Cla002716 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla002716
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	RING/U-box domain-containing protein (AHRD V1 -- F4JS90_ARATH); contains Interpro domain(s) IPR001841 Zinc finger, RING-type
Location	Chr7 : 304426 .. 305559 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTTGGTTGAGGATGGCCGTAGCCTGGCAGGCTATACACTCGACGACGTTTTGGCTAACAATAGATTAGGGCCACCGGCCACTGCAAGGGCCGCCGAAATCCGTGGCCGAACCCTACTGGACATAATCCGCGACGAGGAGCCGAGCGCCGGCAAGGGGCTTTTCGGAAGGGACAAAAGGACTTGGAAGTCTTTTAGGGATAAACTCCGGCTGAAACGCGCCGGATCTGCTTGGGTCTCGACGGTTCCGATTCCCACCTCCGATATTCCTGTTCACACCAAGCGATCTCTAATTGGAAGGCGAAATCAAGTCCGTTTCAATACACCTCCGTCCAGACACTCCACCGATTATTCGACTCGTAATCCGTCTGAAGAATCTTCCAAAACCACTCGGCGTCAAATGTCTCGACAGACTTCCACAATGAACAGCTCAAGCGATTCGTCCGCGTTCCATTACGATGAATCCTCCGATTACTCATCGGCTCCAGATGCAGCGCCAACTCGAATCATGAGACCGCAAATGTCGCGCCATAACTCAGTCCGAGTCTCGAATCCAATGGAGAACTACACCGATCCAATGGAACCAGATAGCGATAACCGAGTTCGACACTCCAATTTCTCAGACCACAGAATGATGTCTGCTAGAGAAGCCGTCGCAGCACAAGAAGCAGCAGATGCAGCTTCCGCTGCTGCTGCCGCGGCGGAAGCCGCAGAAGAAGAAAAAGAACAAAACGAAAACAACGAGAACGGAAATGAAAACGAAAACGAAGAGTCAACAACCGGATCAGAGGAGGAGGAGTCTTCGCCGACGTCGGAGCCGGTGAGGATGTCGTTGATGGATCTGTTGCACGAGACGGACAGAGAAATGGGATTCGAAGGATCGAGTTACGGAATGGGGTTTGGAGAAAATTTCTTCAACGACGATGAAGAAGATGATGAATACGAAGATGATGAAGATGATGGTACTGGCGGAGAATTCACGTGCTGCGTTTGTATGGTGAAGCATAAGAATCCGCCATTGGGGGCTTGCGGCCATACTTTTTGCCGGCTCTGTTCGAAGGAGCTGATGGTCAGCCGCGGGAACTGTCCGACTTGCAGCAATTTCATCTTGGAAATCCTTGATGCTTTTTGA

mRNA sequence

ATGTCGTTGGTTGAGGATGGCCGTAGCCTGGCAGGCTATACACTCGACGACGTTTTGGCTAACAATAGATTAGGGCCACCGGCCACTGCAAGGGCCGCCGAAATCCGTGGCCGAACCCTACTGGACATAATCCGCGACGAGGAGCCGAGCGCCGGCAAGGGGCTTTTCGGAAGGGACAAAAGGACTTGGAAGTCTTTTAGGGATAAACTCCGGCTGAAACGCGCCGGATCTGCTTGGGTCTCGACGGTTCCGATTCCCACCTCCGATATTCCTGTTCACACCAAGCGATCTCTAATTGGAAGGCGAAATCAAGTCCGTTTCAATACACCTCCGTCCAGACACTCCACCGATTATTCGACTCGTAATCCGTCTGAAGAATCTTCCAAAACCACTCGGCGTCAAATGTCTCGACAGACTTCCACAATGAACAGCTCAAGCGATTCGTCCGCGTTCCATTACGATGAATCCTCCGATTACTCATCGGCTCCAGATGCAGCGCCAACTCGAATCATGAGACCGCAAATGTCGCGCCATAACTCAGTCCGAGTCTCGAATCCAATGGAGAACTACACCGATCCAATGGAACCAGATAGCGATAACCGAGTTCGACACTCCAATTTCTCAGACCACAGAATGATGTCTGCTAGAGAAGCCGTCGCAGCACAAGAAGCAGCAGATGCAGCTTCCGCTGCTGCTGCCGCGGCGGAAGCCGCAGAAGAAGAAAAAGAACAAAACGAAAACAACGAGAACGGAAATGAAAACGAAAACGAAGAGTCAACAACCGGATCAGAGGAGGAGGAGTCTTCGCCGACGTCGGAGCCGGTGAGGATGTCGTTGATGGATCTGTTGCACGAGACGGACAGAGAAATGGGATTCGAAGGATCGAGTTACGGAATGGGGTTTGGAGAAAATTTCTTCAACGACGATGAAGAAGATGATGAATACGAAGATGATGAAGATGATGGTACTGGCGGAGAATTCACGTGCTGCGTTTGTATGGTGAAGCATAAGAATCCGCCATTGGGGGCTTGCGGCCATACTTTTTGCCGGCTCTGTTCGAAGGAGCTGATGGTCAGCCGCGGGAACTGTCCGACTTGCAGCAATTTCATCTTGGAAATCCTTGATGCTTTTTGA

Coding sequence (CDS)

ATGTCGTTGGTTGAGGATGGCCGTAGCCTGGCAGGCTATACACTCGACGACGTTTTGGCTAACAATAGATTAGGGCCACCGGCCACTGCAAGGGCCGCCGAAATCCGTGGCCGAACCCTACTGGACATAATCCGCGACGAGGAGCCGAGCGCCGGCAAGGGGCTTTTCGGAAGGGACAAAAGGACTTGGAAGTCTTTTAGGGATAAACTCCGGCTGAAACGCGCCGGATCTGCTTGGGTCTCGACGGTTCCGATTCCCACCTCCGATATTCCTGTTCACACCAAGCGATCTCTAATTGGAAGGCGAAATCAAGTCCGTTTCAATACACCTCCGTCCAGACACTCCACCGATTATTCGACTCGTAATCCGTCTGAAGAATCTTCCAAAACCACTCGGCGTCAAATGTCTCGACAGACTTCCACAATGAACAGCTCAAGCGATTCGTCCGCGTTCCATTACGATGAATCCTCCGATTACTCATCGGCTCCAGATGCAGCGCCAACTCGAATCATGAGACCGCAAATGTCGCGCCATAACTCAGTCCGAGTCTCGAATCCAATGGAGAACTACACCGATCCAATGGAACCAGATAGCGATAACCGAGTTCGACACTCCAATTTCTCAGACCACAGAATGATGTCTGCTAGAGAAGCCGTCGCAGCACAAGAAGCAGCAGATGCAGCTTCCGCTGCTGCTGCCGCGGCGGAAGCCGCAGAAGAAGAAAAAGAACAAAACGAAAACAACGAGAACGGAAATGAAAACGAAAACGAAGAGTCAACAACCGGATCAGAGGAGGAGGAGTCTTCGCCGACGTCGGAGCCGGTGAGGATGTCGTTGATGGATCTGTTGCACGAGACGGACAGAGAAATGGGATTCGAAGGATCGAGTTACGGAATGGGGTTTGGAGAAAATTTCTTCAACGACGATGAAGAAGATGATGAATACGAAGATGATGAAGATGATGGTACTGGCGGAGAATTCACGTGCTGCGTTTGTATGGTGAAGCATAAGAATCCGCCATTGGGGGCTTGCGGCCATACTTTTTGCCGGCTCTGTTCGAAGGAGCTGATGGTCAGCCGCGGGAACTGTCCGACTTGCAGCAATTTCATCTTGGAAATCCTTGATGCTTTTTGA

Protein sequence

MSLVEDGRSLAGYTLDDVLANNRLGPPATARAAEIRGRTLLDIIRDEEPSAGKGLFGRDKRTWKSFRDKLRLKRAGSAWVSTVPIPTSDIPVHTKRSLIGRRNQVRFNTPPSRHSTDYSTRNPSEESSKTTRRQMSRQTSTMNSSSDSSAFHYDESSDYSSAPDAAPTRIMRPQMSRHNSVRVSNPMENYTDPMEPDSDNRVRHSNFSDHRMMSAREAVAAQEAADAASAAAAAAEAAEEEKEQNENNENGNENENEESTTGSEEEESSPTSEPVRMSLMDLLHETDREMGFEGSSYGMGFGENFFNDDEEDDEYEDDEDDGTGGEFTCCVCMVKHKNPPLGACGHTFCRLCSKELMVSRGNCPTCSNFILEILDAF

Homology

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BLAST of Cla002716 vs. Swiss-Prot
Match: DSPP_HUMAN (Dentin sialophosphoprotein OS=Homo sapiens GN=DSPP PE=1 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 5.2e-07
Identity = 48/219 (21.92%), Postives = 97/219 (44.29%), Query Frame = 1


Query: 108  NTPPSRHSTDYSTRNPSEESSKTTRRQMSRQTSTMNSSSDSSAFHYDESSDYSSAPDAAP 167
            N   S +S+D S  + S  SS ++    S ++S  + SSDSS     +SSD S++ D++ 
Sbjct: 857  NRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSD 916

Query: 168  TRIMRPQMSRHNSVRVSNPME--NYTDPME-PDSDNRVRHSNFSDHRMMSAREAVAAQEA 227
            +          NS   SN  +  N +D  +  DS N    SN SD    S      + ++
Sbjct: 917  SSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDS 976

Query: 228  ADAASAAAAAAEAAEEEKEQNENNENGNENENEESTTGSEEEESSPTSEPVRMSLMDLLH 287
            +D+++++ ++   + +  + ++++++ N +++ +S+  S+   SS +S     S      
Sbjct: 977  SDSSNSSDSS--DSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSS 1036

Query: 288  ETDREMGFEGSSYGMGFGENFFNDDEEDDEYEDDEDDGT 324
            ++        SS      ++  + D  D     D  D +
Sbjct: 1037 DSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSS 1073

HSP 2 Score: 53.1 bits (126), Expect = 7.5e-06
Identity = 46/221 (20.81%), Postives = 95/221 (42.99%), Query Frame = 1


Query: 112 SRHSTDYSTRNPSEESSKTTRRQMSRQTSTMNSSSDSS-AFHYDESSDYSSAPDAAPTRI 171
           S  S+D S  + S +SS ++    S  +S  + SS+SS + +  +SSD S + D+  +  
Sbjct: 764 SSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNS 823

Query: 172 MRPQMSRHNSVRV----SNPMENYTDPMEPDSDNRVRHSNFSDHRMMS-AREAVAAQEAA 231
                S  +S       S+   + +D  + DS NR   SN SD    S +  +  + +++
Sbjct: 824 SDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSS 883

Query: 232 DAASAAAAAAEAAEEEKEQNENNENGNENENEESTTGSEEEESSPTSEPVRMSLMDLLHE 291
           D+  ++ ++  +       ++++++ N +++ +S+  S+  ESS +S+    S      +
Sbjct: 884 DSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSD 943

Query: 292 TDREMGFEGSSYGMGFGENFFNDDEEDDEYEDDEDDGTGGE 327
           +        SS      ++  + D  D    D  D     +
Sbjct: 944 SSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSD 984

HSP 3 Score: 51.6 bits (122), Expect = 2.2e-05
Identity = 43/226 (19.03%), Postives = 96/226 (42.48%), Query Frame = 1


Query: 108 NTPPSRHSTDYSTRNPSEESS--KTTRRQMSRQTSTMNSSSDSSAFHYDESSDYSSAPDA 167
           N+  S  S+D S  + S +SS  K+   +    +S  +S SDSS  +  +SSD S + D+
Sbjct: 600 NSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDS 659

Query: 168 APTRIMRPQMSRHNSVRVSNPMENYTDPMEPDSDNRVRHSNFSDHRMMSAREAVAAQEAA 227
           + +          +S   S+  ++       DS +    S  SD    S  ++  + +++
Sbjct: 660 SNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSS 719

Query: 228 DAASAAAAAAEAAEEEKEQN-----ENNENGNENENEESTTGSEEEESSPTSEPVRMSLM 287
           ++ S+ + ++ +++     N     +++++ N +++ +S+  S   +SS +S+    S  
Sbjct: 720 NSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDS 779

Query: 288 DLLHETDREMGFEGSSYGMGFGENFFNDDEEDDEYEDDEDDGTGGE 327
               +++       SS      ++  + D  D     D D     +
Sbjct: 780 SNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSD 825

HSP 4 Score: 32.7 bits (73), Expect = 1.0e+01
Identity = 30/99 (30.30%), Postives = 44/99 (44.44%), Query Frame = 1


Query: 112  SRHSTDYSTRNPSEESSKTTRRQMSRQTSTMNSSSDSSAFHYDESSDYSSAPDAAPTRIM 171
            S  S+D S  + S +SS ++    S  +S  N SSDSS     +SSD S++ D++ +   
Sbjct: 1201 SSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSS--DSSDSSDSSNSSDSSDSSDS 1260

Query: 172  RPQMSRHN--SVRVSNPMENYTDPMEPDSDNRVRHSNFS 209
                S  N  S   S       +  + DSD+    SN S
Sbjct: 1261 SDSTSDSNDESDSQSKSGNGNNNGSDSDSDSEGSDSNHS 1297

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BLAST of Cla002716 vs. TrEMBL
Match: A0A0A0L944_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G628230 PE=4 SV=1)

HSP 1 Score: 655.6 bits (1690), Expect = 3.7e-185
Identity = 331/383 (86.42%), Postives = 350/383 (91.38%), Query Frame = 1


Query: 1   MSLVEDGRSLAGYTLDDVLANNRLGPPATARAAEIRGRTLLDIIRDEEPSAGKGLFGRDK 60
           MS+VEDGRSLAGYTLDDVLANNRLGPPATARA EIRGRTLLDIIRDEEPS GKGLFG+DK
Sbjct: 1   MSMVEDGRSLAGYTLDDVLANNRLGPPATARATEIRGRTLLDIIRDEEPSTGKGLFGKDK 60

Query: 61  RTWKSFRDKLRLKRAGSAWVSTVPIPTSDIPVHTKRSLIGRRNQVRFNTPPSRHSTDYST 120
           RTWKSFRDKLRLKRAGSAWVSTVPIPTSDIPVH KRSL+GRRNQVRFNT  S++S D  +
Sbjct: 61  RTWKSFRDKLRLKRAGSAWVSTVPIPTSDIPVHNKRSLMGRRNQVRFNTGSSKNSPDNQS 120

Query: 121 RNPSEESSKTTRRQMSRQTSTMNSSSDSSAFHYDESSDYSSAPDAAPTRIMRPQMSRHNS 180
           R+PSEE+SK+TRRQM RQTSTMNSSSDSSAFHYDESS+YSS+PDAAP RIMRPQMSRHNS
Sbjct: 121 RHPSEETSKSTRRQMCRQTSTMNSSSDSSAFHYDESSEYSSSPDAAPVRIMRPQMSRHNS 180

Query: 181 VRVSNPMENYTDPMEPDSDNRVRHSNFSDHRMMSAREAVAAQEAADAAS---AAAAAAEA 240
           VRVSNPMENYTDP EPD DNR+RH N S+HRMMSAREAVAAQEAADAAS   AAAAAAEA
Sbjct: 181 VRVSNPMENYTDPTEPDRDNRIRHLNLSEHRMMSAREAVAAQEAADAASAAAAAAAAAEA 240

Query: 241 AEEEKEQNE-NNENGNENENEESTTGS--EEEESSPTSEPVRMSLMDLLHETDREMGFEG 300
           AEEEK+QNE NNE+GNENE EESTT S  EEEESSP SEPVRMSLMDLLHETDREMGFE 
Sbjct: 241 AEEEKKQNENNNESGNENEEEESTTESEEEEEESSPASEPVRMSLMDLLHETDREMGFER 300

Query: 301 SSYGMGFGENFFNDDEEDDEYEDDEDDGTGGEFTCCVCMVKHKNPPLGACGHTFCRLCSK 360
           SSYGMGF  NF  +D EDDEYE+DEDDG G EF+CCVCMVKHKN PL +CGHTFCRLCSK
Sbjct: 301 SSYGMGFEGNFLEED-EDDEYEEDEDDGNGEEFSCCVCMVKHKNGPLASCGHTFCRLCSK 360

Query: 361 ELMVSRGNCPTCSNFILEILDAF 378
           ELMVSRGNCPTCSNFILEILDAF
Sbjct: 361 ELMVSRGNCPTCSNFILEILDAF 382

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BLAST of Cla002716 vs. TrEMBL
Match: A0A067JUA1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17536 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.9e-77
Identity = 183/395 (46.33%), Postives = 238/395 (60.25%), Query Frame = 1


Query: 1   MSLVEDGRSLAGYTLDDVLANNRLGPPATARAAEIRGRTLLDIIRDEEPSAGKGLFG-RD 60
           MS +E  R LAG TLD VL   +    A A       RTLLDIIRD+EP     LFG +D
Sbjct: 1   MSALEGTRDLAGLTLDAVLGGEKRPAAALAPTPAQMNRTLLDIIRDDEPHVS--LFGHKD 60

Query: 61  KRTWKSFRDKLRLKRAG-SAWVSTVPIPTSDIPVHTK-----------RSLIGRRNQVRF 120
           K+TWK+FR++LRL+R+G SAW S+VP+P SDIP+              RS I RRN VRF
Sbjct: 61  KKTWKAFRERLRLRRSGGSAWTSSVPVPASDIPIQNNNQSFSSNYPQPRSFIARRNSVRF 120

Query: 121 --NTPPSRHSTDYSTRNPSEESSKTTRRQMSRQTSTMNSSSD---SSAFHYDESSDYSSA 180
             ++P      + S+ NP+    +     M R+TS+    S    S +   DESS +   
Sbjct: 121 TGSSPGDSTHAEDSSDNPAVSGHRAI---MCRRTSSRYGPSGLTPSESMRSDESS-FGIL 180

Query: 181 PDAAPTRIMRPQMSRHNSVRVSNPMENYTDPMEPDSDNRVRHSNFSDHRMMSAREAVAAQ 240
            D  P R +R QMSRHNS+R  +  + +    E    +R   +  ++ R MSAREAVAAQ
Sbjct: 181 GDEPPLRSLRAQMSRHNSIRNPDSSQFFDAEEETGQSSRRLGAVITEDRAMSAREAVAAQ 240

Query: 241 EAADAASAAAAAAEAAEEEKEQNENNENGNENENEESTTGSEEEESSPTSEPVRMSLMDL 300
           EAA+A +AA AAAEA EEE ++ E        E+E+S T +   E++P    VRMSLMDL
Sbjct: 241 EAAEAEAAAQAAAEAEEEEYDEEE--------EDEDSPTSAGAAEAAP----VRMSLMDL 300

Query: 301 LHETDREMGFEGSSYGMGFGENFFNDDEEDDEYEDDEDDGTGGEFTCCVCMVKHKNPPLG 360
           L ETDR+MGF GSSY MG  +++  ++EE+++ +D  D G G E TCCVCMV+HK     
Sbjct: 301 LEETDRQMGFVGSSYTMG--DDYDCEEEEEEDDDDGMDGGDGIEHTCCVCMVRHKGAAFI 360

Query: 361 ACGHTFCRLCSKELMVSRGNCPTCSNFILEILDAF 378
            CGHTFCRLCS+EL V RGNCP C+ +I EILD F
Sbjct: 361 PCGHTFCRLCSRELWVQRGNCPLCNGYISEILDIF 375

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BLAST of Cla002716 vs. TrEMBL
Match: B9GQJ4_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0002s24530g PE=4 SV=2)

HSP 1 Score: 283.9 bits (725), Expect = 2.9e-73
Identity = 179/369 (48.51%), Postives = 213/369 (57.72%), Query Frame = 1


Query: 38  RTLLDIIRDEEPSAGKGLFG-RDKRTWKSFRDKLRLKRAGSAWVSTVPIPTSDIPVHTK- 97
           RTLLDIIRDEE  +   LFG +DK++WK+FRDKLRLKRAGSAW S+V  P SDIP+  + 
Sbjct: 49  RTLLDIIRDEESGS---LFGHKDKKSWKAFRDKLRLKRAGSAWTSSVHTPASDIPIPVEN 108

Query: 98  ------------RSLIGRRNQVRFNT------PPSRHSTDYSTRNPSEESSKTTRRQMSR 157
                       RSL+ RRN VRF T      P    S D S   PS    + TRR  +R
Sbjct: 109 RFRNSNINNASSRSLMTRRNSVRFTTVSSVISPELEESDDNSGMGPSSRP-QMTRRSSTR 168

Query: 158 QTSTMNSSSDSSAFHYDESSDYSSAPDAAPTRIMRPQMSRHNSVRVSNPMENYTDPMEPD 217
             S M      S    D      +  D  P+R  RPQ+SRHNS R   P+ + T   E D
Sbjct: 169 FGSAMLQVQSESTHSGDPDVSIHAVEDGPPSRGFRPQISRHNSTRF--PVVDSTQSDEND 228

Query: 218 SDNRVRHSN------FSDHRMMSAREAVAAQEAADAASAAAAAAEAAEEEKEQNENNENG 277
            D   R          ++ R++SAREAVAAQEAA+AA+   AAA AA E + +       
Sbjct: 229 LDPSAREGTTRLGTALAEERLLSAREAVAAQEAAEAAAQEEAAATAAAEHEAE------- 288

Query: 278 NENENEESTTGSEEEESSPTSEPVRMSLMDLLHETDREMGFEGSSYGMGFGENFFNDDEE 337
              E      GS E     T EPVRMSLMDLL ETDR+MGFEGS Y +G  E   +DD+E
Sbjct: 289 ---EGAMPMPGSTE-----TQEPVRMSLMDLLEETDRQMGFEGSRYTVGDLEACDDDDDE 348

Query: 338 DDEYED--DEDDGTGG-EFTCCVCMVKHKNPPLGACGHTFCRLCSKELMVSRGNCPTCSN 378
           D+E ED  +E DG  G E+TCCVCMV+HK      CGHTFCRLCS+EL V RGNCP C+ 
Sbjct: 349 DEEEEDGGEEGDGVAGIEYTCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNG 396

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BLAST of Cla002716 vs. TrEMBL
Match: B9S513_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1719530 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 4.9e-73
Identity = 185/402 (46.02%), Postives = 229/402 (56.97%), Query Frame = 1


Query: 10  LAGYTLDDVLANNRLGPPATARAAEIRGRTLLDIIRDEEPSAGKGLFG-RDKRTWKSFRD 69
           LAG TLD VL + +  P  TA A     RTLLDIIRDEEP     LFG +DK++WK+FRD
Sbjct: 5   LAGLTLDAVLGDKQAQPTPTATAQ--MNRTLLDIIRDEEPHGS--LFGHKDKKSWKAFRD 64

Query: 70  KLRLKRAGSAWVSTVPIPTSDIPVHT----------KRSLIGRRNQVRFNTPPSRHSTDY 129
           +LRLKRAG+AW STVPIP SDIP++            RSL+ RRN VRF T     S D+
Sbjct: 65  RLRLKRAGAAWTSTVPIPASDIPIYNANSTASNFNQSRSLMSRRNSVRFTT---LSSGDH 124

Query: 130 STRNPSEESSKTTRRQMSRQTSTMNSSSDSSAFHYDE-SSDYSSA----------PDAAP 189
           S R   +++              ++ S  +  F     SS Y S+           D   
Sbjct: 125 SPRLEEDDNGYHNNDHPPAPAQAVSVSGSARPFMVRRVSSRYGSSLLPDENIHAVGDEPQ 184

Query: 190 TRIMRPQMSRHNSVRVSNPMENYTDPMEPD-------SDNRVRHSNFSDHRMMSAREAVA 249
           +R  RPQMSRHNS R  N    +T   E +          R   +  ++ R +SAREAVA
Sbjct: 185 SRSFRPQMSRHNSTR--NGESPFTGGGEDEVAREGGGGSGRRLGAALAEERALSAREAVA 244

Query: 250 AQEAADAASAAAAAAEAAEEEKEQNENNENGNENENEESTTGSEEEESSPTSEPVRMSLM 309
           AQEAA+A +AA AAAEAAEE+               E ++ G+EE      ++PVRMSLM
Sbjct: 245 AQEAAEAEAAAQAAAEAAEED---------------EGNSPGAEE------AQPVRMSLM 304

Query: 310 DLLHETDREMGFEGSSYGMGFGENFFNDDEEDDEYEDDEDD-----GTGGEFTCCVCMVK 369
           DLL ETDR+MGF GS Y +G      +DDEE +E ++DEDD     G G E TCCVCMV+
Sbjct: 305 DLLEETDRQMGFVGSRYTIG------DDDEECEEEQEDEDDNGVDGGDGIEHTCCVCMVR 364

Query: 370 HKNPPLGACGHTFCRLCSKELMVSRGNCPTCSNFILEILDAF 378
           HK      CGHTFCRLCS+EL V RGNCP C+ FI+EILD F
Sbjct: 365 HKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFIVEILDIF 370

[Close]

BLAST of Cla002716 vs. TrEMBL
Match: V4T971_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020442mg PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 4.6e-71
Identity = 183/403 (45.41%), Postives = 233/403 (57.82%), Query Frame = 1


Query: 1   MSLVEDGRS-LAGYTLDDVLANNRLGPPATARAAEIRGRTLLDIIRDEEPSAGKGLFGRD 60
           MS V+D R  LAG TLD +L N R  PP         GRTLLDIIRDE+P+ GK    +D
Sbjct: 28  MSAVQDRRDPLAGLTLDAILTNKRPSPPRAPA-----GRTLLDIIRDEDPN-GKNFGHKD 87

Query: 61  KRTWKSFRDKLRLKRAGSAWVSTVPIPTSDIPVHTK-------RSLIGRRNQVRFNTPPS 120
           +++WK FRD+LRLKRAG+AW S+V IPTSDIP+ +        RS + RR+ VRF T P+
Sbjct: 88  RKSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNPRSQLIRRSSVRFQTNPA 147

Query: 121 RHSTDY--STRNPSEESSKTTRRQMSRQTSTMNSSSDSSAFHYDESSDYSSAPDAAPTRI 180
                     R P  + +   RR  S+  S+    + SS  H+++S +     + +PTR 
Sbjct: 148 GELASQLEDNRGPPPQFA---RRPSSKVASSSPGPTQSS--HHEDSPE----GEGSPTRS 207

Query: 181 MR-PQMSRHNSVRV---SNPM--ENYTDPMEPDSDNRVRHSN-FSDHRMMSAREAVAAQE 240
            R PQ+SRHNS RV   SN +  +N  DP +   +   R +   +  R +SAREAVAAQE
Sbjct: 208 SRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSAREAVAAQE 267

Query: 241 AADAASAAAAAAEAAEEEKEQNENNENGNENENEESTTGSEEEESSPTS-EPVRMSLMDL 300
           AA+A +AAAAA   AE E E +   E             +E E + P      RMSLMDL
Sbjct: 268 AAEAEAAAAAAEAEAEAEAEASVQVE-------------AEAEAAEPVQPRQPRMSLMDL 327

Query: 301 LHETDREMGFEGSSYGMGFGENFFNDDEEDDEYE-------DDEDDGTGG-EFTCCVCMV 360
           L ETDR+MG EGS Y +G  E    ++EE+ E E       DD ++  GG E  CCVCMV
Sbjct: 328 LEETDRQMGLEGSRYAVGEDEEEEEEEEEEAEAEGEYEEEGDDVEENAGGIEHNCCVCMV 387

Query: 361 KHKNPPLGACGHTFCRLCSKELMVSRGNCPTCSNFILEILDAF 378
           +HK      CGHTFCRLCS+EL V RGNCP C+ FILEILD F
Sbjct: 388 RHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 402

[Close]

BLAST of Cla002716 vs. NCBI nr
Match: gi|778682138|ref|XP_011651651.1| (PREDICTED: protein FAM9A [Cucumis sativus])

HSP 1 Score: 655.6 bits (1690), Expect = 5.3e-185
Identity = 331/383 (86.42%), Postives = 350/383 (91.38%), Query Frame = 1


Query: 1   MSLVEDGRSLAGYTLDDVLANNRLGPPATARAAEIRGRTLLDIIRDEEPSAGKGLFGRDK 60
           MS+VEDGRSLAGYTLDDVLANNRLGPPATARA EIRGRTLLDIIRDEEPS GKGLFG+DK
Sbjct: 1   MSMVEDGRSLAGYTLDDVLANNRLGPPATARATEIRGRTLLDIIRDEEPSTGKGLFGKDK 60

Query: 61  RTWKSFRDKLRLKRAGSAWVSTVPIPTSDIPVHTKRSLIGRRNQVRFNTPPSRHSTDYST 120
           RTWKSFRDKLRLKRAGSAWVSTVPIPTSDIPVH KRSL+GRRNQVRFNT  S++S D  +
Sbjct: 61  RTWKSFRDKLRLKRAGSAWVSTVPIPTSDIPVHNKRSLMGRRNQVRFNTGSSKNSPDNQS 120

Query: 121 RNPSEESSKTTRRQMSRQTSTMNSSSDSSAFHYDESSDYSSAPDAAPTRIMRPQMSRHNS 180
           R+PSEE+SK+TRRQM RQTSTMNSSSDSSAFHYDESS+YSS+PDAAP RIMRPQMSRHNS
Sbjct: 121 RHPSEETSKSTRRQMCRQTSTMNSSSDSSAFHYDESSEYSSSPDAAPVRIMRPQMSRHNS 180

Query: 181 VRVSNPMENYTDPMEPDSDNRVRHSNFSDHRMMSAREAVAAQEAADAAS---AAAAAAEA 240
           VRVSNPMENYTDP EPD DNR+RH N S+HRMMSAREAVAAQEAADAAS   AAAAAAEA
Sbjct: 181 VRVSNPMENYTDPTEPDRDNRIRHLNLSEHRMMSAREAVAAQEAADAASAAAAAAAAAEA 240

Query: 241 AEEEKEQNE-NNENGNENENEESTTGS--EEEESSPTSEPVRMSLMDLLHETDREMGFEG 300
           AEEEK+QNE NNE+GNENE EESTT S  EEEESSP SEPVRMSLMDLLHETDREMGFE 
Sbjct: 241 AEEEKKQNENNNESGNENEEEESTTESEEEEEESSPASEPVRMSLMDLLHETDREMGFER 300

Query: 301 SSYGMGFGENFFNDDEEDDEYEDDEDDGTGGEFTCCVCMVKHKNPPLGACGHTFCRLCSK 360
           SSYGMGF  NF  +D EDDEYE+DEDDG G EF+CCVCMVKHKN PL +CGHTFCRLCSK
Sbjct: 301 SSYGMGFEGNFLEED-EDDEYEEDEDDGNGEEFSCCVCMVKHKNGPLASCGHTFCRLCSK 360

Query: 361 ELMVSRGNCPTCSNFILEILDAF 378
           ELMVSRGNCPTCSNFILEILDAF
Sbjct: 361 ELMVSRGNCPTCSNFILEILDAF 382

[Close]

BLAST of Cla002716 vs. NCBI nr
Match: gi|659131007|ref|XP_008465469.1| (PREDICTED: uncharacterized serine-rich protein C1E8.05-like [Cucumis melo])

HSP 1 Score: 436.4 bits (1121), Expect = 5.0e-119
Identity = 219/247 (88.66%), Postives = 232/247 (93.93%), Query Frame = 1


Query: 1   MSLVEDGRSLAGYTLDDVLANNRLGPPATARAAEIRGRTLLDIIRDEEPSAGKGLFGRDK 60
           MS+VEDGRSLAGYTLDDVLANNRLGPPATARA EIRGRTLLDIIRDEEPSAGKGLFG+DK
Sbjct: 1   MSMVEDGRSLAGYTLDDVLANNRLGPPATARATEIRGRTLLDIIRDEEPSAGKGLFGKDK 60

Query: 61  RTWKSFRDKLRLKRAGSAWVSTVPIPTSDIPVHTKRSLIGRRNQVRFNTPPSRHSTDYST 120
           RTWKSFRDKLRLKRAGSAWVSTVPIPTSDIPV TKRSLIGRRNQ+RFNT  S++STD  +
Sbjct: 61  RTWKSFRDKLRLKRAGSAWVSTVPIPTSDIPVQTKRSLIGRRNQIRFNTGSSKNSTDNHS 120

Query: 121 RNPSEESSKTTRRQMSRQTSTMNSSSDSSAFHYDESSDYSSAPDAAPTRIMRPQMSRHNS 180
           R+PSEESSK+TRRQMSRQTSTMNSSSDSSAFHYDESS+YSS+PDAAP RIMRPQMSRHNS
Sbjct: 121 RHPSEESSKSTRRQMSRQTSTMNSSSDSSAFHYDESSEYSSSPDAAPVRIMRPQMSRHNS 180

Query: 181 VRVSNPMENYTDPMEPDSDNRVRHSNFSDHRMMSAREAVAAQEAADAASAAAAAAEAAEE 240
           VRVSNPMENYTDP EPD DNR+RHSN SDHRMMSAREAVAAQEAADAASAAAAAA AA E
Sbjct: 181 VRVSNPMENYTDPTEPDRDNRIRHSNLSDHRMMSAREAVAAQEAADAASAAAAAAAAAAE 240

Query: 241 EKEQNEN 248
             E+ +N
Sbjct: 241 AAEEEKN 247

[Close]

BLAST of Cla002716 vs. NCBI nr
Match: gi|1009149507|ref|XP_015892515.1| (PREDICTED: uncharacterized protein LOC107426760 [Ziziphus jujuba])

HSP 1 Score: 303.9 bits (777), Expect = 3.9e-79
Identity = 188/399 (47.12%), Postives = 234/399 (58.65%), Query Frame = 1


Query: 1   MSLVEDGRSLAGYTLDDVLANNR----LGPPATARAAEIRGRTLLDIIRDEEPSAG--KG 60
           MS   D R LAG TLDDVL   +      PPA  R+    GRTLLDIIRDEEP +G  KG
Sbjct: 64  MSAAADSRDLAGLTLDDVLGTEKRPVPAPPPAPPRSQS--GRTLLDIIRDEEPKSGTFKG 123

Query: 61  LFGRDKRTWKSFRDKLRLKRAGSAWVSTVPIPTSDIPVHTKRSLIGRRNQVRFNTPP--- 120
              RDK+ WKSF+D+LRLKRAG+AW S+ PIP SDI +   RSL+ R N V F+T     
Sbjct: 124 FSNRDKKAWKSFKDRLRLKRAGNAWNSSAPIPASDIRILNHRSLLLRHNSVNFHTASLPT 183

Query: 121 -SRHSTDYSTRNPSEESS--------KTTRRQMSRQTSTMNSSSDSSAFHYDESSDYSSA 180
            SRH+  Y   NP +  +           R Q+SR+ ST        AF    SSD S  
Sbjct: 184 VSRHNMAYPNENPVDIPAVGDMMAPPNNGRPQISRRGSTR-----FGAF----SSDNSDD 243

Query: 181 PDAAPTRIMRPQMSRHNSVRVS----NPMENYTDPMEPDSDNRVRHSNFSDHRMMSAREA 240
              A     RPQ+SR +SVR +    + + + TDP + +   R+  +  +D R +SAREA
Sbjct: 244 DVLAGQNTTRPQISRRHSVRFALSSDDNVGDQTDPPQREGSRRLSAA-LADERSLSAREA 303

Query: 241 VAAQEAADAASAAAAAAEAAEEEKEQNENNENGNENENEESTTGSEEEESSPTSEPVRMS 300
           VAAQEAA+A +AAAAAA   E E E  E+   G E                   +PVRMS
Sbjct: 304 VAAQEAAEAEAAAAAAAAEQEAEDEDGESAPEGGEG-----------------GQPVRMS 363

Query: 301 LMDLLHETDREMGFEGSSYGMGFGENFFNDDEEDDEYEDDEDDGTGGEFTCCVCMVKHKN 360
           LMDLL ETDR+MG  GS Y MG  +++  D+EE+++ ED+E++  G E  CCVCMV+HK 
Sbjct: 364 LMDLLEETDRQMGLVGSRYMMGDEDDY--DEEEEEDEEDEEEESNGVEHNCCVCMVRHKG 423

Query: 361 PPLGACGHTFCRLCSKELMVSRGNCPTCSNFILEILDAF 378
                CGHTFCRLCS+EL VSRGNCP C+ FILEILD F
Sbjct: 424 AAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 431

[Close]

BLAST of Cla002716 vs. NCBI nr
Match: gi|802716698|ref|XP_012085096.1| (PREDICTED: uncharacterized protein LOC105644385 isoform X2 [Jatropha curcas])

HSP 1 Score: 297.7 bits (761), Expect = 2.8e-77
Identity = 183/395 (46.33%), Postives = 238/395 (60.25%), Query Frame = 1


Query: 1   MSLVEDGRSLAGYTLDDVLANNRLGPPATARAAEIRGRTLLDIIRDEEPSAGKGLFG-RD 60
           MS +E  R LAG TLD VL   +    A A       RTLLDIIRD+EP     LFG +D
Sbjct: 1   MSALEGTRDLAGLTLDAVLGGEKRPAAALAPTPAQMNRTLLDIIRDDEPHVS--LFGHKD 60

Query: 61  KRTWKSFRDKLRLKRAG-SAWVSTVPIPTSDIPVHTK-----------RSLIGRRNQVRF 120
           K+TWK+FR++LRL+R+G SAW S+VP+P SDIP+              RS I RRN VRF
Sbjct: 61  KKTWKAFRERLRLRRSGGSAWTSSVPVPASDIPIQNNNQSFSSNYPQPRSFIARRNSVRF 120

Query: 121 --NTPPSRHSTDYSTRNPSEESSKTTRRQMSRQTSTMNSSSD---SSAFHYDESSDYSSA 180
             ++P      + S+ NP+    +     M R+TS+    S    S +   DESS +   
Sbjct: 121 TGSSPGDSTHAEDSSDNPAVSGHRAI---MCRRTSSRYGPSGLTPSESMRSDESS-FGIL 180

Query: 181 PDAAPTRIMRPQMSRHNSVRVSNPMENYTDPMEPDSDNRVRHSNFSDHRMMSAREAVAAQ 240
            D  P R +R QMSRHNS+R  +  + +    E    +R   +  ++ R MSAREAVAAQ
Sbjct: 181 GDEPPLRSLRAQMSRHNSIRNPDSSQFFDAEEETGQSSRRLGAVITEDRAMSAREAVAAQ 240

Query: 241 EAADAASAAAAAAEAAEEEKEQNENNENGNENENEESTTGSEEEESSPTSEPVRMSLMDL 300
           EAA+A +AA AAAEA EEE ++ E        E+E+S T +   E++P    VRMSLMDL
Sbjct: 241 EAAEAEAAAQAAAEAEEEEYDEEE--------EDEDSPTSAGAAEAAP----VRMSLMDL 300

Query: 301 LHETDREMGFEGSSYGMGFGENFFNDDEEDDEYEDDEDDGTGGEFTCCVCMVKHKNPPLG 360
           L ETDR+MGF GSSY MG  +++  ++EE+++ +D  D G G E TCCVCMV+HK     
Sbjct: 301 LEETDRQMGFVGSSYTMG--DDYDCEEEEEEDDDDGMDGGDGIEHTCCVCMVRHKGAAFI 360

Query: 361 ACGHTFCRLCSKELMVSRGNCPTCSNFILEILDAF 378
            CGHTFCRLCS+EL V RGNCP C+ +I EILD F
Sbjct: 361 PCGHTFCRLCSRELWVQRGNCPLCNGYISEILDIF 375

[Close]

BLAST of Cla002716 vs. NCBI nr
Match: gi|802716695|ref|XP_012085094.1| (PREDICTED: uncharacterized protein LOC105644385 isoform X1 [Jatropha curcas])

HSP 1 Score: 297.7 bits (761), Expect = 2.8e-77
Identity = 183/395 (46.33%), Postives = 238/395 (60.25%), Query Frame = 1


Query: 1   MSLVEDGRSLAGYTLDDVLANNRLGPPATARAAEIRGRTLLDIIRDEEPSAGKGLFG-RD 60
           MS +E  R LAG TLD VL   +    A A       RTLLDIIRD+EP     LFG +D
Sbjct: 85  MSALEGTRDLAGLTLDAVLGGEKRPAAALAPTPAQMNRTLLDIIRDDEPHVS--LFGHKD 144

Query: 61  KRTWKSFRDKLRLKRAG-SAWVSTVPIPTSDIPVHTK-----------RSLIGRRNQVRF 120
           K+TWK+FR++LRL+R+G SAW S+VP+P SDIP+              RS I RRN VRF
Sbjct: 145 KKTWKAFRERLRLRRSGGSAWTSSVPVPASDIPIQNNNQSFSSNYPQPRSFIARRNSVRF 204

Query: 121 --NTPPSRHSTDYSTRNPSEESSKTTRRQMSRQTSTMNSSSD---SSAFHYDESSDYSSA 180
             ++P      + S+ NP+    +     M R+TS+    S    S +   DESS +   
Sbjct: 205 TGSSPGDSTHAEDSSDNPAVSGHRAI---MCRRTSSRYGPSGLTPSESMRSDESS-FGIL 264

Query: 181 PDAAPTRIMRPQMSRHNSVRVSNPMENYTDPMEPDSDNRVRHSNFSDHRMMSAREAVAAQ 240
            D  P R +R QMSRHNS+R  +  + +    E    +R   +  ++ R MSAREAVAAQ
Sbjct: 265 GDEPPLRSLRAQMSRHNSIRNPDSSQFFDAEEETGQSSRRLGAVITEDRAMSAREAVAAQ 324

Query: 241 EAADAASAAAAAAEAAEEEKEQNENNENGNENENEESTTGSEEEESSPTSEPVRMSLMDL 300
           EAA+A +AA AAAEA EEE ++ E        E+E+S T +   E++P    VRMSLMDL
Sbjct: 325 EAAEAEAAAQAAAEAEEEEYDEEE--------EDEDSPTSAGAAEAAP----VRMSLMDL 384

Query: 301 LHETDREMGFEGSSYGMGFGENFFNDDEEDDEYEDDEDDGTGGEFTCCVCMVKHKNPPLG 360
           L ETDR+MGF GSSY MG  +++  ++EE+++ +D  D G G E TCCVCMV+HK     
Sbjct: 385 LEETDRQMGFVGSSYTMG--DDYDCEEEEEEDDDDGMDGGDGIEHTCCVCMVRHKGAAFI 444

Query: 361 ACGHTFCRLCSKELMVSRGNCPTCSNFILEILDAF 378
            CGHTFCRLCS+EL V RGNCP C+ +I EILD F
Sbjct: 445 PCGHTFCRLCSRELWVQRGNCPLCNGYISEILDIF 459

The following BLAST results are available for this feature:

BLAST of Cla002716 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DSPP_HUMAN	5.2e-07	21.92	Dentin sialophosphoprotein OS=Homo sapiens GN=DSPP PE=1 SV=2	[more]

BLAST of Cla002716 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L944_CUCSA	3.7e-185	86.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G628230 PE=4 SV=1	[more]
A0A067JUA1_JATCU	1.9e-77	46.33	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17536 PE=4 SV=1	[more]
B9GQJ4_POPTR	2.9e-73	48.51	Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0002s24530g PE=4 SV=2	[more]
B9S513_RICCO	4.9e-73	46.02	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1719530 PE=4 SV=1	[more]
V4T971_9ROSI	4.6e-71	45.41	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020442mg PE=4 SV=1	[more]

BLAST of Cla002716 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778682138\|ref\|XP_011651651.1\|	5.3e-185	86.42	PREDICTED: protein FAM9A [Cucumis sativus]	[more]
gi\|659131007\|ref\|XP_008465469.1\|	5.0e-119	88.66	PREDICTED: uncharacterized serine-rich protein C1E8.05-like [Cucumis melo]	[more]
gi\|1009149507\|ref\|XP_015892515.1\|	3.9e-79	47.12	PREDICTED: uncharacterized protein LOC107426760 [Ziziphus jujuba]	[more]
gi\|802716698\|ref\|XP_012085096.1\|	2.8e-77	46.33	PREDICTED: uncharacterized protein LOC105644385 isoform X2 [Jatropha curcas]	[more]
gi\|802716695\|ref\|XP_012085094.1\|	2.8e-77	46.33	PREDICTED: uncharacterized protein LOC105644385 isoform X1 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU09631	watermelon EST collection version 2.0	transcribed_cluster
WMU67048	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla002716	Cla002716.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU67048	WMU67048	transcribed_cluster
WMU09631	WMU09631	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 329..366 score: 0.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 329..367 score: 10
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 313..369 score: 2.2
None	No IPR available	unknown	Coil	Coil	coord: 221..258 scor
None	No IPR available	PANTHER	PTHR12183	UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN	coord: 58..214 score: 1.3E-17coord: 276..377 score: 1.3
None	No IPR available	PANTHER	PTHR12183:SF11	C3HC4 TYPE RING-FINGER PROTEIN-RELATED	coord: 58..214 score: 1.3E-17coord: 276..377 score: 1.3
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 327..370 score: 2.
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 328..373 score: 1.89

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla002716	Cla97C07G130250	Watermelon (97103) v2	wmwmbB176
Cla002716	Csa7G342770	Cucumber (Chinese Long) v2	cuwmB587
Cla002716	Csa3G628230	Cucumber (Chinese Long) v2	cuwmB227
Cla002716	MELO3C027000	Melon (DHL92) v3.5.1	mewmB367
Cla002716	ClCG07G001980	Watermelon (Charleston Gray)	wcgwmB374
Cla002716	ClCG09G008900	Watermelon (Charleston Gray)	wcgwmB026
Cla002716	CSPI03G27520	Wild cucumber (PI 183967)	cpiwmB225
Cla002716	Cucsa.078180	Cucumber (Gy14) v1	cgywmB084
Cla002716	Cucsa.150230	Cucumber (Gy14) v1	cgywmB266
Cla002716	CmaCh02G016800	Cucurbita maxima (Rimu)	cmawmB559
Cla002716	CmaCh19G001630	Cucurbita maxima (Rimu)	cmawmB492
Cla002716	CmoCh02G017250	Cucurbita moschata (Rifu)	cmowmB552
Cla002716	CmoCh19G001830	Cucurbita moschata (Rifu)	cmowmB486
Cla002716	Lsi02G020940	Bottle gourd (USVL1VR-Ls)	lsiwmB194
Cla002716	Lsi05G011200	Bottle gourd (USVL1VR-Ls)	lsiwmB357
Cla002716	Cp4.1LG05g00620	Cucurbita pepo (Zucchini)	cpewmB701
Cla002716	Cp4.1LG15g01360	Cucurbita pepo (Zucchini)	cpewmB255
Cla002716	CsGy7G012950	Cucumber (Gy14) v2	cgybwmB549
Cla002716	CsGy3G025610	Cucumber (Gy14) v2	cgybwmB212
Cla002716	Carg08901	Silver-seed gourd	carwmB0779
Cla002716	CsaV3_3G029950	Cucumber (Chinese Long) v3	cucwmB234
Cla002716	Bhi05G000056	Wax gourd	wgowmB266

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla002716	Cucumber (Gy14) v2	cgybwmB209
Cla002716	Melon (DHL92) v3.6.1	medwmB445
Cla002716	Silver-seed gourd	carwmB0285
Cla002716	Watermelon (97103) v2	wmwmbB162
Cla002716	Watermelon (97103) v1	wmwmB100
Cla002716	Cucumber (Gy14) v1	cgywmB476
Cla002716	Cucurbita moschata (Rifu)	cmowmB791
Cla002716	Melon (DHL92) v3.5.1	mewmB460
Cla002716	Cucumber (Chinese Long) v2	cuwmB223
Cla002716	Watermelon (Charleston Gray)	wcgwmB282
Cla002716	Cucurbita pepo (Zucchini)	cpewmB258
Cla002716	Cucurbita pepo (Zucchini)	cpewmB843
Cla002716	Bottle gourd (USVL1VR-Ls)	lsiwmB360