Cp4.1LG05g00090 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g00090
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGlycerol kinase
LocationCp4.1LG05 : 923580 .. 924583 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAATGAGCAATTTGATTCAAGAATCAGCAGAACCCCAGAACCCAGAACAACAGCATTTCGATTCCCGCTTCTCCACTCTCTGCCTCAACCCCGGCGGCACCCACCACCGTCGTCCTCCACTCTGTTCTTCATGCGGCCGCCGTCCACCTCGCTGCGCTGCCACACACAAGAAACGACGCTCCCCAACGCAGATTCAAGACCCCGCAGCCACCACCAAGAAGCACCTTCTTGATCCTCAACAACACAATCTCACTTCCTTCTCCAAGATCGATCTCCCAATCCCCTTCGGCCCTTCCTCGGCCCATCCCACTCCCTTCTCCCCTCTCTCCCGCTCTGTTTCCGACCCCACCGAAGCTCGTAATTTCTCCCCTCTCTCCCGCTCTGTTTCCGACCCCACCGAATCTCGTAATTTCTCCCCTCCGTCGCCAGCCAAGCGCTTATGTCCCAATTCGGCGCTCCCGCCGCTGCCCCTCCGGCGTACGGTTTCAGACCCGACTCCCTCCACTGACAAAACCTCCGATTCCCCTCTTACAATTGGGAGAGTCAATGATTCGATCAAAGAAGACAGCCCCGATTCAAAGGTTCCCTTTTCTTGTTTTTGTTAATGCCCTTTAATTCAAACCTTATTTTGGGGAATTTTAATGACAGAGGCTGAGAAAAATCAAGGATCGACTGAAGGAGATGAATGAATGGTGGAAGGAAGTGATGAGTGAACAAGAACACGAAGAGGAAAAAAGGGATGAAAATGAGACCAAAAAGGTACGATTTTTAGAAACAAGAATGTTCATATTCTTCCTTTTTGTTGTCAATTTAGGATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNGAAAGTTGAGTGTTGCAAGGAAGAAGAGGATGAAGAAGAAACAGTGGGAGTGGAGAGGGTGGGGGATTCATTGGAGCTTCGTTTGAAGTGTCCCTGTGGCAAAGGCTTCGAGATTCTTCTTTCTGGAACCAGCTGTTTCTACAAGCTTCTG

mRNA sequence

CAATGAGCAATTTGATTCAAGAATCAGCAGAACCCCAGAACCCAGAACAACAGCATTTCGATTCCCGCTTCTCCACTCTCTGCCTCAACCCCGGCGGCACCCACCACCGTCGTCCTCCACTCTGTTCTTCATGCGGCCGCCGTCCACCTCGCTGCGCTGCCACACACAAGAAACGACGCTCCCCAACGCAGATTCAAGACCCCGCAGCCACCACCAAGAAGCACCTTCTTGATCCTCAACAACACAATCTCACTTCCTTCTCCAAGATCGATCTCCCAATCCCCTTCGGCCCTTCCTCGGCCCATCCCACTCCCTTCTCCCCTCTCTCCCGCTCTGTTTCCGACCCCACCGAAGCTCGTAATTTCTCCCCTCTCTCCCGCTCTGTTTCCGACCCCACCGAATCTCGTAATTTCTCCCCTCCGTCGCCAGCCAAGCGCTTATGTCCCAATTCGGCGCTCCCGCCGCTGCCCCTCCGGCGTACGGTTTCAGACCCGACTCCCTCCACTGACAAAACCTCCGATTCCCCTCTTACAATTGGGAGAGTCAATGATTCGATCAAAGAAGACAGCCCCGATTCAAAGAGGCTGAGAAAAATCAAGGATCGACTGAAGGAGATGAATGAATGGTGGAAGGAAGTGATGAGTGAACAAGAACACGAAGAGGAAAAAAGGGATGAAAATGAGACCAAAAAGTGTTGCAAGGAAGAAGAGGATGAAGAAGAAACAGTGGGAGTGGAGAGGGTGGGGGATTCATTGGAGCTTCGTTTGAAGTGTCCCTGTGGCAAAGGCTTCGAGATTCTTCTTTCTGGAACCAGCTGTTTCTACAAGCTTCTG

Coding sequence (CDS)

ATGAGCAATTTGATTCAAGAATCAGCAGAACCCCAGAACCCAGAACAACAGCATTTCGATTCCCGCTTCTCCACTCTCTGCCTCAACCCCGGCGGCACCCACCACCGTCGTCCTCCACTCTGTTCTTCATGCGGCCGCCGTCCACCTCGCTGCGCTGCCACACACAAGAAACGACGCTCCCCAACGCAGATTCAAGACCCCGCAGCCACCACCAAGAAGCACCTTCTTGATCCTCAACAACACAATCTCACTTCCTTCTCCAAGATCGATCTCCCAATCCCCTTCGGCCCTTCCTCGGCCCATCCCACTCCCTTCTCCCCTCTCTCCCGCTCTGTTTCCGACCCCACCGAAGCTCGTAATTTCTCCCCTCTCTCCCGCTCTGTTTCCGACCCCACCGAATCTCGTAATTTCTCCCCTCCGTCGCCAGCCAAGCGCTTATGTCCCAATTCGGCGCTCCCGCCGCTGCCCCTCCGGCGTACGGTTTCAGACCCGACTCCCTCCACTGACAAAACCTCCGATTCCCCTCTTACAATTGGGAGAGTCAATGATTCGATCAAAGAAGACAGCCCCGATTCAAAGAGGCTGAGAAAAATCAAGGATCGACTGAAGGAGATGAATGAATGGTGGAAGGAAGTGATGAGTGAACAAGAACACGAAGAGGAAAAAAGGGATGAAAATGAGACCAAAAAGTGTTGCAAGGAAGAAGAGGATGAAGAAGAAACAGTGGGAGTGGAGAGGGTGGGGGATTCATTGGAGCTTCGTTTGAAGTGTCCCTGTGGCAAAGGCTTCGAGATTCTTCTTTCTGGAACCAGCTGTTTCTACAAGCTTCTG

Protein sequence

MSNLIQESAEPQNPEQQHFDSRFSTLCLNPGGTHHRRPPLCSSCGRRPPRCAATHKKRRSPTQIQDPAATTKKHLLDPQQHNLTSFSKIDLPIPFGPSSAHPTPFSPLSRSVSDPTEARNFSPLSRSVSDPTESRNFSPPSPAKRLCPNSALPPLPLRRTVSDPTPSTDKTSDSPLTIGRVNDSIKEDSPDSKRLRKIKDRLKEMNEWWKEVMSEQEHEEEKRDENETKKCCKEEEDEEETVGVERVGDSLELRLKCPCGKGFEILLSGTSCFYKLL
Homology
[Close]
BLAST of Cp4.1LG05g00090 vs. TrEMBL
Match: A0A0A0LI25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G902250 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 5.4e-61
Identity = 162/297 (54.55%), Postives = 193/297 (64.98%), Query Frame = 1 

Query: 1   MSNLIQESAEPQNPEQQHFDSRFSTLCLNPGGTHHRRPPLCSSCGRRPPRCAATHKKRRS 60
           MSN IQE  +P +P Q      FSTLCLN   +    P LCSSC R   R +AT  KR S
Sbjct: 1   MSNPIQE--QPYDPFQS-----FSTLCLNSSSSSAVDPSLCSSCFRPHSRSSATPMKRPS 60

Query: 61  PT----QIQDPAATTKKHLLDPQQHNLTSFSKIDLPIPFGPSSAHPTPFSPLSRSVSDPT 120
           PT    Q      T+K  LLDPQQ N   FSKI+LPIPF PS       SPL RS+SDPT
Sbjct: 61  PTPPSSQQLSTVTTSKNLLLDPQQPNSIPFSKINLPIPFPPS------VSPLRRSLSDPT 120

Query: 121 EARNFSPLSRSVSDPTESRNFSPPSPAKRLCPNSALPPLPLRRTVSDPTPSTDKTSDSPL 180
           +ARNFSP       P +++     SPAKRLC NS LPPLPLRRTVSDP P+ +KTSDSP+
Sbjct: 121 DARNFSP-------PLQTQ-----SPAKRLCLNSPLPPLPLRRTVSDPNPAPEKTSDSPI 180

Query: 181 TIGRVNDSIKEDSPDSKRLRKIKDRLKEMNEWWKEVMSEQE-HEEEK------------- 240
                   I++DSP+SKRL++IKDRLKEMN WW EVMSE+E H +EK             
Sbjct: 181 -------KIQKDSPESKRLKRIKDRLKEMNHWWNEVMSEEEEHNDEKEIKKEWFVNGVFE 240

Query: 241 --RDENETKKCCKEEEDEEETVGVERVGDSLELRLKCPCGKGFEILLSGTSCFYKLL 278
             RD+ E ++  +EE+D+EETVGVERVGDS+ L+LKC CGK F+ILLSG +CFYKLL
Sbjct: 241 IQRDDEEEEEEEEEEKDDEETVGVERVGDSMTLKLKCSCGKRFDILLSGRNCFYKLL 265

[Close]
BLAST of Cp4.1LG05g00090 vs. TrEMBL
Match: A0A0D2QZZ3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G269300 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.7e-20
Identity = 92/242 (38.02%), Postives = 135/242 (55.79%), Query Frame = 1 

Query: 41  CSSCGRRPPRCAATHKKRRSPTQIQDPAATTKKHLLDPQQHNLTSFSKIDLPIPFGPSSA 100
           C++C       A+   KR SP  I +  +  KK LL+  Q++L+ FSKI LP+       
Sbjct: 72  CTTCACNVT--ASNPMKRPSPESIAEHKS--KKPLLE-NQYSLSGFSKIPLPL------- 131

Query: 101 HPTPFSPLSRSVSDPTEARNFSPLSRSVSDPTESRNFSPPSPAKRLCPNSALPPLP--LR 160
                  L RS SDP     ++P   ++SD  ++   +P S       +S+LPP    L 
Sbjct: 132 -------LQRSTSDP-----YTPTKPNLSDTAKTLEDTPLSKGSA---SSSLPPRAPVLS 191

Query: 161 RTVSDPTPSTDKT-SDSPLTIGRVNDSIKEDSPDSKRLRKIKDRLKEMNEWWKEVMSEQE 220
           R++SDP  S  K+ S S  +     + IKE+SP +KRL+++K+R+KEM+ WW E M E E
Sbjct: 192 RSISDPIFSPAKSLSRSSSSYEMGVELIKEESPSAKRLKRMKERMKEMSNWWGEAMREVE 251

Query: 221 HEEEKRDENETKKCCKE--EEDEEETVGVERVGDSLELRLKCPCGKGFEILLSGTSCFYK 278
                 D   T +  K+  E D EE V VE++G+ L+L  KCPCGKG++ILLSG +C+YK
Sbjct: 252 ------DVLCTTEAIKDNGEPDCEEAVRVEKIGECLDLHFKCPCGKGYKILLSGKNCYYK 280

[Close]
BLAST of Cp4.1LG05g00090 vs. TrEMBL
Match: A0A0B0MNH3_GOSAR (Glycerol kinase OS=Gossypium arboreum GN=F383_23275 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-19
Identity = 92/242 (38.02%), Postives = 132/242 (54.55%), Query Frame = 1 

Query: 41  CSSCGRRPPRCAATHKKRRSPTQIQDPAATTKKHLLDPQQHNLTSFSKIDLPIPFGPSSA 100
           C++C       A+   KR SP  I +  +  KK LL+   ++L  FSKI LP+       
Sbjct: 46  CTTCACNV--AASNPMKRPSPESIAEHKS--KKPLLE-NHYSLCGFSKIPLPL------- 105

Query: 101 HPTPFSPLSRSVSDPTEARNFSPLSRSVSDPTESRNFSPPSPAKRLCPNSALPPLP--LR 160
                  L RS SDP     ++P   S SD  ++   +P S       +S+LPP    L 
Sbjct: 106 -------LQRSTSDP-----YTPTKPSPSDTAKALEDTPLSKGSA---SSSLPPRAPVLS 165

Query: 161 RTVSDPTPSTDKT-SDSPLTIGRVNDSIKEDSPDSKRLRKIKDRLKEMNEWWKEVMSEQE 220
           R++SDP  S  K+ S S  +     + IKE+SP +KRL+++K+R+KEM+ WW E M E E
Sbjct: 166 RSISDPIFSPAKSLSRSSSSYEMGVELIKEESPSAKRLKRMKERMKEMSNWWGEAMREVE 225

Query: 221 HEEEKRDENETKKCCKE--EEDEEETVGVERVGDSLELRLKCPCGKGFEILLSGTSCFYK 278
                 D   T +  K+  E D EE V VE++G+ L+L  KCPCGKG++ILLSG +C+YK
Sbjct: 226 ------DVLCTTEAIKDNGEPDCEEAVRVEKIGECLDLHFKCPCGKGYKILLSGKNCYYK 254

[Close]
BLAST of Cp4.1LG05g00090 vs. TrEMBL
Match: A0A0L9U3B5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g027500 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.3e-19
Identity = 92/252 (36.51%), Postives = 128/252 (50.79%), Query Frame = 1 

Query: 40  LCSSCGRRPPRCAATHK--KRRSPTQIQ-DPAATTKKHLLDPQQHNLTSFSKIDLPIPFG 99
           L + C  R P C+A +   KRRSP         +TKK   D  Q +L+ +    +PIP  
Sbjct: 59  LNNGCCHRQPPCSAVNNPMKRRSPPSCSFSGEPSTKKLFCD--QEDLSHYGFSAVPIPLN 118

Query: 100 PSSAHPTPFSPLSRSVSDPTEARNFSPLSRSVSDPTESRNFSPPSPAKRLCPNSALPPLP 159
            +S                 + R+F  L R VSDP      +PP+PA+R    S LPPLP
Sbjct: 119 LNSL--------------VNKRRSFPVLRRCVSDPYRPPAPAPPTPAER---GSGLPPLP 178

Query: 160 --LRRTVSD-PTPSTDKTSDSPLTIGRVNDSIKEDSPDSKRLRKIKDRLKEMNEWWKEVM 219
             LRR+VSD  TPS    ++   T            PDS +LR++K+RLKEM +WW EVM
Sbjct: 179 PGLRRSVSDLSTPSPSLNAEETAT------------PDSVKLRRMKERLKEMRQWWDEVM 238

Query: 220 SEQEHEEEKRDEN----ETKKCCKEEE----DEEETVGVERVGDSLELRLKCPCGKGFEI 278
            + E E  + +E     E +K   +++    D EE V VE     + L  +CPCGKG+E+
Sbjct: 239 KDDEEENVREEEECIAAEDEKVLPQDDLGAGDSEEAVSVEWAEKCVSLGFRCPCGKGYEV 279

[Close]
BLAST of Cp4.1LG05g00090 vs. TrEMBL
Match: V7B0Q2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G026200g PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.9e-19
Identity = 98/283 (34.63%), Postives = 142/283 (50.18%), Query Frame = 1 

Query: 8   SAEPQNPEQQHFDSRFSTLCLNPGGTHHRRPPLCSSCGRRPPRCAATHK--KRRSPTQIQ 67
           S  P  P  +H D    T  + P   +     L ++C R  P C+A +   KRRSP    
Sbjct: 33  SIAPSQPMHEHADH---TSVVEPTDLY-----LNNTCCRCQPPCSAVNNPMKRRSPPSSS 92

Query: 68  ---DPAATTKKHLLDPQQHNLTSFSKIDLPIPFGPSSAHPTPFSPLSRSVSDPTEARNFS 127
              +P+A  KK   D +  +L  FS + +P+           F  L R VSDP      +
Sbjct: 93  VSGEPSA--KKLFCDQEDLSLCGFSAVPVPLNLNSLVNKRRSFPVLRRCVSDPYRPPAPA 152

Query: 128 PLSRSVSDPTESRNFSPPSPAKRLCPNSALPPLP--LRRTVSDPTPSTDKTSDSPLTIGR 187
           P              +PP+PA+R    S LPPLP  LRR+VSD +      + SP     
Sbjct: 153 P--------------APPTPAER---GSGLPPLPPGLRRSVSDVS------APSPCL--- 212

Query: 188 VNDSIKEDSPDSKRLRKIKDRLKEMNEWWKEVMSEQEHEEEKRD---ENETKKCCKEE-- 247
             +S +  +PDS +LR++K+RLKEM +WW EVM ++E +E++ +     E K   +++  
Sbjct: 213 --NSEETAAPDSVKLRRMKERLKEMRQWWDEVMKDEEEDEKEENCVAAEEDKVLPQDDLG 272

Query: 248 -EDEEETVGVERVGDSLELRLKCPCGKGFEILLSGTSCFYKLL 278
            ED EE + VE     L LR +CPCGKG+E+L S  +C+YKLL
Sbjct: 273 GEDSEEEISVEWAEQCLSLRFRCPCGKGYEVLFSENNCYYKLL 277

[Close]
BLAST of Cp4.1LG05g00090 vs. TAIR10
Match: AT2G32235.1 (AT2G32235.1 unknown protein)

HSP 1 Score: 53.5 bits (127), Expect = 2.4e-07
Identity = 91/303 (30.03%), Postives = 134/303 (44.22%), Query Frame = 1 

Query: 6   QESAEPQNPEQQHFDSRFSTLCLNPGGTHHRR------PPLCSSCGR---RPPRCAATHK 65
           QE     +PE+   D   S L LN  G    R      PP   S G           +  
Sbjct: 18  QEVDYSYDPEEDDID--LSLLRLNSFGNSSDRRRANSSPPQFKSYGSFGSSSTTATTSPV 77

Query: 66  KRRSPTQIQDPAATTKKHLL----DPQQHNLTSFSKIDLPI-PFGPSSAHPTPFSPL-SR 125
           KR SP   Q      KK  +    + +  NL  +SKI LP+  F P+       SPL  R
Sbjct: 78  KRPSPESKQGDEPRRKKLFIPRPEEEEDPNLMGYSKIPLPVVEFNPTQIR----SPLYKR 137

Query: 126 SVSDPTEARNFSPLSRSVSDPTESRNFSPPSPAKRLCPNSALPPLP--LRRTVSDPTPST 185
           S+SD   +   S      S  T +      SP     P+  LPP P   RR+VSD +P+ 
Sbjct: 138 SLSDTFASPVGSTFGSGGSGYTRNSVAQETSPPSGNVPS--LPPRPRMFRRSVSDLSPAP 197

Query: 186 DKTSDSPLTIGRVN-----DSIKEDSPDS-KRLRKIKDRLKEMNEW------WKEVMSEQ 245
             +S S L   R N     D    +S D+ K L  IKD ++E+++W      + E +S  
Sbjct: 198 --SSKSLLGSSRSNAIPEGDLANPESSDANKMLYIIKDGVRELDQWCNKLLKYGEAVSSG 257

Query: 246 EHEEEKRDENETKKCCKEEEDEE--ETVGVERVGDSLELRLKCPCGKGFEILLSGTSCFY 278
             +++   +   +   +EE+ +E  E V V R+G++  + + CPCG+ ++ L SG  C+Y
Sbjct: 258 SVKQDDSPKAVDEVVQQEEQPKECKEGVKVNRLGEAFVVEINCPCGRNYQTLFSGRDCYY 310

[Close]
BLAST of Cp4.1LG05g00090 vs. NCBI nr
Match: gi|778687916|ref|XP_011652649.1| (PREDICTED: histone H3.v1-like [Cucumis sativus])

HSP 1 Score: 246.9 bits (629), Expect = 4.1e-62
Identity = 162/286 (56.64%), Postives = 193/286 (67.48%), Query Frame = 1 

Query: 1   MSNLIQESAEPQNPEQQHFDSRFSTLCLNPGGTHHRRPPLCSSCGRRPPRCAATHKKRRS 60
           MSN IQE  +P +P Q      FSTLCLN   +    P LCSSC R   R +AT  KR S
Sbjct: 1   MSNPIQE--QPYDPFQS-----FSTLCLNSSSSSAVDPSLCSSCFRPHSRSSATPMKRPS 60

Query: 61  PT----QIQDPAATTKKHLLDPQQHNLTSFSKIDLPIPFGPSSAHPTPFSPLSRSVSDPT 120
           PT    Q      T+K  LLDPQQ N   FSKI+LPIPF PS       SPL RS+SDPT
Sbjct: 61  PTPPSSQQLSTVTTSKNLLLDPQQPNSIPFSKINLPIPFPPS------VSPLRRSLSDPT 120

Query: 121 EARNFSPLSRSVSDPTESRNFSPPSPAKRLCPNSALPPLPLRRTVSDPTPSTDKTSDSPL 180
           +ARNFSP       P +++     SPAKRLC NS LPPLPLRRTVSDP P+ +KTSDSP+
Sbjct: 121 DARNFSP-------PLQTQ-----SPAKRLCLNSPLPPLPLRRTVSDPNPAPEKTSDSPI 180

Query: 181 TIGRVNDSIKEDSPDSKRLRKIKDRLKEMNEWWKEVMSEQE-HEEEK----RDENETKKC 240
                   I++DSP+SKRL++IKDRLKEMN WW EVMSE+E H +EK    RD+ E ++ 
Sbjct: 181 -------KIQKDSPESKRLKRIKDRLKEMNHWWNEVMSEEEEHNDEKEIKKRDDEEEEEE 240

Query: 241 CKEEEDEEETVGVERVGDSLELRLKCPCGKGFEILLSGTSCFYKLL 278
            +EE+D+EETVGVERVGDS+ L+LKC CGK F+ILLSG +CFYKLL
Sbjct: 241 EEEEKDDEETVGVERVGDSMTLKLKCSCGKRFDILLSGRNCFYKLL 254

[Close]
BLAST of Cp4.1LG05g00090 vs. NCBI nr
Match: gi|700205249|gb|KGN60382.1| (hypothetical protein Csa_3G902250 [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 7.8e-61
Identity = 162/297 (54.55%), Postives = 193/297 (64.98%), Query Frame = 1 

Query: 1   MSNLIQESAEPQNPEQQHFDSRFSTLCLNPGGTHHRRPPLCSSCGRRPPRCAATHKKRRS 60
           MSN IQE  +P +P Q      FSTLCLN   +    P LCSSC R   R +AT  KR S
Sbjct: 1   MSNPIQE--QPYDPFQS-----FSTLCLNSSSSSAVDPSLCSSCFRPHSRSSATPMKRPS 60

Query: 61  PT----QIQDPAATTKKHLLDPQQHNLTSFSKIDLPIPFGPSSAHPTPFSPLSRSVSDPT 120
           PT    Q      T+K  LLDPQQ N   FSKI+LPIPF PS       SPL RS+SDPT
Sbjct: 61  PTPPSSQQLSTVTTSKNLLLDPQQPNSIPFSKINLPIPFPPS------VSPLRRSLSDPT 120

Query: 121 EARNFSPLSRSVSDPTESRNFSPPSPAKRLCPNSALPPLPLRRTVSDPTPSTDKTSDSPL 180
           +ARNFSP       P +++     SPAKRLC NS LPPLPLRRTVSDP P+ +KTSDSP+
Sbjct: 121 DARNFSP-------PLQTQ-----SPAKRLCLNSPLPPLPLRRTVSDPNPAPEKTSDSPI 180

Query: 181 TIGRVNDSIKEDSPDSKRLRKIKDRLKEMNEWWKEVMSEQE-HEEEK------------- 240
                   I++DSP+SKRL++IKDRLKEMN WW EVMSE+E H +EK             
Sbjct: 181 -------KIQKDSPESKRLKRIKDRLKEMNHWWNEVMSEEEEHNDEKEIKKEWFVNGVFE 240

Query: 241 --RDENETKKCCKEEEDEEETVGVERVGDSLELRLKCPCGKGFEILLSGTSCFYKLL 278
             RD+ E ++  +EE+D+EETVGVERVGDS+ L+LKC CGK F+ILLSG +CFYKLL
Sbjct: 241 IQRDDEEEEEEEEEEKDDEETVGVERVGDSMTLKLKCSCGKRFDILLSGRNCFYKLL 265

[Close]
BLAST of Cp4.1LG05g00090 vs. NCBI nr
Match: gi|823195618|ref|XP_012492678.1| (PREDICTED: uncharacterized protein LOC105804554 [Gossypium raimondii])

HSP 1 Score: 106.7 bits (265), Expect = 6.7e-20
Identity = 92/242 (38.02%), Postives = 135/242 (55.79%), Query Frame = 1 

Query: 41  CSSCGRRPPRCAATHKKRRSPTQIQDPAATTKKHLLDPQQHNLTSFSKIDLPIPFGPSSA 100
           C++C       A+   KR SP  I +  +  KK LL+  Q++L+ FSKI LP+       
Sbjct: 72  CTTCACNVT--ASNPMKRPSPESIAEHKS--KKPLLE-NQYSLSGFSKIPLPL------- 131

Query: 101 HPTPFSPLSRSVSDPTEARNFSPLSRSVSDPTESRNFSPPSPAKRLCPNSALPPLP--LR 160
                  L RS SDP     ++P   ++SD  ++   +P S       +S+LPP    L 
Sbjct: 132 -------LQRSTSDP-----YTPTKPNLSDTAKTLEDTPLSKGSA---SSSLPPRAPVLS 191

Query: 161 RTVSDPTPSTDKT-SDSPLTIGRVNDSIKEDSPDSKRLRKIKDRLKEMNEWWKEVMSEQE 220
           R++SDP  S  K+ S S  +     + IKE+SP +KRL+++K+R+KEM+ WW E M E E
Sbjct: 192 RSISDPIFSPAKSLSRSSSSYEMGVELIKEESPSAKRLKRMKERMKEMSNWWGEAMREVE 251

Query: 221 HEEEKRDENETKKCCKE--EEDEEETVGVERVGDSLELRLKCPCGKGFEILLSGTSCFYK 278
                 D   T +  K+  E D EE V VE++G+ L+L  KCPCGKG++ILLSG +C+YK
Sbjct: 252 ------DVLCTTEAIKDNGEPDCEEAVRVEKIGECLDLHFKCPCGKGYKILLSGKNCYYK 280

[Close]
BLAST of Cp4.1LG05g00090 vs. NCBI nr
Match: gi|728815659|gb|KHG01912.1| (Glycerol kinase [Gossypium arboreum])

HSP 1 Score: 104.8 bits (260), Expect = 2.5e-19
Identity = 92/242 (38.02%), Postives = 132/242 (54.55%), Query Frame = 1 

Query: 41  CSSCGRRPPRCAATHKKRRSPTQIQDPAATTKKHLLDPQQHNLTSFSKIDLPIPFGPSSA 100
           C++C       A+   KR SP  I +  +  KK LL+   ++L  FSKI LP+       
Sbjct: 46  CTTCACNV--AASNPMKRPSPESIAEHKS--KKPLLE-NHYSLCGFSKIPLPL------- 105

Query: 101 HPTPFSPLSRSVSDPTEARNFSPLSRSVSDPTESRNFSPPSPAKRLCPNSALPPLP--LR 160
                  L RS SDP     ++P   S SD  ++   +P S       +S+LPP    L 
Sbjct: 106 -------LQRSTSDP-----YTPTKPSPSDTAKALEDTPLSKGSA---SSSLPPRAPVLS 165

Query: 161 RTVSDPTPSTDKT-SDSPLTIGRVNDSIKEDSPDSKRLRKIKDRLKEMNEWWKEVMSEQE 220
           R++SDP  S  K+ S S  +     + IKE+SP +KRL+++K+R+KEM+ WW E M E E
Sbjct: 166 RSISDPIFSPAKSLSRSSSSYEMGVELIKEESPSAKRLKRMKERMKEMSNWWGEAMREVE 225

Query: 221 HEEEKRDENETKKCCKE--EEDEEETVGVERVGDSLELRLKCPCGKGFEILLSGTSCFYK 278
                 D   T +  K+  E D EE V VE++G+ L+L  KCPCGKG++ILLSG +C+YK
Sbjct: 226 ------DVLCTTEAIKDNGEPDCEEAVRVEKIGECLDLHFKCPCGKGYKILLSGKNCYYK 254

[Close]
BLAST of Cp4.1LG05g00090 vs. NCBI nr
Match: gi|920693669|gb|KOM36894.1| (hypothetical protein LR48_Vigan03g027500 [Vigna angularis])

HSP 1 Score: 104.4 bits (259), Expect = 3.3e-19
Identity = 92/252 (36.51%), Postives = 128/252 (50.79%), Query Frame = 1 

Query: 40  LCSSCGRRPPRCAATHK--KRRSPTQIQ-DPAATTKKHLLDPQQHNLTSFSKIDLPIPFG 99
           L + C  R P C+A +   KRRSP         +TKK   D  Q +L+ +    +PIP  
Sbjct: 59  LNNGCCHRQPPCSAVNNPMKRRSPPSCSFSGEPSTKKLFCD--QEDLSHYGFSAVPIPLN 118

Query: 100 PSSAHPTPFSPLSRSVSDPTEARNFSPLSRSVSDPTESRNFSPPSPAKRLCPNSALPPLP 159
            +S                 + R+F  L R VSDP      +PP+PA+R    S LPPLP
Sbjct: 119 LNSL--------------VNKRRSFPVLRRCVSDPYRPPAPAPPTPAER---GSGLPPLP 178

Query: 160 --LRRTVSD-PTPSTDKTSDSPLTIGRVNDSIKEDSPDSKRLRKIKDRLKEMNEWWKEVM 219
             LRR+VSD  TPS    ++   T            PDS +LR++K+RLKEM +WW EVM
Sbjct: 179 PGLRRSVSDLSTPSPSLNAEETAT------------PDSVKLRRMKERLKEMRQWWDEVM 238

Query: 220 SEQEHEEEKRDEN----ETKKCCKEEE----DEEETVGVERVGDSLELRLKCPCGKGFEI 278
            + E E  + +E     E +K   +++    D EE V VE     + L  +CPCGKG+E+
Sbjct: 239 KDDEEENVREEEECIAAEDEKVLPQDDLGAGDSEEAVSVEWAEKCVSLGFRCPCGKGYEV 279

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g00090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG05g00090 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LI25_CUCSA5.4e-6154.55Uncharacterized protein OS=Cucumis sativus GN=Csa_3G902250 PE=4 SV=1[more]
A0A0D2QZZ3_GOSRA4.7e-2038.02Uncharacterized protein OS=Gossypium raimondii GN=B456_007G269300 PE=4 SV=1[more]
A0A0B0MNH3_GOSAR1.8e-1938.02Glycerol kinase OS=Gossypium arboreum GN=F383_23275 PE=4 SV=1[more]
A0A0L9U3B5_PHAAN2.3e-1936.51Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g027500 PE=4 SV=1[more]
V7B0Q2_PHAVU3.9e-1934.63Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G026200g PE=4 SV=1[more]
BLAST of Cp4.1LG05g00090 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G32235.12.4e-0730.03 unknown protein[more]
BLAST of Cp4.1LG05g00090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778687916|ref|XP_011652649.1|4.1e-6256.64PREDICTED: histone H3.v1-like [Cucumis sativus][more]
gi|700205249|gb|KGN60382.1|7.8e-6154.55hypothetical protein Csa_3G902250 [Cucumis sativus][more]
gi|823195618|ref|XP_012492678.1|6.7e-2038.02PREDICTED: uncharacterized protein LOC105804554 [Gossypium raimondii][more]
gi|728815659|gb|KHG01912.1|2.5e-1938.02Glycerol kinase [Gossypium arboreum][more]
gi|920693669|gb|KOM36894.1|3.3e-1936.51hypothetical protein LR48_Vigan03g027500 [Vigna angularis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g00090.1Cp4.1LG05g00090.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 215..235
scor

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g00090Cucsa.313070Cucumber (Gy14) v1cgycpeB0826
Cp4.1LG05g00090Cla016202Watermelon (97103) v1cpewmB684
Cp4.1LG05g00090Csa3G902250Cucumber (Chinese Long) v2cpecuB717
Cp4.1LG05g00090MELO3C003414Melon (DHL92) v3.5.1cpemeB689
Cp4.1LG05g00090ClCG09G011900Watermelon (Charleston Gray)cpewcgB625
Cp4.1LG05g00090CSPI03G46670Wild cucumber (PI 183967)cpecpiB719
Cp4.1LG05g00090LsiUNG000380Bottle gourd (USVL1VR-Ls)cpelsiB576
Cp4.1LG05g00090MELO3C003414.2Melon (DHL92) v3.6.1cpemedB821
Cp4.1LG05g00090CsaV3_3G049130Cucumber (Chinese Long) v3cpecucB0894
Cp4.1LG05g00090Bhi05G000332Wax gourdcpewgoB0930
Cp4.1LG05g00090CsGy3G044110Cucumber (Gy14) v2cgybcpeB425
Cp4.1LG05g00090Carg08841Silver-seed gourdcarcpeB1099
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g00090Cucumber (Chinese Long) v3cpecucB0895
Cp4.1LG05g00090Cucurbita pepo (Zucchini)cpecpeB248
Cp4.1LG05g00090Cucurbita pepo (Zucchini)cpecpeB273
Cp4.1LG05g00090Cucurbita pepo (Zucchini)cpecpeB279
Cp4.1LG05g00090Cucurbita pepo (Zucchini)cpecpeB509
Cp4.1LG05g00090Cucumber (Gy14) v1cgycpeB0853
Cp4.1LG05g00090Cucurbita maxima (Rimu)cmacpeB360
Cp4.1LG05g00090Cucurbita maxima (Rimu)cmacpeB543
Cp4.1LG05g00090Cucurbita maxima (Rimu)cmacpeB647
Cp4.1LG05g00090Cucurbita maxima (Rimu)cmacpeB842
Cp4.1LG05g00090Cucurbita moschata (Rifu)cmocpeB324
Cp4.1LG05g00090Cucurbita moschata (Rifu)cmocpeB498
Cp4.1LG05g00090Cucurbita moschata (Rifu)cmocpeB596
Cp4.1LG05g00090Cucurbita moschata (Rifu)cmocpeB790
Cp4.1LG05g00090Wild cucumber (PI 183967)cpecpiB720
Cp4.1LG05g00090Cucumber (Chinese Long) v2cpecuB718
Cp4.1LG05g00090Bottle gourd (USVL1VR-Ls)cpelsiB630
Cp4.1LG05g00090Watermelon (Charleston Gray)cpewcgB631
Cp4.1LG05g00090Watermelon (97103) v1cpewmB692
Cp4.1LG05g00090Melon (DHL92) v3.5.1cpemeB700
Cp4.1LG05g00090Cucumber (Gy14) v2cgybcpeB426
Cp4.1LG05g00090Melon (DHL92) v3.6.1cpemedB830
Cp4.1LG05g00090Silver-seed gourdcarcpeB0704
Cp4.1LG05g00090Silver-seed gourdcarcpeB1336
Cp4.1LG05g00090Silver-seed gourdcarcpeB1346