Cp4.1LG04g11170 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g11170
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionEthylene-responsive transcription factor ERF017 family
LocationCp4.1LG04 : 9005128 .. 9005733 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAGCCCTCCTCCCCTCACAAATCCGCCGCCCACAACACAGATTCCCGCTACAAAGGCGTCCGCCGCCGGAAATGGGGCAAATTCGTCTCTGAAATTCGTCTCCCCAATAGCCGCGAACGGATCTGGTTAGGCTCCTATGATTCCGCCGAAAAGGCGGCGCGTGCTTTCGATGCCGCCCTTTTTTGTCTACGTGGCAGCTCCGCTCGCTTCAATTTCCCTAATAACCCACCGGATATTCCCGGTGCTACTCTGCTTTCCCGAGCAGAGATTCAAACCGTCGCCGCCCAATTCGCCAACTCCGACCCATCTCCCTCGACGGAATATTCCCAACCCATCGTCGATTCGCCGTCGCCGTCGATAGCTTCGGAATTAACAACCGCCGTAACAGAGTGTGAGGAAATATCGTCGTTTTTGGATTTTCACACCAACATGGGATTGGGACCGGATAATTACGGGTCGGAATTCGGGTCTTTTCTGCCCGAGTACAACCCGTTTTTTGATGAAATATTCAATTCTTCTACAGCTCCTTGTTTTGATTATGGAGATGAGAATTTTGACGCCATGACCACTCATCAGGATTTGTTTCTGTGGAATTTCTGA

mRNA sequence

ATGGCCAAGCCCTCCTCCCCTCACAAATCCGCCGCCCACAACACAGATTCCCGCTACAAAGGCGTCCGCCGCCGGAAATGGGGCAAATTCGTCTCTGAAATTCGTCTCCCCAATAGCCGCGAACGGATCTGGTTAGGCTCCTATGATTCCGCCGAAAAGGCGGCGCGTGCTTTCGATGCCGCCCTTTTTTGTCTACGTGGCAGCTCCGCTCGCTTCAATTTCCCTAATAACCCACCGGATATTCCCGGTGCTACTCTGCTTTCCCGAGCAGAGATTCAAACCGTCGCCGCCCAATTCGCCAACTCCGACCCATCTCCCTCGACGGAATATTCCCAACCCATCGTCGATTCGCCGTCGCCGTCGATAGCTTCGGAATTAACAACCGCCGTAACAGAGTGTGAGGAAATATCGTCGTTTTTGGATTTTCACACCAACATGGGATTGGGACCGGATAATTACGGGTCGGAATTCGGGTCTTTTCTGCCCGAGTACAACCCGTTTTTTGATGAAATATTCAATTCTTCTACAGCTCCTTGTTTTGATTATGGAGATGAGAATTTTGACGCCATGACCACTCATCAGGATTTGTTTCTGTGGAATTTCTGA

Coding sequence (CDS)

ATGGCCAAGCCCTCCTCCCCTCACAAATCCGCCGCCCACAACACAGATTCCCGCTACAAAGGCGTCCGCCGCCGGAAATGGGGCAAATTCGTCTCTGAAATTCGTCTCCCCAATAGCCGCGAACGGATCTGGTTAGGCTCCTATGATTCCGCCGAAAAGGCGGCGCGTGCTTTCGATGCCGCCCTTTTTTGTCTACGTGGCAGCTCCGCTCGCTTCAATTTCCCTAATAACCCACCGGATATTCCCGGTGCTACTCTGCTTTCCCGAGCAGAGATTCAAACCGTCGCCGCCCAATTCGCCAACTCCGACCCATCTCCCTCGACGGAATATTCCCAACCCATCGTCGATTCGCCGTCGCCGTCGATAGCTTCGGAATTAACAACCGCCGTAACAGAGTGTGAGGAAATATCGTCGTTTTTGGATTTTCACACCAACATGGGATTGGGACCGGATAATTACGGGTCGGAATTCGGGTCTTTTCTGCCCGAGTACAACCCGTTTTTTGATGAAATATTCAATTCTTCTACAGCTCCTTGTTTTGATTATGGAGATGAGAATTTTGACGCCATGACCACTCATCAGGATTTGTTTCTGTGGAATTTCTGA

Protein sequence

MAKPSSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSPSIASELTTAVTECEEISSFLDFHTNMGLGPDNYGSEFGSFLPEYNPFFDEIFNSSTAPCFDYGDENFDAMTTHQDLFLWNF
Homology
[Close]
BLAST of Cp4.1LG04g11170 vs. Swiss-Prot
Match: ERF17_ARATH (Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana GN=ERF017 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.5e-37
Identity = 96/200 (48.00%), Postives = 122/200 (61.00%), Query Frame = 1 

Query: 9   KSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGS 68
           + ++ +  S+YKGVR+RKWGK+VSEIRLPNSRERIWLGSYD+ EKAARAFDAAL+CLRG+
Sbjct: 2   EGSSSSMQSKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGN 61

Query: 69  SARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSPSIASELTT 128
           +A+FNFP+NPP I G   LSR+EI+  AA+FANS    S         S          +
Sbjct: 62  NAKFNFPDNPPVISGGRNLSRSEIREAAARFANSAEDDS---------SGGAGYEIRQES 121

Query: 129 AVTECEEISSFLDFHTNMGLGPDNYGSEFGSFLPEYNPFFDEI----FNSSTAPCFDY-- 188
           A T  +  S FL     +G G  N+ SEFG F P ++ F DE     F    +P  DY  
Sbjct: 122 ASTSMDVDSEFLSMLPTVGSG--NFASEFGLF-PGFDDFSDEYSGDRFREQLSPTQDYYQ 181

Query: 189 -GDENFDAMTTHQDLFLWNF 202
            G+E +        +FLWNF
Sbjct: 182 LGEETY----ADGSMFLWNF 185

[Close]
BLAST of Cp4.1LG04g11170 vs. Swiss-Prot
Match: ERF18_ARATH (Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana GN=ERF018 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.5e-33
Identity = 96/209 (45.93%), Postives = 121/209 (57.89%), Query Frame = 1 

Query: 1   MAKPSSPHKSAAHNT--DSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAF 60
           M K +   +    NT   S+YKGVR+RKWGK+VSEIRLP+SRERIWLGSYD+ EKAARAF
Sbjct: 1   MVKQAMKEEEKKRNTAMQSKYKGVRKRKWGKWVSEIRLPHSRERIWLGSYDTPEKAARAF 60

Query: 61  DAALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANS--DPSPSTEYSQPIVD 120
           DAA FCLRG  A FNFPNNPP I     L+  EIQ  AA+FAN+  D     E S  +  
Sbjct: 61  DAAQFCLRGGDANFNFPNNPPSISVEKSLTPPEIQEAAARFANTFQDIVKGEEESGLVPG 120

Query: 121 S----PSPSIASELTTAVTECEEISSFLDFHTNMGLGPDNYGSEFGSFLPEYNPFFDEIF 180
           S     SPS ++ + T+  + +   SFLD      L P N+G  F SF  +++ F     
Sbjct: 121 SEIRPESPSTSASVATSTVDYD--FSFLD------LLPMNFG--FDSFSDDFSGFSGGDR 180

Query: 181 NSSTAPCFDYGDENFDAMTTHQDLFLWNF 202
            +   P  DYG E+       + L LW+F
Sbjct: 181 FTEILPIEDYGGESL----LDESLILWDF 195

[Close]
BLAST of Cp4.1LG04g11170 vs. Swiss-Prot
Match: ERF16_ARATH (Ethylene-responsive transcription factor ERF016 OS=Arabidopsis thaliana GN=ERF016 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-29
Identity = 78/165 (47.27%), Postives = 99/165 (60.00%), Query Frame = 1 

Query: 18  RYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGSSARFNFPNN 77
           +Y GVR+RKWGK+V+EIRLPNSR+RIWLGS+DSAEKAARAFDAAL+CLRG  ARFNFP+N
Sbjct: 6   KYTGVRKRKWGKWVAEIRLPNSRDRIWLGSFDSAEKAARAFDAALYCLRGPGARFNFPDN 65

Query: 78  PPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSPSIASELTTAVTECEEIS 137
           PP+IPG   L+  +IQ VA++FA  +     E   P    P     +E    ++   EI+
Sbjct: 66  PPEIPGGRSLTPQQIQVVASRFACEEELLPPEQHHP--SPPRGDHNTEEEVIISARGEIN 125

Query: 138 SFLDFHTNMGLGPDNYGSEFGSFLPEYNPFFDEIFNSSTAPCFDY 183
           S     T   +G DN      +    Y P   E  N    P  D+
Sbjct: 126 SGSGGPTLGQVGEDNNNEGNSNDTSSYWPLIWEEENFVGPPNSDH 168

[Close]
BLAST of Cp4.1LG04g11170 vs. Swiss-Prot
Match: ERF15_ARATH (Ethylene-responsive transcription factor ERF015 OS=Arabidopsis thaliana GN=ERF015 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.6e-21
Identity = 60/123 (48.78%), Postives = 81/123 (65.85%), Query Frame = 1 

Query: 19  YKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGSSARFNFP-NN 78
           Y+GVR+R WGK+VSEIR+P +  RIWLGSYD+ EKAARA+DAALFC+RG    +NFP + 
Sbjct: 27  YRGVRKRSWGKWVSEIRVPKTGRRIWLGSYDAPEKAARAYDAALFCIRGEKGVYNFPTDK 86

Query: 79  PPDIPGATL--LSRAEIQTVAAQFANSDPS-PSTEYSQPIVDS-PSPSIASELTTAVTEC 137
            P +P  ++  LS+ +IQT+A  +A+S    PS   + P     PS   AS   +A TE 
Sbjct: 87  KPQLPEGSVRPLSKLDIQTIATNYASSVVHVPSHATTLPATTQVPSEVPASSDVSASTEI 146

[Close]
BLAST of Cp4.1LG04g11170 vs. Swiss-Prot
Match: ERF13_ARATH (Ethylene-responsive transcription factor ERF013 OS=Arabidopsis thaliana GN=ERF013 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.6e-21
Identity = 82/227 (36.12%), Postives = 113/227 (49.78%), Query Frame = 1 

Query: 5   SSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFC 64
           S+    +  N   +YKGVR R WG +V+EIR PN + RIWLGSY +AE AARA+DAAL C
Sbjct: 29  SALRHQSCKNKIKKYKGVRMRSWGSWVTEIRAPNQKTRIWLGSYSTAEAAARAYDAALLC 88

Query: 65  LRGSSARFNFPN----NP--PDIPGATLLSRAEIQTVAAQFANSD------PSPSTEYSQ 124
           L+G  A  NFPN    +P   +I   TLLS   IQ VAAQ ANS       PS   ++  
Sbjct: 89  LKGPKANLNFPNITTTSPFLMNIDEKTLLSPKSIQKVAAQAANSSSDHFTPPSDENDHDH 148

Query: 125 PIVDSPSPSIASELTTAVTECEE-----------ISSFLDFHTNMGL-GPDNYGSEFGSF 184
                  PS +S   ++  + +            + SF+D++ ++ L  P  Y  EFG  
Sbjct: 149 DDGLDHHPSASSSAASSPPDDDHHNDDDGDLVSLMESFVDYNEHVSLMDPSLY--EFG-- 208

Query: 185 LPEYNPFFDEIFNSSTAPCFDYGDENFDAMTTHQDLF------LWNF 202
                   +EIF ++  P FDY  +   +  T  D +      LW+F
Sbjct: 209 -------HNEIFFTNGDP-FDYSPQLHSSEATMDDFYDDVDIPLWSF 243

[Close]
BLAST of Cp4.1LG04g11170 vs. TrEMBL
Match: A0A0A0M292_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G597730 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.1e-71
Identity = 149/209 (71.29%), Postives = 171/209 (81.82%), Query Frame = 1 

Query: 1   MAKPSSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDA 60
           M KPSS   +A   +DSRYKGVRRRKWGK+VSEIRLPNSRERIWLGSYDSAEKAARAFDA
Sbjct: 1   MTKPSSA-AAALDTSDSRYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDA 60

Query: 61  ALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQP-IVDSPS 120
           ALFCLRG SARFNFP NPP+IP ATLLSR+EIQ+VAAQFANSDP PS+E+ +P   DSPS
Sbjct: 61  ALFCLRGRSARFNFPQNPPEIPDATLLSRSEIQSVAAQFANSDPIPSSEFHRPTTTDSPS 120

Query: 121 PSIASELTTAVTECEEISSFLDFHTNMGLGPDNYGSEFGSFLPEYNPFFDEIF-----NS 180
           PS+ SE+TT+V EC+E S FLD HT M  G DNYG++FG F PEYNPF++E+F     +S
Sbjct: 121 PSLVSEMTTSVIECDERSLFLDLHTAM--GSDNYGTDFGLF-PEYNPFYNELFINSSSSS 180

Query: 181 STAPCFDYGDENFDAMTTHQD--LFLWNF 202
           ST PC+DYGDE F+A  THQD   +LWNF
Sbjct: 181 STIPCYDYGDEIFEA--THQDDSSYLWNF 203

[Close]
BLAST of Cp4.1LG04g11170 vs. TrEMBL
Match: V4UP47_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009540mg PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 4.7e-46
Identity = 108/194 (55.67%), Postives = 131/194 (67.53%), Query Frame = 1 

Query: 12  AHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGSSAR 71
           A  +DSRYKGVR+RKWGK+VSEIRLPNSR RIWLGSYD+AEKAARAFDAALFCLRG SA+
Sbjct: 10  AEGSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 69

Query: 72  FNFPNNPPDIPGATLLSRAEIQTVAAQFANSDP----SPSTEYSQPIVDSPSPSIASELT 131
           FNFP+NPPDI G   L  +EIQ VAAQFANS+P    SP    S+   +  SPSI+    
Sbjct: 70  FNFPDNPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVSELQTEYLSPSISEATV 129

Query: 132 TAVTECEEISSFLDFHTNMGLGPDNYGSEFGSFLPEYNPFFDEIFNSSTAPCFDYGDENF 191
              ++     S LD  T      +NY SE+G F P ++   ++IF +   P  D+ DENF
Sbjct: 130 QLDSDGVFDGSLLDLLT--ASSSNNYPSEYGIF-PGFDDLSNDIF-TPQLPAVDFADENF 189

Query: 192 DAMTTHQDLFLWNF 202
           D +  +QD FLWNF
Sbjct: 190 DGLLLNQDSFLWNF 199

[Close]
BLAST of Cp4.1LG04g11170 vs. TrEMBL
Match: A0A067GEQ1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029068mg PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 4.7e-46
Identity = 108/194 (55.67%), Postives = 131/194 (67.53%), Query Frame = 1 

Query: 12  AHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGSSAR 71
           A  +DSRYKGVR+RKWGK+VSEIRLPNSR RIWLGSYD+AEKAARAFDAALFCLRG SA+
Sbjct: 10  AERSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 69

Query: 72  FNFPNNPPDIPGATLLSRAEIQTVAAQFANSDP----SPSTEYSQPIVDSPSPSIASELT 131
           FNFP+NPPDI G   L  +EIQ VAAQFANS+P    SP    S+   +  SPSI+    
Sbjct: 70  FNFPDNPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVSELQTEYLSPSISEATV 129

Query: 132 TAVTECEEISSFLDFHTNMGLGPDNYGSEFGSFLPEYNPFFDEIFNSSTAPCFDYGDENF 191
              ++     S LD  T      +NY SE+G F P ++   ++IF +   P  D+ DENF
Sbjct: 130 QLDSDGVFDGSLLDLLT--ASSSNNYPSEYGIF-PGFDDLSNDIF-TPQLPAVDFADENF 189

Query: 192 DAMTTHQDLFLWNF 202
           D +  +QD FLWNF
Sbjct: 190 DGLLLNQDSFLWNF 199

[Close]
BLAST of Cp4.1LG04g11170 vs. TrEMBL
Match: W6FFV7_9ROSA (Dehydration responsive element binding transcription factor OS=Morus notabilis GN=DREB5H PE=2 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 4.4e-44
Identity = 107/198 (54.04%), Postives = 133/198 (67.17%), Query Frame = 1 

Query: 18  RYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGSSARFNFPNN 77
           RYKGVR+RKWGK+VSEIRLPNSRERIWLGSYD+AEKAARAFDAALFCLRG +A+FNFP N
Sbjct: 22  RYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTAEKAARAFDAALFCLRGRTAKFNFPEN 81

Query: 78  PPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVD--------SPSPSIASELTTA 137
           PP+I G   LS AEIQ+ AA+FANS+  P     +P+ +        SPSPS++    T 
Sbjct: 82  PPEIAGGRSLSPAEIQSAAARFANSE-DPMKRSDRPVPELRMESETPSPSPSVSEGSVTV 141

Query: 138 VTECEEIS--SFLDFHTNMGLGPDNYGSEFGSFLPEYNPFFDEI---FNSSTAPCFDYGD 197
             + E  +  SF+D  TN+GLG  NY S++G F     P FD++   F     P  DYG+
Sbjct: 142 QLDSELTTDGSFMDMFTNIGLG--NYASDYGLF-----PGFDDLSGDFFMPPPPTIDYGE 201

Query: 198 ENFDAMTTH-QDLFLWNF 202
           EN++      Q+ FLWNF
Sbjct: 202 ENYNVDAVFPQESFLWNF 211

[Close]
BLAST of Cp4.1LG04g11170 vs. TrEMBL
Match: V7AZA1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G225000g PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 7.5e-44
Identity = 105/210 (50.00%), Postives = 135/210 (64.29%), Query Frame = 1 

Query: 1   MAKPSSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDA 60
           M KP    KSA   + + Y+GVR+RKWGK+VSEIRLPNSR+RIWLGSYDSAEKAARAFDA
Sbjct: 1   MVKPGGVEKSAEERSSTSYRGVRKRKWGKYVSEIRLPNSRQRIWLGSYDSAEKAARAFDA 60

Query: 61  ALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPI--VDSP 120
           A+FCLRGS A+FNFP++PP+I G   ++ ++IQ  AA+FANS+P       QP+  + S 
Sbjct: 61  AMFCLRGSGAKFNFPSDPPNIAGGRTMTPSQIQIAAARFANSEPQTDCSGQQPMESLASD 120

Query: 121 SPSIASELTTAVTECEEISSFLDFHTNMGLGPDNYGSEFG--SFLPEYNPF-----FDEI 180
             + +  L ++     ++S   D     G  PD + SEFG  SF+PE++ F     F   
Sbjct: 121 EETASLRLESSSPPLSDVSVQNDAIFQTGSFPDPF-SEFGSSSFVPEFSDFPSFDDFSRD 180

Query: 181 FNSSTAPCFDYGDENFDAMTTHQDLFLWNF 202
           F     P FDYG+EN D M   QD FLWNF
Sbjct: 181 FFMPELPSFDYGEENVDGMII-QDSFLWNF 208

[Close]
BLAST of Cp4.1LG04g11170 vs. TAIR10
Match: AT1G19210.1 (AT1G19210.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 157.5 bits (397), Expect = 8.4e-39
Identity = 96/200 (48.00%), Postives = 122/200 (61.00%), Query Frame = 1 

Query: 9   KSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGS 68
           + ++ +  S+YKGVR+RKWGK+VSEIRLPNSRERIWLGSYD+ EKAARAFDAAL+CLRG+
Sbjct: 2   EGSSSSMQSKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGN 61

Query: 69  SARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSPSIASELTT 128
           +A+FNFP+NPP I G   LSR+EI+  AA+FANS    S         S          +
Sbjct: 62  NAKFNFPDNPPVISGGRNLSRSEIREAAARFANSAEDDS---------SGGAGYEIRQES 121

Query: 129 AVTECEEISSFLDFHTNMGLGPDNYGSEFGSFLPEYNPFFDEI----FNSSTAPCFDY-- 188
           A T  +  S FL     +G G  N+ SEFG F P ++ F DE     F    +P  DY  
Sbjct: 122 ASTSMDVDSEFLSMLPTVGSG--NFASEFGLF-PGFDDFSDEYSGDRFREQLSPTQDYYQ 181

Query: 189 -GDENFDAMTTHQDLFLWNF 202
            G+E +        +FLWNF
Sbjct: 182 LGEETY----ADGSMFLWNF 185

[Close]
BLAST of Cp4.1LG04g11170 vs. TAIR10
Match: AT1G74930.1 (AT1G74930.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 141.7 bits (356), Expect = 4.8e-34
Identity = 96/209 (45.93%), Postives = 121/209 (57.89%), Query Frame = 1 

Query: 1   MAKPSSPHKSAAHNT--DSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAF 60
           M K +   +    NT   S+YKGVR+RKWGK+VSEIRLP+SRERIWLGSYD+ EKAARAF
Sbjct: 1   MVKQAMKEEEKKRNTAMQSKYKGVRKRKWGKWVSEIRLPHSRERIWLGSYDTPEKAARAF 60

Query: 61  DAALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANS--DPSPSTEYSQPIVD 120
           DAA FCLRG  A FNFPNNPP I     L+  EIQ  AA+FAN+  D     E S  +  
Sbjct: 61  DAAQFCLRGGDANFNFPNNPPSISVEKSLTPPEIQEAAARFANTFQDIVKGEEESGLVPG 120

Query: 121 S----PSPSIASELTTAVTECEEISSFLDFHTNMGLGPDNYGSEFGSFLPEYNPFFDEIF 180
           S     SPS ++ + T+  + +   SFLD      L P N+G  F SF  +++ F     
Sbjct: 121 SEIRPESPSTSASVATSTVDYD--FSFLD------LLPMNFG--FDSFSDDFSGFSGGDR 180

Query: 181 NSSTAPCFDYGDENFDAMTTHQDLFLWNF 202
            +   P  DYG E+       + L LW+F
Sbjct: 181 FTEILPIEDYGGESL----LDESLILWDF 195

[Close]
BLAST of Cp4.1LG04g11170 vs. TAIR10
Match: AT5G21960.1 (AT5G21960.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 131.3 bits (329), Expect = 6.5e-31
Identity = 78/165 (47.27%), Postives = 99/165 (60.00%), Query Frame = 1 

Query: 18  RYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGSSARFNFPNN 77
           +Y GVR+RKWGK+V+EIRLPNSR+RIWLGS+DSAEKAARAFDAAL+CLRG  ARFNFP+N
Sbjct: 6   KYTGVRKRKWGKWVAEIRLPNSRDRIWLGSFDSAEKAARAFDAALYCLRGPGARFNFPDN 65

Query: 78  PPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSPSIASELTTAVTECEEIS 137
           PP+IPG   L+  +IQ VA++FA  +     E   P    P     +E    ++   EI+
Sbjct: 66  PPEIPGGRSLTPQQIQVVASRFACEEELLPPEQHHP--SPPRGDHNTEEEVIISARGEIN 125

Query: 138 SFLDFHTNMGLGPDNYGSEFGSFLPEYNPFFDEIFNSSTAPCFDY 183
           S     T   +G DN      +    Y P   E  N    P  D+
Sbjct: 126 SGSGGPTLGQVGEDNNNEGNSNDTSSYWPLIWEEENFVGPPNSDH 168

[Close]
BLAST of Cp4.1LG04g11170 vs. TAIR10
Match: AT4G31060.1 (AT4G31060.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 103.6 bits (257), Expect = 1.4e-22
Identity = 60/123 (48.78%), Postives = 81/123 (65.85%), Query Frame = 1 

Query: 19  YKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGSSARFNFP-NN 78
           Y+GVR+R WGK+VSEIR+P +  RIWLGSYD+ EKAARA+DAALFC+RG    +NFP + 
Sbjct: 27  YRGVRKRSWGKWVSEIRVPKTGRRIWLGSYDAPEKAARAYDAALFCIRGEKGVYNFPTDK 86

Query: 79  PPDIPGATL--LSRAEIQTVAAQFANSDPS-PSTEYSQPIVDS-PSPSIASELTTAVTEC 137
            P +P  ++  LS+ +IQT+A  +A+S    PS   + P     PS   AS   +A TE 
Sbjct: 87  KPQLPEGSVRPLSKLDIQTIATNYASSVVHVPSHATTLPATTQVPSEVPASSDVSASTEI 146

[Close]
BLAST of Cp4.1LG04g11170 vs. TAIR10
Match: AT1G77640.1 (AT1G77640.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 103.6 bits (257), Expect = 1.4e-22
Identity = 82/227 (36.12%), Postives = 113/227 (49.78%), Query Frame = 1 

Query: 5   SSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFC 64
           S+    +  N   +YKGVR R WG +V+EIR PN + RIWLGSY +AE AARA+DAAL C
Sbjct: 29  SALRHQSCKNKIKKYKGVRMRSWGSWVTEIRAPNQKTRIWLGSYSTAEAAARAYDAALLC 88

Query: 65  LRGSSARFNFPN----NP--PDIPGATLLSRAEIQTVAAQFANSD------PSPSTEYSQ 124
           L+G  A  NFPN    +P   +I   TLLS   IQ VAAQ ANS       PS   ++  
Sbjct: 89  LKGPKANLNFPNITTTSPFLMNIDEKTLLSPKSIQKVAAQAANSSSDHFTPPSDENDHDH 148

Query: 125 PIVDSPSPSIASELTTAVTECEE-----------ISSFLDFHTNMGL-GPDNYGSEFGSF 184
                  PS +S   ++  + +            + SF+D++ ++ L  P  Y  EFG  
Sbjct: 149 DDGLDHHPSASSSAASSPPDDDHHNDDDGDLVSLMESFVDYNEHVSLMDPSLY--EFG-- 208

Query: 185 LPEYNPFFDEIFNSSTAPCFDYGDENFDAMTTHQDLF------LWNF 202
                   +EIF ++  P FDY  +   +  T  D +      LW+F
Sbjct: 209 -------HNEIFFTNGDP-FDYSPQLHSSEATMDDFYDDVDIPLWSF 243

[Close]
BLAST of Cp4.1LG04g11170 vs. NCBI nr
Match: gi|449452608|ref|XP_004144051.1| (PREDICTED: ethylene-responsive transcription factor ERF017 [Cucumis sativus])

HSP 1 Score: 277.7 bits (709), Expect = 1.6e-71
Identity = 149/209 (71.29%), Postives = 171/209 (81.82%), Query Frame = 1 

Query: 1   MAKPSSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDA 60
           M KPSS   +A   +DSRYKGVRRRKWGK+VSEIRLPNSRERIWLGSYDSAEKAARAFDA
Sbjct: 1   MTKPSSA-AAALDTSDSRYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDA 60

Query: 61  ALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQP-IVDSPS 120
           ALFCLRG SARFNFP NPP+IP ATLLSR+EIQ+VAAQFANSDP PS+E+ +P   DSPS
Sbjct: 61  ALFCLRGRSARFNFPQNPPEIPDATLLSRSEIQSVAAQFANSDPIPSSEFHRPTTTDSPS 120

Query: 121 PSIASELTTAVTECEEISSFLDFHTNMGLGPDNYGSEFGSFLPEYNPFFDEIF-----NS 180
           PS+ SE+TT+V EC+E S FLD HT M  G DNYG++FG F PEYNPF++E+F     +S
Sbjct: 121 PSLVSEMTTSVIECDERSLFLDLHTAM--GSDNYGTDFGLF-PEYNPFYNELFINSSSSS 180

Query: 181 STAPCFDYGDENFDAMTTHQD--LFLWNF 202
           ST PC+DYGDE F+A  THQD   +LWNF
Sbjct: 181 STIPCYDYGDEIFEA--THQDDSSYLWNF 203

[Close]
BLAST of Cp4.1LG04g11170 vs. NCBI nr
Match: gi|659100153|ref|XP_008450955.1| (PREDICTED: ethylene-responsive transcription factor ERF017-like [Cucumis melo])

HSP 1 Score: 265.4 bits (677), Expect = 8.2e-68
Identity = 149/214 (69.63%), Postives = 173/214 (80.84%), Query Frame = 1 

Query: 1   MAKPSSPHKSAAHNT-DSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFD 60
           M KPSS    AA +T DSRYKGVRRRKWGK+VSEIRLPNSRERIWLGSYDSAEKAARAFD
Sbjct: 1   MTKPSSAAADAAVDTSDSRYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFD 60

Query: 61  AALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPS-PSTEYSQP-IVDS 120
           AALFCLRG SARFNFP+NPPDIPGA+LLSR+EIQ+ AAQFANSDP+ PS+E+ +P   DS
Sbjct: 61  AALFCLRGDSARFNFPDNPPDIPGASLLSRSEIQSAAAQFANSDPTIPSSEFHRPTTADS 120

Query: 121 PSPSIASELTTAVTECEEISSFLDFHTNMGLGPDNYGSEFGSFLPE--YNPFFDEIF--- 180
           PSPS+ SE+TT+V EC+E S F D HT M  G +NY ++FG F PE  YNPF++E+F   
Sbjct: 121 PSPSVVSEMTTSVIECDERSPFFDLHTAM--GSENYVTDFGLF-PEYSYNPFYNEMFINS 180

Query: 181 --NSSTAPCFD-YGDENFDAMTTHQD--LFLWNF 202
             +SST PC+D YGDENF+A  THQD   +LWNF
Sbjct: 181 SSSSSTIPCYDYYGDENFEA--THQDDSSYLWNF 209

[Close]
BLAST of Cp4.1LG04g11170 vs. NCBI nr
Match: gi|641855042|gb|KDO73836.1| (hypothetical protein CISIN_1g029068mg [Citrus sinensis])

HSP 1 Score: 192.6 bits (488), Expect = 6.7e-46
Identity = 108/194 (55.67%), Postives = 131/194 (67.53%), Query Frame = 1 

Query: 12  AHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGSSAR 71
           A  +DSRYKGVR+RKWGK+VSEIRLPNSR RIWLGSYD+AEKAARAFDAALFCLRG SA+
Sbjct: 10  AERSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 69

Query: 72  FNFPNNPPDIPGATLLSRAEIQTVAAQFANSDP----SPSTEYSQPIVDSPSPSIASELT 131
           FNFP+NPPDI G   L  +EIQ VAAQFANS+P    SP    S+   +  SPSI+    
Sbjct: 70  FNFPDNPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVSELQTEYLSPSISEATV 129

Query: 132 TAVTECEEISSFLDFHTNMGLGPDNYGSEFGSFLPEYNPFFDEIFNSSTAPCFDYGDENF 191
              ++     S LD  T      +NY SE+G F P ++   ++IF +   P  D+ DENF
Sbjct: 130 QLDSDGVFDGSLLDLLT--ASSSNNYPSEYGIF-PGFDDLSNDIF-TPQLPAVDFADENF 189

Query: 192 DAMTTHQDLFLWNF 202
           D +  +QD FLWNF
Sbjct: 190 DGLLLNQDSFLWNF 199

[Close]
BLAST of Cp4.1LG04g11170 vs. NCBI nr
Match: gi|567921698|ref|XP_006452855.1| (hypothetical protein CICLE_v10009540mg [Citrus clementina])

HSP 1 Score: 192.6 bits (488), Expect = 6.7e-46
Identity = 108/194 (55.67%), Postives = 131/194 (67.53%), Query Frame = 1 

Query: 12  AHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGSSAR 71
           A  +DSRYKGVR+RKWGK+VSEIRLPNSR RIWLGSYD+AEKAARAFDAALFCLRG SA+
Sbjct: 10  AEGSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 69

Query: 72  FNFPNNPPDIPGATLLSRAEIQTVAAQFANSDP----SPSTEYSQPIVDSPSPSIASELT 131
           FNFP+NPPDI G   L  +EIQ VAAQFANS+P    SP    S+   +  SPSI+    
Sbjct: 70  FNFPDNPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVSELQTEYLSPSISEATV 129

Query: 132 TAVTECEEISSFLDFHTNMGLGPDNYGSEFGSFLPEYNPFFDEIFNSSTAPCFDYGDENF 191
              ++     S LD  T      +NY SE+G F P ++   ++IF +   P  D+ DENF
Sbjct: 130 QLDSDGVFDGSLLDLLT--ASSSNNYPSEYGIF-PGFDDLSNDIF-TPQLPAVDFADENF 189

Query: 192 DAMTTHQDLFLWNF 202
           D +  +QD FLWNF
Sbjct: 190 DGLLLNQDSFLWNF 199

[Close]
BLAST of Cp4.1LG04g11170 vs. NCBI nr
Match: gi|568841497|ref|XP_006474695.1| (PREDICTED: ethylene-responsive transcription factor ERF017 [Citrus sinensis])

HSP 1 Score: 192.6 bits (488), Expect = 6.7e-46
Identity = 110/197 (55.84%), Postives = 129/197 (65.48%), Query Frame = 1 

Query: 12  AHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGSSAR 71
           A  +DSRYKGVR+RKWGK+VSEIRLPNSR RIWLGSYD+AEKAARAFDAALFCLRG SA+
Sbjct: 10  AERSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 69

Query: 72  FNFPNNPPDIPGATLLSRAEIQTVAAQFANSDP----SPSTEYSQPIVDSPSPSIASELT 131
           FNFP+NPPDI G   L  +EIQ VAAQFANS+P    SP    S+   +  SPSI+    
Sbjct: 70  FNFPDNPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVSELQTEYLSPSISEATV 129

Query: 132 TAVTECEEISSFLDFHTNMGLGPDNYGSEFGSFLPEYNPFFDEIFNSSTA---PCFDYGD 191
              ++     S LD  T       NY SE+G F     P FD++ N   A   P  D+ D
Sbjct: 130 QLDSDGVFDGSLLDLLT--ASSSSNYPSEYGIF-----PGFDDLSNDIFAPQLPAVDFAD 189

Query: 192 ENFDAMTTHQDLFLWNF 202
           ENFD +  +QD FLWNF
Sbjct: 190 ENFDGLLLNQDSFLWNF 199

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g11170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF17_ARATH1.5e-3748.00Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana GN=ERF01... [more]
ERF18_ARATH8.5e-3345.93Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana GN=ERF01... [more]
ERF16_ARATH1.2e-2947.27Ethylene-responsive transcription factor ERF016 OS=Arabidopsis thaliana GN=ERF01... [more]
ERF15_ARATH2.6e-2148.78Ethylene-responsive transcription factor ERF015 OS=Arabidopsis thaliana GN=ERF01... [more]
ERF13_ARATH2.6e-2136.12Ethylene-responsive transcription factor ERF013 OS=Arabidopsis thaliana GN=ERF01... [more]
BLAST of Cp4.1LG04g11170 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M292_CUCSA1.1e-7171.29Uncharacterized protein OS=Cucumis sativus GN=Csa_1G597730 PE=4 SV=1[more]
V4UP47_9ROSI4.7e-4655.67Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009540mg PE=4 SV=1[more]
A0A067GEQ1_CITSI4.7e-4655.67Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029068mg PE=4 SV=1[more]
W6FFV7_9ROSA4.4e-4454.04Dehydration responsive element binding transcription factor OS=Morus notabilis G... [more]
V7AZA1_PHAVU7.5e-4450.00Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G225000g PE=4 SV=1[more]
BLAST of Cp4.1LG04g11170 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G19210.18.4e-3948.00 Integrase-type DNA-binding superfamily protein[more]
AT1G74930.14.8e-3445.93 Integrase-type DNA-binding superfamily protein[more]
AT5G21960.16.5e-3147.27 Integrase-type DNA-binding superfamily protein[more]
AT4G31060.11.4e-2248.78 Integrase-type DNA-binding superfamily protein[more]
AT1G77640.11.4e-2236.12 Integrase-type DNA-binding superfamily protein[more]
BLAST of Cp4.1LG04g11170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449452608|ref|XP_004144051.1|1.6e-7171.29PREDICTED: ethylene-responsive transcription factor ERF017 [Cucumis sativus][more]
gi|659100153|ref|XP_008450955.1|8.2e-6869.63PREDICTED: ethylene-responsive transcription factor ERF017-like [Cucumis melo][more]
gi|641855042|gb|KDO73836.1|6.7e-4655.67hypothetical protein CISIN_1g029068mg [Citrus sinensis][more]
gi|567921698|ref|XP_006452855.1|6.7e-4655.67hypothetical protein CICLE_v10009540mg [Citrus clementina][more]
gi|568841497|ref|XP_006474695.1|6.7e-4655.84PREDICTED: ethylene-responsive transcription factor ERF017 [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g11170.1Cp4.1LG04g11170.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 19..30
score: 7.8E-9coord: 41..57
score: 7.
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 18..76
score: 1.5
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 17..67
score: 9.5
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 18..81
score: 1.4
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 18..75
score: 21
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 17..76
score: 3.86
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 14..201
score: 2.3
NoneNo IPR availablePANTHERPTHR31985:SF34ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF018coord: 14..201
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g11170Cucsa.141980Cucumber (Gy14) v1cgycpeB0385
Cp4.1LG04g11170CmaCh10G007850Cucurbita maxima (Rimu)cmacpeB093
Cp4.1LG04g11170CmaCh11G007540Cucurbita maxima (Rimu)cmacpeB153
Cp4.1LG04g11170CmoCh10G008120Cucurbita moschata (Rifu)cmocpeB069
Cp4.1LG04g11170CmoCh11G007650Cucurbita moschata (Rifu)cmocpeB129
Cp4.1LG04g11170Cla011139Watermelon (97103) v1cpewmB642
Cp4.1LG04g11170Csa1G597730Cucumber (Chinese Long) v2cpecuB652
Cp4.1LG04g11170MELO3C015543Melon (DHL92) v3.5.1cpemeB620
Cp4.1LG04g11170ClCG03G014830Watermelon (Charleston Gray)cpewcgB599
Cp4.1LG04g11170CSPI01G28930Wild cucumber (PI 183967)cpecpiB655
Cp4.1LG04g11170Lsi06G003590Bottle gourd (USVL1VR-Ls)cpelsiB563
Cp4.1LG04g11170MELO3C016927.2Melon (DHL92) v3.6.1cpemedB768
Cp4.1LG04g11170MELO3C015543.2Melon (DHL92) v3.6.1cpemedB733
Cp4.1LG04g11170CsaV3_1G041310Cucumber (Chinese Long) v3cpecucB0813
Cp4.1LG04g11170CsaV3_4G036190Cucumber (Chinese Long) v3cpecucB0848
Cp4.1LG04g11170Bhi02G001487Wax gourdcpewgoB0882
Cp4.1LG04g11170Bhi09G002518Wax gourdcpewgoB0875
Cp4.1LG04g11170CsGy4G024180Cucumber (Gy14) v2cgybcpeB557
Cp4.1LG04g11170CsGy1G028150Cucumber (Gy14) v2cgybcpeB125
Cp4.1LG04g11170Carg12941Silver-seed gourdcarcpeB0141
Cp4.1LG04g11170Carg25205Silver-seed gourdcarcpeB0707
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG04g11170Cp4.1LG18g02740Cucurbita pepo (Zucchini)cpecpeB360
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g11170Cucurbita pepo (Zucchini)cpecpeB502
Cp4.1LG04g11170Cucurbita moschata (Rifu)cmocpeB170
Cp4.1LG04g11170Silver-seed gourdcarcpeB1247