Carg12941 (gene) Silver-seed gourd

Overview
NameCarg12941
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionEthylene-responsive transcription factor
LocationCucurbita_argyrosperma_scaffold_052 : 222065 .. 222682 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGAAGCCGCCGTCCCCATCCACCGCCTCGGCCGCTTCCGCCGCCGCCGACAGTCCCGATTCACGGTACAAGGGTGTACGCCGTCGCAAGTGGGGCAAGTGGGTCTCCGAAATCCGCCTCCCCAACAGCCGCGAACGTATCTGGTTAGGCTCATATGATTCAGCCGAGAAAGCCGCGCGTGCATTCGACGCGGCGCTTTTTTGCCTACGTGGCCGCACCGCTCGCTTCAATTTCCCTAATAACCCACCGGAGATCGCCGGTGCCAGTTTACTCTCAAGAGCAGAGATTCAATCCGTGGCAGCTCAGTTCGCTAACTCCAACCCCCCGCCGCCGCCTTCGTCGGAATGCACCCAACCCACCATTGGTTCTCCGTCGCCGTCGCCGTCGCCATCGGTAGTTTCAGAAGCGACCACCGCCGTGATTGAAGAAAGATCGACATTTTTGGATCTTTCGACAGCGATGGGATCCGGGAATTACGGGTCGGAATTCGGGTTGTTTCCGGAATATAACCCGTTTTTCAACGAATTGATGAACACTACAAATTCTGGAGCTCCTTTTTTTGATTATGGAGATGAGAATTTGGACGATCAGGATTCGTTCCTCTGGAACTTCTGA

mRNA sequence

ATGACGAAGCCGCCGTCCCCATCCACCGCCTCGGCCGCTTCCGCCGCCGCCGACAGTCCCGATTCACGGTACAAGGGTGTACGCCGTCGCAAGTGGGGCAAGTGGGTCTCCGAAATCCGCCTCCCCAACAGCCGCGAACGTATCTGGTTAGGCTCATATGATTCAGCCGAGAAAGCCGCGCGTGCATTCGACGCGGCGCTTTTTTGCCTACGTGGCCGCACCGCTCGCTTCAATTTCCCTAATAACCCACCGGAGATCGCCGGTGCCAGTTTACTCTCAAGAGCAGAGATTCAATCCGTGGCAGCTCAGTTCGCTAACTCCAACCCCCCGCCGCCGCCTTCGTCGGAATGCACCCAACCCACCATTGGTTCTCCGTCGCCGTCGCCGTCGCCATCGGTAGTTTCAGAAGCGACCACCGCCGTGATTGAAGAAAGATCGACATTTTTGGATCTTTCGACAGCGATGGGATCCGGGAATTACGGGTCGGAATTCGGGTTGTTTCCGGAATATAACCCGTTTTTCAACGAATTGATGAACACTACAAATTCTGGAGCTCCTTTTTTTGATTATGGAGATGAGAATTTGGACGATCAGGATTCGTTCCTCTGGAACTTCTGA

Coding sequence (CDS)

ATGACGAAGCCGCCGTCCCCATCCACCGCCTCGGCCGCTTCCGCCGCCGCCGACAGTCCCGATTCACGGTACAAGGGTGTACGCCGTCGCAAGTGGGGCAAGTGGGTCTCCGAAATCCGCCTCCCCAACAGCCGCGAACGTATCTGGTTAGGCTCATATGATTCAGCCGAGAAAGCCGCGCGTGCATTCGACGCGGCGCTTTTTTGCCTACGTGGCCGCACCGCTCGCTTCAATTTCCCTAATAACCCACCGGAGATCGCCGGTGCCAGTTTACTCTCAAGAGCAGAGATTCAATCCGTGGCAGCTCAGTTCGCTAACTCCAACCCCCCGCCGCCGCCTTCGTCGGAATGCACCCAACCCACCATTGGTTCTCCGTCGCCGTCGCCGTCGCCATCGGTAGTTTCAGAAGCGACCACCGCCGTGATTGAAGAAAGATCGACATTTTTGGATCTTTCGACAGCGATGGGATCCGGGAATTACGGGTCGGAATTCGGGTTGTTTCCGGAATATAACCCGTTTTTCAACGAATTGATGAACACTACAAATTCTGGAGCTCCTTTTTTTGATTATGGAGATGAGAATTTGGACGATCAGGATTCGTTCCTCTGGAACTTCTGA

Protein sequence

MTKPPSPSTASAASAAADSPDSRYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGRTARFNFPNNPPEIAGASLLSRAEIQSVAAQFANSNPPPPPSSECTQPTIGSPSPSPSPSVVSEATTAVIEERSTFLDLSTAMGSGNYGSEFGLFPEYNPFFNELMNTTNSGAPFFDYGDENLDDQDSFLWNF
Homology
[Close]
BLAST of Carg12941 vs. NCBI nr
Match: XP_023516760.1 (ethylene-responsive transcription factor ERF017-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 316.2 bits (809), Expect = 8.0e-83
Identity = 185/205 (90.24%), Postives = 185/205 (90.24%), Query Frame = 0 

Query: 1   MTKPPSXXXXXXXXXXXXXXXXRYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAA 60
           MTKPPSXXXXXXXXXXXXXXXXRYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAA
Sbjct: 1   MTKPPSXXXXXXXXXXXXXXXXRYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAA 60

Query: 61  RAFDAALFCLRGRTARFNFPNNPPEIAGASLLSRAEIQSVAAQFANSXXXXXXXXXXXXX 120
           RAFDAALFCLRGRTARFNFPNNPPEIAGASLLSRAEIQSVAAQFANS             
Sbjct: 61  RAFDAALFCLRGRTARFNFPNNPPEIAGASLLSRAEIQSVAAQFANSNPLPPPSSECTQP 120

Query: 121 XXXXXXXXXXXXVVSEATTAVIEERSTFLDLSTAMGSGNYGSEFGLFPEYNPFFNELMNT 180
                XXXXXXX VSE TTAVIEERSTFLDLSTAMGSGNYGSEFGLFPEYNPFFNELMNT
Sbjct: 121 TIGSPXXXXXXXXVSETTTAVIEERSTFLDLSTAMGSGNYGSEFGLFPEYNPFFNELMNT 180

Query: 181 TNSGAPFFDYGDENLDDQDSFLWNF 206
           TNSGAPFFDYGDENLDDQDSFLWNF
Sbjct: 181 TNSGAPFFDYGDENLDDQDSFLWNF 205

[Close]
BLAST of Carg12941 vs. NCBI nr
Match: XP_022961075.1 (ethylene-responsive transcription factor ERF017 [Cucurbita moschata])

HSP 1 Score: 315.5 bits (807), Expect = 1.4e-82
Identity = 187/205 (91.22%), Postives = 187/205 (91.22%), Query Frame = 0 

Query: 1   MTKPPSXXXXXXXXXXXXXXXXRYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAA 60
           MTKPPSXXXXXXXXXXXXXXXXRYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAA
Sbjct: 1   MTKPPSXXXXXXXXXXXXXXXXRYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAA 60

Query: 61  RAFDAALFCLRGRTARFNFPNNPPEIAGASLLSRAEIQSVAAQFANSXXXXXXXXXXXXX 120
           RAFDAALFCLRGRTARFNFPNNPPEIAGASLLSRAEIQSVAAQFANS   XXXXXXX   
Sbjct: 61  RAFDAALFCLRGRTARFNFPNNPPEIAGASLLSRAEIQSVAAQFANS--NXXXXXXXECT 120

Query: 121 XXXXXXXXXXXXVVSEATTAVIEERSTFLDLSTAMGSGNYGSEFGLFPEYNPFFNELMNT 180
                       VVSEATTAVIEERSTFLDLSTAMGSGNYGSEFGLFPEYNPFFNELMNT
Sbjct: 121 QPTIGSPSPSPSVVSEATTAVIEERSTFLDLSTAMGSGNYGSEFGLFPEYNPFFNELMNT 180

Query: 181 TNSGAPFFDYGDENLDDQDSFLWNF 206
           TNSGAPFFDYGDENLDDQDSFLWNF
Sbjct: 181 TNSGAPFFDYGDENLDDQDSFLWNF 203

[Close]
BLAST of Carg12941 vs. NCBI nr
Match: XP_022987452.1 (ethylene-responsive transcription factor ERF017-like [Cucurbita maxima])

HSP 1 Score: 310.5 bits (794), Expect = 4.4e-81
Identity = 181/183 (98.91%), Postives = 182/183 (99.45%), Query Frame = 0 

Query: 23  RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGRTARFNFPNN 82
           RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDA LFCLRGRTARFNFPNN
Sbjct: 21  RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAGLFCLRGRTARFNFPNN 80

Query: 83  PPEIAGASLLSRAEIQSVAAQFANSXXXXXXXXXXXXXXXXXXXXXXXXXVVSEATTAVI 142
           PPEIAGASLLSRAEIQSVAAQFANSXXXXXXXXXXXXXXXXXXXXXXXXXVVSEATTAVI
Sbjct: 81  PPEIAGASLLSRAEIQSVAAQFANSXXXXXXXXXXXXXXXXXXXXXXXXXVVSEATTAVI 140

Query: 143 EERSTFLDLSTAMGSGNYGSEFGLFPEYNPFFNELMNTTNSGAPFFDYGDENLDDQDSFL 202
           EERSTFLDLSTAMGSGNYGSEFGLFPEYNPFFN+LMNTTNSGAPFFDYGDENLDDQDSFL
Sbjct: 141 EERSTFLDLSTAMGSGNYGSEFGLFPEYNPFFNDLMNTTNSGAPFFDYGDENLDDQDSFL 200

Query: 203 WNF 206
           WNF
Sbjct: 201 WNF 203

[Close]
BLAST of Carg12941 vs. NCBI nr
Match: XP_022147536.1 (ethylene-responsive transcription factor ERF017 [Momordica charantia])

HSP 1 Score: 248.4 bits (633), Expect = 2.0e-62
Identity = 134/188 (71.28%), Postives = 142/188 (75.53%), Query Frame = 0 

Query: 23  RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGRTARFNFPNN 82
           RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGR+ARFNFP+N
Sbjct: 20  RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGRSARFNFPDN 79

Query: 83  PPEIAGASLLSRAEIQSVAAQFANSXXXXXXXXXXXXXXXXXXXXXXXXXVVSEATTAVI 142
           PP+I GASLLSRAEIQS AA+FANS                           +  TTA I
Sbjct: 80  PPDIPGASLLSRAEIQSAAAEFANS----------------EPQPSSEDSASASGTTAQI 139

Query: 143 E--ERSTFLDLSTAMGSGNYGSEFGLFPEYNPFFNELMNTTNSGAPFFDYGDENLD---D 202
           E  ERS+FLDL TAMGS NYGS+FGLFPEYNPFFNEL NT+   AP FDYGDEN D    
Sbjct: 140 ECDERSSFLDLHTAMGSENYGSDFGLFPEYNPFFNELFNTS---APSFDYGDENFDATTH 188

Query: 203 QDSFLWNF 206
           QDSFLWNF
Sbjct: 200 QDSFLWNF 188

[Close]
BLAST of Carg12941 vs. NCBI nr
Match: XP_004144051.1 (PREDICTED: ethylene-responsive transcription factor ERF017 [Cucumis sativus] >KGN66326.1 hypothetical protein Csa_1G597730 [Cucumis sativus])

HSP 1 Score: 237.3 bits (604), Expect = 4.7e-59
Identity = 128/192 (66.67%), Postives = 143/192 (74.48%), Query Frame = 0 

Query: 23  RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGRTARFNFPNN 82
           RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGR+ARFNFP N
Sbjct: 17  RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGRSARFNFPQN 76

Query: 83  PPEIAGASLLSRAEIQSVAAQFANSXXXXXXXXXXXXXXXXXXXXXXXXXVVSEATTAVI 142
           PPEI  A+LLSR+EIQSVAAQFANS                         +VSE TT+VI
Sbjct: 77  PPEIPDATLLSRSEIQSVAAQFANS-----DPIPSSEFHRPTTTDSPSPSLVSEMTTSVI 136

Query: 143 E--ERSTFLDLSTAMGSGNYGSEFGLFPEYNPFFNELM---NTTNSGAPFFDYGDENLD- 202
           E  ERS FLDL TAMGS NYG++FGLFPEYNPF+NEL    ++++S  P +DYGDE  + 
Sbjct: 137 ECDERSLFLDLHTAMGSDNYGTDFGLFPEYNPFYNELFINSSSSSSTIPCYDYGDEIFEA 196

Query: 203 ---DQDSFLWNF 206
              D  S+LWNF
Sbjct: 197 THQDDSSYLWNF 203

[Close]
BLAST of Carg12941 vs. TAIR10
Match: AT1G19210.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 174.1 bits (440), Expect = 8.9e-44
Identity = 93/191 (48.69%), Postives = 118/191 (61.78%), Query Frame = 0 

Query: 23  RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGRTARFNFPNN 82
           +YKGVR+RKWGKWVSEIRLPNSRERIWLGSYD+ EKAARAFDAAL+CLRG  A+FNFP+N
Sbjct: 11  KYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGNNAKFNFPDN 70

Query: 83  PPEIAGASLLSRAEIQSVAAQFANSXXXXXXXXXXXXXXXXXXXXXXXXXVVSEATTAVI 142
           PP I+G   LSR+EI+  AA+FANS                         +  E+ +  +
Sbjct: 71  PPVISGGRNLSRSEIREAAARFANS-------------AEDDSSGGAGYEIRQESASTSM 130

Query: 143 EERSTFLDLSTAMGSGNYGSEFGLFPEYNPF--------FNELMNTTNSGAPFFDYGDEN 202
           +  S FL +   +GSGN+ SEFGLFP ++ F        F E ++ T     ++  G+E 
Sbjct: 131 DVDSEFLSMLPTVGSGNFASEFGLFPGFDDFSDEYSGDRFREQLSPTQD---YYQLGEET 185

Query: 203 LDDQDSFLWNF 206
             D   FLWNF
Sbjct: 191 YADGSMFLWNF 185

[Close]
BLAST of Carg12941 vs. TAIR10
Match: AT1G74930.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 145.2 bits (365), Expect = 4.4e-35
Identity = 83/184 (45.11%), Postives = 103/184 (55.98%), Query Frame = 0 

Query: 23  RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGRTARFNFPNN 82
           +YKGVR+RKWGKWVSEIRLP+SRERIWLGSYD+ EKAARAFDAA FCLRG  A FNFPNN
Sbjct: 20  KYKGVRKRKWGKWVSEIRLPHSRERIWLGSYDTPEKAARAFDAAQFCLRGGDANFNFPNN 79

Query: 83  PPEIAGASLLSRAEIQSVAAQFANSXXXXXXXXXXXXXXXXXXXXXXXXXVVSEATTAVI 142
           PP I+    L+  EIQ  AA+FAN+                           +   T+ +
Sbjct: 80  PPSISVEKSLTPPEIQEAAARFANTFQDIVKGEEESGLVPGSEIRPESPSTSASVATSTV 139

Query: 143 EERSTFLD-LSTAMGSGNYGSEFGLFPEYNPFFNELMNTTNSGAPFFDYGDENLDDQDSF 202
           +   +FLD L    G  ++  +F  F   + F   L        P  DYG E+L D+   
Sbjct: 140 DYDFSFLDLLPMNFGFDSFSDDFSGFSGGDRFTEIL--------PIEDYGGESLLDESLI 195

Query: 203 LWNF 206
           LW+F
Sbjct: 200 LWDF 195

[Close]
BLAST of Carg12941 vs. TAIR10
Match: AT5G21960.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 134.4 bits (337), Expect = 7.8e-32
Identity = 62/83 (74.70%), Postives = 73/83 (87.95%), Query Frame = 0 

Query: 23  RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGRTARFNFPNN 82
           +Y GVR+RKWGKWV+EIRLPNSR+RIWLGS+DSAEKAARAFDAAL+CLRG  ARFNFP+N
Sbjct: 6   KYTGVRKRKWGKWVAEIRLPNSRDRIWLGSFDSAEKAARAFDAALYCLRGPGARFNFPDN 65

Query: 83  PPEIAGASLLSRAEIQSVAAQFA 106
           PPEI G   L+  +IQ VA++FA
Sbjct: 66  PPEIPGGRSLTPQQIQVVASRFA 88

[Close]
BLAST of Carg12941 vs. TAIR10
Match: AT4G31060.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 105.5 bits (262), Expect = 3.9e-23
Identity = 49/87 (56.32%), Postives = 67/87 (77.01%), Query Frame = 0 

Query: 24  YKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGRTARFNFP-NN 83
           Y+GVR+R WGKWVSEIR+P +  RIWLGSYD+ EKAARA+DAALFC+RG    +NFP + 
Sbjct: 27  YRGVRKRSWGKWVSEIRVPKTGRRIWLGSYDAPEKAARAYDAALFCIRGEKGVYNFPTDK 86

Query: 84  PPEIAGASL--LSRAEIQSVAAQFANS 108
            P++   S+  LS+ +IQ++A  +A+S
Sbjct: 87  KPQLPEGSVRPLSKLDIQTIATNYASS 113

[Close]
BLAST of Carg12941 vs. TAIR10
Match: AT1G77640.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 95.5 bits (236), Expect = 4.0e-20
Identity = 50/86 (58.14%), Postives = 58/86 (67.44%), Query Frame = 0 

Query: 23  RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGRTARFNFPN- 82
           +YKGVR R WG WV+EIR PN + RIWLGSY +AE AARA+DAAL CL+G  A  NFPN 
Sbjct: 42  KYKGVRMRSWGSWVTEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGPKANLNFPNI 101

Query: 83  ---NP--PEIAGASLLSRAEIQSVAA 103
              +P    I   +LLS   IQ VAA
Sbjct: 102 TTTSPFLMNIDEKTLLSPKSIQKVAA 127

[Close]
BLAST of Carg12941 vs. Swiss-Prot
Match: sp|Q84QC2|ERF17_ARATH (Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana OX=3702 GN=ERF017 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.6e-42
Identity = 93/191 (48.69%), Postives = 118/191 (61.78%), Query Frame = 0 

Query: 23  RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGRTARFNFPNN 82
           +YKGVR+RKWGKWVSEIRLPNSRERIWLGSYD+ EKAARAFDAAL+CLRG  A+FNFP+N
Sbjct: 11  KYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGNNAKFNFPDN 70

Query: 83  PPEIAGASLLSRAEIQSVAAQFANSXXXXXXXXXXXXXXXXXXXXXXXXXVVSEATTAVI 142
           PP I+G   LSR+EI+  AA+FANS                         +  E+ +  +
Sbjct: 71  PPVISGGRNLSRSEIREAAARFANS-------------AEDDSSGGAGYEIRQESASTSM 130

Query: 143 EERSTFLDLSTAMGSGNYGSEFGLFPEYNPF--------FNELMNTTNSGAPFFDYGDEN 202
           +  S FL +   +GSGN+ SEFGLFP ++ F        F E ++ T     ++  G+E 
Sbjct: 131 DVDSEFLSMLPTVGSGNFASEFGLFPGFDDFSDEYSGDRFREQLSPTQD---YYQLGEET 185

Query: 203 LDDQDSFLWNF 206
             D   FLWNF
Sbjct: 191 YADGSMFLWNF 185

[Close]
BLAST of Carg12941 vs. Swiss-Prot
Match: sp|Q9S7L5|ERF18_ARATH (Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana OX=3702 GN=ERF018 PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 8.0e-34
Identity = 83/184 (45.11%), Postives = 103/184 (55.98%), Query Frame = 0 

Query: 23  RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGRTARFNFPNN 82
           +YKGVR+RKWGKWVSEIRLP+SRERIWLGSYD+ EKAARAFDAA FCLRG  A FNFPNN
Sbjct: 20  KYKGVRKRKWGKWVSEIRLPHSRERIWLGSYDTPEKAARAFDAAQFCLRGGDANFNFPNN 79

Query: 83  PPEIAGASLLSRAEIQSVAAQFANSXXXXXXXXXXXXXXXXXXXXXXXXXVVSEATTAVI 142
           PP I+    L+  EIQ  AA+FAN+                           +   T+ +
Sbjct: 80  PPSISVEKSLTPPEIQEAAARFANTFQDIVKGEEESGLVPGSEIRPESPSTSASVATSTV 139

Query: 143 EERSTFLD-LSTAMGSGNYGSEFGLFPEYNPFFNELMNTTNSGAPFFDYGDENLDDQDSF 202
           +   +FLD L    G  ++  +F  F   + F   L        P  DYG E+L D+   
Sbjct: 140 DYDFSFLDLLPMNFGFDSFSDDFSGFSGGDRFTEIL--------PIEDYGGESLLDESLI 195

Query: 203 LWNF 206
           LW+F
Sbjct: 200 LWDF 195

[Close]
BLAST of Carg12941 vs. Swiss-Prot
Match: sp|Q9C591|ERF16_ARATH (Ethylene-responsive transcription factor ERF016 OS=Arabidopsis thaliana OX=3702 GN=ERF016 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.4e-30
Identity = 62/83 (74.70%), Postives = 73/83 (87.95%), Query Frame = 0 

Query: 23  RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGRTARFNFPNN 82
           +Y GVR+RKWGKWV+EIRLPNSR+RIWLGS+DSAEKAARAFDAAL+CLRG  ARFNFP+N
Sbjct: 6   KYTGVRKRKWGKWVAEIRLPNSRDRIWLGSFDSAEKAARAFDAALYCLRGPGARFNFPDN 65

Query: 83  PPEIAGASLLSRAEIQSVAAQFA 106
           PPEI G   L+  +IQ VA++FA
Sbjct: 66  PPEIPGGRSLTPQQIQVVASRFA 88

[Close]
BLAST of Carg12941 vs. Swiss-Prot
Match: sp|Q6NLD5|ERF15_ARATH (Ethylene-responsive transcription factor ERF015 OS=Arabidopsis thaliana OX=3702 GN=ERF015 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 7.0e-22
Identity = 49/87 (56.32%), Postives = 67/87 (77.01%), Query Frame = 0 

Query: 24  YKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGRTARFNFP-NN 83
           Y+GVR+R WGKWVSEIR+P +  RIWLGSYD+ EKAARA+DAALFC+RG    +NFP + 
Sbjct: 27  YRGVRKRSWGKWVSEIRVPKTGRRIWLGSYDAPEKAARAYDAALFCIRGEKGVYNFPTDK 86

Query: 84  PPEIAGASL--LSRAEIQSVAAQFANS 108
            P++   S+  LS+ +IQ++A  +A+S
Sbjct: 87  KPQLPEGSVRPLSKLDIQTIATNYASS 113

[Close]
BLAST of Carg12941 vs. Swiss-Prot
Match: sp|Q9CAP4|ERF13_ARATH (Ethylene-responsive transcription factor ERF013 OS=Arabidopsis thaliana OX=3702 GN=ERF013 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 7.3e-19
Identity = 50/86 (58.14%), Postives = 58/86 (67.44%), Query Frame = 0 

Query: 23  RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGRTARFNFPN- 82
           +YKGVR R WG WV+EIR PN + RIWLGSY +AE AARA+DAAL CL+G  A  NFPN 
Sbjct: 42  KYKGVRMRSWGSWVTEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGPKANLNFPNI 101

Query: 83  ---NP--PEIAGASLLSRAEIQSVAA 103
              +P    I   +LLS   IQ VAA
Sbjct: 102 TTTSPFLMNIDEKTLLSPKSIQKVAA 127

[Close]
BLAST of Carg12941 vs. TrEMBL
Match: tr|A0A0A0M292|A0A0A0M292_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G597730 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.1e-59
Identity = 128/192 (66.67%), Postives = 143/192 (74.48%), Query Frame = 0 

Query: 23  RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGRTARFNFPNN 82
           RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGR+ARFNFP N
Sbjct: 17  RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGRSARFNFPQN 76

Query: 83  PPEIAGASLLSRAEIQSVAAQFANSXXXXXXXXXXXXXXXXXXXXXXXXXVVSEATTAVI 142
           PPEI  A+LLSR+EIQSVAAQFANS                         +VSE TT+VI
Sbjct: 77  PPEIPDATLLSRSEIQSVAAQFANS-----DPIPSSEFHRPTTTDSPSPSLVSEMTTSVI 136

Query: 143 E--ERSTFLDLSTAMGSGNYGSEFGLFPEYNPFFNELM---NTTNSGAPFFDYGDENLD- 202
           E  ERS FLDL TAMGS NYG++FGLFPEYNPF+NEL    ++++S  P +DYGDE  + 
Sbjct: 137 ECDERSLFLDLHTAMGSDNYGTDFGLFPEYNPFYNELFINSSSSSSTIPCYDYGDEIFEA 196

Query: 203 ---DQDSFLWNF 206
              D  S+LWNF
Sbjct: 197 THQDDSSYLWNF 203

[Close]
BLAST of Carg12941 vs. TrEMBL
Match: tr|A0A1S3BRH5|A0A1S3BRH5_CUCME (ethylene-responsive transcription factor ERF017-like OS=Cucumis melo OX=3656 GN=LOC103492391 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.6e-55
Identity = 126/195 (64.62%), Postives = 142/195 (72.82%), Query Frame = 0 

Query: 23  RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGRTARFNFPNN 82
           RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRG +ARFNFP+N
Sbjct: 19  RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGDSARFNFPDN 78

Query: 83  PPEIAGASLLSRAEIQSVAAQFANSXXXXXXXXXXXXXXXXXXXXXXXXXVVSEATTAVI 142
           PP+I GASLLSR+EIQS AAQFANS                         VVSE TT+VI
Sbjct: 79  PPDIPGASLLSRSEIQSAAAQFANS----DPTIPSSEFHRPTTADSPSPSVVSEMTTSVI 138

Query: 143 E--ERSTFLDLSTAMGSGNYGSEFGLFPE--YNPFFNELM---NTTNSGAPFFD-YGDEN 202
           E  ERS F DL TAMGS NY ++FGLFPE  YNPF+NE+    ++++S  P +D YGDEN
Sbjct: 139 ECDERSPFFDLHTAMGSENYVTDFGLFPEYSYNPFYNEMFINSSSSSSTIPCYDYYGDEN 198

Query: 203 LD----DQDSFLWNF 206
            +    D  S+LWNF
Sbjct: 199 FEATHQDDSSYLWNF 209

[Close]
BLAST of Carg12941 vs. TrEMBL
Match: tr|A0A2I4HQR5|A0A2I4HQR5_9ROSI (ethylene-responsive transcription factor ERF017-like OS=Juglans regia OX=51240 GN=LOC109020467 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.7e-44
Identity = 105/194 (54.12%), Postives = 121/194 (62.37%), Query Frame = 0 

Query: 23  RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGRTARFNFPNN 82
           +YKGVR+RKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAAL CLRGRTA+FNFP N
Sbjct: 16  KYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALSCLRGRTAKFNFPEN 75

Query: 83  PPEIAGASLLSRAEIQSVAAQFANSXXXXXXXXXXXXXXXXXXXXXXXXXVVSEATT--- 142
           PPEIAG   L+  EIQ+ A++FANS                          VSE T    
Sbjct: 76  PPEIAGGRSLTPTEIQAAASRFANSMEPPKTSHSDPTGTDLLNESPSPS--VSEGTVQMG 135

Query: 143 --AVIEERSTFLDLSTAMGSGNYGSEFGLFPEYNPFFNELMNTTNSGAPFFDYGDENLD- 202
             A ++     LDL   +GSGNY S++G+FP ++ F NEL        P FDYG+EN D 
Sbjct: 136 SDAALDGSFLDLDLFRTIGSGNYASDYGIFPGFDDFTNELY---AQPLPSFDYGEENFDG 195

Query: 203 -----DQDSFLWNF 206
                   SFLWNF
Sbjct: 196 IVPESSSSSFLWNF 204

[Close]
BLAST of Carg12941 vs. TrEMBL
Match: tr|A7XUL4|A7XUL4_BROPA (Putative dehydration-responsive element binding protein OS=Broussonetia papyrifera OX=172644 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-43
Identity = 100/193 (51.81%), Postives = 121/193 (62.69%), Query Frame = 0 

Query: 23  RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGRTARFNFPNN 82
           RYKGVR+RKWGKWVSEIRLPNSR+RIWLGSYD+AEKAARAFDAALFCLRGRTA+FNFP N
Sbjct: 21  RYKGVRKRKWGKWVSEIRLPNSRDRIWLGSYDTAEKAARAFDAALFCLRGRTAKFNFPEN 80

Query: 83  PPEIAGASLLSRAEIQSVAAQFANSXXXXXXXXXXXXXXXXXXXXXXXXXVVSEATTAV- 142
           PPEI G   LS AEIQ+ AA+FANS                          VSE +  V 
Sbjct: 81  PPEITGGRSLSPAEIQTAAARFANSENPNSHPGRTVPEMQMESPSPSLSQSVSEGSVTVH 140

Query: 143 ----IEERSTFLDLSTAMGSGNYGSEFGLFPEYNPFFNELMNTTNSGAPFFDYGDENLD- 202
               +    +F+D+   +GSGNY +++GLFP ++    +         P  DYG+EN + 
Sbjct: 141 IDSEVTTDGSFMDMFANIGSGNYTADYGLFPGFDDLAGDFFMPP---LPTVDYGEENYNV 200

Query: 203 ----DQDSFLWNF 206
                Q+SFLWNF
Sbjct: 201 DGVIPQESFLWNF 210

[Close]
BLAST of Carg12941 vs. TrEMBL
Match: tr|W6FFV7|W6FFV7_9ROSA (Dehydration responsive element binding transcription factor OS=Morus notabilis OX=981085 GN=DREB5H PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.1e-43
Identity = 116/193 (60.10%), Postives = 135/193 (69.95%), Query Frame = 0 

Query: 23  RYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGRTARFNFPNN 82
           RYKGVR+RKWGKWVSEIRLPNSRERIWLGSYD+AEKAARAFDAALFCLRGRTA+FNFP N
Sbjct: 22  RYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTAEKAARAFDAALFCLRGRTAKFNFPEN 81

Query: 83  PPEIAGASLLSRAEIQSVAAQFANS-----XXXXXXXXXXXXXXXXXXXXXXXXXVVSEA 142
           PPEIAG   LS AEIQS AA+FANS               XXXXXXXXXXXXXXX V+  
Sbjct: 82  PPEIAGGRSLSPAEIQSAAARFANSEDPMKRSDRPVPELRXXXXXXXXXXXXXXXXVTVQ 141

Query: 143 TTAVIEERSTFLDLSTAMGSGNYGSEFGLFPEYNPFFNELMNTTNSGAPFFDYGDENLD- 202
             + +    +F+D+ T +G GNY S++GLFP ++    +         P  DYG+EN + 
Sbjct: 142 LDSELTTDGSFMDMFTNIGLGNYASDYGLFPGFDDLSGDFFMPP---PPTIDYGEENYNV 201

Query: 203 ----DQDSFLWNF 206
                Q+SFLWNF
Sbjct: 202 DAVFPQESFLWNF 211

The following BLAST results are available for this feature:
BLAST of Carg12941 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023516760.18.0e-8390.24ethylene-responsive transcription factor ERF017-like [Cucurbita pepo subsp. pepo... [more]
XP_022961075.11.4e-8291.22ethylene-responsive transcription factor ERF017 [Cucurbita moschata][more]
XP_022987452.14.4e-8198.91ethylene-responsive transcription factor ERF017-like [Cucurbita maxima][more]
XP_022147536.12.0e-6271.28ethylene-responsive transcription factor ERF017 [Momordica charantia][more]
XP_004144051.14.7e-5966.67PREDICTED: ethylene-responsive transcription factor ERF017 [Cucumis sativus] >KG... [more]
BLAST of Carg12941 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G19210.18.9e-4448.69Integrase-type DNA-binding superfamily protein[more]
AT1G74930.14.4e-3545.11Integrase-type DNA-binding superfamily protein[more]
AT5G21960.17.8e-3274.70Integrase-type DNA-binding superfamily protein[more]
AT4G31060.13.9e-2356.32Integrase-type DNA-binding superfamily protein[more]
AT1G77640.14.0e-2058.14Integrase-type DNA-binding superfamily protein[more]
BLAST of Carg12941 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q84QC2|ERF17_ARATH1.6e-4248.69Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q9S7L5|ERF18_ARATH8.0e-3445.11Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q9C591|ERF16_ARATH1.4e-3074.70Ethylene-responsive transcription factor ERF016 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q6NLD5|ERF15_ARATH7.0e-2256.32Ethylene-responsive transcription factor ERF015 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q9CAP4|ERF13_ARATH7.3e-1958.14Ethylene-responsive transcription factor ERF013 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Carg12941 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0M292|A0A0A0M292_CUCSA3.1e-5966.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G597730 PE=4 SV=1[more]
tr|A0A1S3BRH5|A0A1S3BRH5_CUCME1.6e-5564.62ethylene-responsive transcription factor ERF017-like OS=Cucumis melo OX=3656 GN=... [more]
tr|A0A2I4HQR5|A0A2I4HQR5_9ROSI3.7e-4454.12ethylene-responsive transcription factor ERF017-like OS=Juglans regia OX=51240 G... [more]
tr|A7XUL4|A7XUL4_BROPA1.1e-4351.81Putative dehydration-responsive element binding protein OS=Broussonetia papyrife... [more]
tr|W6FFV7|W6FFV7_9ROSA3.1e-4360.10Dehydration responsive element binding transcription factor OS=Morus notabilis O... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR036955AP2/ERF_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12941-RACarg12941-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 24..35
score: 63.33
coord: 46..62
score: 56.36
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 23..86
e-value: 5.3E-34
score: 129.0
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 22..72
e-value: 2.0E-11
score: 43.8
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 23..80
score: 22.524
IPR001471AP2/ERF domainCDDcd00018AP2coord: 23..82
e-value: 2.2935E-28
score: 101.579
IPR036955AP2/ERF domain superfamilyGENE3DG3DSA:3.30.730.10coord: 22..82
e-value: 2.7E-27
score: 96.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..133
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 8..159
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 22..81

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg12941Cla011139Watermelon (97103) v1carwmB0090
Carg12941Csa4G649620Cucumber (Chinese Long) v2carcuB0103
Carg12941Csa1G597730Cucumber (Chinese Long) v2carcuB0101
Carg12941MELO3C015543Melon (DHL92) v3.5.1carmeB0096
Carg12941MELO3C016927Melon (DHL92) v3.5.1carmeB0098
Carg12941ClCG03G014830Watermelon (Charleston Gray)carwcgB0094
Carg12941CSPI04G25870Wild cucumber (PI 183967)carcpiB0108
Carg12941CSPI01G28930Wild cucumber (PI 183967)carcpiB0106
Carg12941Cucsa.141980Cucumber (Gy14) v1carcgyB0112
Carg12941CmaCh01G016910Cucurbita maxima (Rimu)carcmaB0123
Carg12941CmaCh11G007540Cucurbita maxima (Rimu)carcmaB0120
Carg12941CmaCh10G007850Cucurbita maxima (Rimu)carcmaB0119
Carg12941CmoCh11G007650Cucurbita moschata (Rifu)carcmoB0129
Carg12941CmoCh10G008120Cucurbita moschata (Rifu)carcmoB0128
Carg12941CmoCh09G003800Cucurbita moschata (Rifu)carcmoB0127
Carg12941Lsi06G003590Bottle gourd (USVL1VR-Ls)carlsiB086
Carg12941Lsi04G013720Bottle gourd (USVL1VR-Ls)carlsiB085
Carg12941Cp4.1LG02g05660Cucurbita pepo (Zucchini)carcpeB0139
Carg12941Cp4.1LG18g02740Cucurbita pepo (Zucchini)carcpeB0138
Carg12941Cp4.1LG04g11170Cucurbita pepo (Zucchini)carcpeB0141
Carg12941CsGy1G028150Cucumber (Gy14) v2carcgybB0101
Carg12941CsGy4G024180Cucumber (Gy14) v2carcgybB0103
Carg12941MELO3C015543.2Melon (DHL92) v3.6.1carmedB0098
Carg12941MELO3C016927.2Melon (DHL92) v3.6.1carmedB0100
Carg12941CsaV3_4G036190Cucumber (Chinese Long) v3carcucB0111
Carg12941CsaV3_1G041310Cucumber (Chinese Long) v3carcucB0109
Carg12941Cla97C03G065080Watermelon (97103) v2carwmbB0094
Carg12941Bhi09G002518Wax gourdcarwgoB0108
Carg12941Bhi02G001487Wax gourdcarwgoB0110
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg12941Carg25205Silver-seed gourdcarcarB103
Carg12941Carg10731Silver-seed gourdcarcarB106
The following block(s) are covering this gene:
GeneOrganismBlock
Carg12941Silver-seed gourdcarcarB108
Carg12941Cucurbita maxima (Rimu)carcmaB0121
Carg12941Cucurbita moschata (Rifu)carcmoB0130
Carg12941Cucurbita pepo (Zucchini)carcpeB0143