Cp4.1LG05g00620 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG05g00620
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	RING/U-box superfamily protein, putative
Location	Cp4.1LG05 : 626376 .. 627515 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGTTACTTGAGGAGGGTCGTAGCCTCGCCGGCTATACACTTGATGACGTTTTGGCTAACAATAGATTTGGACCGCCGGCCTCTGCAACTGCAAGGGCTGCCGAAATCCGAGGCCGAACCCTACTCGACGTGATCCGCGACGAGGAGCCAAGCGCCGCCAAGGGGCTTTTCGGAAAGGACAAAAGGACATGGAAGTCTTTTAGGGAGAAACTCCGATTGAAGCGCGCCGGCTCTGCTTGGGTCTCCACAGTTCCGATTCCGACCTCCGATATGCCTTTTCAACCTAAGCGATCCCTAATGGGGAAGCGGAGTCAAGTCCGGTTCAACACGCCTTCGTCGCGAAACTCCACCGATCATTCCGCTCGTAATCCGTCTGAAGAATCCTCCAAATCCATTCGCCGTCAAGTATCTCGACAGAGTTCCACAATGAACAGCTCCAGCGATTCGACTCCGTTCCAATACGACGAGTCCTTTGATTATTCATCCATTCCGGATTCAGCGCCGAGTCGAATGAGGCCGCAAATGTCGCGTCACACCTCAATCCGGATCCCAAATCCAACGGAGAACTACACCGATCTAACTGAACCAGATCACGATAACCGAGTCCGACATATAAGCTCCGCCTTCTCGGAGCGGAGAATGATGTCCGCTAGAGAAACCGTAGCAGCACAAGAAGCAGCCGATGCAGCCGCCGCCGCCGCCGCAGCGGAAGCTGCAGAAGAAGAGGAAGAGAAAGAGAAAGAACAAAACGAAGACGAAAATGAAAACGTAGAATCAACAACAGGATCGGAGGAAGGGGAGAAGGAGTCACCTACGTCGGAGCCGGTAAGGATGTCGTTGATGGATCTGTTGCACGAGACGGACAGAGAAATGGGGTTCGAAGGGTCGAATTACGGAATGGGGTTCGAAGAAGATGGCTTCTCCGATGAGGAAGACGTTGCATACGAAGAAGAAGATGAAGACGATGGTAGTGGCGGAGAATTCAGCTGCTGCGTTTGCATGGTGAAGCATAAGAACGCGCCAATGGCGGCATGCGGCCATACATTTTGCAGGCTCTGTTCGAAGGAGCTTATGGTTAGCCGCGGGAACTGTCCCACTTGCAGCGATTTCATCTTGGAAATGCTCGAGGCTTTTTAA

mRNA sequence

ATGCCGTTACTTGAGGAGGGTCGTAGCCTCGCCGGCTATACACTTGATGACGTTTTGGCTAACAATAGATTTGGACCGCCGGCCTCTGCAACTGCAAGGGCTGCCGAAATCCGAGGCCGAACCCTACTCGACGTGATCCGCGACGAGGAGCCAAGCGCCGCCAAGGGGCTTTTCGGAAAGGACAAAAGGACATGGAAGTCTTTTAGGGAGAAACTCCGATTGAAGCGCGCCGGCTCTGCTTGGGTCTCCACAGTTCCGATTCCGACCTCCGATATGCCTTTTCAACCTAAGCGATCCCTAATGGGGAAGCGGAGTCAAGTCCGGTTCAACACGCCTTCGTCGCGAAACTCCACCGATCATTCCGCTCGTAATCCGTCTGAAGAATCCTCCAAATCCATTCGCCGTCAAGTATCTCGACAGAGTTCCACAATGAACAGCTCCAGCGATTCGACTCCGTTCCAATACGACGAGTCCTTTGATTATTCATCCATTCCGGATTCAGCGCCGAGTCGAATGAGGCCGCAAATGTCGCGTCACACCTCAATCCGGATCCCAAATCCAACGGAGAACTACACCGATCTAACTGAACCAGATCACGATAACCGAGTCCGACATATAAGCTCCGCCTTCTCGGAGCGGAGAATGATGTCCGCTAGAGAAACCGTAGCAGCACAAGAAGCAGCCGATGCAGCCGCCGCCGCCGCCGCAGCGGAAGCTGCAGAAGAAGAGGAAGAGAAAGAGAAAGAACAAAACGAAGACGAAAATGAAAACGTAGAATCAACAACAGGATCGGAGGAAGGGGAGAAGGAGTCACCTACGTCGGAGCCGGTAAGGATGTCGTTGATGGATCTGTTGCACGAGACGGACAGAGAAATGGGGTTCGAAGGGTCGAATTACGGAATGGGGTTCGAAGAAGATGGCTTCTCCGATGAGGAAGACGTTGCATACGAAGAAGAAGATGAAGACGATGGTAGTGGCGGAGAATTCAGCTGCTGCGTTTGCATGGTGAAGCATAAGAACGCGCCAATGGCGGCATGCGGCCATACATTTTGCAGGCTCTGTTCGAAGGAGCTTATGGTTAGCCGCGGGAACTGTCCCACTTGCAGCGATTTCATCTTGGAAATGCTCGAGGCTTTTTAA

Coding sequence (CDS)

ATGCCGTTACTTGAGGAGGGTCGTAGCCTCGCCGGCTATACACTTGATGACGTTTTGGCTAACAATAGATTTGGACCGCCGGCCTCTGCAACTGCAAGGGCTGCCGAAATCCGAGGCCGAACCCTACTCGACGTGATCCGCGACGAGGAGCCAAGCGCCGCCAAGGGGCTTTTCGGAAAGGACAAAAGGACATGGAAGTCTTTTAGGGAGAAACTCCGATTGAAGCGCGCCGGCTCTGCTTGGGTCTCCACAGTTCCGATTCCGACCTCCGATATGCCTTTTCAACCTAAGCGATCCCTAATGGGGAAGCGGAGTCAAGTCCGGTTCAACACGCCTTCGTCGCGAAACTCCACCGATCATTCCGCTCGTAATCCGTCTGAAGAATCCTCCAAATCCATTCGCCGTCAAGTATCTCGACAGAGTTCCACAATGAACAGCTCCAGCGATTCGACTCCGTTCCAATACGACGAGTCCTTTGATTATTCATCCATTCCGGATTCAGCGCCGAGTCGAATGAGGCCGCAAATGTCGCGTCACACCTCAATCCGGATCCCAAATCCAACGGAGAACTACACCGATCTAACTGAACCAGATCACGATAACCGAGTCCGACATATAAGCTCCGCCTTCTCGGAGCGGAGAATGATGTCCGCTAGAGAAACCGTAGCAGCACAAGAAGCAGCCGATGCAGCCGCCGCCGCCGCCGCAGCGGAAGCTGCAGAAGAAGAGGAAGAGAAAGAGAAAGAACAAAACGAAGACGAAAATGAAAACGTAGAATCAACAACAGGATCGGAGGAAGGGGAGAAGGAGTCACCTACGTCGGAGCCGGTAAGGATGTCGTTGATGGATCTGTTGCACGAGACGGACAGAGAAATGGGGTTCGAAGGGTCGAATTACGGAATGGGGTTCGAAGAAGATGGCTTCTCCGATGAGGAAGACGTTGCATACGAAGAAGAAGATGAAGACGATGGTAGTGGCGGAGAATTCAGCTGCTGCGTTTGCATGGTGAAGCATAAGAACGCGCCAATGGCGGCATGCGGCCATACATTTTGCAGGCTCTGTTCGAAGGAGCTTATGGTTAGCCGCGGGAACTGTCCCACTTGCAGCGATTTCATCTTGGAAATGCTCGAGGCTTTTTAA

Protein sequence

MPLLEEGRSLAGYTLDDVLANNRFGPPASATARAAEIRGRTLLDVIRDEEPSAAKGLFGKDKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDHSARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSRMRPQMSRHTSIRIPNPTENYTDLTEPDHDNRVRHISSAFSERRMMSARETVAAQEAADAAAAAAAAEAAEEEEEKEKEQNEDENENVESTTGSEEGEKESPTSEPVRMSLMDLLHETDREMGFEGSNYGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCRLCSKELMVSRGNCPTCSDFILEMLEAF

Homology

[Close]

BLAST of Cp4.1LG05g00620 vs. TrEMBL
Match: A0A0A0L944_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G628230 PE=4 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 9.8e-146
Identity = 292/387 (75.45%), Postives = 330/387 (85.27%), Query Frame = 1


Query: 1   MPLLEEGRSLAGYTLDDVLANNRFGPPASATARAAEIRGRTLLDVIRDEEPSAAKGLFGK 60
           M ++E+GRSLAGYTLDDVLANNR GPP  ATARA EIRGRTLLD+IRDEEPS  KGLFGK
Sbjct: 1   MSMVEDGRSLAGYTLDDVLANNRLGPP--ATARATEIRGRTLLDIIRDEEPSTGKGLFGK 60

Query: 61  DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH 120
           DKRTWKSFR+KLRLKRAGSAWVSTVPIPTSD+P   KRSLMG+R+QVRFNT SS+NS D+
Sbjct: 61  DKRTWKSFRDKLRLKRAGSAWVSTVPIPTSDIPVHNKRSLMGRRNQVRFNTGSSKNSPDN 120

Query: 121 SARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSR-MRPQMSRH 180
            +R+PSEE+SKS RRQ+ RQ+STMNSSSDS+ F YDES +YSS PD+AP R MRPQMSRH
Sbjct: 121 QSRHPSEETSKSTRRQMCRQTSTMNSSSDSSAFHYDESSEYSSSPDAAPVRIMRPQMSRH 180

Query: 181 TSIRIPNPTENYTDLTEPDHDNRVRHISSAFSERRMMSARETVAAQEAADAAAAAAAAEA 240
            S+R+ NP ENYTD TEPD DNR+RH++   SE RMMSARE VAAQEAADAA+AAAAA A
Sbjct: 181 NSVRVSNPMENYTDPTEPDRDNRIRHLN--LSEHRMMSAREAVAAQEAADAASAAAAAAA 240

Query: 241 AEEEEEKEKEQNE------DENENVESTTGSEEGEKE-SPTSEPVRMSLMDLLHETDREM 300
           A E  E+EK+QNE      +ENE  ESTT SEE E+E SP SEPVRMSLMDLLHETDREM
Sbjct: 241 AAEAAEEEKKQNENNNESGNENEEEESTTESEEEEEESSPASEPVRMSLMDLLHETDREM 300

Query: 301 GFEGSNYGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCR 360
           GFE S+YGMGFE +   ++ED  Y EEDEDDG+G EFSCCVCMVKHKN P+A+CGHTFCR
Sbjct: 301 GFERSSYGMGFEGNFLEEDEDDEY-EEDEDDGNGEEFSCCVCMVKHKNGPLASCGHTFCR 360

Query: 361 LCSKELMVSRGNCPTCSDFILEMLEAF 380
           LCSKELMVSRGNCPTCS+FILE+L+AF
Sbjct: 361 LCSKELMVSRGNCPTCSNFILEILDAF 382

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BLAST of Cp4.1LG05g00620 vs. TrEMBL
Match: A0A067JUA1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17536 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.1e-63
Identity = 187/402 (46.52%), Postives = 245/402 (60.95%), Query Frame = 1


Query: 1   MPLLEEGRSLAGYTLDDVLANNRFGPPASATARAAEIRGRTLLDVIRDEEPSAAKGLFG- 60
           M  LE  R LAG TLD VL   +   PA+A A       RTLLD+IRD+EP  +  LFG 
Sbjct: 1   MSALEGTRDLAGLTLDAVLGGEK--RPAAALAPTPAQMNRTLLDIIRDDEPHVS--LFGH 60

Query: 61  KDKRTWKSFREKLRLKRA-GSAWVSTVPIPTSDMPFQ-----------PKRSLMGKRSQV 120
           KDK+TWK+FRE+LRL+R+ GSAW S+VP+P SD+P Q             RS + +R+ V
Sbjct: 61  KDKKTWKAFRERLRLRRSGGSAWTSSVPVPASDIPIQNNNQSFSSNYPQPRSFIARRNSV 120

Query: 121 RFNTPSSRNST--DHSARNPSEESSKSIRRQVSRQSSTMNSSSDSTP---FQYDESFDYS 180
           RF   S  +ST  + S+ NP+    ++I   + R++S+    S  TP    + DES  + 
Sbjct: 121 RFTGSSPGDSTHAEDSSDNPAVSGHRAI---MCRRTSSRYGPSGLTPSESMRSDES-SFG 180

Query: 181 SIPDSAPSR-MRPQMSRHTSIRIPNPTENYTDLTEPDHDNRVRHISSAFSERRMMSARET 240
            + D  P R +R QMSRH SIR P+ ++ +    E +     R + +  +E R MSARE 
Sbjct: 181 ILGDEPPLRSLRAQMSRHNSIRNPDSSQFFD--AEEETGQSSRRLGAVITEDRAMSAREA 240

Query: 241 VAAQEAADAAAAAAAAEAAEEEEEKEKEQNEDENENVESTTGSEEGEKESPTSEPVRMSL 300
           VAAQEAA+A AAA AA  AEEEE  E+E++ED      ++ G+ E       + PVRMSL
Sbjct: 241 VAAQEAAEAEAAAQAAAEAEEEEYDEEEEDEDS----PTSAGAAE-------AAPVRMSL 300

Query: 301 MDLLHETDREMGFEGSNYGMGFEEDGFSDEEDVAYEEEDEDDGSGG----EFSCCVCMVK 360
           MDLL ETDR+MGF GS+Y MG   D +  EE+   EEED+DDG  G    E +CCVCMV+
Sbjct: 301 MDLLEETDRQMGFVGSSYTMG---DDYDCEEE---EEEDDDDGMDGGDGIEHTCCVCMVR 360

Query: 361 HKNAPMAACGHTFCRLCSKELMVSRGNCPTCSDFILEMLEAF 380
           HK A    CGHTFCRLCS+EL V RGNCP C+ +I E+L+ F
Sbjct: 361 HKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGYISEILDIF 375

[Close]

BLAST of Cp4.1LG05g00620 vs. TrEMBL
Match: B9S513_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1719530 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 3.9e-62
Identity = 181/402 (45.02%), Postives = 231/402 (57.46%), Query Frame = 1


Query: 10  LAGYTLDDVLANNRFGPPASATARAAEIRGRTLLDVIRDEEPSAAKGLFG-KDKRTWKSF 69
           LAG TLD VL + +  P  +ATA+      RTLLD+IRDEEP  +  LFG KDK++WK+F
Sbjct: 5   LAGLTLDAVLGDKQAQPTPTATAQM----NRTLLDIIRDEEPHGS--LFGHKDKKSWKAF 64

Query: 70  REKLRLKRAGSAWVSTVPIPTSDMP----------FQPKRSLMGKRSQVRFNTPSSRNST 129
           R++LRLKRAG+AW STVPIP SD+P          F   RSLM +R+ VRF T S   S 
Sbjct: 65  RDRLRLKRAGAAWTSTVPIPASDIPIYNANSTASNFNQSRSLMSRRNSVRFTTLS---SG 124

Query: 130 DHSARNPSEESSKSIRRQVSRQSSTMNSSSDSTPF-------QYDESF----DYSSIPDS 189
           DHS R   +++           +  ++ S  + PF       +Y  S     +  ++ D 
Sbjct: 125 DHSPRLEEDDNGYHNNDHPPAPAQAVSVSGSARPFMVRRVSSRYGSSLLPDENIHAVGDE 184

Query: 190 APSR-MRPQMSRHTSIR---IPNPTENYTDLTEPDHDNRVRHISSAFSERRMMSARETVA 249
             SR  RPQMSRH S R    P       ++         R + +A +E R +SARE VA
Sbjct: 185 PQSRSFRPQMSRHNSTRNGESPFTGGGEDEVAREGGGGSGRRLGAALAEERALSAREAVA 244

Query: 250 AQEAADA-AAAAAAAEAAEEEEEKEKEQNEDENENVESTTGSEEGEKESPTSEPVRMSLM 309
           AQEAA+A AAA AAAEAAEE+E                  G+  G +E   ++PVRMSLM
Sbjct: 245 AQEAAEAEAAAQAAAEAAEEDE------------------GNSPGAEE---AQPVRMSLM 304

Query: 310 DLLHETDREMGFEGSNYGMGFEEDGFSDEEDVAYEEEDEDD-----GSGGEFSCCVCMVK 369
           DLL ETDR+MGF GS Y +G       D+E+   E+EDEDD     G G E +CCVCMV+
Sbjct: 305 DLLEETDRQMGFVGSRYTIG------DDDEECEEEQEDEDDNGVDGGDGIEHTCCVCMVR 364

Query: 370 HKNAPMAACGHTFCRLCSKELMVSRGNCPTCSDFILEMLEAF 380
           HK A    CGHTFCRLCS+EL V RGNCP C+ FI+E+L+ F
Sbjct: 365 HKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFIVEILDIF 370

[Close]

BLAST of Cp4.1LG05g00620 vs. TrEMBL
Match: B9GQJ4_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0002s24530g PE=4 SV=2)

HSP 1 Score: 232.3 bits (591), Expect = 1.0e-57
Identity = 171/367 (46.59%), Postives = 210/367 (57.22%), Query Frame = 1


Query: 40  RTLLDVIRDEEPSAAKGLFG-KDKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPK- 99
           RTLLD+IRDEE  +   LFG KDK++WK+FR+KLRLKRAGSAW S+V  P SD+P   + 
Sbjct: 49  RTLLDIIRDEESGS---LFGHKDKKSWKAFRDKLRLKRAGSAWTSSVHTPASDIPIPVEN 108

Query: 100 ------------RSLMGKRSQVRFNTPSS------RNSTDHSARNPSEESSKSIRRQVSR 159
                       RSLM +R+ VRF T SS        S D+S   PS     + RR  +R
Sbjct: 109 RFRNSNINNASSRSLMTRRNSVRFTTVSSVISPELEESDDNSGMGPSSRPQMT-RRSSTR 168

Query: 160 QSSTMNSSSDSTPFQYDESFDYSSIPDSAPSR-MRPQMSRHTSIRIPNPTENYTDLTEPD 219
             S M      +    D      ++ D  PSR  RPQ+SRH S R P      +D  + D
Sbjct: 169 FGSAMLQVQSESTHSGDPDVSIHAVEDGPPSRGFRPQISRHNSTRFPVVDSTQSDENDLD 228

Query: 220 HDNR--VRHISSAFSERRMMSARETVAAQEAADAAAAAAAAEAAEEEEEKEKEQNEDENE 279
              R     + +A +E R++SARE VAAQEAA+AAA   AA  A  E E E        E
Sbjct: 229 PSAREGTTRLGTALAEERLLSAREAVAAQEAAEAAAQEEAAATAAAEHEAE--------E 288

Query: 280 NVESTTGSEEGEKESPTSEPVRMSLMDLLHETDREMGFEGSNYGMGFEEDGFSDEEDVAY 339
                 GS E      T EPVRMSLMDLL ETDR+MGFEGS Y +G + +   D++D   
Sbjct: 289 GAMPMPGSTE------TQEPVRMSLMDLLEETDRQMGFEGSRYTVG-DLEACDDDDDEDE 348

Query: 340 EEED---EDDGSGG-EFSCCVCMVKHKNAPMAACGHTFCRLCSKELMVSRGNCPTCSDFI 380
           EEED   E DG  G E++CCVCMV+HK A    CGHTFCRLCS+EL V RGNCP C+ FI
Sbjct: 349 EEEDGGEEGDGVAGIEYTCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFI 396

[Close]

BLAST of Cp4.1LG05g00620 vs. TrEMBL
Match: A0A067FRX5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017330mg PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 7.2e-56
Identity = 170/398 (42.71%), Postives = 224/398 (56.28%), Query Frame = 1


Query: 10  LAGYTLDDVLANNRFGPPASATARAAEIRGRTLLDVIRDEEPSAAKGLFGKDKRTWKSFR 69
           LAG TLD +L N R  PP +         GRTLLD+IRDE+P+  K    KD+++WK FR
Sbjct: 11  LAGLTLDAILTNKRPSPPPAPA-------GRTLLDIIRDEDPNG-KNFGHKDRKSWKLFR 70

Query: 70  EKLRLKRAGSAWVSTVPIPTSDMPFQPK-------RSLMGKRSQVRFNTPSSRNSTDHSA 129
           ++LRLKRAG+AW S+V IPTSD+P           RS + +RS VRF T  +        
Sbjct: 71  DRLRLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNPRSQLIRRSSVRFQTNPAGELASQL- 130

Query: 130 RNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSRM--RPQMSRHT 189
                E ++    Q +R+ S+  +SS   P Q     D S   + +P+R   +PQ+SRH 
Sbjct: 131 -----EDNRGAPPQFARRPSSKVASSSPGPTQSSHHED-SPEGEGSPTRSSRQPQLSRHN 190

Query: 190 SIRIPNPTENYTDLTEPDHDN----RVRHISSAFSERRMMSARETVAAQEAADAAAAAAA 249
           S R+   +   ++    D  +      R ++   ++ R +SARE VAAQEAA+A AAAA 
Sbjct: 191 STRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSAREAVAAQEAAEAEAAAAE 250

Query: 250 AEAAEEEEEKEKEQNEDENENVESTTGSEEGEKESPTSEPV-----RMSLMDLLHETDRE 309
           AEA  E E                   S + E E+  +EPV     RMSLMDLL ETDR+
Sbjct: 251 AEAEAEAE------------------ASVQVEAEAEAAEPVQPRQPRMSLMDLLEETDRQ 310

Query: 310 MGFEGSNYGMGFEEDGFSDEEDVA-------YEEEDED--DGSGG-EFSCCVCMVKHKNA 369
           MG EGS Y +G +ED   +EED A       YEEE +D  + +GG E +CCVCMV+HK A
Sbjct: 311 MGLEGSRYAVGEDED--EEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGA 370

Query: 370 PMAACGHTFCRLCSKELMVSRGNCPTCSDFILEMLEAF 380
               CGHTFCRLCS+EL V RGNCP C+ FILE+L+ F
Sbjct: 371 AFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373

[Close]

BLAST of Cp4.1LG05g00620 vs. TAIR10
Match: AT3G07120.1 (AT3G07120.1 RING/U-box superfamily protein)

HSP 1 Score: 210.7 bits (535), Expect = 1.6e-54
Identity = 165/389 (42.42%), Postives = 209/389 (53.73%), Query Frame = 1


Query: 3   LLEEGRSLAGYTLDDVLANNRF-------GPPASATARAAEIR--GRTLLDVIRDEEPSA 62
           L     SLAG +LD VL             PP   +      R   +TL D+IR+E    
Sbjct: 4   LKSRSNSLAGLSLDAVLGGEILIEPPSLPSPPPLPSKSLVPHRPTSQTLFDIIREEYAKE 63

Query: 63  AKGLFGKDKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPF-QPKRSLMGKRSQVRFNTP 122
                 KD+ TW+ FREKLRLKR GSAW S++ IP SD+    PK      RS       
Sbjct: 64  GH----KDRTTWQIFREKLRLKRTGSAWTSSLHIPASDILIPNPKHIGTAFRSH-----S 123

Query: 123 SSRNSTDHSARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSR- 182
           +  N  D     P  +   S  R +  + S+M   S   P   D+S D S + D  PSR 
Sbjct: 124 AGLNIRDLVHAIPMSDPPGSSGRAMFTRGSSMRVGSSKNP---DDSPDISVLEDGPPSRS 183

Query: 183 MRPQMSRHTSIRIPNPTENYTDLTEPDHDNRVRHISSAFSERRMMSARETVAAQEAADAA 242
            +PQ+SRH S+R         D +E + +NR RH    F E R MSARE VAAQEAA+A 
Sbjct: 184 FKPQLSRHDSVR---------DHSEGEENNRRRHPIVTFVEERQMSAREAVAAQEAAEAE 243

Query: 243 AAAAAAEAAEEEEEKEKEQNEDENENVESTTGSEEGEKESPTSEPVRMSLMDLLHETDRE 302
           AAAA    +E+E++ ++E +  E E ++S++ SE  +          MSLMDLL ETDR+
Sbjct: 244 AAAAG--GSEDEDDDDEEDDSGETEEMKSSSASEPKQ---------TMSLMDLLEETDRQ 303

Query: 303 MGFEGSNYGMGFEEDGFSDEEDVAYEEEDEDDGSG-GEFSCCVCMVKHKNAPMAACGHTF 362
           MG  GS Y M  +E+   DEED   EEE +  G G GE SCCVCMVK K A    CGHTF
Sbjct: 304 MGLTGSRYAMDEDEEYEEDEEDENNEEEGDSHGGGEGELSCCVCMVKIKGASFTPCGHTF 360

Query: 363 CRLCSKELMVSRGNCPTCSDFILEMLEAF 380
           C+LCSKELM  +G+CP CS F+LE LE F
Sbjct: 364 CKLCSKELMAQKGHCPVCSSFVLEFLEIF 360

[Close]

BLAST of Cp4.1LG05g00620 vs. TAIR10
Match: AT3G25030.1 (AT3G25030.1 RING/U-box superfamily protein)

HSP 1 Score: 95.5 bits (236), Expect = 7.4e-20
Identity = 54/115 (46.96%), Postives = 67/115 (58.26%), Query Frame = 1


Query: 268 EKESPTS---EPVRMSLMDLLHETDREMGFEGSNYGMGFEEDGFSDEEDVAYEEEDEDDG 327
           E+E+P     EP RMSLM+LL E + +M F           DG ++EE  A         
Sbjct: 152 EEETPAEREVEPARMSLMELLEENEGQMSF--------VSVDGEAEEEVAAV-------- 211

Query: 328 SGGEFSCCVCMVKHKNAPMAACGHTFCRLCSKELMVSRGNCPTCSDFILEMLEAF 380
           +  E SCCVCMV+ K A    CGHTFCRLCS+EL V RGNCP C+  ILE+L+ F
Sbjct: 212 TAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250

[Close]

BLAST of Cp4.1LG05g00620 vs. TAIR10
Match: AT4G13100.2 (AT4G13100.2 RING/U-box superfamily protein)

HSP 1 Score: 75.9 bits (185), Expect = 6.1e-14
Identity = 55/146 (37.67%), Postives = 71/146 (48.63%), Query Frame = 1


Query: 242 EEEEKEKEQNEDENENVESTTGSEEGEKESPTSEPVRMSLMDLLHETDREMGFEGSNYGM 301
           E     ++ ++   E  E       G   +   EP RMSLM+LL + D  M +E      
Sbjct: 133 ETNRSSRDVSDAAEEAAEREGRLRLGTVLAAEREPPRMSLMELLEDNDGHM-YE------ 192

Query: 302 GFEEDGFSDEEDVAYEEEDEDDGSG--------GEFSCCVCMVKHKNAPMAACGHTFCRL 361
                  S  ++V  E  D  DG G         E  CCVCMV+ K A    CGHTFCRL
Sbjct: 193 ------LSARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCRL 252

Query: 362 CSKELMVSRGNCPTCSDFILEMLEAF 380
           CS+EL V RGNCP C+  IL++L+ F
Sbjct: 253 CSRELWVQRGNCPLCNTAILQVLDIF 265

[Close]

BLAST of Cp4.1LG05g00620 vs. TAIR10
Match: AT4G22250.1 (AT4G22250.1 RING/U-box superfamily protein)

HSP 1 Score: 68.9 bits (167), Expect = 7.5e-12
Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 1


Query: 276 PVRMSLMDLLHETDREMGFEGSNYGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCM 335
           P R+SLM LL ET  ++           ++DG   E   A         +G +  CCVCM
Sbjct: 125 PRRVSLMRLLEETAEKI----------VDDDGKETEILTA----SIGTLTGNDSVCCVCM 184

Query: 336 VKHKNAPMAACGHTFCRLCSKELMVSRGNCPTCSDFILEMLEAF 380
            + K A    CGHTFCR+CS+EL ++RG+CP C+  I+E+L+ F
Sbjct: 185 GRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214

[Close]

BLAST of Cp4.1LG05g00620 vs. TAIR10
Match: AT4G03965.1 (AT4G03965.1 RING/U-box superfamily protein)

HSP 1 Score: 67.8 bits (164), Expect = 1.7e-11
Identity = 39/114 (34.21%), Postives = 60/114 (52.63%), Query Frame = 1


Query: 266 EGEKESPTSEPVRMSLMDLLHETDREMGFEGSNYGMGFEEDGFSDEEDVAYEEEDEDDGS 325
           E  + S +  P+++SLM LL ET   +  E +            + E V         G 
Sbjct: 108 EETEASGSLTPLKVSLMRLLEETAERVVVEEN------------ETERVTASASSTVRGV 167

Query: 326 GGEFSCCVCMVKHKNAPMAACGHTFCRLCSKELMVSRGNCPTCSDFILEMLEAF 380
             +  CCVCM + K A    CGHTFCR+CS+E+ ++RG+CP C+  I+E+L+ +
Sbjct: 168 NNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREVWLNRGSCPLCNRPIIEILDIY 209

[Close]

BLAST of Cp4.1LG05g00620 vs. NCBI nr
Match: gi|778682138|ref|XP_011651651.1| (PREDICTED: protein FAM9A [Cucumis sativus])

HSP 1 Score: 524.6 bits (1350), Expect = 1.4e-145
Identity = 292/387 (75.45%), Postives = 330/387 (85.27%), Query Frame = 1


Query: 1   MPLLEEGRSLAGYTLDDVLANNRFGPPASATARAAEIRGRTLLDVIRDEEPSAAKGLFGK 60
           M ++E+GRSLAGYTLDDVLANNR GPP  ATARA EIRGRTLLD+IRDEEPS  KGLFGK
Sbjct: 1   MSMVEDGRSLAGYTLDDVLANNRLGPP--ATARATEIRGRTLLDIIRDEEPSTGKGLFGK 60

Query: 61  DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH 120
           DKRTWKSFR+KLRLKRAGSAWVSTVPIPTSD+P   KRSLMG+R+QVRFNT SS+NS D+
Sbjct: 61  DKRTWKSFRDKLRLKRAGSAWVSTVPIPTSDIPVHNKRSLMGRRNQVRFNTGSSKNSPDN 120

Query: 121 SARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSR-MRPQMSRH 180
            +R+PSEE+SKS RRQ+ RQ+STMNSSSDS+ F YDES +YSS PD+AP R MRPQMSRH
Sbjct: 121 QSRHPSEETSKSTRRQMCRQTSTMNSSSDSSAFHYDESSEYSSSPDAAPVRIMRPQMSRH 180

Query: 181 TSIRIPNPTENYTDLTEPDHDNRVRHISSAFSERRMMSARETVAAQEAADAAAAAAAAEA 240
            S+R+ NP ENYTD TEPD DNR+RH++   SE RMMSARE VAAQEAADAA+AAAAA A
Sbjct: 181 NSVRVSNPMENYTDPTEPDRDNRIRHLN--LSEHRMMSAREAVAAQEAADAASAAAAAAA 240

Query: 241 AEEEEEKEKEQNE------DENENVESTTGSEEGEKE-SPTSEPVRMSLMDLLHETDREM 300
           A E  E+EK+QNE      +ENE  ESTT SEE E+E SP SEPVRMSLMDLLHETDREM
Sbjct: 241 AAEAAEEEKKQNENNNESGNENEEEESTTESEEEEEESSPASEPVRMSLMDLLHETDREM 300

Query: 301 GFEGSNYGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCR 360
           GFE S+YGMGFE +   ++ED  Y EEDEDDG+G EFSCCVCMVKHKN P+A+CGHTFCR
Sbjct: 301 GFERSSYGMGFEGNFLEEDEDDEY-EEDEDDGNGEEFSCCVCMVKHKNGPLASCGHTFCR 360

Query: 361 LCSKELMVSRGNCPTCSDFILEMLEAF 380
           LCSKELMVSRGNCPTCS+FILE+L+AF
Sbjct: 361 LCSKELMVSRGNCPTCSNFILEILDAF 382

[Close]

BLAST of Cp4.1LG05g00620 vs. NCBI nr
Match: gi|659131007|ref|XP_008465469.1| (PREDICTED: uncharacterized serine-rich protein C1E8.05-like [Cucumis melo])

HSP 1 Score: 343.6 bits (880), Expect = 4.4e-91
Identity = 195/254 (76.77%), Postives = 219/254 (86.22%), Query Frame = 1


Query: 1   MPLLEEGRSLAGYTLDDVLANNRFGPPASATARAAEIRGRTLLDVIRDEEPSAAKGLFGK 60
           M ++E+GRSLAGYTLDDVLANNR GPP  ATARA EIRGRTLLD+IRDEEPSA KGLFGK
Sbjct: 1   MSMVEDGRSLAGYTLDDVLANNRLGPP--ATARATEIRGRTLLDIIRDEEPSAGKGLFGK 60

Query: 61  DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH 120
           DKRTWKSFR+KLRLKRAGSAWVSTVPIPTSD+P Q KRSL+G+R+Q+RFNT SS+NSTD+
Sbjct: 61  DKRTWKSFRDKLRLKRAGSAWVSTVPIPTSDIPVQTKRSLIGRRNQIRFNTGSSKNSTDN 120

Query: 121 SARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSR-MRPQMSRH 180
            +R+PSEESSKS RRQ+SRQ+STMNSSSDS+ F YDES +YSS PD+AP R MRPQMSRH
Sbjct: 121 HSRHPSEESSKSTRRQMSRQTSTMNSSSDSSAFHYDESSEYSSSPDAAPVRIMRPQMSRH 180

Query: 181 TSIRIPNPTENYTDLTEPDHDNRVRHISSAFSERRMMSARETVAAQEAAD-----AAAAA 240
            S+R+ NP ENYTD TEPD DNR+RH  S  S+ RMMSARE VAAQEAAD     AAAAA
Sbjct: 181 NSVRVSNPMENYTDPTEPDRDNRIRH--SNLSDHRMMSAREAVAAQEAADAASAAAAAAA 240

Query: 241 AAAEAAEEEEEKEK 249
           AAAEAAEEE+ K K
Sbjct: 241 AAAEAAEEEKNKTK 250

[Close]

BLAST of Cp4.1LG05g00620 vs. NCBI nr
Match: gi|1009149507|ref|XP_015892515.1| (PREDICTED: uncharacterized protein LOC107426760 [Ziziphus jujuba])

HSP 1 Score: 255.4 bits (651), Expect = 1.6e-64
Identity = 175/394 (44.42%), Postives = 231/394 (58.63%), Query Frame = 1


Query: 1   MPLLEEGRSLAGYTLDDVLANNRFGPPASATARAAEIRGRTLLDVIRDEEPSAA--KGLF 60
           M    + R LAG TLDDVL   +   PA   A      GRTLLD+IRDEEP +   KG  
Sbjct: 64  MSAAADSRDLAGLTLDDVLGTEKRPVPAPPPAPPRSQSGRTLLDIIRDEEPKSGTFKGFS 123

Query: 61  GKDKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNST 120
            +DK+ WKSF+++LRLKRAG+AW S+ PIP SD+     RSL+ + + V F+T S    +
Sbjct: 124 NRDKKAWKSFKDRLRLKRAGNAWNSSAPIPASDIRILNHRSLLLRHNSVNFHTASLPTVS 183

Query: 121 DHSARNPSEES------------SKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPD 180
            H+   P+E                + R Q+SR+ ST   +     F  D S D      
Sbjct: 184 RHNMAYPNENPVDIPAVGDMMAPPNNGRPQISRRGSTRFGA-----FSSDNSDDDVL--- 243

Query: 181 SAPSRMRPQMSRHTSIRIP-NPTENYTDLTEPDHDNRVRHISSAFSERRMMSARETVAAQ 240
           +  +  RPQ+SR  S+R   +  +N  D T+P      R +S+A ++ R +SARE VAAQ
Sbjct: 244 AGQNTTRPQISRRHSVRFALSSDDNVGDQTDPPQREGSRRLSAALADERSLSAREAVAAQ 303

Query: 241 EAADAAAAAAAAEAAEEEEEKEKEQNEDENENVESTTGSEEGEKESPTSEPVRMSLMDLL 300
           EAA+A AAAAAA A +E E+++ E          +  G E G       +PVRMSLMDLL
Sbjct: 304 EAAEAEAAAAAAAAEQEAEDEDGE---------SAPEGGEGG-------QPVRMSLMDLL 363

Query: 301 HETDREMGFEGSNYGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAA 360
            ETDR+MG  GS Y MG E+D   DEE+   EE++E++ +G E +CCVCMV+HK A    
Sbjct: 364 EETDRQMGLVGSRYMMGDEDD--YDEEEEEDEEDEEEESNGVEHNCCVCMVRHKGAAFIP 423

Query: 361 CGHTFCRLCSKELMVSRGNCPTCSDFILEMLEAF 380
           CGHTFCRLCS+EL VSRGNCP C+ FILE+L+ F
Sbjct: 424 CGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 431

[Close]

BLAST of Cp4.1LG05g00620 vs. NCBI nr
Match: gi|802716698|ref|XP_012085096.1| (PREDICTED: uncharacterized protein LOC105644385 isoform X2 [Jatropha curcas])

HSP 1 Score: 251.1 bits (640), Expect = 3.0e-63
Identity = 187/402 (46.52%), Postives = 245/402 (60.95%), Query Frame = 1


Query: 1   MPLLEEGRSLAGYTLDDVLANNRFGPPASATARAAEIRGRTLLDVIRDEEPSAAKGLFG- 60
           M  LE  R LAG TLD VL   +   PA+A A       RTLLD+IRD+EP  +  LFG 
Sbjct: 1   MSALEGTRDLAGLTLDAVLGGEK--RPAAALAPTPAQMNRTLLDIIRDDEPHVS--LFGH 60

Query: 61  KDKRTWKSFREKLRLKRA-GSAWVSTVPIPTSDMPFQ-----------PKRSLMGKRSQV 120
           KDK+TWK+FRE+LRL+R+ GSAW S+VP+P SD+P Q             RS + +R+ V
Sbjct: 61  KDKKTWKAFRERLRLRRSGGSAWTSSVPVPASDIPIQNNNQSFSSNYPQPRSFIARRNSV 120

Query: 121 RFNTPSSRNST--DHSARNPSEESSKSIRRQVSRQSSTMNSSSDSTP---FQYDESFDYS 180
           RF   S  +ST  + S+ NP+    ++I   + R++S+    S  TP    + DES  + 
Sbjct: 121 RFTGSSPGDSTHAEDSSDNPAVSGHRAI---MCRRTSSRYGPSGLTPSESMRSDES-SFG 180

Query: 181 SIPDSAPSR-MRPQMSRHTSIRIPNPTENYTDLTEPDHDNRVRHISSAFSERRMMSARET 240
            + D  P R +R QMSRH SIR P+ ++ +    E +     R + +  +E R MSARE 
Sbjct: 181 ILGDEPPLRSLRAQMSRHNSIRNPDSSQFFD--AEEETGQSSRRLGAVITEDRAMSAREA 240

Query: 241 VAAQEAADAAAAAAAAEAAEEEEEKEKEQNEDENENVESTTGSEEGEKESPTSEPVRMSL 300
           VAAQEAA+A AAA AA  AEEEE  E+E++ED      ++ G+ E       + PVRMSL
Sbjct: 241 VAAQEAAEAEAAAQAAAEAEEEEYDEEEEDEDS----PTSAGAAE-------AAPVRMSL 300

Query: 301 MDLLHETDREMGFEGSNYGMGFEEDGFSDEEDVAYEEEDEDDGSGG----EFSCCVCMVK 360
           MDLL ETDR+MGF GS+Y MG   D +  EE+   EEED+DDG  G    E +CCVCMV+
Sbjct: 301 MDLLEETDRQMGFVGSSYTMG---DDYDCEEE---EEEDDDDGMDGGDGIEHTCCVCMVR 360

Query: 361 HKNAPMAACGHTFCRLCSKELMVSRGNCPTCSDFILEMLEAF 380
           HK A    CGHTFCRLCS+EL V RGNCP C+ +I E+L+ F
Sbjct: 361 HKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGYISEILDIF 375

[Close]

BLAST of Cp4.1LG05g00620 vs. NCBI nr
Match: gi|802716695|ref|XP_012085094.1| (PREDICTED: uncharacterized protein LOC105644385 isoform X1 [Jatropha curcas])

HSP 1 Score: 251.1 bits (640), Expect = 3.0e-63
Identity = 187/402 (46.52%), Postives = 245/402 (60.95%), Query Frame = 1


Query: 1   MPLLEEGRSLAGYTLDDVLANNRFGPPASATARAAEIRGRTLLDVIRDEEPSAAKGLFG- 60
           M  LE  R LAG TLD VL   +   PA+A A       RTLLD+IRD+EP  +  LFG 
Sbjct: 85  MSALEGTRDLAGLTLDAVLGGEK--RPAAALAPTPAQMNRTLLDIIRDDEPHVS--LFGH 144

Query: 61  KDKRTWKSFREKLRLKRA-GSAWVSTVPIPTSDMPFQ-----------PKRSLMGKRSQV 120
           KDK+TWK+FRE+LRL+R+ GSAW S+VP+P SD+P Q             RS + +R+ V
Sbjct: 145 KDKKTWKAFRERLRLRRSGGSAWTSSVPVPASDIPIQNNNQSFSSNYPQPRSFIARRNSV 204

Query: 121 RFNTPSSRNST--DHSARNPSEESSKSIRRQVSRQSSTMNSSSDSTP---FQYDESFDYS 180
           RF   S  +ST  + S+ NP+    ++I   + R++S+    S  TP    + DES  + 
Sbjct: 205 RFTGSSPGDSTHAEDSSDNPAVSGHRAI---MCRRTSSRYGPSGLTPSESMRSDES-SFG 264

Query: 181 SIPDSAPSR-MRPQMSRHTSIRIPNPTENYTDLTEPDHDNRVRHISSAFSERRMMSARET 240
            + D  P R +R QMSRH SIR P+ ++ +    E +     R + +  +E R MSARE 
Sbjct: 265 ILGDEPPLRSLRAQMSRHNSIRNPDSSQFFD--AEEETGQSSRRLGAVITEDRAMSAREA 324

Query: 241 VAAQEAADAAAAAAAAEAAEEEEEKEKEQNEDENENVESTTGSEEGEKESPTSEPVRMSL 300
           VAAQEAA+A AAA AA  AEEEE  E+E++ED      ++ G+ E       + PVRMSL
Sbjct: 325 VAAQEAAEAEAAAQAAAEAEEEEYDEEEEDEDS----PTSAGAAE-------AAPVRMSL 384

Query: 301 MDLLHETDREMGFEGSNYGMGFEEDGFSDEEDVAYEEEDEDDGSGG----EFSCCVCMVK 360
           MDLL ETDR+MGF GS+Y MG   D +  EE+   EEED+DDG  G    E +CCVCMV+
Sbjct: 385 MDLLEETDRQMGFVGSSYTMG---DDYDCEEE---EEEDDDDGMDGGDGIEHTCCVCMVR 444

Query: 361 HKNAPMAACGHTFCRLCSKELMVSRGNCPTCSDFILEMLEAF 380
           HK A    CGHTFCRLCS+EL V RGNCP C+ +I E+L+ F
Sbjct: 445 HKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGYISEILDIF 459

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g00620 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG05g00620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L944_CUCSA	9.8e-146	75.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G628230 PE=4 SV=1	[more]
A0A067JUA1_JATCU	2.1e-63	46.52	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17536 PE=4 SV=1	[more]
B9S513_RICCO	3.9e-62	45.02	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1719530 PE=4 SV=1	[more]
B9GQJ4_POPTR	1.0e-57	46.59	Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0002s24530g PE=4 SV=2	[more]
A0A067FRX5_CITSI	7.2e-56	42.71	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017330mg PE=4 SV=1	[more]

BLAST of Cp4.1LG05g00620 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07120.1	1.6e-54	42.42	RING/U-box superfamily protein	[more]
AT3G25030.1	7.4e-20	46.96	RING/U-box superfamily protein	[more]
AT4G13100.2	6.1e-14	37.67	RING/U-box superfamily protein	[more]
AT4G22250.1	7.5e-12	39.42	RING/U-box superfamily protein	[more]
AT4G03965.1	1.7e-11	34.21	RING/U-box superfamily protein	[more]

BLAST of Cp4.1LG05g00620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778682138\|ref\|XP_011651651.1\|	1.4e-145	75.45	PREDICTED: protein FAM9A [Cucumis sativus]	[more]
gi\|659131007\|ref\|XP_008465469.1\|	4.4e-91	76.77	PREDICTED: uncharacterized serine-rich protein C1E8.05-like [Cucumis melo]	[more]
gi\|1009149507\|ref\|XP_015892515.1\|	1.6e-64	44.42	PREDICTED: uncharacterized protein LOC107426760 [Ziziphus jujuba]	[more]
gi\|802716698\|ref\|XP_012085096.1\|	3.0e-63	46.52	PREDICTED: uncharacterized protein LOC105644385 isoform X2 [Jatropha curcas]	[more]
gi\|802716695\|ref\|XP_012085094.1\|	3.0e-63	46.52	PREDICTED: uncharacterized protein LOC105644385 isoform X1 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g00620.1	Cp4.1LG05g00620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 331..368 score: 0.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 331..369 score: 10
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 317..370 score: 1.2
None	No IPR available	unknown	Coil	Coil	coord: 223..261 scor
None	No IPR available	PANTHER	PTHR12183	UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN	coord: 278..379 score: 8.6E-18coord: 60..209 score: 8.6
None	No IPR available	PANTHER	PTHR12183:SF11	C3HC4 TYPE RING-FINGER PROTEIN-RELATED	coord: 60..209 score: 8.6E-18coord: 278..379 score: 8.6
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 330..372 score: 4.
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 318..374 score: 9.19

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG05g00620	Cucsa.150230	Cucumber (Gy14) v1	cgycpeB0403
Cp4.1LG05g00620	Cucsa.078180	Cucumber (Gy14) v1	cgycpeB0138
Cp4.1LG05g00620	CmaCh19G001630	Cucurbita maxima (Rimu)	cmacpeB543
Cp4.1LG05g00620	CmaCh02G016800	Cucurbita maxima (Rimu)	cmacpeB647
Cp4.1LG05g00620	CmoCh19G001830	Cucurbita moschata (Rifu)	cmocpeB498
Cp4.1LG05g00620	CmoCh02G017250	Cucurbita moschata (Rifu)	cmocpeB596
Cp4.1LG05g00620	Cla002716	Watermelon (97103) v1	cpewmB701
Cp4.1LG05g00620	Csa7G342770	Cucumber (Chinese Long) v2	cpecuB769
Cp4.1LG05g00620	Csa3G628230	Cucumber (Chinese Long) v2	cpecuB716
Cp4.1LG05g00620	ClCG09G008900	Watermelon (Charleston Gray)	cpewcgB630
Cp4.1LG05g00620	ClCG07G001980	Watermelon (Charleston Gray)	cpewcgB683
Cp4.1LG05g00620	CSPI03G27520	Wild cucumber (PI 183967)	cpecpiB718
Cp4.1LG05g00620	Lsi05G011200	Bottle gourd (USVL1VR-Ls)	cpelsiB616
Cp4.1LG05g00620	Lsi02G020940	Bottle gourd (USVL1VR-Ls)	cpelsiB611
Cp4.1LG05g00620	CsaV3_3G029950	Cucumber (Chinese Long) v3	cpecucB0893
Cp4.1LG05g00620	CsaV3_7G026120	Cucumber (Chinese Long) v3	cpecucB0951
Cp4.1LG05g00620	Bhi05G000056	Wax gourd	cpewgoB0936
Cp4.1LG05g00620	CsGy7G012950	Cucumber (Gy14) v2	cgybcpeB976
Cp4.1LG05g00620	CsGy3G025610	Cucumber (Gy14) v2	cgybcpeB424
Cp4.1LG05g00620	Carg08901	Silver-seed gourd	carcpeB1099

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG05g00620	Silver-seed gourd	carcpeB0406
Cp4.1LG05g00620	Silver-seed gourd	carcpeB1332
Cp4.1LG05g00620	Silver-seed gourd	carcpeB1506
Cp4.1LG05g00620	Wax gourd	cpewgoB0923
Cp4.1LG05g00620	Cucurbita pepo (Zucchini)	cpecpeB189
Cp4.1LG05g00620	Cucurbita pepo (Zucchini)	cpecpeB273
Cp4.1LG05g00620	Cucurbita pepo (Zucchini)	cpecpeB340
Cp4.1LG05g00620	Cucurbita pepo (Zucchini)	cpecpeB478
Cp4.1LG05g00620	Cucurbita pepo (Zucchini)	cpecpeB507
Cp4.1LG05g00620	Cucurbita maxima (Rimu)	cmacpeB407
Cp4.1LG05g00620	Cucurbita maxima (Rimu)	cmacpeB930
Cp4.1LG05g00620	Cucurbita moschata (Rifu)	cmocpeB369
Cp4.1LG05g00620	Cucurbita moschata (Rifu)	cmocpeB865
Cp4.1LG05g00620	Bottle gourd (USVL1VR-Ls)	cpelsiB584
Cp4.1LG05g00620	Watermelon (97103) v1	cpewmB752
Cp4.1LG05g00620	Cucumber (Gy14) v2	cgybcpeB432
Cp4.1LG05g00620	Melon (DHL92) v3.6.1	cpemedB825
Cp4.1LG05g00620	Melon (DHL92) v3.6.1	cpemedB834