Cp4.1LG04g09660 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g09660
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Aspartate racemase
Location	Cp4.1LG04 : 9958288 .. 9960813 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACCCTTCGTGGTAGTTTTGGCTCAGTATTATAACACATAGGGCTTCATTGCTACTGCAATGCTTCGCTAACGCTGGGCTAAATTTTGAATCTTTGTGTTGACGGTGGATGAAAATTCCAATTCCGTAGGGATTCAGTGCTATGCCCCCACTGAGTTTTGAAGGGGAAAAGGAGAGTGAGCCTATCCAGTCCTATGCCCCACTGACCAGACCTTCATTTTTGTCATCCTTCTCTTCAACGGTTGACAGCGCTTCACTGCTCAAAAGGTTGACAGCGTGACGGATTTACAATAATGTAAGATTCTTTCCAACTTCCTTTCCTTTTCACTATCAAATTCAATCACCGCACTTCCTGGAGCTTCTCTTCCTGTCTTACCTAGTTTTGCGCCATACACTATTTGCTTTGAATGTGAAGAAACCCAGAGCCGCTTCTTATTAACAACCTTTGTACTTCCATGGATTCTCGTGTAAATATCATGTCTTTCTTCATATTTTTATCCTGAGAGAATTTTGGGTTTTGGGGCATGGGTATAAATTTGATTCTCCAATCTATTTCTTTCCACCCTTTGAATTATCTATCTGTTCTGAGGTGAAATATGACTGCTTAGTTTGAATCCCACTGAAATTCTTGGTCTTTACATAAATGATGCTTGATGGAGGGATGGCTATGCCCTTTTATGCACTGAATTGCCCCGCACCTGTTCGACGAAATGCTAACGAAAGCATTACTCGCTTTAGAAGGAGATTAAACCCGTATTCATCTCTACAGATTTTCTCTGTTGTTCAAACGGATGAGAATGATAACTTACCAGTGTCCAAGAAGATATCAACTCCAGGGAAGTCTGTGTCAAAAGGTCGAGCTCCTAAGCCGCTTCTTGTCCAGCCAAATACCGTGGGTGTCATAGGAGGAGTATCGGTTATTTCTACTCTACTTTTCTTGGAAAAGCTCGTGTGGTGGAGCTTGAAGGATGGACAACAGAGTATACCATTTGTTGTCTGCAGCGATCCAGCATTAGGCAAAGGGATCCCACCTCTCACTTCATTGACTACATTCCCCGCAAATTCTTCTCAACATGCTCAGACTGATGCTCCCATCATCGAGATTTTGAAGCAAAAATGCGTGTTTCTCGAGCAATCTGGAGCTCGGTGCCTAATTACACCTTGCCATCTTTCACATAGGTGGCTTGGTGACACAAGTTGTAAATTACCTTTCCTTCATGTGGGAGATTGTGTTGCTATGGAGCTTAAAGAGGCTAAGCTTAAGCCACTTGAAGCAGGGAGCAGTGTCCGGATTGGGCTGCTTGCGACTGATGCAGCTATAGTGACTGGTTTTTACCGTGAGAGACTACAAAATCAGGTTTTGTAAATACATTCAGATCTATTTAGTAATTGATTCCAGAATTTGGTTCTGATTTCATTTTGTTTCTTCAGGGCTTTGAGGTTGTCTTGCCAGACGAAGCAACCATAAAGCATATTTTAGTTCCTGCAGTTGAAGCTTTGAACAAAAGGGATCAGGAAGGAGCAAGAAATCTGTTGAGGATTGCTGTTCATATTCTTTTGATAAGGGCTGTGAATATAGTAATACTTGCTTCTGATGAATTGCTTAATCTTCTTCCTCCAGATGATCCTATTCTGAAGAAATGTATTGACCCCATGGATGCGTTGGCCAGAGCAGCCATTAAATGGTCTAGATCTACAGGAAACTTACATGAGAAAGCTTAGCCTTTTCTCTCTTGTTCAGAAGCTGCATCATTTATGTATTCTTAGATAAGAAAATTGGAGCTATCAATGGCTCAAAACTAGAAGCTCTACTTTTTCCCTTTGGTAGAAACTAGTATGTGAAGAATATCCACCTGCTGCATTGTATTTTCAGACAATGAAACAAGAAGAATTACAAGGATTCTGCCTCAAAGAACTGCAATTTGTTTGCAAGGAACAATTGAATATGTGCTGTCAATGCCATTGCCCAGAGCTATGCAACTCGAACTAGCCTCACTAGCCTCAAAAGCCAAAATGCTACATCAAACTCAGCCTGGAAGGTTGATTCATATGAGTTTCAGCTTCATTTTCCATTGTCTTGATAAGCCCAAGAGGAGATAAGTTGATGAGCGATTGCATAAGGGCCAGGAAAGAACATGGAAGCAAGTCCACTATCTTCAGCGTTGATATCAGCAGACTGACTGTGTCTGCTTTCGACTCCGTTGCACAGTTGTTCGACTTTGGCTGCTGCAGATCTTTGCGTCTTCTCGTAGTCGCTTAATGTTAAAGCTTTCTTCACATCTTCTCTGGTGTGCCATTGGGCGTCTGTACACAAAGTTTCAACCAATTCAGATCCATTCAAAGTGAACGAGAATTTCAAGAGGAGTTGTCTTAGAAAGAAAACTAGAAGTGGCGACATTGTAATGCAAATAATGTGAACATTAGTCAATATACCTTCTAACTCAGCCTTGTCCACCTTGATATCGAGCGATTTTGCATACGCAAAGAACCCAACCATCAATTGACATGGCATTGTGCTTCGTCCAAC

mRNA sequence

TACCCTTCGTGGTAGTTTTGGCTCAGTATTATAACACATAGGGCTTCATTGCTACTGCAATGCTTCGCTAACGCTGGGCTAAATTTTGAATCTTTGTGTTGACGGTGGATGAAAATTCCAATTCCGTAGGGATTCAGTGCTATGCCCCCACTGAGTTTTGAAGGGGAAAAGGAGAGTGAGCCTATCCAGTCCTATGCCCCACTGACCAGACCTTCATTTTTGTCATCCTTCTCTTCAACGGTTGACAGCGCTTCACTGCTCAAAAGGTTGACAGCGTGACGGATTTACAATAATGTAAGATTCTTTCCAACTTCCTTTCCTTTTCACTATCAAATTCAATCACCGCACTTCCTGGAGCTTCTCTTCCTGTCTTACCTAGTTTTGCGCCATACACTATTTGCTTTGAATGTGAAGAAACCCAGAGCCGCTTCTTATTAACAACCTTTGTACTTCCATGGATTCTCGTGTAAATATCATGTCTTTCTTCATATTTTTATCCTGAGAGAATTTTGGGTTTTGGGGCATGGGTATAAATTTGATTCTCCAATCTATTTCTTTCCACCCTTTGAATTATCTATCTGTTCTGAGGTGAAATATGACTGCTTAGTTTGAATCCCACTGAAATTCTTGGTCTTTACATAAATGATGCTTGATGGAGGGATGGCTATGCCCTTTTATGCACTGAATTGCCCCGCACCTGTTCGACGAAATGCTAACGAAAGCATTACTCGCTTTAGAAGGAGATTAAACCCGTATTCATCTCTACAGATTTTCTCTGTTGTTCAAACGGATGAGAATGATAACTTACCAGTGTCCAAGAAGATATCAACTCCAGGGAAGTCTGTGTCAAAAGGTCGAGCTCCTAAGCCGCTTCTTGTCCAGCCAAATACCGTGGGTGTCATAGGAGGAGTATCGGTTATTTCTACTCTACTTTTCTTGGAAAAGCTCGTGTGGTGGAGCTTGAAGGATGGACAACAGAGTATACCATTTGTTGTCTGCAGCGATCCAGCATTAGGCAAAGGGATCCCACCTCTCACTTCATTGACTACATTCCCCGCAAATTCTTCTCAACATGCTCAGACTGATGCTCCCATCATCGAGATTTTGAAGCAAAAATGCGTGTTTCTCGAGCAATCTGGAGCTCGGTGCCTAATTACACCTTGCCATCTTTCACATAGGTGGCTTGGTGACACAAGTTGTAAATTACCTTTCCTTCATGTGGGAGATTGTGTTGCTATGGAGCTTAAAGAGGCTAAGCTTAAGCCACTTGAAGCAGGGAGCAGTGTCCGGATTGGGCTGCTTGCGACTGATGCAGCTATAGTGACTGGTTTTTACCGTGAGAGACTACAAAATCAGGGCTTTGAGGTTGTCTTGCCAGACGAAGCAACCATAAAGCATATTTTAGTTCCTGCAGTTGAAGCTTTGAACAAAAGGGATCAGGAAGGAGCAAGAAATCTGTTGAGGATTGCTGTTCATATTCTTTTGATAAGGGCTGTGAATATAGTAATACTTGCTTCTGATGAATTGCTTAATCTTCTTCCTCCAGATGATCCTATTCTGAAGAAATGTATTGACCCCATGGATGCGTTGGCCAGAGCAGCCATTAAATGGTCTAGATCTACAGGAAACTTACATGAGAAAGCTTAGCCTTTTCTCTCTTGTTCAGAAGCTGCATCATTTATGTATTCTTAGATAAGAAAATTGGAGCTATCAATGGCTCAAAACTAGAAGCTCTACTTTTTCCCTTTGGTAGAAACTAGTATGTGAAGAATATCCACCTGCTGCATTGTATTTTCAGACAATGAAACAAGAAGAATTACAAGGATTCTGCCTCAAAGAACTGCAATTTGTTTGCAAGGAACAATTGAATATGTGCTGTCAATGCCATTGCCCAGAGCTATGCAACTCGAACTAGCCTCACTAGCCTCAAAAGCCAAAATGCTACATCAAACTCAGCCTGGAAGGTTGATTCATATGAGTTTCAGCTTCATTTTCCATTGTCTTGATAAGCCCAAGAGGAGATAAGTTGATGAGCGATTGCATAAGGGCCAGGAAAGAACATGGAAGCAAGTCCACTATCTTCAGCGTTGATATCAGCAGACTGACTGTGTCTGCTTTCGACTCCGTTGCACAGTTGTTCGACTTTGGCTGCTGCAGATCTTTGCGTCTTCTCGTAGTCGCTTAATGTTAAAGCTTTCTTCACATCTTCTCTGGTGTGCCATTGGGCGTCTGTACACAAAGTTTCAACCAATTCAGATCCATTCAAAGTGAACGAGAATTTCAAGAGGAGTTGTCTTAGAAAGAAAACTAGAAGTGGCGACATTGTAATGCAAATAATGTGAACATTAGTCAATATACCTTCTAACTCAGCCTTGTCCACCTTGATATCGAGCGATTTTGCATACGCAAAGAACCCAACCATCAATTGACATGGCATTGTGCTTCGTCCAAC

Coding sequence (CDS)

ATGATGCTTGATGGAGGGATGGCTATGCCCTTTTATGCACTGAATTGCCCCGCACCTGTTCGACGAAATGCTAACGAAAGCATTACTCGCTTTAGAAGGAGATTAAACCCGTATTCATCTCTACAGATTTTCTCTGTTGTTCAAACGGATGAGAATGATAACTTACCAGTGTCCAAGAAGATATCAACTCCAGGGAAGTCTGTGTCAAAAGGTCGAGCTCCTAAGCCGCTTCTTGTCCAGCCAAATACCGTGGGTGTCATAGGAGGAGTATCGGTTATTTCTACTCTACTTTTCTTGGAAAAGCTCGTGTGGTGGAGCTTGAAGGATGGACAACAGAGTATACCATTTGTTGTCTGCAGCGATCCAGCATTAGGCAAAGGGATCCCACCTCTCACTTCATTGACTACATTCCCCGCAAATTCTTCTCAACATGCTCAGACTGATGCTCCCATCATCGAGATTTTGAAGCAAAAATGCGTGTTTCTCGAGCAATCTGGAGCTCGGTGCCTAATTACACCTTGCCATCTTTCACATAGGTGGCTTGGTGACACAAGTTGTAAATTACCTTTCCTTCATGTGGGAGATTGTGTTGCTATGGAGCTTAAAGAGGCTAAGCTTAAGCCACTTGAAGCAGGGAGCAGTGTCCGGATTGGGCTGCTTGCGACTGATGCAGCTATAGTGACTGGTTTTTACCGTGAGAGACTACAAAATCAGGGCTTTGAGGTTGTCTTGCCAGACGAAGCAACCATAAAGCATATTTTAGTTCCTGCAGTTGAAGCTTTGAACAAAAGGGATCAGGAAGGAGCAAGAAATCTGTTGAGGATTGCTGTTCATATTCTTTTGATAAGGGCTGTGAATATAGTAATACTTGCTTCTGATGAATTGCTTAATCTTCTTCCTCCAGATGATCCTATTCTGAAGAAATGTATTGACCCCATGGATGCGTTGGCCAGAGCAGCCATTAAATGGTCTAGATCTACAGGAAACTTACATGAGAAAGCTTAG

Protein sequence

MMLDGGMAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKKISTPGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSDPALGKGIPPLTSLTTFPANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWLGDTSCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQGFEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNLLPPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA

Homology

[Close]

BLAST of Cp4.1LG04g09660 vs. Swiss-Prot
Match: RACD_PYRHO (Aspartate racemase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=PH0670 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.1e-12
Identity = 62/242 (25.62%), Postives = 108/242 (44.63%), Query Frame = 1


Query: 83  TVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSDPALGKGIPPLTSLTTFPANSS 142
           T+G++GG+  ++T     ++V  +     Q  P V+  +       P +   T +     
Sbjct: 3   TIGILGGMGPLATAELFRRIVIKTPAKRDQEHPKVIIFNN------PQIPDRTAYILGKG 62

Query: 143 QHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWLGDT--SCKLPFLHVGDCVAME 202
           +  +    +I   K+    LE+ GA  +I PC+ +H ++ D   + K+P + + +  A +
Sbjct: 63  EDPRPQ--LIWTAKR----LEECGADFIIMPCNTAHAFVEDIRKAIKIPIISMIEETAKK 122

Query: 203 LKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQGFEVVLPDEATIKHILVPAVEA 262
           +KE   K        + GLLAT   IV+G Y +     G E++ P E   K ++    E 
Sbjct: 123 VKELGFK--------KAGLLATTGTIVSGVYEKEFSKYGVEIMTPTEDEQKDVMRGIYEG 182

Query: 263 LNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNLLPPDDPILKKCIDPMDALARAA 322
           +   + +  R LL     IL  R    +I    E+  +L  DD +    IDPMD +A  A
Sbjct: 183 VKAGNLKLGRELLLKTAKILEERGAECIIAGCTEVSVVLKQDD-LKVPLIDPMDVIAEVA 223

[Close]

BLAST of Cp4.1LG04g09660 vs. TrEMBL
Match: A0A061GM80_THECC (Amino-acid racemase isoform 2 OS=Theobroma cacao GN=TCM_038032 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 2.2e-104
Identity = 196/336 (58.33%), Postives = 257/336 (76.49%), Query Frame = 1


Query: 2   MLDGGMAMPFYA-LNCPAPVRRNANESITRFRRRLNPYSSLQIFS-VVQTDENDNLPVSK 61
           M DGGM M F   +NCP PV  N +++ ++ R R  P  ++Q++S ++QTDE+ NLP SK
Sbjct: 1   MFDGGMTMTFNTTVNCP-PVLGNLSKNRSQCRTRPTPSIAVQMYSSLLQTDESGNLPESK 60

Query: 62  KISTPGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVC 121
           K+S    ++ K +A   LL Q NTVG+IGGVSV+STL+FLEKLV WS ++G++ +PFVVC
Sbjct: 61  KLSGSCSAIFKCQAQNSLLSQANTVGIIGGVSVLSTLIFLEKLVCWSSRNGEECVPFVVC 120

Query: 122 SDPALGKGIPPLTSLTTFPANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHR 181
           SDPAL +G+    S+ +     +Q      PI+E L+ K VFLEQSGARC++TPCH+SH 
Sbjct: 121 SDPALDEGLISQGSIHSSSGEIAQKEGNHEPIVENLRNKRVFLEQSGARCIVTPCHISHA 180

Query: 182 WLGDTS--CKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQN 241
           W  + S  C LPF HVG+CVA ELKEAKLKPL+AGS+VRIG+LAT   I  GFY+E+LQ 
Sbjct: 181 WHDEISEGCSLPFFHVGECVARELKEAKLKPLDAGSTVRIGVLATYETIGAGFYQEKLQK 240

Query: 242 QGFEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLN 301
           QGFEVVLPD+ T++HIL+PA+E+LN+RD EGARNLLR+A+ +LLI AVN+VILASDEL N
Sbjct: 241 QGFEVVLPDKGTMEHILIPAIESLNRRDMEGARNLLRVAIQVLLISAVNVVILASDELQN 300

Query: 302 LLPPDDPILKKCIDPMDALARAAIKWSRSTGNLHEK 334
           LLP +DP++KKCIDPMDALAR+ IKW++S   +H+K
Sbjct: 301 LLPREDPLVKKCIDPMDALARSTIKWAKSAKKVHKK 335

[Close]

BLAST of Cp4.1LG04g09660 vs. TrEMBL
Match: A0A0B0NHX0_GOSAR (Putative amino-acid racemase OS=Gossypium arboreum GN=F383_01324 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 2.7e-99
Identity = 190/335 (56.72%), Postives = 248/335 (74.03%), Query Frame = 1


Query: 2   MLDGGMAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFS-VVQTDENDNLPVSKK 61
           M DGG+ M F+ +NCP PV  N ++  ++FR R NP  ++Q+ S +VQTDEN +   SKK
Sbjct: 1   MFDGGLTMSFHKVNCP-PVVGNLSKIRSQFRTRPNPCFAVQMSSTLVQTDENGDFYESKK 60

Query: 62  ISTPGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCS 121
           IS    +  K +    LL Q NTVG+IGGVSV+STL+FLEKLVWWS ++G++ +PFVVCS
Sbjct: 61  ISGSSSTELKSQPQNSLLSQANTVGIIGGVSVLSTLIFLEKLVWWSSRNGEECVPFVVCS 120

Query: 122 DPALGKGIPPLTSLTTFPANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRW 181
           +PAL  G  P+          S     +  II+ L+QK +FLE+SGARC++ PCH+S+ W
Sbjct: 121 EPALDGGRRPV---------HSSEVNGEHIIIQNLRQKRIFLEKSGARCIVMPCHISNAW 180

Query: 182 LGD--TSCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQ 241
             +   SC LPF H+GDCVA ELKEAKLKP++AGSSVRIG+L+T   I    Y+++LQNQ
Sbjct: 181 HDEISESCLLPFFHIGDCVARELKEAKLKPMDAGSSVRIGVLSTCETIAVAPYQQKLQNQ 240

Query: 242 GFEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNL 301
           GFEVVLPD+ T++HIL+PAVE+ N+RD EGARNLLRIA+ +LLIRAVN+VILASDEL N+
Sbjct: 241 GFEVVLPDKETMEHILMPAVESWNQRDIEGARNLLRIAIQVLLIRAVNVVILASDELQNI 300

Query: 302 LPPDDPILKKCIDPMDALARAAIKWSRSTGNLHEK 334
           LP +DP+LKKC+DPMDALAR  IKW++S   +H K
Sbjct: 301 LPREDPLLKKCMDPMDALARTTIKWAKSAKKVHRK 325

[Close]

BLAST of Cp4.1LG04g09660 vs. TrEMBL
Match: A5BHI0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011681 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 3.0e-98
Identity = 188/324 (58.02%), Postives = 242/324 (74.69%), Query Frame = 1


Query: 14  LNCPAPVRRNANESITRFRRRLNPYSSLQIFSV-VQTDENDNLPVSKKISTPGKSVSKGR 73
           LN PA + R      T    R NP +++Q+ SV +QTDE+ N P SKKI  P  +V++ +
Sbjct: 7   LNFPAFLNR------TWCSGRSNPSAAVQLSSVFIQTDESGNTPESKKILGPVAAVARCQ 66

Query: 74  APKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSDPALGKGIPPLT 133
           AP  LL Q NTVG++GGVSV STL+FLEKLVWWS + G++S+PFVVCSDP L + +   +
Sbjct: 67  APNSLLTQANTVGILGGVSVFSTLIFLEKLVWWSSRHGEESLPFVVCSDPTLNRELASPS 126

Query: 134 SLTTFPANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWLGDTS--CKLPF 193
               F   ++Q      PI+E L+ K  FLEQSGARC++ PCHL+H W  + S  C LPF
Sbjct: 127 LSPFFRGKNAQFQLDHGPIVENLRCKRAFLEQSGARCIVMPCHLAHAWHSEVSKGCPLPF 186

Query: 194 LHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQGFEVVLPDEATI 253
           LHVG+CVA ELK+AK KPLEAGS+VRIG+LA    ++ GFY+E+LQ+QGFEVVLPD AT+
Sbjct: 187 LHVGECVASELKKAKFKPLEAGSNVRIGVLAPGETLMAGFYQEKLQSQGFEVVLPDMATM 246

Query: 254 KHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNLLPPDDPILKKCI 313
           +HI+VPA+EAL+++D EGARNLLRIAVHI L+RAVNIVILASDE+ +LLP DDP+ KKCI
Sbjct: 247 EHIVVPAIEALHRKDMEGARNLLRIAVHIFLMRAVNIVILASDEMQDLLPRDDPLSKKCI 306

Query: 314 DPMDALARAAIKWSRSTGNLHEKA 335
           +PMDALAR+ I W++S   +H KA
Sbjct: 307 NPMDALARSTIGWAKSIEEVHRKA 324

[Close]

BLAST of Cp4.1LG04g09660 vs. TrEMBL
Match: A0A061GV22_THECC (Amino-acid racemase isoform 1 OS=Theobroma cacao GN=TCM_038032 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.5e-97
Identity = 188/329 (57.14%), Postives = 247/329 (75.08%), Query Frame = 1


Query: 2   MLDGGMAMPFYA-LNCPAPVRRNANESITRFRRRLNPYSSLQIFS-VVQTDENDNLPVSK 61
           M DGGM M F   +NCP PV  N +++ ++ R R  P  ++Q++S ++QTDE+ NLP SK
Sbjct: 40  MFDGGMTMTFNTTVNCP-PVLGNLSKNRSQCRTRPTPSIAVQMYSSLLQTDESGNLPESK 99

Query: 62  KISTPGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVC 121
           K+S    ++ K +A   LL Q NTVG+IGGVSV+STL+FLEKLV WS ++G++ +PFVVC
Sbjct: 100 KLSGSCSAIFKCQAQNSLLSQANTVGIIGGVSVLSTLIFLEKLVCWSSRNGEECVPFVVC 159

Query: 122 SDPALGKGIPPLTSLTTFPANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHR 181
           SDPAL +G+    S+ +     +Q      PI+E L+ K VFLEQSGARC++TPCH+SH 
Sbjct: 160 SDPALDEGLISQGSIHSSSGEIAQKEGNHEPIVENLRNKRVFLEQSGARCIVTPCHISHA 219

Query: 182 WLGDTS--CKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQN 241
           W  + S  C LPF HVG+CVA ELKEAKLKPL+AGS+VRIG+LAT   I  GFY+E+LQ 
Sbjct: 220 WHDEISEGCSLPFFHVGECVARELKEAKLKPLDAGSTVRIGVLATYETIGAGFYQEKLQK 279

Query: 242 QGFEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLN 301
           Q      PD+ T++HIL+PA+E+LN+RD EGARNLLR+A+ +LLI AVN+VILASDEL N
Sbjct: 280 Q------PDKGTMEHILIPAIESLNRRDMEGARNLLRVAIQVLLISAVNVVILASDELQN 339

Query: 302 LLPPDDPILKKCIDPMDALARAAIKWSRS 327
           LLP +DP++KKCIDPMDALAR+ IKW++S
Sbjct: 340 LLPREDPLVKKCIDPMDALARSTIKWAKS 361

[Close]

BLAST of Cp4.1LG04g09660 vs. TrEMBL
Match: A0A0D2THP7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G019200 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 7.4e-97
Identity = 188/335 (56.12%), Postives = 244/335 (72.84%), Query Frame = 1


Query: 2   MLDGGMAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFS-VVQTDENDNLPVSKK 61
           M DGG+ M F+ +NCP PV  N ++  ++ R R NP  ++Q+ S +VQTDEN +   SKK
Sbjct: 1   MFDGGLTMSFHKVNCP-PVVGNLSKIRSQCRTRPNPCFAVQMSSTLVQTDENGDFYESKK 60

Query: 62  ISTPGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCS 121
           IS    +  K +    LL Q NTVG+IGGVSV+STL+FLEKLVWWS ++G++ +PFVVCS
Sbjct: 61  ISGSSSTELKSQPQNSLLSQANTVGIIGGVSVLSTLIFLEKLVWWSSRNGEECVPFVVCS 120

Query: 122 DPALGKGIPPLTSLTTFPANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRW 181
           +PAL  G  P+          S     +  II+ L+QK +FLE+SGARC++ PCH+S+ W
Sbjct: 121 EPALDGGRRPV---------HSSEVNDEHIIIQNLRQKRIFLEKSGARCIVMPCHISNAW 180

Query: 182 LGDTS--CKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQ 241
             + S  C LPF H+GDCVA ELKEAKLKPL+AGSSVRIG+L+T   I    Y+++LQNQ
Sbjct: 181 HDEISESCSLPFFHIGDCVARELKEAKLKPLDAGSSVRIGVLSTCETIAVAPYQQKLQNQ 240

Query: 242 GFEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNL 301
           GFEVVLPD+ T++HIL+PA E+ N+RD EGARNLLRIA+ +LLIRAVNIVILASD L N+
Sbjct: 241 GFEVVLPDKETMEHILMPAAESWNQRDIEGARNLLRIAIQVLLIRAVNIVILASDVLQNI 300

Query: 302 LPPDDPILKKCIDPMDALARAAIKWSRSTGNLHEK 334
           LP +DP+LKKC+DPMDALAR  IKW++S   +  K
Sbjct: 301 LPREDPLLKKCMDPMDALARTTIKWAKSAKKVRRK 325

[Close]

BLAST of Cp4.1LG04g09660 vs. TAIR10
Match: AT1G15410.1 (AT1G15410.1 aspartate-glutamate racemase family)

HSP 1 Score: 285.8 bits (730), Expect = 3.4e-77
Identity = 143/291 (49.14%), Postives = 209/291 (71.82%), Query Frame = 1


Query: 46  VVQTDENDNLPVSKK---ISTPGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKL 105
           ++  DE+++LP  KK   +S   ++         LL Q NTVG+IGGVS  STL F++KL
Sbjct: 40  LLHMDESNDLPKPKKGFCLSEDSRNSLNSLPADSLLRQANTVGIIGGVSTDSTLKFVKKL 99

Query: 106 VWWSLKDGQQSIPFVVCSDPALGKGIPPLTSLTTFPANSSQHAQTDAP-----IIEILKQ 165
           V WS  DG+ S+PFV+CSDPAL K +  L    ++P  S  H +   P     I+E L+ 
Sbjct: 100 VDWSSNDGKSSLPFVLCSDPALNKELL-LYEENSYP--SLYHREESTPVDPKLIVENLRN 159

Query: 166 KCVFLEQSGARCLITPCHLSHRWLGDT--SCKLPFLHVGDCVAMELKEAKLKPLEAGSSV 225
           K  +LE+ GA+ ++ PCH++H W  +      +P LH+G+C+A EL+EAK+KPLEAG+ +
Sbjct: 160 KRRYLERCGAKLILMPCHIAHIWYEEVCEGSLVPLLHMGECIAKELQEAKMKPLEAGNPL 219

Query: 226 RIGLLATDAAIVTGFYRERLQNQGFEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRI 285
           R+G++AT A +  GFY+E+LQ+ GFE VLPD+AT++H ++P++EA+ ++D EGARNLLRI
Sbjct: 220 RVGVMATSATLSAGFYQEKLQSNGFEAVLPDKATMEHTVIPSIEAMKRKDMEGARNLLRI 279

Query: 286 AVHILLIRAVNIVILASDELLNLLPPDDPILKKCIDPMDALARAAIKWSRS 327
           A+ +LL++AVN+V+L SDE+ +LLP DDP+LKKC+DPMDALAR+AIKW+ +
Sbjct: 280 ALQVLLVQAVNVVMLGSDEMRDLLPGDDPLLKKCVDPMDALARSAIKWAEN 327

[Close]

BLAST of Cp4.1LG04g09660 vs. NCBI nr
Match: gi|659130146|ref|XP_008465022.1| (PREDICTED: uncharacterized protein LOC103502741 isoform X1 [Cucumis melo])

HSP 1 Score: 540.4 bits (1391), Expect = 2.2e-150
Identity = 276/332 (83.13%), Postives = 296/332 (89.16%), Query Frame = 1


Query: 1   MMLDGGMAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKK 60
           MML GGMAM FYA  CPAPVRRNANE ITRFRRR+N YSS+QI SVVQTD NDNLP SKK
Sbjct: 1   MMLHGGMAMHFYAPICPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKK 60

Query: 61  ISTPGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCS 120
           IS+ GKS+SK R PKPLLVQPNTVGVIGGVSV STLLFLEKLVWWSLKDGQ+SIPFVVCS
Sbjct: 61  ISSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS 120

Query: 121 DPALGKGIPPLTSLTTFPANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRW 180
           +PALGKGIPP+TSL TF  +SSQ+  +DAPIIE L +K  FLE SGARCLITPCHL+HRW
Sbjct: 121 EPALGKGIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRW 180

Query: 181 LGDT--SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQ 240
           L DT  SCKLPFLHVGDCVA ELKEA LKPLE G +VRIGLLATD   VTG Y ERLQNQ
Sbjct: 181 LSDTSESCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATDTT-VTGIYYERLQNQ 240

Query: 241 GFEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNL 300
           GF+V+LPDEAT+KHI++PAVEALNKRDQEGARNLLRIAVH+LLIRAVN+VILASDELLNL
Sbjct: 241 GFDVLLPDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNL 300

Query: 301 LPPDDPILKKCIDPMDALARAAIKWSRSTGNL 331
           LPPDDPILKKCIDPMDALARAAIKWSRST NL
Sbjct: 301 LPPDDPILKKCIDPMDALARAAIKWSRSTENL 331

[Close]

BLAST of Cp4.1LG04g09660 vs. NCBI nr
Match: gi|659130148|ref|XP_008465023.1| (PREDICTED: uncharacterized protein LOC103502741 isoform X2 [Cucumis melo])

HSP 1 Score: 459.1 bits (1180), Expect = 6.4e-126
Identity = 234/289 (80.97%), Postives = 254/289 (87.89%), Query Frame = 1


Query: 1   MMLDGGMAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKK 60
           MML GGMAM FYA  CPAPVRRNANE ITRFRRR+N YSS+QI SVVQTD NDNLP SKK
Sbjct: 1   MMLHGGMAMHFYAPICPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKK 60

Query: 61  ISTPGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCS 120
           IS+ GKS+SK R PKPLLVQPNTVGVIGGVSV STLLFLEKLVWWSLKDGQ+SIPFVVCS
Sbjct: 61  ISSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS 120

Query: 121 DPALGKGIPPLTSLTTFPANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRW 180
           +PALGKGIPP+TSL TF  +SSQ+  +DAPIIE L +K  FLE SGARCLITPCHL+HRW
Sbjct: 121 EPALGKGIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRW 180

Query: 181 LGDT--SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQ 240
           L DT  SCKLPFLHVGDCVA ELKEA LKPLE G +VRIGLLATD   VTG Y ERLQNQ
Sbjct: 181 LSDTSESCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATDTT-VTGIYYERLQNQ 240

Query: 241 GFEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNI 288
           GF+V+LPDEAT+KHI++PAVEALNKRDQEGARNLLRIAVH+LLIRAVN+
Sbjct: 241 GFDVLLPDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNM 288

[Close]

BLAST of Cp4.1LG04g09660 vs. NCBI nr
Match: gi|590577952|ref|XP_007013376.1| (Amino-acid racemase isoform 2 [Theobroma cacao])

HSP 1 Score: 387.1 bits (993), Expect = 3.1e-104
Identity = 196/336 (58.33%), Postives = 257/336 (76.49%), Query Frame = 1


Query: 2   MLDGGMAMPFYA-LNCPAPVRRNANESITRFRRRLNPYSSLQIFS-VVQTDENDNLPVSK 61
           M DGGM M F   +NCP PV  N +++ ++ R R  P  ++Q++S ++QTDE+ NLP SK
Sbjct: 1   MFDGGMTMTFNTTVNCP-PVLGNLSKNRSQCRTRPTPSIAVQMYSSLLQTDESGNLPESK 60

Query: 62  KISTPGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVC 121
           K+S    ++ K +A   LL Q NTVG+IGGVSV+STL+FLEKLV WS ++G++ +PFVVC
Sbjct: 61  KLSGSCSAIFKCQAQNSLLSQANTVGIIGGVSVLSTLIFLEKLVCWSSRNGEECVPFVVC 120

Query: 122 SDPALGKGIPPLTSLTTFPANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHR 181
           SDPAL +G+    S+ +     +Q      PI+E L+ K VFLEQSGARC++TPCH+SH 
Sbjct: 121 SDPALDEGLISQGSIHSSSGEIAQKEGNHEPIVENLRNKRVFLEQSGARCIVTPCHISHA 180

Query: 182 WLGDTS--CKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQN 241
           W  + S  C LPF HVG+CVA ELKEAKLKPL+AGS+VRIG+LAT   I  GFY+E+LQ 
Sbjct: 181 WHDEISEGCSLPFFHVGECVARELKEAKLKPLDAGSTVRIGVLATYETIGAGFYQEKLQK 240

Query: 242 QGFEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLN 301
           QGFEVVLPD+ T++HIL+PA+E+LN+RD EGARNLLR+A+ +LLI AVN+VILASDEL N
Sbjct: 241 QGFEVVLPDKGTMEHILIPAIESLNRRDMEGARNLLRVAIQVLLISAVNVVILASDELQN 300

Query: 302 LLPPDDPILKKCIDPMDALARAAIKWSRSTGNLHEK 334
           LLP +DP++KKCIDPMDALAR+ IKW++S   +H+K
Sbjct: 301 LLPREDPLVKKCIDPMDALARSTIKWAKSAKKVHKK 335

[Close]

BLAST of Cp4.1LG04g09660 vs. NCBI nr
Match: gi|645275282|ref|XP_008242737.1| (PREDICTED: uncharacterized protein LOC103341035 [Prunus mume])

HSP 1 Score: 372.9 bits (956), Expect = 6.0e-100
Identity = 192/333 (57.66%), Postives = 251/333 (75.38%), Query Frame = 1


Query: 2   MLDGGMAMPFYALNCPAPVRRNANESITRFRRRLNP-YSSLQIFSVVQTDENDNLPVSKK 61
           M+D GM M F+  N P  +   A ++ +  R + +P  S++Q+ SV+QT+E+ NLP SK+
Sbjct: 1   MVDAGMTMSFHTQNRPPLLLGVATKNRSHSRTKSSPSVSAVQVSSVLQTNESGNLPESKR 60

Query: 62  ISTPGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCS 121
            S P   +++ +AP  +L QPNTVG+IGGVSV S+LLFLEKLVWWSLKDG +  PFVVCS
Sbjct: 61  SSMP---LTRFQAPNYILSQPNTVGIIGGVSVFSSLLFLEKLVWWSLKDGGECPPFVVCS 120

Query: 122 DPALGKGIPPLTSLTTFPAN--SSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSH 181
           DP L K +P  +   +F  +  S+Q    + PIIE L +K  FLE SGARC++ PCHLSH
Sbjct: 121 DPTLYKELPIRSLFHSFTRSRASAQILTNNWPIIESLCRKRAFLEHSGARCIVMPCHLSH 180

Query: 182 RWLGDTS--CKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQ 241
            W    S  C L FLHVG+CVA EL+EAKLKPLE GS+VRIG+LA DA ++ GFY+E+LQ
Sbjct: 181 AWHDQISKDCSLLFLHVGECVARELREAKLKPLENGSNVRIGVLAADATLMAGFYQEKLQ 240

Query: 242 NQGFEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELL 301
           +QGFEVV+PD+ T++H+++PA+EA+ +RD EGARNLLRIAV +LL+RAVN VI+ASDEL 
Sbjct: 241 SQGFEVVVPDKETMEHVVIPAIEAIKRRDMEGARNLLRIAVQVLLVRAVNTVIIASDELQ 300

Query: 302 NLLPPDDPILKKCIDPMDALARAAIKWSRSTGN 330
            +LP DDP+LKKCIDPMDALAR+ IKW+ +TGN
Sbjct: 301 GVLPRDDPLLKKCIDPMDALARSTIKWANATGN 330

[Close]

BLAST of Cp4.1LG04g09660 vs. NCBI nr
Match: gi|728832992|gb|KHG12435.1| (putative amino-acid racemase [Gossypium arboreum])

HSP 1 Score: 370.2 bits (949), Expect = 3.9e-99
Identity = 190/335 (56.72%), Postives = 248/335 (74.03%), Query Frame = 1


Query: 2   MLDGGMAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFS-VVQTDENDNLPVSKK 61
           M DGG+ M F+ +NCP PV  N ++  ++FR R NP  ++Q+ S +VQTDEN +   SKK
Sbjct: 1   MFDGGLTMSFHKVNCP-PVVGNLSKIRSQFRTRPNPCFAVQMSSTLVQTDENGDFYESKK 60

Query: 62  ISTPGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCS 121
           IS    +  K +    LL Q NTVG+IGGVSV+STL+FLEKLVWWS ++G++ +PFVVCS
Sbjct: 61  ISGSSSTELKSQPQNSLLSQANTVGIIGGVSVLSTLIFLEKLVWWSSRNGEECVPFVVCS 120

Query: 122 DPALGKGIPPLTSLTTFPANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRW 181
           +PAL  G  P+          S     +  II+ L+QK +FLE+SGARC++ PCH+S+ W
Sbjct: 121 EPALDGGRRPV---------HSSEVNGEHIIIQNLRQKRIFLEKSGARCIVMPCHISNAW 180

Query: 182 LGD--TSCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQ 241
             +   SC LPF H+GDCVA ELKEAKLKP++AGSSVRIG+L+T   I    Y+++LQNQ
Sbjct: 181 HDEISESCLLPFFHIGDCVARELKEAKLKPMDAGSSVRIGVLSTCETIAVAPYQQKLQNQ 240

Query: 242 GFEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNL 301
           GFEVVLPD+ T++HIL+PAVE+ N+RD EGARNLLRIA+ +LLIRAVN+VILASDEL N+
Sbjct: 241 GFEVVLPDKETMEHILMPAVESWNQRDIEGARNLLRIAIQVLLIRAVNVVILASDELQNI 300

Query: 302 LPPDDPILKKCIDPMDALARAAIKWSRSTGNLHEK 334
           LP +DP+LKKC+DPMDALAR  IKW++S   +H K
Sbjct: 301 LPREDPLLKKCMDPMDALARTTIKWAKSAKKVHRK 325

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g09660 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RACD_PYRHO	2.1e-12	25.62	Aspartate racemase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JC...	[more]

BLAST of Cp4.1LG04g09660 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061GM80_THECC	2.2e-104	58.33	Amino-acid racemase isoform 2 OS=Theobroma cacao GN=TCM_038032 PE=4 SV=1	[more]
A0A0B0NHX0_GOSAR	2.7e-99	56.72	Putative amino-acid racemase OS=Gossypium arboreum GN=F383_01324 PE=4 SV=1	[more]
A5BHI0_VITVI	3.0e-98	58.02	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011681 PE=4 SV=1	[more]
A0A061GV22_THECC	1.5e-97	57.14	Amino-acid racemase isoform 1 OS=Theobroma cacao GN=TCM_038032 PE=4 SV=1	[more]
A0A0D2THP7_GOSRA	7.4e-97	56.12	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G019200 PE=4 SV=1	[more]

BLAST of Cp4.1LG04g09660 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G15410.1	3.4e-77	49.14	aspartate-glutamate racemase family	[more]

BLAST of Cp4.1LG04g09660 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659130146\|ref\|XP_008465022.1\|	2.2e-150	83.13	PREDICTED: uncharacterized protein LOC103502741 isoform X1 [Cucumis melo]	[more]
gi\|659130148\|ref\|XP_008465023.1\|	6.4e-126	80.97	PREDICTED: uncharacterized protein LOC103502741 isoform X2 [Cucumis melo]	[more]
gi\|590577952\|ref\|XP_007013376.1\|	3.1e-104	58.33	Amino-acid racemase isoform 2 [Theobroma cacao]	[more]
gi\|645275282\|ref\|XP_008242737.1\|	6.0e-100	57.66	PREDICTED: uncharacterized protein LOC103341035 [Prunus mume]	[more]
gi\|728832992\|gb\|KHG12435.1\|	3.9e-99	56.72	putative amino-acid racemase [Gossypium arboreum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006807	nitrogen compound metabolic process
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0036361	racemase activity, acting on amino acids and derivatives
GO:0016855	racemase and epimerase activity, acting on amino acids and derivatives

Vocabulary: **INTERPRO**
Term	Definition
IPR015942	Asp/Glu/hydantoin_racemase
IPR001920	Asp/Glu_race

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0008152	metabolic process
biological_process	GO:0006520	cellular amino acid metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0036361	racemase activity, acting on amino acids and derivatives
molecular_function	GO:0016855	racemase and epimerase activity, acting on amino acids and derivatives

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g09660.1	Cp4.1LG04g09660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001920	Asp/Glu racemase	GENE3D	G3DSA:3.40.50.1860		coord: 82..208 score: 5.3E-24coord: 210..311 score: 3.4
IPR001920	Asp/Glu racemase	unknown	SSF53681	Aspartate/glutamate racemase	coord: 83..203 score: 1.01E-11coord: 216..323 score: 2.29
IPR015942	Asp/Glu/hydantoin racemase	PFAM	PF01177	Asp_Glu_race	coord: 87..320 score: 2.6
None	No IPR available	PANTHER	PTHR21198	GLUTAMATE RACEMASE	coord: 75..333 score: 2.2E
None	No IPR available	PANTHER	PTHR21198:SF7	ASPARTATE-GLUTAMATE RACEMASE-LIKE PROTEIN	coord: 75..333 score: 2.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG04g09660	CmaCh10G005630	Cucurbita maxima (Rimu)	cmacpeB088
Cp4.1LG04g09660	CmoCh10G006060	Cucurbita moschata (Rifu)	cmocpeB064
Cp4.1LG04g09660	Carg09901	Silver-seed gourd	carcpeB0187

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG04g09660	Cp4.1LG18g04790	Cucurbita pepo (Zucchini)	cpecpeB365

The following block(s) are covering this gene:

None