Cp4.1LG04g16330 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG04g16330
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionSterile alpha motif domain-containing protein, putative
LocationCp4.1LG04 : 12652828 .. 12653766 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGATGTTCAACCCCCCGACGCCCAGATGAACGGCGGTCCTGCCCCTCTCGTCGTCTCCTCCGAAACCGTTGGATCCAAACGCCAGCGAAGGCCTAGCGTCCGATTGGGGGATATCGGCGGCGACCAGCCCTACGATTCCCATGCTCGCCGCACGAATAAGCCCTGGAAGTTTGGTTTGGAAAATCGCAAGGACGCCGCTGTCTCTGCCAAGAACTCTAAAACTCGTCCCTTGACCAACTTGAGCTCGGCCGGGGAATTTCAGGAGACCATAGATGGCGAAGACAAAGAGAACAATTTGGATAGTGTTGCAATTGGGAGCTGGAGGTTAAAGGATTCGAAGCGGAGAGCCTCCGCGGGCACCAAGAGGGTGAGGACTAATTGGGTGTCCTCGAAGCACGACGAAGGCGGAGGAGGTGGGGAACGGGAAGGCGATGAAAAGTACAGCGGGGGGGAGGATGTGGATGAGGGGTATCGGGATTACGAGATTGAGAACTCGGAAAGTCCGTTGAAAGAGCAGAGCTCAATGCATTCGCTTGAGAATTTGGGGATAGAAGGTCAGGGGAACGAAAGGGAGATGCTTTATCAGGGGAATAGAAGATGTATCCGGTCTAGGGTTTCGGAGGGCAGGGAGCAGCAAGAAGGGCTGGAATTTTCAGGGCCTTCGGATACGGACGCGAGGAATTGGAAATGCGGGACTAGCGGTGATAGGAATGGGAATGGTGGGAGAGGAGTATGTGGGGAAGACGGGGTTAGACTTTGGCTCAACGGCTTAGGGTTAGGTCGGTATGCTCCAGTTTTTGAAATTCACGAGGTGGACGATGAGGTTTTGCCAATGTTGACACTCGAGGATCTCAAGGATATGGGAATAACTGCAGTTGGGTCCCGGAGAAAAATGTACTGCGCAATCCAGAAGTTAGGGAAGGGATTTTCATAG

mRNA sequence

ATGGCAGATGTTCAACCCCCCGACGCCCAGATGAACGGCGGTCCTGCCCCTCTCGTCGTCTCCTCCGAAACCGTTGGATCCAAACGCCAGCGAAGGCCTAGCGTCCGATTGGGGGATATCGGCGGCGACCAGCCCTACGATTCCCATGCTCGCCGCACGAATAAGCCCTGGAAGTTTGGTTTGGAAAATCGCAAGGACGCCGCTGTCTCTGCCAAGAACTCTAAAACTCGTCCCTTGACCAACTTGAGCTCGGCCGGGGAATTTCAGGAGACCATAGATGGCGAAGACAAAGAGAACAATTTGGATAGTGTTGCAATTGGGAGCTGGAGGTTAAAGGATTCGAAGCGGAGAGCCTCCGCGGGCACCAAGAGGGTGAGGACTAATTGGGTGTCCTCGAAGCACGACGAAGGCGGAGGAGGTGGGGAACGGGAAGGCGATGAAAAGTACAGCGGGGGGGAGGATGTGGATGAGGGGTATCGGGATTACGAGATTGAGAACTCGGAAAGTCCGTTGAAAGAGCAGAGCTCAATGCATTCGCTTGAGAATTTGGGGATAGAAGGTCAGGGGAACGAAAGGGAGATGCTTTATCAGGGGAATAGAAGATGTATCCGGTCTAGGGTTTCGGAGGGCAGGGAGCAGCAAGAAGGGCTGGAATTTTCAGGGCCTTCGGATACGGACGCGAGGAATTGGAAATGCGGGACTAGCGGTGATAGGAATGGGAATGGTGGGAGAGGAGTATGTGGGGAAGACGGGGTTAGACTTTGGCTCAACGGCTTAGGGTTAGGTCGGTATGCTCCAGTTTTTGAAATTCACGAGGTGGACGATGAGGTTTTGCCAATGTTGACACTCGAGGATCTCAAGGATATGGGAATAACTGCAGTTGGGTCCCGGAGAAAAATGTACTGCGCAATCCAGAAGTTAGGGAAGGGATTTTCATAG

Coding sequence (CDS)

ATGGCAGATGTTCAACCCCCCGACGCCCAGATGAACGGCGGTCCTGCCCCTCTCGTCGTCTCCTCCGAAACCGTTGGATCCAAACGCCAGCGAAGGCCTAGCGTCCGATTGGGGGATATCGGCGGCGACCAGCCCTACGATTCCCATGCTCGCCGCACGAATAAGCCCTGGAAGTTTGGTTTGGAAAATCGCAAGGACGCCGCTGTCTCTGCCAAGAACTCTAAAACTCGTCCCTTGACCAACTTGAGCTCGGCCGGGGAATTTCAGGAGACCATAGATGGCGAAGACAAAGAGAACAATTTGGATAGTGTTGCAATTGGGAGCTGGAGGTTAAAGGATTCGAAGCGGAGAGCCTCCGCGGGCACCAAGAGGGTGAGGACTAATTGGGTGTCCTCGAAGCACGACGAAGGCGGAGGAGGTGGGGAACGGGAAGGCGATGAAAAGTACAGCGGGGGGGAGGATGTGGATGAGGGGTATCGGGATTACGAGATTGAGAACTCGGAAAGTCCGTTGAAAGAGCAGAGCTCAATGCATTCGCTTGAGAATTTGGGGATAGAAGGTCAGGGGAACGAAAGGGAGATGCTTTATCAGGGGAATAGAAGATGTATCCGGTCTAGGGTTTCGGAGGGCAGGGAGCAGCAAGAAGGGCTGGAATTTTCAGGGCCTTCGGATACGGACGCGAGGAATTGGAAATGCGGGACTAGCGGTGATAGGAATGGGAATGGTGGGAGAGGAGTATGTGGGGAAGACGGGGTTAGACTTTGGCTCAACGGCTTAGGGTTAGGTCGGTATGCTCCAGTTTTTGAAATTCACGAGGTGGACGATGAGGTTTTGCCAATGTTGACACTCGAGGATCTCAAGGATATGGGAATAACTGCAGTTGGGTCCCGGAGAAAAATGTACTGCGCAATCCAGAAGTTAGGGAAGGGATTTTCATAG

Protein sequence

MADVQPPDAQMNGGPAPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSHARRTNKPWKFGLENRKDAAVSAKNSKTRPLTNLSSAGEFQETIDGEDKENNLDSVAIGSWRLKDSKRRASAGTKRVRTNWVSSKHDEGGGGGEREGDEKYSGGEDVDEGYRDYEIENSESPLKEQSSMHSLENLGIEGQGNEREMLYQGNRRCIRSRVSEGREQQEGLEFSGPSDTDARNWKCGTSGDRNGNGGRGVCGEDGVRLWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSRRKMYCAIQKLGKGFS
BLAST of Cp4.1LG04g16330 vs. Swiss-Prot
Match: BICC1_MOUSE (Protein bicaudal C homolog 1 OS=Mus musculus GN=Bicc1 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.5e-07
Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = 1

Query: 259 LGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSRRKMYCAIQKLGK 310
           LGLG+Y  VF+  E+D +    LT +DLK++GIT  G+RRKM  AI +L K
Sbjct: 887 LGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELSK 937

BLAST of Cp4.1LG04g16330 vs. Swiss-Prot
Match: BICC1_HUMAN (Protein bicaudal C homolog 1 OS=Homo sapiens GN=BICC1 PE=1 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 9.5e-07
Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = 1

Query: 259 LGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSRRKMYCAIQKLGK 310
           LGLG+Y  VF+  E+D +    LT +DLK++GIT  G+RRKM  AI +L K
Sbjct: 885 LGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNK 935

BLAST of Cp4.1LG04g16330 vs. Swiss-Prot
Match: BIC1A_XENLA (Protein bicaudal C homolog 1-A OS=Xenopus laevis GN=bicc1-a PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.6e-06
Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 1

Query: 259 LGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSRRKMYCAIQKLGK 310
           LGLG+Y  +F+  E+D +    LT +DLK++GI+  G+RRKM  AI +L K
Sbjct: 874 LGLGKYTDIFQQQEIDLQTFLTLTDQDLKELGISTFGARRKMLLAISELNK 924

BLAST of Cp4.1LG04g16330 vs. TrEMBL
Match: E5GBM6_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 7.8e-149
Identity = 272/313 (86.90%), Postives = 287/313 (91.69%), Query Frame = 1

Query: 1   MADVQPPDAQMNGGPAPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSHARRTNKPWKFG 60
           MAD+QPPD Q+NG P PLVVSSETVGSKRQRRPSVRLGDIGGDQPYDS+ RRTNKPWKF 
Sbjct: 1   MADIQPPDPQINGAPPPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYPRRTNKPWKFS 60

Query: 61  LENRKDA-AVSAKNSKTRPLTNLSSAGEFQETIDGEDKENNLDSVAIGSWRLKDSKRRAS 120
           L+NRKD+ A +AKNSKTRPLTN SSA       D EDKENNLD+VAIGSWRLKDSKRR S
Sbjct: 61  LDNRKDSSAATAKNSKTRPLTNFSSA-------DAEDKENNLDTVAIGSWRLKDSKRRGS 120

Query: 121 AGTKRVRTNWVSSKHDEGGGGGEREGDEKYSGGEDVDEGYRDYEIENSESPLKEQSSMHS 180
           A TKR RTNWVSSKHDEGGGGGE   DEKYS GEDVDEGYRDY+IENSESPLKEQSSMHS
Sbjct: 121 AATKRARTNWVSSKHDEGGGGGE--ADEKYSAGEDVDEGYRDYDIENSESPLKEQSSMHS 180

Query: 181 LENLGIEGQGNEREMLYQGNRRCIRSRVSEGREQQEGLEFSGPSDTDARNWKCGTSGDRN 240
           LENL +EGQGN+REMLYQGNRR IRSRVSEGR+ QEGLEFSGPSDTDARNWKCGTSGDRN
Sbjct: 181 LENLAMEGQGNDREMLYQGNRRSIRSRVSEGRDHQEGLEFSGPSDTDARNWKCGTSGDRN 240

Query: 241 GNGGRGVCGEDGVRLWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSRRK 300
           GNGGRG+CGEDGVR+WLNGLGLGRYAP+FEIHEVDDEVLPMLTLEDLKDMGI+AVGSRRK
Sbjct: 241 GNGGRGLCGEDGVRVWLNGLGLGRYAPIFEIHEVDDEVLPMLTLEDLKDMGISAVGSRRK 300

Query: 301 MYCAIQKLGKGFS 313
           MYCAIQKLGKGFS
Sbjct: 301 MYCAIQKLGKGFS 304

BLAST of Cp4.1LG04g16330 vs. TrEMBL
Match: A0A0A0LRM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000710 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 2.3e-148
Identity = 271/313 (86.58%), Postives = 286/313 (91.37%), Query Frame = 1

Query: 1   MADVQPPDAQMNGGPAPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSHARRTNKPWKFG 60
           MAD+QPPD Q+NG P PLVVSSETVGSKRQRRPSVRLGDIGGDQPYDS+ RRTNKPWKF 
Sbjct: 1   MADIQPPDPQINGAPPPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYPRRTNKPWKFS 60

Query: 61  LENRKDA-AVSAKNSKTRPLTNLSSAGEFQETIDGEDKENNLDSVAIGSWRLKDSKRRAS 120
           LENRKD+ A +AKNSKTRPLTN SSA       D EDKENNLD+VAIGSWRLKDSKRR S
Sbjct: 61  LENRKDSSAATAKNSKTRPLTNFSSA-------DAEDKENNLDTVAIGSWRLKDSKRRGS 120

Query: 121 AGTKRVRTNWVSSKHDEGGGGGEREGDEKYSGGEDVDEGYRDYEIENSESPLKEQSSMHS 180
           A TKR RTNW SSKHDEGGGGGE   D+KYS GEDVDEGYRDY+IENSESPLKEQSSMHS
Sbjct: 121 AATKRARTNWASSKHDEGGGGGE--ADDKYSAGEDVDEGYRDYDIENSESPLKEQSSMHS 180

Query: 181 LENLGIEGQGNEREMLYQGNRRCIRSRVSEGREQQEGLEFSGPSDTDARNWKCGTSGDRN 240
           LENL +EGQGN+REMLYQGNRR IRSRVSEGR+ QEGLEFSGPSDTDARNWKCGTSGDRN
Sbjct: 181 LENLAMEGQGNDREMLYQGNRRSIRSRVSEGRDHQEGLEFSGPSDTDARNWKCGTSGDRN 240

Query: 241 GNGGRGVCGEDGVRLWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSRRK 300
           GNGGRG+CGEDGVR+WLNGLGLGRYAP+FEIHEVDDEVLPMLTLEDLKDMGI+AVGSRRK
Sbjct: 241 GNGGRGLCGEDGVRVWLNGLGLGRYAPIFEIHEVDDEVLPMLTLEDLKDMGISAVGSRRK 300

Query: 301 MYCAIQKLGKGFS 313
           MYCAIQKLGKGFS
Sbjct: 301 MYCAIQKLGKGFS 304

BLAST of Cp4.1LG04g16330 vs. TrEMBL
Match: W9RHC5_9ROSA (Protein bicaudal C-1-like protein OS=Morus notabilis GN=L484_008845 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 8.4e-111
Identity = 220/340 (64.71%), Postives = 261/340 (76.76%), Query Frame = 1

Query: 1   MADVQPPDAQMNGGP---------------APLVVSSETVGSKRQRRPSVRLGDIGGDQP 60
           MA++QPP+AQ+NGG                A L+  SETVGSKRQRRPSVRLGDIGGDQP
Sbjct: 1   MAEIQPPEAQINGGGGVGGAVSGGVGGGGGAMLMGPSETVGSKRQRRPSVRLGDIGGDQP 60

Query: 61  YDSHARRTNKPWKFGLENRKDAAVS----AKNSKTRPLTNLSSAGEFQETIDGEDKE--- 120
           YDSH RRT+K WK  +E+   +  +    AK SKTRPL N SS G+  + +D +++E   
Sbjct: 61  YDSHVRRTSKQWKLPIEHHHHSQRTNRDFAKTSKTRPLINFSSGGDALDALDLDEREIRD 120

Query: 121 NNLDSVAIGSWRLKDSKRRASAGTKRVRTNWVSSKHDEGGGGGE----REGDEKYSGGED 180
            NL+++AIGSW+LKDSK+R S  TKR+R+NW+S K D+GGGGG      EGDEKYS GED
Sbjct: 121 ANLETMAIGSWKLKDSKKRGSISTKRIRSNWISPKLDDGGGGGADTGGAEGDEKYSAGED 180

Query: 181 VDEGYRDYEIENSESPLKEQSSMHSLENLGIEGQG--NEREMLYQGNRRCIRSRVSEGRE 240
           VD+G RD+++ENSESPLKEQS +HSLENL ++G G  NERE+LY GNRR IR+RVS+  +
Sbjct: 181 VDDGNRDFDVENSESPLKEQSPIHSLENLAVDGHGIGNEREVLYHGNRRQIRARVSDNHD 240

Query: 241 QQEGLEFSGPSDTDARNWKCGTSGDRNGNGGRGVCGEDGVRLWLNGLGLGRYAPVFEIHE 300
              G+E SGPSD +AR WKCG   DRNGNGGR  C EDGVR+WLNGLGLGRYAPVFE+HE
Sbjct: 241 ---GMELSGPSDNEAREWKCG---DRNGNGGRARCEEDGVRVWLNGLGLGRYAPVFEVHE 300

Query: 301 VDDEVLPMLTLEDLKDMGITAVGSRRKMYCAIQKLGKGFS 313
           VDDEVLPMLTLEDLKDMGI AVGSRRKM+CAIQKLGKGFS
Sbjct: 301 VDDEVLPMLTLEDLKDMGINAVGSRRKMFCAIQKLGKGFS 334

BLAST of Cp4.1LG04g16330 vs. TrEMBL
Match: M5WEK2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa023714mg PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 3.8e-103
Identity = 195/277 (70.40%), Postives = 235/277 (84.84%), Query Frame = 1

Query: 1   MADVQPPDAQMNGGPAPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSHARRTNKPWKFG 60
           MA++ PP  Q+NGG   ++ SSETVGSKRQRRPSVRLGDIGGDQPYDSH RRT K WK  
Sbjct: 1   MAEIPPPMGQINGGQL-MLGSSETVGSKRQRRPSVRLGDIGGDQPYDSHVRRTTKQWKLP 60

Query: 61  LENRKDAAVSAKNSKTRPLTNLSSAGEFQETIDGEDKENNLDSVAIGSWRLKDSKRRASA 120
           L++RKD   S K+SKTRPLTNLS+  +FQET+DGED+E NLDSVAIGSW++KD+K+RAS 
Sbjct: 61  LDHRKD---SNKSSKTRPLTNLSAGADFQETLDGEDREGNLDSVAIGSWKVKDTKKRAS- 120

Query: 121 GTKRVRTNWVSSKHDEGGGGGEREGDEKYSGGEDVDEGYRDYEIENSESPLKEQSSMHSL 180
            TKRVR+NWVSSK DEGG     EGD+K+SGGEDV++GYR +++ENSESPLK+QS +HS 
Sbjct: 121 NTKRVRSNWVSSKIDEGGDAAAAEGDDKFSGGEDVEDGYRVFDVENSESPLKDQSPIHSS 180

Query: 181 ENLGIEGQGNEREMLYQGNRRCIRSRVSEGREQQEGLEFSGPSDTDARNWKC-GTSGDRN 240
           +NLG++G  NER++LY G+RR +R+RVSEGR+  +G+E SGPSD DAR+W C GTSGDRN
Sbjct: 181 DNLGVDGHLNERDVLYHGSRRPMRTRVSEGRDHHDGVELSGPSDNDARDWNCRGTSGDRN 240

Query: 241 GNGGRGVCGEDGVRLWLNGLGLGRYAPVFEIHEVDDE 277
           GN GRG CGEDGVR+WLNGLGLGRYAP+FEIHEVDDE
Sbjct: 241 GNEGRGTCGEDGVRVWLNGLGLGRYAPMFEIHEVDDE 272

BLAST of Cp4.1LG04g16330 vs. TrEMBL
Match: A0A067JFD7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26388 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 2.1e-101
Identity = 220/335 (65.67%), Postives = 257/335 (76.72%), Query Frame = 1

Query: 1   MADVQPPDAQMNGGP-----------APLVV-SSETVGSKRQRRPSVRLGDIGGDQPYDS 60
           MAD+QPP+  +NGG            AP+ V SSETVGSKRQRRPSVRLG+IGGDQ YD+
Sbjct: 1   MADIQPPEGHLNGGSVGGVSVDRGVGAPIAVTSSETVGSKRQRRPSVRLGEIGGDQLYDT 60

Query: 61  HARRT--NKPWK----FGLENRKDAAVSAKNSKTRPLTNLSSAGEFQETIDGEDKENNLD 120
           H RRT  NK WK      L+++KD   S K SKTR LTNL+++GEF ET+D EDKE NLD
Sbjct: 61  HPRRTSNNKQWKHHQLLSLDHKKDPNSSNKGSKTRALTNLTTSGEFAETLD-EDKEVNLD 120

Query: 121 SVAIGSWRLKDSKRRAS-AGTKRVRTNWVSSKHDEGGGGGER---EGDEKYSGGEDVDEG 180
           S+AIGSWR+KDSK+RAS A TKRVR+NWVS K D+GGGGG     EGDEKYSGGEDVD+ 
Sbjct: 121 SIAIGSWRVKDSKKRASNATTKRVRSNWVS-KIDDGGGGGSHNNVEGDEKYSGGEDVDDT 180

Query: 181 YRDYEIENSESPLKEQSSMHSLENLGIEGQGNEREMLYQGNRRCIRSRVSEGREQ-QEGL 240
           YR++++ENS+SPLKEQS +HSLENLG   + NEREM Y  NRR IR+R +    +  +G+
Sbjct: 181 YREFDMENSDSPLKEQSPVHSLENLGDGNERNEREMYY--NRRTIRARDNHNHNRLHDGV 240

Query: 241 EFSGPSDTDARNWKCGTSGDRNGNGGRGVCGEDGVRLWLNGLGLGRYAPVFEIHEVDDEV 300
           E SGPSDTDAR+++       NG  G G  GEDGVR+WLN +GLGRYAP FEIHEVDDEV
Sbjct: 241 ELSGPSDTDARDYR------NNGRCGGG--GEDGVRIWLNSIGLGRYAPFFEIHEVDDEV 300

Query: 301 LPMLTLEDLKDMGITAVGSRRKMYCAIQKLGKGFS 313
           LPMLTLEDLKDMGI AVGSRRKM+CAIQKLGKGFS
Sbjct: 301 LPMLTLEDLKDMGIKAVGSRRKMFCAIQKLGKGFS 323

BLAST of Cp4.1LG04g16330 vs. TAIR10
Match: AT3G48800.1 (AT3G48800.1 Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 214.5 bits (545), Expect = 9.0e-56
Identity = 151/332 (45.48%), Postives = 192/332 (57.83%), Query Frame = 1

Query: 1   MADVQPPDAQM-NGGPAPLVVSSET-------VGSKRQRRPSVRLGDIGGDQ-------- 60
           MA++QP D Q  NGG   +  S+          GSKR RRPSVRLG+IGGDQ        
Sbjct: 1   MAELQPVDGQQTNGGVVTIPASTSAEATAIAAAGSKRLRRPSVRLGEIGGDQYQQQHHHH 60

Query: 61  ----PYDSHARRTNKPWKFGLENRKDAAVSAKNSKTRPLTNLSSAGEFQETIDGEDKENN 120
                YDS  R++         NRKD   ++K+S+TR LTNLSS  E   T+D E +E N
Sbjct: 61  AAAAAYDSQGRKSKWTPTTTSGNRKD---TSKSSRTRTLTNLSSGYENIGTLDDE-REGN 120

Query: 121 LDSVAIGSWRLKDSKRRASAGTKRVRTNWVSSKHDEGGGGGEREGDEKYSGGEDVDEGYR 180
           +DS  +GSWR+K  +  +SA  KRVR+NWVS   D         GDEK SGGE+++ G+R
Sbjct: 121 VDSFGVGSWRVK-KRVGSSAAAKRVRSNWVSKVGD---------GDEKISGGEELEGGFR 180

Query: 181 DYEIENSESPLKEQSSMHSLENLGIEGQGNEREMLYQGNRRCIRSRVSEGREQQEGLEFS 240
           D+  E+SESP+KE       E+L  +G G      + G RR   +  S  RE +      
Sbjct: 181 DFSREDSESPIKE-------ESLDRDGGG------FYGRRRYESNNSSGNREFES----- 240

Query: 241 GPSDTDARNWKCGTSGDRNGNGGRGVCGEDGVRLWLNGLGLGRYAPVFEIHEVDDEVLPM 300
                             N +GG    G++GV++WL  LGLGRY P+FEIHEVD+EVLP+
Sbjct: 241 ------------------NMDGG----GKEGVKIWLQELGLGRYWPMFEIHEVDEEVLPL 278

Query: 301 LTLEDLKDMGITAVGSRRKMYCAIQKLGKGFS 313
           LTLEDLKDMGI AVGSRRKM+CAIQKLG+ FS
Sbjct: 301 LTLEDLKDMGINAVGSRRKMFCAIQKLGREFS 278

BLAST of Cp4.1LG04g16330 vs. TAIR10
Match: AT5G23680.1 (AT5G23680.1 Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 144.4 bits (363), Expect = 1.1e-34
Identity = 135/351 (38.46%), Postives = 175/351 (49.86%), Query Frame = 1

Query: 1   MADVQPPDA-QMNGG--PAPLVVSSE----------TVGSKRQRRPSVRLGDIGGDQ--- 60
           MA++Q  +  Q+NGG  P  ++ S E          +VGSKR RRPSVRLGDIGGDQ   
Sbjct: 1   MAELQLVEGHQINGGFIPPAIINSIEAPETSAAAGVSVGSKRLRRPSVRLGDIGGDQYHQ 60

Query: 61  ----PYDSHARRTNKPWK------FGLENRKD----AAVSAKNSKTRPLTNLSSAG-EFQ 120
                YDS   R  K W+       G  NRK+    +  +  +S+TR +TNLSS G E  
Sbjct: 61  HVVAAYDSPQVRRPK-WRPSGGGGGGGGNRKEPNNQSGKTTSSSRTRTMTNLSSGGYENT 120

Query: 121 ETIDGEDKENNLDSVAIGSWRLKDSKRRASAGTKRVRTNWVSSKHDEGGGGGEREGDEKY 180
            T+D        D V+IGSWR+K                WV S                 
Sbjct: 121 GTLDE-------DPVSIGSWRVK---------------KWVKS----------------- 180

Query: 181 SGGEDVDEGYRDYEIENSESPLKEQSSMHSLENLGIEGQGNEREMLYQGNRRCIRSRVSE 240
           SGGE             + +  K   S  +  N G+E QG+E+   + G          E
Sbjct: 181 SGGETAAT------TTTNTASAKRVRSNWATRNDGVE-QGDEK---FSGEEE--EEEEDE 240

Query: 241 GREQQEGLEFSGPSDTDA--------RNWKCGTSGDRNGNGGRGVCGEDGVRLWLNGLGL 300
               +EG       D+++         N +    GD   +GGRG   ++GV++WL  LGL
Sbjct: 241 ELGGEEGFRDFSREDSESPMKERRRYENREVELLGDWQ-SGGRG---KEGVKIWLQELGL 295

Query: 301 GRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSRRKMYCAIQKLGKGFS 313
           GRY P+FE+HEVD++VLP+LTLEDLKDMGI AVGSRRKMYCAIQKLG+ FS
Sbjct: 301 GRYWPMFEMHEVDEQVLPLLTLEDLKDMGINAVGSRRKMYCAIQKLGREFS 295

BLAST of Cp4.1LG04g16330 vs. TAIR10
Match: AT2G45700.1 (AT2G45700.1 sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 49.7 bits (117), Expect = 3.9e-06
Identity = 24/58 (41.38%), Postives = 35/58 (60.34%), Query Frame = 1

Query: 255 WLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSRRKMYCAIQKLGKGFS 313
           WL  LGL +Y  VF   E+D + L  LT EDL  +GIT++G R+K+  A+  +   F+
Sbjct: 247 WLRSLGLAKYEDVFIREEIDWDTLQSLTEEDLLSIGITSLGPRKKIVNALSGVRDPFA 304

BLAST of Cp4.1LG04g16330 vs. NCBI nr
Match: gi|659128810|ref|XP_008464381.1| (PREDICTED: uncharacterized protein LOC103502284 [Cucumis melo])

HSP 1 Score: 534.6 bits (1376), Expect = 1.1e-148
Identity = 272/313 (86.90%), Postives = 287/313 (91.69%), Query Frame = 1

Query: 1   MADVQPPDAQMNGGPAPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSHARRTNKPWKFG 60
           MAD+QPPD Q+NG P PLVVSSETVGSKRQRRPSVRLGDIGGDQPYDS+ RRTNKPWKF 
Sbjct: 1   MADIQPPDPQINGAPPPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYPRRTNKPWKFS 60

Query: 61  LENRKDA-AVSAKNSKTRPLTNLSSAGEFQETIDGEDKENNLDSVAIGSWRLKDSKRRAS 120
           L+NRKD+ A +AKNSKTRPLTN SSA       D EDKENNLD+VAIGSWRLKDSKRR S
Sbjct: 61  LDNRKDSSAATAKNSKTRPLTNFSSA-------DAEDKENNLDTVAIGSWRLKDSKRRGS 120

Query: 121 AGTKRVRTNWVSSKHDEGGGGGEREGDEKYSGGEDVDEGYRDYEIENSESPLKEQSSMHS 180
           A TKR RTNWVSSKHDEGGGGGE   DEKYS GEDVDEGYRDY+IENSESPLKEQSSMHS
Sbjct: 121 AATKRARTNWVSSKHDEGGGGGE--ADEKYSAGEDVDEGYRDYDIENSESPLKEQSSMHS 180

Query: 181 LENLGIEGQGNEREMLYQGNRRCIRSRVSEGREQQEGLEFSGPSDTDARNWKCGTSGDRN 240
           LENL +EGQGN+REMLYQGNRR IRSRVSEGR+ QEGLEFSGPSDTDARNWKCGTSGDRN
Sbjct: 181 LENLAMEGQGNDREMLYQGNRRSIRSRVSEGRDHQEGLEFSGPSDTDARNWKCGTSGDRN 240

Query: 241 GNGGRGVCGEDGVRLWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSRRK 300
           GNGGRG+CGEDGVR+WLNGLGLGRYAP+FEIHEVDDEVLPMLTLEDLKDMGI+AVGSRRK
Sbjct: 241 GNGGRGLCGEDGVRVWLNGLGLGRYAPIFEIHEVDDEVLPMLTLEDLKDMGISAVGSRRK 300

Query: 301 MYCAIQKLGKGFS 313
           MYCAIQKLGKGFS
Sbjct: 301 MYCAIQKLGKGFS 304

BLAST of Cp4.1LG04g16330 vs. NCBI nr
Match: gi|778655234|ref|XP_011649522.1| (PREDICTED: uncharacterized protein LOC101208783 [Cucumis sativus])

HSP 1 Score: 533.1 bits (1372), Expect = 3.3e-148
Identity = 271/313 (86.58%), Postives = 286/313 (91.37%), Query Frame = 1

Query: 1   MADVQPPDAQMNGGPAPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSHARRTNKPWKFG 60
           MAD+QPPD Q+NG P PLVVSSETVGSKRQRRPSVRLGDIGGDQPYDS+ RRTNKPWKF 
Sbjct: 1   MADIQPPDPQINGAPPPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYPRRTNKPWKFS 60

Query: 61  LENRKDA-AVSAKNSKTRPLTNLSSAGEFQETIDGEDKENNLDSVAIGSWRLKDSKRRAS 120
           LENRKD+ A +AKNSKTRPLTN SSA       D EDKENNLD+VAIGSWRLKDSKRR S
Sbjct: 61  LENRKDSSAATAKNSKTRPLTNFSSA-------DAEDKENNLDTVAIGSWRLKDSKRRGS 120

Query: 121 AGTKRVRTNWVSSKHDEGGGGGEREGDEKYSGGEDVDEGYRDYEIENSESPLKEQSSMHS 180
           A TKR RTNW SSKHDEGGGGGE   D+KYS GEDVDEGYRDY+IENSESPLKEQSSMHS
Sbjct: 121 AATKRARTNWASSKHDEGGGGGE--ADDKYSAGEDVDEGYRDYDIENSESPLKEQSSMHS 180

Query: 181 LENLGIEGQGNEREMLYQGNRRCIRSRVSEGREQQEGLEFSGPSDTDARNWKCGTSGDRN 240
           LENL +EGQGN+REMLYQGNRR IRSRVSEGR+ QEGLEFSGPSDTDARNWKCGTSGDRN
Sbjct: 181 LENLAMEGQGNDREMLYQGNRRSIRSRVSEGRDHQEGLEFSGPSDTDARNWKCGTSGDRN 240

Query: 241 GNGGRGVCGEDGVRLWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSRRK 300
           GNGGRG+CGEDGVR+WLNGLGLGRYAP+FEIHEVDDEVLPMLTLEDLKDMGI+AVGSRRK
Sbjct: 241 GNGGRGLCGEDGVRVWLNGLGLGRYAPIFEIHEVDDEVLPMLTLEDLKDMGISAVGSRRK 300

Query: 301 MYCAIQKLGKGFS 313
           MYCAIQKLGKGFS
Sbjct: 301 MYCAIQKLGKGFS 304

BLAST of Cp4.1LG04g16330 vs. NCBI nr
Match: gi|645268464|ref|XP_008239539.1| (PREDICTED: uncharacterized protein LOC103338131 [Prunus mume])

HSP 1 Score: 454.9 bits (1169), Expect = 1.1e-124
Identity = 231/313 (73.80%), Postives = 271/313 (86.58%), Query Frame = 1

Query: 1   MADVQPPDAQMNGGPAPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSHARRTNKPWKFG 60
           MA++ PP  Q+NGG   ++ SSETVGSKRQRRPSVRLGDIGGDQPYDSH RRT K WK  
Sbjct: 1   MAEIPPPMGQINGGQL-MLGSSETVGSKRQRRPSVRLGDIGGDQPYDSHVRRTTKQWKLP 60

Query: 61  LENRKDAAVSAKNSKTRPLTNLSSAGEFQETIDGEDKENNLDSVAIGSWRLKDSKRRASA 120
           L++RKD   S K+SKTRPLTNLS+  +FQET+DGED+E NLDSVAIGSW++KD+K+RAS 
Sbjct: 61  LDHRKD---SNKSSKTRPLTNLSAGADFQETLDGEDREGNLDSVAIGSWKVKDTKKRAS- 120

Query: 121 GTKRVRTNWVSSKHDEGGGGGEREGDEKYSGGEDVDEGYRDYEIENSESPLKEQSSMHSL 180
            TKRVR+NWVSSK DEGG     EGD+K+SGGEDV++GYRD+++ENSESPLK+QS +HS 
Sbjct: 121 NTKRVRSNWVSSKIDEGGDAAAAEGDDKFSGGEDVEDGYRDFDVENSESPLKDQSPLHSS 180

Query: 181 ENLGIEGQGNEREMLYQGNRRCIRSRVSEGREQQEGLEFSGPSDTDARNWKC-GTSGDRN 240
           +NLG++G  NER++LY G+RR IR+RVSEGR+  +G+E SGPSD DAR+W C GTSGDRN
Sbjct: 181 DNLGVDGHLNERDVLYHGSRRPIRTRVSEGRDHHDGVELSGPSDNDARDWNCRGTSGDRN 240

Query: 241 GNGGRGVCGEDGVRLWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSRRK 300
           GN GRG CGEDGVR+WLNGLGLGRYAP+FEIHEVDDEVLPMLTLEDLKDMGI AVG+RRK
Sbjct: 241 GNEGRGRCGEDGVRVWLNGLGLGRYAPMFEIHEVDDEVLPMLTLEDLKDMGINAVGTRRK 300

Query: 301 MYCAIQKLGKGFS 313
           MYCAIQKLGKGFS
Sbjct: 301 MYCAIQKLGKGFS 308

BLAST of Cp4.1LG04g16330 vs. NCBI nr
Match: gi|694385936|ref|XP_009368780.1| (PREDICTED: uncharacterized protein LOC103958261 [Pyrus x bretschneideri])

HSP 1 Score: 447.6 bits (1150), Expect = 1.8e-122
Identity = 237/315 (75.24%), Postives = 271/315 (86.03%), Query Frame = 1

Query: 1   MADVQP-PDAQMNGGPAPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSHARRTNKPWKF 60
           MA++QP P +Q+NGG   L+ SSETVGSKRQRRPSVRLGDIGGDQPYDS  RR  K WKF
Sbjct: 1   MAEIQPQPVSQINGGGQFLMGSSETVGSKRQRRPSVRLGDIGGDQPYDSQVRRATKQWKF 60

Query: 61  GLENRKDAAVSAKNSKTRPLTNLSSAGEFQETIDGEDKENNLDSVAIGSWRLKDSKRRAS 120
             ++RKDA    K+SK RPLTNLSS GEF ET+DGED+E NLDSVAIGSW++KD+K+RAS
Sbjct: 61  PPDHRKDAN---KSSKIRPLTNLSSVGEFHETLDGEDREGNLDSVAIGSWKVKDAKKRAS 120

Query: 121 AGTKRVRTNWVSSKHDEGGGGGEREGDEKYSGGEDVDEGY-RDYEIENSESPLKEQSSMH 180
             TKRVR+NWVSSK DEGGGGG  EGDEK+SG EDVDEGY RD+++ENSESPLKEQS + 
Sbjct: 121 NVTKRVRSNWVSSKIDEGGGGG-GEGDEKFSGAEDVDEGYHRDFDVENSESPLKEQSPIL 180

Query: 181 SLENLGIEGQGNEREMLYQGNRRCIRSRVSEGREQQEGLEFSGPSDTDARNWKC-GTSGD 240
           S ENLG++G+ N RE+LY G+RR IR+R+SEGR+  +G+E SGPSDTDAR+W C GTSGD
Sbjct: 181 SSENLGVDGRANGRELLYHGSRRPIRTRISEGRDNHDGIEQSGPSDTDARDWNCRGTSGD 240

Query: 241 RNGNGGRGVCGEDGVRLWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSR 300
           R+ N GR  CGEDGVR+WLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGI+AVGSR
Sbjct: 241 RDENEGRERCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAVGSR 300

Query: 301 RKMYCAIQKLGKGFS 313
           RKMYCAIQKLGKGFS
Sbjct: 301 RKMYCAIQKLGKGFS 311

BLAST of Cp4.1LG04g16330 vs. NCBI nr
Match: gi|694419117|ref|XP_009337527.1| (PREDICTED: uncharacterized protein LOC103929976 [Pyrus x bretschneideri])

HSP 1 Score: 441.0 bits (1133), Expect = 1.7e-120
Identity = 230/315 (73.02%), Postives = 267/315 (84.76%), Query Frame = 1

Query: 1   MADVQP-PDAQMNGGPAPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSHARRTNKPWKF 60
           MA++QP P +++NGG   L+ SSETVGSKRQRRPSVRLGDIGGDQPYDS  RR  KPW+ 
Sbjct: 1   MAEIQPQPVSEINGGGQFLMGSSETVGSKRQRRPSVRLGDIGGDQPYDSQVRRATKPWRL 60

Query: 61  GLENRKDAAVSAKNSKTRPLTNLSSAGEFQETIDGEDKENNLDSVAIGSWRLKDSKRRAS 120
             ++RKDA    K+SK RPLTNLSS GEF ET+DGED+E NLDSVAIGSW++KD+K+RAS
Sbjct: 61  PPDHRKDAN---KSSKPRPLTNLSSVGEFHETLDGEDREANLDSVAIGSWKVKDAKKRAS 120

Query: 121 AGTKRVRTNWVSSKHDEGGGGGEREGDEKYSGGEDVDEGY-RDYEIENSESPLKEQSSMH 180
           + TKRVR+NWVSSK DEGGG    EGDEK+SG EDVD+GY RD+++ENSESPLKE+S +H
Sbjct: 121 SVTKRVRSNWVSSKIDEGGG----EGDEKFSGAEDVDDGYHRDFDVENSESPLKERSPIH 180

Query: 181 SLENLGIEGQGNEREMLYQGNRRCIRSRVSEGREQQEGLEFSGPSDTDARNWKC-GTSGD 240
           S ENLG++G  N RE+LY G+RR I +R+SEGR+  +G+E SGPSD DAR+W C GTSG 
Sbjct: 181 SSENLGVDGHANGRELLYHGSRRPITTRISEGRDNHDGIELSGPSDNDARDWNCRGTSGV 240

Query: 241 RNGNGGRGVCGEDGVRLWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSR 300
           R GN GRG CGEDGVR+WLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMG+ AVGSR
Sbjct: 241 RIGNEGRGRCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGVNAVGSR 300

Query: 301 RKMYCAIQKLGKGFS 313
           RKMYCAIQKLGKGFS
Sbjct: 301 RKMYCAIQKLGKGFS 308

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
BICC1_MOUSE9.5e-0750.98Protein bicaudal C homolog 1 OS=Mus musculus GN=Bicc1 PE=1 SV=1[more]
BICC1_HUMAN9.5e-0750.98Protein bicaudal C homolog 1 OS=Homo sapiens GN=BICC1 PE=1 SV=2[more]
BIC1A_XENLA3.6e-0647.06Protein bicaudal C homolog 1-A OS=Xenopus laevis GN=bicc1-a PE=2 SV=1[more]
Match NameE-valueIdentityDescription
E5GBM6_CUCME7.8e-14986.90Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0LRM8_CUCSA2.3e-14886.58Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000710 PE=4 SV=1[more]
W9RHC5_9ROSA8.4e-11164.71Protein bicaudal C-1-like protein OS=Morus notabilis GN=L484_008845 PE=4 SV=1[more]
M5WEK2_PRUPE3.8e-10370.40Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa023714mg PE=4 S... [more]
A0A067JFD7_JATCU2.1e-10165.67Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26388 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G48800.19.0e-5645.48 Sterile alpha motif (SAM) domain-containing protein[more]
AT5G23680.11.1e-3438.46 Sterile alpha motif (SAM) domain-containing protein[more]
AT2G45700.13.9e-0641.38 sterile alpha motif (SAM) domain-containing protein[more]
Match NameE-valueIdentityDescription
gi|659128810|ref|XP_008464381.1|1.1e-14886.90PREDICTED: uncharacterized protein LOC103502284 [Cucumis melo][more]
gi|778655234|ref|XP_011649522.1|3.3e-14886.58PREDICTED: uncharacterized protein LOC101208783 [Cucumis sativus][more]
gi|645268464|ref|XP_008239539.1|1.1e-12473.80PREDICTED: uncharacterized protein LOC103338131 [Prunus mume][more]
gi|694385936|ref|XP_009368780.1|1.8e-12275.24PREDICTED: uncharacterized protein LOC103958261 [Pyrus x bretschneideri][more]
gi|694419117|ref|XP_009337527.1|1.7e-12073.02PREDICTED: uncharacterized protein LOC103929976 [Pyrus x bretschneideri][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013761SAM/pointed_sf
IPR001660SAM
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g16330.1Cp4.1LG04g16330.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 250..307
score: 4.2
IPR001660Sterile alpha motif domainSMARTSM00454SAM_4coord: 244..310
score: 3.2
IPR001660Sterile alpha motif domainPROFILEPS50105SAM_DOMAINcoord: 250..310
score: 14
IPR013761Sterile alpha motif/pointed domainGENE3DG3DSA:1.10.150.50coord: 249..307
score: 7.1
IPR013761Sterile alpha motif/pointed domainunknownSSF47769SAM/Pointed domaincoord: 249..307
score: 1.15
NoneNo IPR availablePANTHERPTHR10627SCP160coord: 21..199
score: 3.5E-65coord: 216..312
score: 3.5