CmoCh10G000270 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh10G000270
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Sterile alpha motif (SAM) domain-containing protein
Location	Cmo_Chr10 : 148811 .. 149749 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGATATTCAACCCCCCGACCCCCAGATTAACGGCGCCCCTGCCCCTCCCGTCGTCTCCTCCGAAACCGTTGGATCCAAACGCCAGCGAAGACCCAGCGTCCGATTGGGGGATATCGGCGGCGACCAACCCTACGATTCCTATGCCCGCCGCACCAATAAGCCCTGGAAGTTTGCCTCGGATAATCGCAAGGACTCCTCCGCTGCCTCTGCCAAGAACTCCAAAACTCGGCCCTTGACCAACTTGAGGTCGGCGGGGGGTGGGGGGGCCGAATTTCGCGAGACCCCAGAGGGCGAAGACAAAGAGAACAATTTGGATAGCGTTGCAATTGGGAGCTGGAGATTGAAGGATTCCAAGCGGAGAGGCTCAGCCGCCACCAAGAGGGTTAGAACTAATTGGGTATCCCCCAAGCACGACGAAGGCGGCGGAGGGGGGGAGGCAGATGAAAAGTATAGCGCCGGAGAAGACGTGGAGGAGGGGTATCGGGATTACGACGTTGATAACTCGGAAAGTCCCCTGAAAGAACAAAGCTCAATGCATTCGCTTGAGAATTTGGCGATGGAAGGTGAGGGGAAGGAAAGGGAGATGCTTTATCAGGGGAATAGAAGATGTATCCGGTCTAGGGTTTCGGAGGGTAGAGAGCACCAAGATGGGCTCGAGTTTTCAGGGCCTTCGGACACGGATGCCAGGAATTGGAAATGCGGGACTAGCGGTGATAGGAATGGGAATGGTGGGAGAGGAGTAGATGGGGTTAGAGTTTGGCTCAACGGCTTAGGGTTAGGTCGGTATGCTCCAGTTTTTGAAATTCACGAGGTGGACGATGAGGTGTTGCCAATGTTGACACTCGAGGATCTCAAGGATATGGGAATAACTGCAGTTGGGTCCCGGAGAAAAATGTACTCCGCAGTCCAGAAGTTGGGGAAGGGATTTTCATGA

mRNA sequence

ATGGCCGATATTCAACCCCCCGACCCCCAGATTAACGGCGCCCCTGCCCCTCCCGTCGTCTCCTCCGAAACCGTTGGATCCAAACGCCAGCGAAGACCCAGCGTCCGATTGGGGGATATCGGCGGCGACCAACCCTACGATTCCTATGCCCGCCGCACCAATAAGCCCTGGAAGTTTGCCTCGGATAATCGCAAGGACTCCTCCGCTGCCTCTGCCAAGAACTCCAAAACTCGGCCCTTGACCAACTTGAGGTCGGCGGGGGGTGGGGGGGCCGAATTTCGCGAGACCCCAGAGGGCGAAGACAAAGAGAACAATTTGGATAGCGTTGCAATTGGGAGCTGGAGATTGAAGGATTCCAAGCGGAGAGGCTCAGCCGCCACCAAGAGGGTTAGAACTAATTGGGTATCCCCCAAGCACGACGAAGGCGGCGGAGGGGGGGAGGCAGATGAAAAGTATAGCGCCGGAGAAGACGTGGAGGAGGGGTATCGGGATTACGACGTTGATAACTCGGAAAGTCCCCTGAAAGAACAAAGCTCAATGCATTCGCTTGAGAATTTGGCGATGGAAGGTGAGGGGAAGGAAAGGGAGATGCTTTATCAGGGGAATAGAAGATGTATCCGGTCTAGGGTTTCGGAGGGTAGAGAGCACCAAGATGGGCTCGAGTTTTCAGGGCCTTCGGACACGGATGCCAGGAATTGGAAATGCGGGACTAGCGGTGATAGGAATGGGAATGGTGGGAGAGGAGTAGATGGGGTTAGAGTTTGGCTCAACGGCTTAGGGTTAGGTCGGTATGCTCCAGTTTTTGAAATTCACGAGGTGGACGATGAGGTGTTGCCAATGTTGACACTCGAGGATCTCAAGGATATGGGAATAACTGCAGTTGGGTCCCGGAGAAAAATGTACTCCGCAGTCCAGAAGTTGGGGAAGGGATTTTCATGA

Coding sequence (CDS)

ATGGCCGATATTCAACCCCCCGACCCCCAGATTAACGGCGCCCCTGCCCCTCCCGTCGTCTCCTCCGAAACCGTTGGATCCAAACGCCAGCGAAGACCCAGCGTCCGATTGGGGGATATCGGCGGCGACCAACCCTACGATTCCTATGCCCGCCGCACCAATAAGCCCTGGAAGTTTGCCTCGGATAATCGCAAGGACTCCTCCGCTGCCTCTGCCAAGAACTCCAAAACTCGGCCCTTGACCAACTTGAGGTCGGCGGGGGGTGGGGGGGCCGAATTTCGCGAGACCCCAGAGGGCGAAGACAAAGAGAACAATTTGGATAGCGTTGCAATTGGGAGCTGGAGATTGAAGGATTCCAAGCGGAGAGGCTCAGCCGCCACCAAGAGGGTTAGAACTAATTGGGTATCCCCCAAGCACGACGAAGGCGGCGGAGGGGGGGAGGCAGATGAAAAGTATAGCGCCGGAGAAGACGTGGAGGAGGGGTATCGGGATTACGACGTTGATAACTCGGAAAGTCCCCTGAAAGAACAAAGCTCAATGCATTCGCTTGAGAATTTGGCGATGGAAGGTGAGGGGAAGGAAAGGGAGATGCTTTATCAGGGGAATAGAAGATGTATCCGGTCTAGGGTTTCGGAGGGTAGAGAGCACCAAGATGGGCTCGAGTTTTCAGGGCCTTCGGACACGGATGCCAGGAATTGGAAATGCGGGACTAGCGGTGATAGGAATGGGAATGGTGGGAGAGGAGTAGATGGGGTTAGAGTTTGGCTCAACGGCTTAGGGTTAGGTCGGTATGCTCCAGTTTTTGAAATTCACGAGGTGGACGATGAGGTGTTGCCAATGTTGACACTCGAGGATCTCAAGGATATGGGAATAACTGCAGTTGGGTCCCGGAGAAAAATGTACTCCGCAGTCCAGAAGTTGGGGAAGGGATTTTCATGA

Homology

[Close]

BLAST of CmoCh10G000270 vs. TrEMBL
Match: E5GBM6_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 2.1e-149
Identity = 274/315 (86.98%), Postives = 289/315 (91.75%), Query Frame = 1


Query: 1   MADIQPPDPQINGAPAPPVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTNKPWKFA 60
           MADIQPPDPQINGAP P VVSSETVGSKRQRRPSVRLGDIGGDQPYDSY RRTNKPWKF+
Sbjct: 1   MADIQPPDPQINGAPPPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYPRRTNKPWKFS 60

Query: 61  SDNRKDSSAASAKNSKTRPLTNLRSAGGGGAEFRETPEGEDKENNLDSVAIGSWRLKDSK 120
            DNRKDSSAA+AKNSKTRPLTN  SA           + EDKENNLD+VAIGSWRLKDSK
Sbjct: 61  LDNRKDSSAATAKNSKTRPLTNFSSA-----------DAEDKENNLDTVAIGSWRLKDSK 120

Query: 121 RRGSAATKRVRTNWVSPKHDEGGGGGEADEKYSAGEDVEEGYRDYDVDNSESPLKEQSSM 180
           RRGSAATKR RTNWVS KHDEGGGGGEADEKYSAGEDV+EGYRDYD++NSESPLKEQSSM
Sbjct: 121 RRGSAATKRARTNWVSSKHDEGGGGGEADEKYSAGEDVDEGYRDYDIENSESPLKEQSSM 180

Query: 181 HSLENLAMEGEGKEREMLYQGNRRCIRSRVSEGREHQDGLEFSGPSDTDARNWKCGTSGD 240
           HSLENLAMEG+G +REMLYQGNRR IRSRVSEGR+HQ+GLEFSGPSDTDARNWKCGTSGD
Sbjct: 181 HSLENLAMEGQGNDREMLYQGNRRSIRSRVSEGRDHQEGLEFSGPSDTDARNWKCGTSGD 240

Query: 241 RNGNGGRGV---DGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSR 300
           RNGNGGRG+   DGVRVWLNGLGLGRYAP+FEIHEVDDEVLPMLTLEDLKDMGI+AVGSR
Sbjct: 241 RNGNGGRGLCGEDGVRVWLNGLGLGRYAPIFEIHEVDDEVLPMLTLEDLKDMGISAVGSR 300

Query: 301 RKMYSAVQKLGKGFS 313
           RKMY A+QKLGKGFS
Sbjct: 301 RKMYCAIQKLGKGFS 304

[Close]

BLAST of CmoCh10G000270 vs. TrEMBL
Match: A0A0A0LRM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000710 PE=4 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 3.9e-148
Identity = 271/315 (86.03%), Postives = 288/315 (91.43%), Query Frame = 1


Query: 1   MADIQPPDPQINGAPAPPVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTNKPWKFA 60
           MADIQPPDPQINGAP P VVSSETVGSKRQRRPSVRLGDIGGDQPYDSY RRTNKPWKF+
Sbjct: 1   MADIQPPDPQINGAPPPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYPRRTNKPWKFS 60

Query: 61  SDNRKDSSAASAKNSKTRPLTNLRSAGGGGAEFRETPEGEDKENNLDSVAIGSWRLKDSK 120
            +NRKDSSAA+AKNSKTRPLTN  SA           + EDKENNLD+VAIGSWRLKDSK
Sbjct: 61  LENRKDSSAATAKNSKTRPLTNFSSA-----------DAEDKENNLDTVAIGSWRLKDSK 120

Query: 121 RRGSAATKRVRTNWVSPKHDEGGGGGEADEKYSAGEDVEEGYRDYDVDNSESPLKEQSSM 180
           RRGSAATKR RTNW S KHDEGGGGGEAD+KYSAGEDV+EGYRDYD++NSESPLKEQSSM
Sbjct: 121 RRGSAATKRARTNWASSKHDEGGGGGEADDKYSAGEDVDEGYRDYDIENSESPLKEQSSM 180

Query: 181 HSLENLAMEGEGKEREMLYQGNRRCIRSRVSEGREHQDGLEFSGPSDTDARNWKCGTSGD 240
           HSLENLAMEG+G +REMLYQGNRR IRSRVSEGR+HQ+GLEFSGPSDTDARNWKCGTSGD
Sbjct: 181 HSLENLAMEGQGNDREMLYQGNRRSIRSRVSEGRDHQEGLEFSGPSDTDARNWKCGTSGD 240

Query: 241 RNGNGGRGV---DGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSR 300
           RNGNGGRG+   DGVRVWLNGLGLGRYAP+FEIHEVDDEVLPMLTLEDLKDMGI+AVGSR
Sbjct: 241 RNGNGGRGLCGEDGVRVWLNGLGLGRYAPIFEIHEVDDEVLPMLTLEDLKDMGISAVGSR 300

Query: 301 RKMYSAVQKLGKGFS 313
           RKMY A+QKLGKGFS
Sbjct: 301 RKMYCAIQKLGKGFS 304

[Close]

BLAST of CmoCh10G000270 vs. TrEMBL
Match: W9RHC5_9ROSA (Protein bicaudal C-1-like protein OS=Morus notabilis GN=L484_008845 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 4.1e-105
Identity = 218/341 (63.93%), Postives = 257/341 (75.37%), Query Frame = 1


Query: 1   MADIQPPDPQINGAP---------------APPVVSSETVGSKRQRRPSVRLGDIGGDQP 60
           MA+IQPP+ QING                 A  +  SETVGSKRQRRPSVRLGDIGGDQP
Sbjct: 1   MAEIQPPEAQINGGGGVGGAVSGGVGGGGGAMLMGPSETVGSKRQRRPSVRLGDIGGDQP 60

Query: 61  YDSYARRTNKPWKFASDNRKDSSAAS---AKNSKTRPLTNLRSAGGGGAEFRETPEGEDK 120
           YDS+ RRT+K WK   ++   S   +   AK SKTRPL N  S+GG   +  +  E E +
Sbjct: 61  YDSHVRRTSKQWKLPIEHHHHSQRTNRDFAKTSKTRPLINF-SSGGDALDALDLDEREIR 120

Query: 121 ENNLDSVAIGSWRLKDSKRRGSAATKRVRTNWVSPKHDEGGGGG------EADEKYSAGE 180
           + NL+++AIGSW+LKDSK+RGS +TKR+R+NW+SPK D+GGGGG      E DEKYSAGE
Sbjct: 121 DANLETMAIGSWKLKDSKKRGSISTKRIRSNWISPKLDDGGGGGADTGGAEGDEKYSAGE 180

Query: 181 DVEEGYRDYDVDNSESPLKEQSSMHSLENLAMEGEG--KEREMLYQGNRRCIRSRVSEGR 240
           DV++G RD+DV+NSESPLKEQS +HSLENLA++G G   ERE+LY GNRR IR+RVS+  
Sbjct: 181 DVDDGNRDFDVENSESPLKEQSPIHSLENLAVDGHGIGNEREVLYHGNRRQIRARVSD-- 240

Query: 241 EHQDGLEFSGPSDTDARNWKCGTSGDRNGNGGRG---VDGVRVWLNGLGLGRYAPVFEIH 300
            + DG+E SGPSD +AR WKC   GDRNGNGGR     DGVRVWLNGLGLGRYAPVFE+H
Sbjct: 241 -NHDGMELSGPSDNEAREWKC---GDRNGNGGRARCEEDGVRVWLNGLGLGRYAPVFEVH 300

Query: 301 EVDDEVLPMLTLEDLKDMGITAVGSRRKMYSAVQKLGKGFS 313
           EVDDEVLPMLTLEDLKDMGI AVGSRRKM+ A+QKLGKGFS
Sbjct: 301 EVDDEVLPMLTLEDLKDMGINAVGSRRKMFCAIQKLGKGFS 334

[Close]

BLAST of CmoCh10G000270 vs. TrEMBL
Match: M5WEK2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa023714mg PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 3.0e-92
Identity = 190/282 (67.38%), Postives = 225/282 (79.79%), Query Frame = 1


Query: 1   MADIQPPDPQINGAPAPPVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTNKPWKFA 60
           MA+I PP  QING     + SSETVGSKRQRRPSVRLGDIGGDQPYDS+ RRT K WK  
Sbjct: 1   MAEIPPPMGQINGGQLM-LGSSETVGSKRQRRPSVRLGDIGGDQPYDSHVRRTTKQWKLP 60

Query: 61  SDNRKDSSAASAKNSKTRPLTNLRSAGGGGAEFRETPEGEDKENNLDSVAIGSWRLKDSK 120
            D+RKDS+    K+SKTRPLTNL +    GA+F+ET +GED+E NLDSVAIGSW++KD+K
Sbjct: 61  LDHRKDSN----KSSKTRPLTNLSA----GADFQETLDGEDREGNLDSVAIGSWKVKDTK 120

Query: 121 RRGSAATKRVRTNWVSPKHDEGG--GGGEADEKYSAGEDVEEGYRDYDVDNSESPLKEQS 180
           +R S  TKRVR+NWVS K DEGG     E D+K+S GEDVE+GYR +DV+NSESPLK+QS
Sbjct: 121 KRASN-TKRVRSNWVSSKIDEGGDAAAAEGDDKFSGGEDVEDGYRVFDVENSESPLKDQS 180

Query: 181 SMHSLENLAMEGEGKEREMLYQGNRRCIRSRVSEGREHQDGLEFSGPSDTDARNWKC-GT 240
            +HS +NL ++G   ER++LY G+RR +R+RVSEGR+H DG+E SGPSD DAR+W C GT
Sbjct: 181 PIHSSDNLGVDGHLNERDVLYHGSRRPMRTRVSEGRDHHDGVELSGPSDNDARDWNCRGT 240

Query: 241 SGDRNGNGGRGV---DGVRVWLNGLGLGRYAPVFEIHEVDDE 277
           SGDRNGN GRG    DGVRVWLNGLGLGRYAP+FEIHEVDDE
Sbjct: 241 SGDRNGNEGRGTCGEDGVRVWLNGLGLGRYAPMFEIHEVDDE 272

[Close]

BLAST of CmoCh10G000270 vs. TrEMBL
Match: A0A067JFD7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26388 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 3.3e-91
Identity = 210/338 (62.13%), Postives = 248/338 (73.37%), Query Frame = 1


Query: 1   MADIQPPDPQINGAP-----------AP-PVVSSETVGSKRQRRPSVRLGDIGGDQPYDS 60
           MADIQPP+  +NG             AP  V SSETVGSKRQRRPSVRLG+IGGDQ YD+
Sbjct: 1   MADIQPPEGHLNGGSVGGVSVDRGVGAPIAVTSSETVGSKRQRRPSVRLGEIGGDQLYDT 60

Query: 61  YARRT--NKPWK----FASDNRKDSSAASAKNSKTRPLTNLRSAGGGGAEFRETPEGEDK 120
           + RRT  NK WK     + D++KD ++++ K SKTR LTNL ++G    EF ET + EDK
Sbjct: 61  HPRRTSNNKQWKHHQLLSLDHKKDPNSSN-KGSKTRALTNLTTSG----EFAETLD-EDK 120

Query: 121 ENNLDSVAIGSWRLKDSKRRGS-AATKRVRTNWVSPKHDEGGGGG-----EADEKYSAGE 180
           E NLDS+AIGSWR+KDSK+R S A TKRVR+NWVS K D+GGGGG     E DEKYS GE
Sbjct: 121 EVNLDSIAIGSWRVKDSKKRASNATTKRVRSNWVS-KIDDGGGGGSHNNVEGDEKYSGGE 180

Query: 181 DVEEGYRDYDVDNSESPLKEQSSMHSLENLAMEGEGKEREMLYQGNRRCIRSRVSEGREH 240
           DV++ YR++D++NS+SPLKEQS +HSLENL    E  EREM Y  NRR IR+R +     
Sbjct: 181 DVDDTYREFDMENSDSPLKEQSPVHSLENLGDGNERNEREMYY--NRRTIRARDNHNHNR 240

Query: 241 -QDGLEFSGPSDTDARNWKCGTSGDRNGN-GGRGVDGVRVWLNGLGLGRYAPVFEIHEVD 300
             DG+E SGPSDTDAR+++       NG  GG G DGVR+WLN +GLGRYAP FEIHEVD
Sbjct: 241 LHDGVELSGPSDTDARDYR------NNGRCGGGGEDGVRIWLNSIGLGRYAPFFEIHEVD 300

Query: 301 DEVLPMLTLEDLKDMGITAVGSRRKMYSAVQKLGKGFS 313
           DEVLPMLTLEDLKDMGI AVGSRRKM+ A+QKLGKGFS
Sbjct: 301 DEVLPMLTLEDLKDMGIKAVGSRRKMFCAIQKLGKGFS 323

[Close]

BLAST of CmoCh10G000270 vs. TAIR10
Match: AT3G48800.1 (AT3G48800.1 Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 205.3 bits (521), Expect = 5.5e-53
Identity = 151/333 (45.35%), Postives = 190/333 (57.06%), Query Frame = 1


Query: 1   MADIQPPD-PQINGAPA--PPVVSSETV-----GSKRQRRPSVRLGDIGGDQ-------- 60
           MA++QP D  Q NG     P   S+E       GSKR RRPSVRLG+IGGDQ        
Sbjct: 1   MAELQPVDGQQTNGGVVTIPASTSAEATAIAAAGSKRLRRPSVRLGEIGGDQYQQQHHHH 60

Query: 61  ----PYDSYARRTNKPWKFASDNRKDSSAASAKNSKTRPLTNLRSAGGGGAEFRETPEGE 120
                YDS  R++       S NRKD+S    K+S+TR LTNL S    G E   T + E
Sbjct: 61  AAAAAYDSQGRKSKWTPTTTSGNRKDTS----KSSRTRTLTNLSS----GYENIGTLDDE 120

Query: 121 DKENNLDSVAIGSWRLKDSKRRGS-AATKRVRTNWVSPKHDEGGGGGEADEKYSAGEDVE 180
            +E N+DS  +GSWR+K  KR GS AA KRVR+NWVS         G+ DEK S GE++E
Sbjct: 121 -REGNVDSFGVGSWRVK--KRVGSSAAAKRVRSNWVSKV-------GDGDEKISGGEELE 180

Query: 181 EGYRDYDVDNSESPLKEQSSMHSLENLAMEGEGKEREMLYQGNRRCIRSRVSEGREHQDG 240
            G+RD+  ++SESP+KE       E+L  +G G      + G RR   +  S  RE +  
Sbjct: 181 GGFRDFSREDSESPIKE-------ESLDRDGGG------FYGRRRYESNNSSGNREFESN 240

Query: 241 LEFSGPSDTDARNWKCGTSGDRNGNGGRGVDGVRVWLNGLGLGRYAPVFEIHEVDDEVLP 300
           ++                        G G +GV++WL  LGLGRY P+FEIHEVD+EVLP
Sbjct: 241 MD------------------------GGGKEGVKIWLQELGLGRYWPMFEIHEVDEEVLP 278

Query: 301 MLTLEDLKDMGITAVGSRRKMYSAVQKLGKGFS 313
           +LTLEDLKDMGI AVGSRRKM+ A+QKLG+ FS
Sbjct: 301 LLTLEDLKDMGINAVGSRRKMFCAIQKLGREFS 278

[Close]

BLAST of CmoCh10G000270 vs. TAIR10
Match: AT5G23680.1 (AT5G23680.1 Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-35
Identity = 129/353 (36.54%), Postives = 178/353 (50.42%), Query Frame = 1


Query: 1   MADIQPPDP-QINGAPAPPVVSSE------------TVGSKRQRRPSVRLGDIGGDQ--- 60
           MA++Q  +  QING   PP + +             +VGSKR RRPSVRLGDIGGDQ   
Sbjct: 1   MAELQLVEGHQINGGFIPPAIINSIEAPETSAAAGVSVGSKRLRRPSVRLGDIGGDQYHQ 60

Query: 61  ----PYDSYARRTNKPWKFASD------NRKDSSAASAK---NSKTRPLTNLRSAGGGGA 120
                YDS   R  K W+ +        NRK+ +  S K   +S+TR +TNL S G    
Sbjct: 61  HVVAAYDSPQVRRPK-WRPSGGGGGGGGNRKEPNNQSGKTTSSSRTRTMTNLSSGG---- 120

Query: 121 EFRETPEGEDKENNLDSVAIGSWRLKD-----------SKRRGSAATKRVRTNWVSPKHD 180
            +  T   ++     D V+IGSWR+K            +    +A+ KRVR+NW +    
Sbjct: 121 -YENTGTLDE-----DPVSIGSWRVKKWVKSSGGETAATTTTNTASAKRVRSNWAT---- 180

Query: 181 EGGGGGEADEKYSAGEDVEEGYRDYDVDNSESPLKEQSSMHSLENLAMEGEGKEREMLYQ 240
                          + VE+G   +  +  E    E+          + GE   R+    
Sbjct: 181 -------------RNDGVEQGDEKFSGEEEEEEEDEE----------LGGEEGFRDF--- 240

Query: 241 GNRRCIRSRVSEGREHQDG-LEFSGPSDTDARNWKCGTSGDRNGNGGRGVDGVRVWLNGL 300
            +R    S + E R +++  +E  G       +W+         +GGRG +GV++WL  L
Sbjct: 241 -SREDSESPMKERRRYENREVELLG-------DWQ---------SGGRGKEGVKIWLQEL 295

Query: 301 GLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSRRKMYSAVQKLGKGFS 313
           GLGRY P+FE+HEVD++VLP+LTLEDLKDMGI AVGSRRKMY A+QKLG+ FS
Sbjct: 301 GLGRYWPMFEMHEVDEQVLPLLTLEDLKDMGINAVGSRRKMYCAIQKLGREFS 295

[Close]

BLAST of CmoCh10G000270 vs. TAIR10
Match: AT2G45700.1 (AT2G45700.1 sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 49.7 bits (117), Expect = 3.9e-06
Identity = 24/58 (41.38%), Postives = 36/58 (62.07%), Query Frame = 1


Query: 255 WLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSRRKMYSAVQKLGKGFS 313
           WL  LGL +Y  VF   E+D + L  LT EDL  +GIT++G R+K+ +A+  +   F+
Sbjct: 247 WLRSLGLAKYEDVFIREEIDWDTLQSLTEEDLLSIGITSLGPRKKIVNALSGVRDPFA 304

[Close]

BLAST of CmoCh10G000270 vs. NCBI nr
Match: gi|659128810|ref|XP_008464381.1| (PREDICTED: uncharacterized protein LOC103502284 [Cucumis melo])

HSP 1 Score: 536.6 bits (1381), Expect = 2.9e-149
Identity = 274/315 (86.98%), Postives = 289/315 (91.75%), Query Frame = 1


Query: 1   MADIQPPDPQINGAPAPPVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTNKPWKFA 60
           MADIQPPDPQINGAP P VVSSETVGSKRQRRPSVRLGDIGGDQPYDSY RRTNKPWKF+
Sbjct: 1   MADIQPPDPQINGAPPPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYPRRTNKPWKFS 60

Query: 61  SDNRKDSSAASAKNSKTRPLTNLRSAGGGGAEFRETPEGEDKENNLDSVAIGSWRLKDSK 120
            DNRKDSSAA+AKNSKTRPLTN  SA           + EDKENNLD+VAIGSWRLKDSK
Sbjct: 61  LDNRKDSSAATAKNSKTRPLTNFSSA-----------DAEDKENNLDTVAIGSWRLKDSK 120

Query: 121 RRGSAATKRVRTNWVSPKHDEGGGGGEADEKYSAGEDVEEGYRDYDVDNSESPLKEQSSM 180
           RRGSAATKR RTNWVS KHDEGGGGGEADEKYSAGEDV+EGYRDYD++NSESPLKEQSSM
Sbjct: 121 RRGSAATKRARTNWVSSKHDEGGGGGEADEKYSAGEDVDEGYRDYDIENSESPLKEQSSM 180

Query: 181 HSLENLAMEGEGKEREMLYQGNRRCIRSRVSEGREHQDGLEFSGPSDTDARNWKCGTSGD 240
           HSLENLAMEG+G +REMLYQGNRR IRSRVSEGR+HQ+GLEFSGPSDTDARNWKCGTSGD
Sbjct: 181 HSLENLAMEGQGNDREMLYQGNRRSIRSRVSEGRDHQEGLEFSGPSDTDARNWKCGTSGD 240

Query: 241 RNGNGGRGV---DGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSR 300
           RNGNGGRG+   DGVRVWLNGLGLGRYAP+FEIHEVDDEVLPMLTLEDLKDMGI+AVGSR
Sbjct: 241 RNGNGGRGLCGEDGVRVWLNGLGLGRYAPIFEIHEVDDEVLPMLTLEDLKDMGISAVGSR 300

Query: 301 RKMYSAVQKLGKGFS 313
           RKMY A+QKLGKGFS
Sbjct: 301 RKMYCAIQKLGKGFS 304

[Close]

BLAST of CmoCh10G000270 vs. NCBI nr
Match: gi|778655234|ref|XP_011649522.1| (PREDICTED: uncharacterized protein LOC101208783 [Cucumis sativus])

HSP 1 Score: 532.3 bits (1370), Expect = 5.6e-148
Identity = 271/315 (86.03%), Postives = 288/315 (91.43%), Query Frame = 1


Query: 1   MADIQPPDPQINGAPAPPVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTNKPWKFA 60
           MADIQPPDPQINGAP P VVSSETVGSKRQRRPSVRLGDIGGDQPYDSY RRTNKPWKF+
Sbjct: 1   MADIQPPDPQINGAPPPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYPRRTNKPWKFS 60

Query: 61  SDNRKDSSAASAKNSKTRPLTNLRSAGGGGAEFRETPEGEDKENNLDSVAIGSWRLKDSK 120
            +NRKDSSAA+AKNSKTRPLTN  SA           + EDKENNLD+VAIGSWRLKDSK
Sbjct: 61  LENRKDSSAATAKNSKTRPLTNFSSA-----------DAEDKENNLDTVAIGSWRLKDSK 120

Query: 121 RRGSAATKRVRTNWVSPKHDEGGGGGEADEKYSAGEDVEEGYRDYDVDNSESPLKEQSSM 180
           RRGSAATKR RTNW S KHDEGGGGGEAD+KYSAGEDV+EGYRDYD++NSESPLKEQSSM
Sbjct: 121 RRGSAATKRARTNWASSKHDEGGGGGEADDKYSAGEDVDEGYRDYDIENSESPLKEQSSM 180

Query: 181 HSLENLAMEGEGKEREMLYQGNRRCIRSRVSEGREHQDGLEFSGPSDTDARNWKCGTSGD 240
           HSLENLAMEG+G +REMLYQGNRR IRSRVSEGR+HQ+GLEFSGPSDTDARNWKCGTSGD
Sbjct: 181 HSLENLAMEGQGNDREMLYQGNRRSIRSRVSEGRDHQEGLEFSGPSDTDARNWKCGTSGD 240

Query: 241 RNGNGGRGV---DGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSR 300
           RNGNGGRG+   DGVRVWLNGLGLGRYAP+FEIHEVDDEVLPMLTLEDLKDMGI+AVGSR
Sbjct: 241 RNGNGGRGLCGEDGVRVWLNGLGLGRYAPIFEIHEVDDEVLPMLTLEDLKDMGISAVGSR 300

Query: 301 RKMYSAVQKLGKGFS 313
           RKMY A+QKLGKGFS
Sbjct: 301 RKMYCAIQKLGKGFS 304

[Close]

BLAST of CmoCh10G000270 vs. NCBI nr
Match: gi|645268464|ref|XP_008239539.1| (PREDICTED: uncharacterized protein LOC103338131 [Prunus mume])

HSP 1 Score: 414.1 bits (1063), Expect = 2.2e-112
Identity = 224/318 (70.44%), Postives = 260/318 (81.76%), Query Frame = 1


Query: 1   MADIQPPDPQINGAPAPPVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTNKPWKFA 60
           MA+I PP  QING     + SSETVGSKRQRRPSVRLGDIGGDQPYDS+ RRT K WK  
Sbjct: 1   MAEIPPPMGQINGGQLM-LGSSETVGSKRQRRPSVRLGDIGGDQPYDSHVRRTTKQWKLP 60

Query: 61  SDNRKDSSAASAKNSKTRPLTNLRSAGGGGAEFRETPEGEDKENNLDSVAIGSWRLKDSK 120
            D+RKDS+    K+SKTRPLTNL +    GA+F+ET +GED+E NLDSVAIGSW++KD+K
Sbjct: 61  LDHRKDSN----KSSKTRPLTNLSA----GADFQETLDGEDREGNLDSVAIGSWKVKDTK 120

Query: 121 RRGSAATKRVRTNWVSPKHDEGG--GGGEADEKYSAGEDVEEGYRDYDVDNSESPLKEQS 180
           +R S  TKRVR+NWVS K DEGG     E D+K+S GEDVE+GYRD+DV+NSESPLK+QS
Sbjct: 121 KRASN-TKRVRSNWVSSKIDEGGDAAAAEGDDKFSGGEDVEDGYRDFDVENSESPLKDQS 180

Query: 181 SMHSLENLAMEGEGKEREMLYQGNRRCIRSRVSEGREHQDGLEFSGPSDTDARNWKC-GT 240
            +HS +NL ++G   ER++LY G+RR IR+RVSEGR+H DG+E SGPSD DAR+W C GT
Sbjct: 181 PLHSSDNLGVDGHLNERDVLYHGSRRPIRTRVSEGRDHHDGVELSGPSDNDARDWNCRGT 240

Query: 241 SGDRNGNGGR---GVDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAV 300
           SGDRNGN GR   G DGVRVWLNGLGLGRYAP+FEIHEVDDEVLPMLTLEDLKDMGI AV
Sbjct: 241 SGDRNGNEGRGRCGEDGVRVWLNGLGLGRYAPMFEIHEVDDEVLPMLTLEDLKDMGINAV 300

Query: 301 GSRRKMYSAVQKLGKGFS 313
           G+RRKMY A+QKLGKGFS
Sbjct: 301 GTRRKMYCAIQKLGKGFS 308

[Close]

BLAST of CmoCh10G000270 vs. NCBI nr
Match: gi|694385936|ref|XP_009368780.1| (PREDICTED: uncharacterized protein LOC103958261 [Pyrus x bretschneideri])

HSP 1 Score: 410.2 bits (1053), Expect = 3.2e-111
Identity = 227/319 (71.16%), Postives = 258/319 (80.88%), Query Frame = 1


Query: 1   MADIQP-PDPQINGAPAPPVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTNKPWKF 60
           MA+IQP P  QING     + SSETVGSKRQRRPSVRLGDIGGDQPYDS  RR  K WKF
Sbjct: 1   MAEIQPQPVSQINGGGQFLMGSSETVGSKRQRRPSVRLGDIGGDQPYDSQVRRATKQWKF 60

Query: 61  ASDNRKDSSAASAKNSKTRPLTNLRSAGGGGAEFRETPEGEDKENNLDSVAIGSWRLKDS 120
             D+RKD++    K+SK RPLTNL S G    EF ET +GED+E NLDSVAIGSW++KD+
Sbjct: 61  PPDHRKDAN----KSSKIRPLTNLSSVG----EFHETLDGEDREGNLDSVAIGSWKVKDA 120

Query: 121 KRRGSAATKRVRTNWVSPKHDEGGGGG-EADEKYSAGEDVEEGY-RDYDVDNSESPLKEQ 180
           K+R S  TKRVR+NWVS K DEGGGGG E DEK+S  EDV+EGY RD+DV+NSESPLKEQ
Sbjct: 121 KKRASNVTKRVRSNWVSSKIDEGGGGGGEGDEKFSGAEDVDEGYHRDFDVENSESPLKEQ 180

Query: 181 SSMHSLENLAMEGEGKEREMLYQGNRRCIRSRVSEGREHQDGLEFSGPSDTDARNWKC-G 240
           S + S ENL ++G    RE+LY G+RR IR+R+SEGR++ DG+E SGPSDTDAR+W C G
Sbjct: 181 SPILSSENLGVDGRANGRELLYHGSRRPIRTRISEGRDNHDGIEQSGPSDTDARDWNCRG 240

Query: 241 TSGDRNGNGGR---GVDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITA 300
           TSGDR+ N GR   G DGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGI+A
Sbjct: 241 TSGDRDENEGRERCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISA 300

Query: 301 VGSRRKMYSAVQKLGKGFS 313
           VGSRRKMY A+QKLGKGFS
Sbjct: 301 VGSRRKMYCAIQKLGKGFS 311

[Close]

BLAST of CmoCh10G000270 vs. NCBI nr
Match: gi|657962638|ref|XP_008372918.1| (PREDICTED: uncharacterized protein LOC103436275 [Malus domestica])

HSP 1 Score: 404.4 bits (1038), Expect = 1.7e-109
Identity = 221/318 (69.50%), Postives = 255/318 (80.19%), Query Frame = 1


Query: 1   MADIQP-PDPQINGAPAPPVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTNKPWKF 60
           MA+IQP P PQING     + SSETVGSKRQRRPSVRLGDIGGDQPYDS  RR  K W+ 
Sbjct: 1   MAEIQPQPVPQINGGGQFLMGSSETVGSKRQRRPSVRLGDIGGDQPYDSQVRRATKQWRL 60

Query: 61  ASDNRKDSSAASAKNSKTRPLTNLRSAGGGGAEFRETPEGEDKENNLDSVAIGSWRLKDS 120
             D+RKD++    K+SK RPLTNL S G    EF ET +GED+E NLDSVAIGSW++KD+
Sbjct: 61  PPDHRKDAN----KSSKPRPLTNLSSVG----EFHETLDGEDREANLDSVAIGSWKVKDA 120

Query: 121 KRRGSAATKRVRTNWVSPKHDEGGGGGEADEKYSAGEDVEEGY-RDYDVDNSESPLKEQS 180
           K+R S+ TKRVR+NWVS K DE  GGGE DEK+S  EDV++GY RD+DV+NSESPLKE+S
Sbjct: 121 KKRASSVTKRVRSNWVSSKIDE--GGGEGDEKFSGAEDVDDGYHRDFDVENSESPLKERS 180

Query: 181 SMHSLENLAMEGEGKEREMLYQGNRRCIRSRVSEGREHQDGLEFSGPSDTDARNWKC-GT 240
            +HS ENL ++G    RE+LY G+RR IR+R+SEGR++ DG+E SGPSD DAR+W C GT
Sbjct: 181 PIHSSENLGVDGHANGRELLYHGSRRPIRTRISEGRDNHDGIELSGPSDNDARDWNCRGT 240

Query: 241 SGDRNGNGGR---GVDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAV 300
           SG R GN GR   G DGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMG+ AV
Sbjct: 241 SGVRIGNEGRGRCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGVNAV 300

Query: 301 GSRRKMYSAVQKLGKGFS 313
           GSRRKMY A+QKLGKGFS
Sbjct: 301 GSRRKMYCAIQKLGKGFS 308

The following BLAST results are available for this feature:

BLAST of CmoCh10G000270 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh10G000270 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GBM6_CUCME	2.1e-149	86.98	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0LRM8_CUCSA	3.9e-148	86.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000710 PE=4 SV=1	[more]
W9RHC5_9ROSA	4.1e-105	63.93	Protein bicaudal C-1-like protein OS=Morus notabilis GN=L484_008845 PE=4 SV=1	[more]
M5WEK2_PRUPE	3.0e-92	67.38	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa023714mg PE=4 S...	[more]
A0A067JFD7_JATCU	3.3e-91	62.13	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26388 PE=4 SV=1	[more]

BLAST of CmoCh10G000270 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G48800.1	5.5e-53	45.35	Sterile alpha motif (SAM) domain-containing protein	[more]
AT5G23680.1	1.4e-35	36.54	Sterile alpha motif (SAM) domain-containing protein	[more]
AT2G45700.1	3.9e-06	41.38	sterile alpha motif (SAM) domain-containing protein	[more]

BLAST of CmoCh10G000270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659128810\|ref\|XP_008464381.1\|	2.9e-149	86.98	PREDICTED: uncharacterized protein LOC103502284 [Cucumis melo]	[more]
gi\|778655234\|ref\|XP_011649522.1\|	5.6e-148	86.03	PREDICTED: uncharacterized protein LOC101208783 [Cucumis sativus]	[more]
gi\|645268464\|ref\|XP_008239539.1\|	2.2e-112	70.44	PREDICTED: uncharacterized protein LOC103338131 [Prunus mume]	[more]
gi\|694385936\|ref\|XP_009368780.1\|	3.2e-111	71.16	PREDICTED: uncharacterized protein LOC103958261 [Pyrus x bretschneideri]	[more]
gi\|657962638\|ref\|XP_008372918.1\|	1.7e-109	69.50	PREDICTED: uncharacterized protein LOC103436275 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001660	SAM
IPR013761	SAM/pointed_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G000270.1	CmoCh10G000270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001660	Sterile alpha motif domain	PFAM	PF00536	SAM_1	coord: 249..307 score: 3.0
IPR001660	Sterile alpha motif domain	SMART	SM00454	SAM_4	coord: 244..310 score: 9.9
IPR001660	Sterile alpha motif domain	PROFILE	PS50105	SAM_DOMAIN	coord: 247..310 score: 15
IPR013761	Sterile alpha motif/pointed domain	GENE3D	G3DSA:1.10.150.50		coord: 249..307 score: 4.6
IPR013761	Sterile alpha motif/pointed domain	unknown	SSF47769	SAM/Pointed domain	coord: 248..307 score: 1.33
None	No IPR available	PANTHER	PTHR10627	SCP160	coord: 21..202 score: 3.3E-56coord: 219..312 score: 3.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh10G000270	Cucsa.157020	Cucumber (Gy14) v1	cgycmoB0432
CmoCh10G000270	CmaCh10G000300	Cucurbita maxima (Rimu)	cmacmoB067
CmoCh10G000270	CmaCh11G000090	Cucurbita maxima (Rimu)	cmacmoB100
CmoCh10G000270	Cla019310	Watermelon (97103) v1	cmowmB064
CmoCh10G000270	Csa1G000710	Cucumber (Chinese Long) v2	cmocuB037
CmoCh10G000270	MELO3C026174	Melon (DHL92) v3.5.1	cmomeB057
CmoCh10G000270	ClCG06G018240	Watermelon (Charleston Gray)	cmowcgB065
CmoCh10G000270	CSPI01G00210	Wild cucumber (PI 183967)	cmocpiB040
CmoCh10G000270	Cp4.1LG04g16330	Cucurbita pepo (Zucchini)	cmocpeB070
CmoCh10G000270	Cp4.1LG18g09370	Cucurbita pepo (Zucchini)	cmocpeB055
CmoCh10G000270	MELO3C026174.2	Melon (DHL92) v3.6.1	cmomedB060
CmoCh10G000270	Cla97C06G128000	Watermelon (97103) v2	cmowmbB071
CmoCh10G000270	Bhi02G000481	Wax gourd	cmowgoB0075
CmoCh10G000270	Carg10253	Silver-seed gourd	carcmoB0493
CmoCh10G000270	Carg24559	Silver-seed gourd	carcmoB0829

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh10G000270	CmoCh11G000080	Cucurbita moschata (Rifu)	cmocmoB039

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh10G000270	Wax gourd	cmowgoB0060
CmoCh10G000270	Cucurbita moschata (Rifu)	cmocmoB042
CmoCh10G000270	Cucurbita moschata (Rifu)	cmocmoB054
CmoCh10G000270	Cucurbita moschata (Rifu)	cmocmoB065
CmoCh10G000270	Cucurbita maxima (Rimu)	cmacmoB111
CmoCh10G000270	Cucurbita maxima (Rimu)	cmacmoB212
CmoCh10G000270	Cucurbita maxima (Rimu)	cmacmoB387
CmoCh10G000270	Wild cucumber (PI 183967)	cmocpiB056
CmoCh10G000270	Cucumber (Chinese Long) v2	cmocuB061
CmoCh10G000270	Melon (DHL92) v3.5.1	cmomeB041
CmoCh10G000270	Watermelon (Charleston Gray)	cmowcgB053
CmoCh10G000270	Watermelon (97103) v1	cmowmB045
CmoCh10G000270	Cucurbita pepo (Zucchini)	cmocpeB057
CmoCh10G000270	Bottle gourd (USVL1VR-Ls)	cmolsiB044
CmoCh10G000270	Bottle gourd (USVL1VR-Ls)	cmolsiB058
CmoCh10G000270	Cucumber (Gy14) v2	cgybcmoB005
CmoCh10G000270	Cucumber (Gy14) v2	cgybcmoB026
CmoCh10G000270	Cucumber (Gy14) v2	cgybcmoB262
CmoCh10G000270	Melon (DHL92) v3.6.1	cmomedB045
CmoCh10G000270	Silver-seed gourd	carcmoB0668
CmoCh10G000270	Cucumber (Chinese Long) v3	cmocucB0044
CmoCh10G000270	Cucumber (Chinese Long) v3	cmocucB0066
CmoCh10G000270	Cucumber (Chinese Long) v3	cmocucB0074
CmoCh10G000270	Watermelon (97103) v2	cmowmbB055