Postives = 64/127 (50.39%), Query Frame = 1 

Query: 6   CQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEV--PCVKPVSAEDQSIAPNGS--PVDRP- 65
           C +C E P KY+CP C VPYCS+VCF+KHKE   P  +PV  + +S  P  +  PV+   
Sbjct: 11  CVICLEKP-KYRCPACRVPYCSVVCFRKHKEQCNPETRPVEKKIRSALPTKTVKPVENKD 70

Query: 66  --------VFVGDQNEVLEKTQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDK 120
                   +   ++ + +    L+ +  S+ +R+ L +  LR L+  +D   D    +  
Sbjct: 71  DDDSIADFLNSDEEEDRVSLQNLKNLGESATLRSLLLNPHLRQLMVNLDQGEDKAKLMRA 130

[Close]
BLAST of CmaCh02G017020 vs. Swiss-Prot
Match: ZNHI3_MACMU (Zinc finger HIT domain-containing protein 3 (Fragment) OS=Macaca mulatta GN=ZNHIT3 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07
Identity = 38/127 (29.92%), Postives = 62/127 (48.82%), Query Frame = 1 

Query: 6   CQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEV--PCVKPVSAEDQSIAP--NGSPVDRP- 65
           C +C E P KY+CP C VPYCS+ CF+KHKE   P  +PV  + +S  P     PV+   
Sbjct: 3   CVICLEKP-KYRCPACRVPYCSVACFRKHKEQCNPEARPVEKKIRSALPTKTXKPVENKD 62

Query: 66  --------VFVGDQNEVLEKTQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDK 120
                   +   ++ + +    L+ +  S+ +R+ L +  LR L+  +D   D    +  
Sbjct: 63  DDDSIADFLNSDEEEDRVSLQNLKNLGKSATLRSLLLNPHLRQLMVNLDQGEDKAKLMRA 122

[Close]
BLAST of CmaCh02G017020 vs. Swiss-Prot
Match: ZNHI3_MOUSE (Zinc finger HIT domain-containing protein 3 OS=Mus musculus GN=Znhit3 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.5e-06
Identity = 38/125 (30.40%), Postives = 61/125 (48.80%), Query Frame = 1 

Query: 6   CQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEV------PCVK-----PVSAEDQSIAPNG 65
           C VC E P KY+CP C VPYCS+ CF+KHKE       P  K     PV +E+     + 
Sbjct: 11  CVVCLEKP-KYRCPTCRVPYCSVPCFQKHKEQCSSEARPVEKRRAGPPVRSEESK--DDD 70

Query: 66  SPVDRPVFVGDQNEVLEKTQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDKAM 120
           S V   +   ++ + +    L+ +  S  +R+ L +  LR L+ ++D   +    +   M
Sbjct: 71  SSVADFLNSDEEEDRVSLQNLKNLGESETLRSLLLNPHLRQLMISLDQGDNKAKLMRACM 130

[Close]
BLAST of CmaCh02G017020 vs. Swiss-Prot
Match: ZNHI3_BOVIN (Zinc finger HIT domain-containing protein 3 OS=Bos taurus GN=ZNHIT3 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 5.8e-06
Identity = 23/37 (62.16%), Postives = 25/37 (67.57%), Query Frame = 1 

Query: 2  GPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVP 39
          G   C VC E P KY+CP C VPYCSL CF+KHK  P
Sbjct: 7  GTAVCVVCLEKP-KYRCPACRVPYCSLPCFRKHKAPP 42

[Close]
BLAST of CmaCh02G017020 vs. Swiss-Prot
Match: ZNHI3_PANTR (Zinc finger HIT domain-containing protein 3 (Fragment) OS=Pan troglodytes GN=ZNHIT3 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 7.6e-06
Identity = 34/118 (28.81%), Postives = 58/118 (49.15%), Query Frame = 1 

Query: 15  KYKCPLCLVPYCSLVCFKKHKEV--PCVKPVSAEDQSIAPNGS--PVDRP---------V 74
           KY+CP C VPYCS+ CF+KHKE   P  +PV  + +S  P  +  PV+           +
Sbjct: 5   KYRCPACRVPYCSVACFRKHKEQCNPETRPVEKKIRSALPTKTVKPVENKDDDDSIADFL 64

Query: 75  FVGDQNEVLEKTQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAF 120
              ++ + +    L+ +  S+ +R+ L +  LR L+  +D   D    +   M++  F
Sbjct: 65  NSDEEEDRVSLQNLKNLGESATLRSLLLNPHLRQLMVNLDQGEDKAKLMRAYMQEPLF 122

[Close]
BLAST of CmaCh02G017020 vs. TrEMBL
Match: A0A0A0KDK5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G403610 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 5.8e-53
Identity = 109/133 (81.95%), Postives = 116/133 (87.22%), Query Frame = 1 

Query: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPC-VKPVSAEDQSIAPNGSPVDR 60
           M PR+CQVCNEAPSKYKCPLCL PYCSLVCFKKHKEVPC +KPVS  DQS A NG+ VDR
Sbjct: 1   MAPRKCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCAIKPVSEGDQSTACNGTFVDR 60

Query: 61  PVFVGDQNEVLEKTQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAF 120
           P+ VGDQNEVLEK+QLEAIASSSEI N LNDEKL+  I AIDSSPDPE E+DKAMEDEAF
Sbjct: 61  PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLQKFILAIDSSPDPETEVDKAMEDEAF 120

Query: 121 RILSSKISSIIGS 133
           RI SSKISSII S
Sbjct: 121 RIFSSKISSIINS 133

[Close]
BLAST of CmaCh02G017020 vs. TrEMBL
Match: C6T4W0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G042900 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 9.6e-40
Identity = 85/130 (65.38%), Postives = 103/130 (79.23%), Query Frame = 1 

Query: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSPVDRP 60
           MGPRQCQVCNEA SKYKCP C +PYCSLVCFKKHKE+PCVKP  +E ++ A + S  ++P
Sbjct: 1   MGPRQCQVCNEAQSKYKCPSCYLPYCSLVCFKKHKELPCVKPQPSEAKTTAVSESIAEKP 60

Query: 61  VFVGDQNEVLEKTQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFR 120
           + V + +EVLEK QLEAIASSSEIR+ LND+ L+ LIC ID S + E ELDKAM +EAFR
Sbjct: 61  LVVDESSEVLEKFQLEAIASSSEIRDALNDKALQELICRIDCSSNAENELDKAMAEEAFR 120

Query: 121 ILSSKISSII 131
           +L+ KI S I
Sbjct: 121 LLTDKILSTI 130

[Close]
BLAST of CmaCh02G017020 vs. TrEMBL
Match: A0A0B2PEI8_GLYSO (Zinc finger HIT domain-containing protein 3 OS=Glycine soja GN=glysoja_026497 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.6e-39
Identity = 84/132 (63.64%), Postives = 103/132 (78.03%), Query Frame = 1 

Query: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSPVDRP 60
           MGPRQCQVCNEA SKYKCP C +PYCSLVCFKKHKE+PCVKP  +E ++ A + S  ++P
Sbjct: 1   MGPRQCQVCNEAQSKYKCPSCYLPYCSLVCFKKHKELPCVKPQPSEAKTTAVSESIAEKP 60

Query: 61  VFVGDQNEVLEKTQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFR 120
           + V + +EVLEK QLEAIASSSEIR+ LND+ L+ LIC ID S + E ELDKAM +EAFR
Sbjct: 61  LVVDESSEVLEKFQLEAIASSSEIRDALNDKALQELICRIDCSSNAENELDKAMAEEAFR 120

Query: 121 ILSSKISSIIGS 133
           +L+ K+   I S
Sbjct: 121 LLTDKVMLYIAS 132

[Close]
BLAST of CmaCh02G017020 vs. TrEMBL
Match: K7LZG3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G130200 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.4e-38
Identity = 82/130 (63.08%), Postives = 100/130 (76.92%), Query Frame = 1 

Query: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSPVDRP 60
           MGPRQCQVCN+  SKYKCP C +PYCSLVCFKKHKE PCVKP  +E ++ A + S V++P
Sbjct: 1   MGPRQCQVCNQTQSKYKCPSCYLPYCSLVCFKKHKESPCVKPQPSETKATAVSESFVEKP 60

Query: 61  VFVGDQNEVLEKTQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFR 120
           +   + +EVL+K QLEAIASSSEIR+ LNDE L+ LIC ID S + E ELDKAM +EAFR
Sbjct: 61  LVADESSEVLQKFQLEAIASSSEIRDALNDEALQELICRIDGSSNAENELDKAMAEEAFR 120

Query: 121 ILSSKISSII 131
           + + KI S I
Sbjct: 121 LFTDKILSTI 130

[Close]
BLAST of CmaCh02G017020 vs. TrEMBL
Match: A0A0B2SVU6_GLYSO (Zinc finger HIT domain-containing protein 3 OS=Glycine soja GN=glysoja_025352 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 9.9e-37
Identity = 79/132 (59.85%), Postives = 98/132 (74.24%), Query Frame = 1 

Query: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSPVDRP 60
           MGPRQCQVCN+A SKYKCP C +PYCSLVCFKKHKE PCVKP  +E ++ A + S V++P
Sbjct: 1   MGPRQCQVCNQAQSKYKCPSCYLPYCSLVCFKKHKESPCVKPQPSETKATAVSESFVEKP 60

Query: 61  VFVGDQNEVLEKTQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFR 120
               + +EVL+  QLEAIASSSEIR+ LNDE L+ LIC ID S + E ELDKAM +EAF 
Sbjct: 61  FVADESSEVLQNFQLEAIASSSEIRDALNDEALQELICRIDGSSNAENELDKAMAEEAFC 120

Query: 121 ILSSKISSIIGS 133
           + + K+   + S
Sbjct: 121 LFTDKVMLYVAS 132

[Close]
BLAST of CmaCh02G017020 vs. TAIR10
Match: AT4G28820.1 (AT4G28820.1 HIT-type Zinc finger family protein)

HSP 1 Score: 121.7 bits (304), Expect = 3.4e-28
Identity = 72/158 (45.57%), Postives = 84/158 (53.16%), Query Frame = 1 

Query: 6   CQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSP--------- 65
           C++C +  SKYKCP CLVPYCSL CFK HKE PC KP         P  SP         
Sbjct: 9   CEICEKVVSKYKCPSCLVPYCSLGCFKIHKETPCAKPSDPSSTEEKPAASPAKEVPVKRP 68

Query: 66  ------------------------VDRPVFVGDQNEVLEKTQLEAIASSSEIRNTLNDEK 125
                                   V RP+ V ++  +LEKTQ EAIASSSEIR  L DE 
Sbjct: 69  EEANDVVEKTQQKASAASPAKEIPVARPIIVEEEKYILEKTQFEAIASSSEIREALKDEP 128

Query: 126 LRSLICAIDSSPDPEIELDKAMEDEAFRILSSKISSII 131
           L+ LI +IDSS +P  ELD+AM  EAFR  + KI S I
Sbjct: 129 LQKLIYSIDSSSNPLQELDEAMGIEAFREFTDKILSNI 166

[Close]
BLAST of CmaCh02G017020 vs. NCBI nr
Match: gi|659129664|ref|XP_008464779.1| (PREDICTED: zinc finger HIT domain-containing protein 3 isoform X1 [Cucumis melo])

HSP 1 Score: 221.9 bits (564), Expect = 6.8e-55
Identity = 113/133 (84.96%), Postives = 117/133 (87.97%), Query Frame = 1 

Query: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPC-VKPVSAEDQSIAPNGSPVDR 60
           M PR+CQVCNEAPSKYKCPLCL PYCSLVCFKKHKEVPC +KPVS EDQS APNGS VDR
Sbjct: 1   MAPRECQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCAIKPVSEEDQSTAPNGSFVDR 60

Query: 61  PVFVGDQNEVLEKTQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAF 120
           P+ VGDQNEVLEK+QLEAIASSSEI N LNDEKLR  I AIDSS DPE ELDKAMEDEAF
Sbjct: 61  PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETELDKAMEDEAF 120

Query: 121 RILSSKISSIIGS 133
           RI SSKISSII S
Sbjct: 121 RIFSSKISSIISS 133

[Close]
BLAST of CmaCh02G017020 vs. NCBI nr
Match: gi|449458039|ref|XP_004146755.1| (PREDICTED: zinc finger HIT domain-containing protein 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 214.9 bits (546), Expect = 8.3e-53
Identity = 109/133 (81.95%), Postives = 116/133 (87.22%), Query Frame = 1 

Query: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPC-VKPVSAEDQSIAPNGSPVDR 60
           M PR+CQVCNEAPSKYKCPLCL PYCSLVCFKKHKEVPC +KPVS  DQS A NG+ VDR
Sbjct: 1   MAPRKCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCAIKPVSEGDQSTACNGTFVDR 60

Query: 61  PVFVGDQNEVLEKTQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAF 120
           P+ VGDQNEVLEK+QLEAIASSSEI N LNDEKL+  I AIDSSPDPE E+DKAMEDEAF
Sbjct: 61  PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLQKFILAIDSSPDPETEVDKAMEDEAF 120

Query: 121 RILSSKISSIIGS 133
           RI SSKISSII S
Sbjct: 121 RIFSSKISSIINS 133

[Close]
BLAST of CmaCh02G017020 vs. NCBI nr
Match: gi|351721106|ref|NP_001238734.1| (uncharacterized protein LOC100527614 [Glycine max])

HSP 1 Score: 171.0 bits (432), Expect = 1.4e-39
Identity = 85/130 (65.38%), Postives = 103/130 (79.23%), Query Frame = 1 

Query: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSPVDRP 60
           MGPRQCQVCNEA SKYKCP C +PYCSLVCFKKHKE+PCVKP  +E ++ A + S  ++P
Sbjct: 1   MGPRQCQVCNEAQSKYKCPSCYLPYCSLVCFKKHKELPCVKPQPSEAKTTAVSESIAEKP 60

Query: 61  VFVGDQNEVLEKTQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFR 120
           + V + +EVLEK QLEAIASSSEIR+ LND+ L+ LIC ID S + E ELDKAM +EAFR
Sbjct: 61  LVVDESSEVLEKFQLEAIASSSEIRDALNDKALQELICRIDCSSNAENELDKAMAEEAFR 120

Query: 121 ILSSKISSII 131
           +L+ KI S I
Sbjct: 121 LLTDKILSTI 130

[Close]
BLAST of CmaCh02G017020 vs. NCBI nr
Match: gi|734328074|gb|KHN05909.1| (Zinc finger HIT domain-containing protein 3 [Glycine soja])

HSP 1 Score: 170.2 bits (430), Expect = 2.3e-39
Identity = 84/132 (63.64%), Postives = 103/132 (78.03%), Query Frame = 1 

Query: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSPVDRP 60
           MGPRQCQVCNEA SKYKCP C +PYCSLVCFKKHKE+PCVKP  +E ++ A + S  ++P
Sbjct: 1   MGPRQCQVCNEAQSKYKCPSCYLPYCSLVCFKKHKELPCVKPQPSEAKTTAVSESIAEKP 60

Query: 61  VFVGDQNEVLEKTQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFR 120
           + V + +EVLEK QLEAIASSSEIR+ LND+ L+ LIC ID S + E ELDKAM +EAFR
Sbjct: 61  LVVDESSEVLEKFQLEAIASSSEIRDALNDKALQELICRIDCSSNAENELDKAMAEEAFR 120

Query: 121 ILSSKISSIIGS 133
           +L+ K+   I S
Sbjct: 121 LLTDKVMLYIAS 132

[Close]
BLAST of CmaCh02G017020 vs. NCBI nr
Match: gi|1009132492|ref|XP_015883402.1| (PREDICTED: zinc finger HIT domain-containing protein 3 [Ziziphus jujuba])

HSP 1 Score: 167.9 bits (424), Expect = 1.2e-38
Identity = 83/130 (63.85%), Postives = 100/130 (76.92%), Query Frame = 1 

Query: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSPVDRP 60
           MGPRQCQVCN+A SKYKCP CL PYCSL CFKKHKE+PC KP+S+E +    + S + RP
Sbjct: 1   MGPRQCQVCNDAVSKYKCPSCLAPYCSLTCFKKHKEIPCSKPLSSEPKLATGSESLIGRP 60

Query: 61  VFVGDQNEVLEKTQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFR 120
           + V   +EVL+++QLEAIA+SSEIRN L DE L+ LI  ID SPD E ELDKAM+ E+FR
Sbjct: 61  LSVHKPSEVLQRSQLEAIATSSEIRNALKDENLQKLISKIDCSPDAENELDKAMDSESFR 120

Query: 121 ILSSKISSII 131
           IL+ KI S I
Sbjct: 121 ILTDKILSTI 130

The following BLAST results are available for this feature:
BLAST of CmaCh02G017020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZNHI3_HUMAN4.8e-0830.71Zinc finger HIT domain-containing protein 3 OS=Homo sapiens GN=ZNHIT3 PE=1 SV=2[more]
ZNHI3_MACMU1.4e-0729.92Zinc finger HIT domain-containing protein 3 (Fragment) OS=Macaca mulatta GN=ZNHI... [more]
ZNHI3_MOUSE4.5e-0630.40Zinc finger HIT domain-containing protein 3 OS=Mus musculus GN=Znhit3 PE=1 SV=1[more]
ZNHI3_BOVIN5.8e-0662.16Zinc finger HIT domain-containing protein 3 OS=Bos taurus GN=ZNHIT3 PE=2 SV=1[more]
ZNHI3_PANTR7.6e-0628.81Zinc finger HIT domain-containing protein 3 (Fragment) OS=Pan troglodytes GN=ZNH... [more]
BLAST of CmaCh02G017020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDK5_CUCSA5.8e-5381.95Uncharacterized protein OS=Cucumis sativus GN=Csa_6G403610 PE=4 SV=1[more]
C6T4W0_SOYBN9.6e-4065.38Uncharacterized protein OS=Glycine max GN=GLYMA_10G042900 PE=2 SV=1[more]
A0A0B2PEI8_GLYSO1.6e-3963.64Zinc finger HIT domain-containing protein 3 OS=Glycine soja GN=glysoja_026497 PE... [more]
K7LZG3_SOYBN2.4e-3863.08Uncharacterized protein OS=Glycine max GN=GLYMA_13G130200 PE=4 SV=1[more]
A0A0B2SVU6_GLYSO9.9e-3759.85Zinc finger HIT domain-containing protein 3 OS=Glycine soja GN=glysoja_025352 PE... [more]
BLAST of CmaCh02G017020 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G28820.13.4e-2845.57 HIT-type Zinc finger family protein[more]
BLAST of CmaCh02G017020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659129664|ref|XP_008464779.1|6.8e-5584.96PREDICTED: zinc finger HIT domain-containing protein 3 isoform X1 [Cucumis melo][more]
gi|449458039|ref|XP_004146755.1|8.3e-5381.95PREDICTED: zinc finger HIT domain-containing protein 3 isoform X1 [Cucumis sativ... [more]
gi|351721106|ref|NP_001238734.1|1.4e-3965.38uncharacterized protein LOC100527614 [Glycine max][more]
gi|734328074|gb|KHN05909.1|2.3e-3963.64Zinc finger HIT domain-containing protein 3 [Glycine soja][more]
gi|1009132492|ref|XP_015883402.1|1.2e-3863.85PREDICTED: zinc finger HIT domain-containing protein 3 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007529Znf_HIT
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G017020.1CmaCh02G017020.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007529Zinc finger, HIT-typePFAMPF04438zf-HITcoord: 5..32
score: 2.5
IPR007529Zinc finger, HIT-typePROFILEPS51083ZF_HITcoord: 6..39
score: 11
NoneNo IPR availablePANTHERPTHR13483UNCHARACTERIZEDcoord: 1..131
score: 4.0
NoneNo IPR availablePANTHERPTHR13483:SF8SUBFAMILY NOT NAMEDcoord: 1..131
score: 4.0
NoneNo IPR availableunknownSSF144232HIT/MYND zinc finger-likecoord: 4..37
score: 1.08

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh02G017020ClCG07G001620Watermelon (Charleston Gray)cmawcgB568
CmaCh02G017020Lsi05G010750Bottle gourd (USVL1VR-Ls)cmalsiB585
CmaCh02G017020Cp4.1LG05g00850Cucurbita pepo (Zucchini)cmacpeB647
CmaCh02G017020Cla97C07G129870Watermelon (97103) v2cmawmbB657
CmaCh02G017020Bhi05G000093Wax gourdcmawgoB0730
CmaCh02G017020Carg08922Silver-seed gourdcarcmaB1084
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh02G017020Cucumber (Chinese Long) v3cmacucB0698
CmaCh02G017020Cucumber (Chinese Long) v3cmacucB0709
CmaCh02G017020Cucumber (Chinese Long) v3cmacucB0716
CmaCh02G017020Cucumber (Chinese Long) v3cmacucB0773
CmaCh02G017020Watermelon (97103) v2cmawmbB648
CmaCh02G017020Watermelon (97103) v2cmawmbB653
CmaCh02G017020Wax gourdcmawgoB0716
CmaCh02G017020Cucurbita maxima (Rimu)cmacmaB265
CmaCh02G017020Cucurbita maxima (Rimu)cmacmaB365
CmaCh02G017020Cucurbita maxima (Rimu)cmacmaB450
CmaCh02G017020Cucurbita maxima (Rimu)cmacmaB502
CmaCh02G017020Cucurbita maxima (Rimu)cmacmaB511
CmaCh02G017020Cucumber (Gy14) v1cgycmaB0141
CmaCh02G017020Cucumber (Gy14) v1cgycmaB0393
CmaCh02G017020Cucumber (Gy14) v1cgycmaB0719
CmaCh02G017020Cucurbita moschata (Rifu)cmacmoB590
CmaCh02G017020Cucurbita moschata (Rifu)cmacmoB598
CmaCh02G017020Cucurbita moschata (Rifu)cmacmoB619
CmaCh02G017020Cucurbita moschata (Rifu)cmacmoB622
CmaCh02G017020Wild cucumber (PI 183967)cmacpiB591
CmaCh02G017020Wild cucumber (PI 183967)cmacpiB600
CmaCh02G017020Wild cucumber (PI 183967)cmacpiB606
CmaCh02G017020Cucumber (Chinese Long) v2cmacuB585
CmaCh02G017020Cucumber (Chinese Long) v2cmacuB600
CmaCh02G017020Cucumber (Chinese Long) v2cmacuB647
CmaCh02G017020Melon (DHL92) v3.5.1cmameB580
CmaCh02G017020Melon (DHL92) v3.5.1cmameB568
CmaCh02G017020Watermelon (Charleston Gray)cmawcgB565
CmaCh02G017020Watermelon (97103) v1cmawmB559
CmaCh02G017020Watermelon (97103) v1cmawmB565
CmaCh02G017020Watermelon (97103) v1cmawmB611
CmaCh02G017020Cucurbita pepo (Zucchini)cmacpeB600
CmaCh02G017020Cucurbita pepo (Zucchini)cmacpeB615
CmaCh02G017020Cucurbita pepo (Zucchini)cmacpeB631
CmaCh02G017020Cucurbita pepo (Zucchini)cmacpeB640
CmaCh02G017020Cucurbita pepo (Zucchini)cmacpeB650
CmaCh02G017020Bottle gourd (USVL1VR-Ls)cmalsiB571
CmaCh02G017020Bottle gourd (USVL1VR-Ls)cmalsiB586
CmaCh02G017020Cucumber (Gy14) v2cgybcmaB226
CmaCh02G017020Cucumber (Gy14) v2cgybcmaB391
CmaCh02G017020Cucumber (Gy14) v2cgybcmaB396
CmaCh02G017020Cucumber (Gy14) v2cgybcmaB962
CmaCh02G017020Melon (DHL92) v3.6.1cmamedB648
CmaCh02G017020Melon (DHL92) v3.6.1cmamedB657
CmaCh02G017020Melon (DHL92) v3.6.1cmamedB660
CmaCh02G017020Silver-seed gourdcarcmaB0093
CmaCh02G017020Silver-seed gourdcarcmaB0315
CmaCh02G017020Silver-seed gourdcarcmaB0328
CmaCh02G017020Silver-seed gourdcarcmaB1323
CmaCh02G017020Silver-seed gourdcarcmaB1492