CmaCh10G005630 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCTTGATGGTGGTATGGCTATGTCATTTTATGCATTGAATTGCCCAGCAGGTGTTCGACGAAATGCCAATGAGAGCGTTTTTCGGTTTAGAAGGAGATTAAACCAGTATTTATCTGTACAGATCTTCTCTGTTATTCAAACTGATGAGAATGACAACTTAGCAGCATCCAAGAAGATGTCGAGTTCGGGAAAATCTCTGTTGAAAACTCGAACTCTTAAGCCCCTTCTTGTCCAGCCAAATACTGTGGGTGTCATAGGGGGAGTGTCGGTTTTTTCCACTCTACTTTTCATGGAAAAGCTCGTTTGGTGGAGTAGGAAGGATGGAGAAGAGAGCATACCTTTTGTTGTCTGCAGCGATCCAGTATTAGACAAGGGAATTCCTCATAGTGATGCCATGATCATCGAGAATTTGAAGCAGAAAACGGCGTTTCTCGAGCAGTCGGGAGCTCGATGTCTAATCACACCTTGCCATCTTTCACATAGGTGGCTTGGTGACACATCTGAGAGCTCCAAATTACCTTTCCTTCACGTCGGAGATTGTGTAGCTAGTGAGCTTAATGAGGCTAAGCTTAAGCAACTTGAAGCAGGTAGCAATGTCCGGATTGGCTTGCTTGCAACTGATACAGCAACACTAACTGGTTTTTACCACGAGAGGCTACAAAAGCAGGTTTTGTAAATGCATTCACACCTCATGGTTGATACTCTAGTTTTTACTGCGAGAAGCTTGACTTATTCTCTAAAGTCCTCGAACAAAGTACATCCTTTGTTCGACACTTGAGTTGCTTTTGTCTGAACTTTCGAAGATTCTACTGACATGGCAAGTTAAGGACATCGTTCTAACACTATGTTAGGAATCATGACTCTCCACAATAGTATGATATTGTCTACTTTGAGTATAATCTCTCATAGCTTTGCTTTAGGCTTCTCCAAAAAACCTCGTACCAAGGGAGATAGTTTTCTTACTTTTATAAATCCATGATCATTCCCTAACAATCCTCAACATTTTTCTACACTAATTACTGAACGATCTCAAACTTTTCTTCTGAAGTCCTCGTGTTCTTACAGGGCTTTGATGTCGTCGTGCCGGACAAGGCAACCATGGAGCATATAGTAATTCCTGCAGTGGAAGCTTTCCATAAAAGGGATCATGAAGGAGCAAGAAATCTGTTGAGAATTGCCGTTCATGTGCTATTGACAAGGGCTGTGAATATGGTAATCCTTGCTTCTGATGAACTCCTTAATCTTCTTCCTCCAGATGACCCCATTCTGAAAAAATGCATTGACCCCATGGATGCGTTGGCCAGAGCAGCCATTAAATGGTCAAGATCTGCGGGACATCTCCATGAGAAAGCTTAGTGTTGCCTCTCTCGCTCACAAGCAAGCTCTATAATTTATGTAGGTTAGAAATCACGACTCTTCACAATGATATGATATAGTCCCTCTGAGCCTAAGCTCTTATGGTTTTGTTTTGGTTTCCCCAAAAACTTCGCAACAATAGAGATAGCACTCCTGGATTGTAAACCCATGATAATTCCCTAAATTAGGGGAGGCATGAAGGATGAAATATAAACAGGAACCAAGAAAGACCACAACATCGGAAGCCAGTCCACTGTCTAAATTATCATATTTATTTTATTTTTGTTTCTTAATTTTTGTATATAATTAGATTTGTAAAAAAAATAAATAAATAAATAATTGAAATTTATTTTCAGACCTCATACATAATAAAATATTTGCCTATTTTTTCAAATAATTTAGAAAAATATGGTGACAAGGACTTGAATGAAATATTTAGAGAAAGAAATTAAATTTATTTATAATGTTTGGATTTATTTATTTATTTATTTATTTATTTTCAGTTTAAACTTGGTCGAAATAATATTTAGTGAATTGACCAAAATGTAAAGAATAAATTTAAAAAAATCTTAAAAATAAGGACTAGGTTGAAAAAGTATTTATTTAATTGAATAAAAATGTTGGGTTTTATGAATATCTAAAAGTTATTATTATTATTATTTTGTAAAAAAAAAATAACAGTAGACAGAAAATGGACTCTGCTGAGCGGAGTGGAAAGGCCATGTATCTCGATGCATTTGAAGACTGGAACTCTAGACCTTGGAACTTTGTTCATCACGAATCGTCGGTTGAGTTTAATTTCGATTGATTTGGTAATTTTTTTTTAGTATCTGCTCTGACTCTGAATTCCATCCGTTCTTGTATTTTACAGATGATTAAGTTTGTTTACGAGGCGATGGAGGCGACTCTCGCTTTTCCACTGAGATTGAAGGTGTTGGGACGAAAATCGAAAGCGGGAAAGTAATGTAAGAGACGATTCAAATTCATAAAAACTACCGCCATTCAAACTTCGTACATTTAGAGCTTGTTCTTGATATGATTTTCGATTTCGTTAAAGTTTTGCAACGAACCTTTTTTCTTTTTTGAAATGTGTAGAGATGGTCTTGGTAGCTATGTGTATTTTGGATCTGTTCTTGTACAAGTTCAGGTGAGGAGTTTTCTATGATAAGTTAATTGGAATCTCCAAAGTAAAATAGGCTAATTAGATAATGAAGGCGAATTATGCTATATAATTCACCTGCAAAGGTTCTCTAGAGATTCGAGTTTTTTCTAGGGGACACCAAATCTTCTTTACAGCCACTGATGAAAGTTGGGTTTGACTCGCAATTTGAGCCTAATAATGTTGTTAGAAGGGCGTTTTCATTAATGTCCGTTGAAGTGGGGCATCTGGTTCTTGTCTATTTTTATACATAAGAATTTATTTCTTTGAGATTTGATGGTTGAAGAACGATAAATTATTGAGCTGAAAGTTGAGTCTATCTTATTAGGAGCTTGCTATTCACACAGATTCTGAATCTTAATCAATACCCCACCCTTTCAACCTTCCCCCTGGTTCAATCTCAAAGCTTCTATATGCTGACATAATAGTTCTCGTTTCAATTTGATTCTGTGTTTAAAGCAACCATTGACATTCCAAACAGTATTTGGATATGTTTGTTCTTGTTTTGCGCATCCATTAGATAGATAGATAGAGAGAGAGAGAGAGAGTAGCAAGCTATATTGCAATGCTAAAGAGGGGAAAATGGGCCTCCACCCATGATATCTATATTGAGGAGCATTCTAAGGGCTTAACATTATTGTTGTTAGTCATTACAAAAAGAAAAAGGAAAACAAAAGGCAGCATTTGGATAGGGATCGGATGCCAAGAAGACGATATAATCGCATAAGGAGAGCCTTCCAAAATTCCTTCCCGCTTTAAACTGCACCACCTAAAAGATAGAGCACCCAAAATTGAATCACACCCAAGTGACACACGGTAAATTAAACACTTTTTGAGGGGCAGTAGATAACAAAAAGGTGCAAATTATGTTTTTCATTGATATACACTCACCGAAACCTCTTGGTGTTTTGCATTTAAAACACTCCATCCTGCTTGCATAATTATGTATTCCGCATCCAATTCTGTACAACACAACATTATATGTTTTTTTCTTTCAGTTCAACATTACATGTTAATTAAACATATTGAATGCTGGTGCGAGTTTAAACAACATCAACCAATTTTATTGTACATTTTCACCGTGATCTTTTGAGTAAGGAATTTGAAATTCTGTTGCTGAAAGTAATGCAGGTGTGAATTATATTTCCATTTGAATGGCTTTACTATTTGGATAAATTTTTATTGTAAAGTTTATTGTTGTGTGTGTACCTAGGGCAAACCCAGTCTCCAGATTTCCATCCAGGTGGGATGCTTGCATCAGATCCATACTGATCGGAACCCATCATGTAGGCGCCATAATCACCGGGATAGACGGACTTAAATGCACCACATCTAAAGCAGTTCGGGCGGCTGGCGTAATTGTGAGCTCCGCAGCTGACGGCGGTGCAGTACCAGTCTCCGGCCAACACCTCCGTCTTGTTGTAACTGTAAGTTGAAGGGTCTGGGCCTCCATACTTGGGGTAACTGCAACGATGACATGCTTCTCTTTTCTTGAAATTTACGTTCTGGCAAACGTTGCATATCCAGTCTCCTGCTGACCAGCTCATTCCCTTCTATATATCAAAATACCATTATCCATAAGTTGAGAGAGAATCAAATAAAAAACTGCACAAAGGGTCTAAAAACTGTCATAATCTTCAAAAATGTTCAAGCTCTATGAATGCAATTGGAGTGCCAAAAAAAAAAAAAAAAAGAGGAAAAACTTAAAGACTTCAAAATTTGAGTACCCAATTTTCCCCAAATGCCTTGTCGATGGCTAGTGTATACACATATATTTCTTTTGTGGGGGGGGGGGAGGGGAGGTTGAATCCCAAGAGCTTTTTTCTCCCCTAATAACAGAAGCCCAATGGAGGAAAAAAAAAAAAGAAAAGGAATTTGACTACTGAAGTAGGAAGCTCACCTTGATGAAGAAAAGATGGATGTAATAAAGAATGGTTCTGTTGGGTAATAGGTGAATTGAATTGGTGGATGAGAATTCAAAATTGTTAGAAGTGAGTTTGTTGAATTTGTTTGCTGGGGGAGCGGGGGGTTTATATAGTTGGCNAAGTTCTCAGTGTTGGGGTCCATTTTATGGTGGTGTTTCTTTTATTCCTTGCCTTTACATGGATGGTTTCCTCCTCATGTGATTCCCGGAAGTTGATTATCTCTTTATTCTTAACACAGAAAAGGTTTGGCCCGAGGGGCAGCCCGGTTGGTAAGAGCTTGGAGTCTCGTAGGCATACTGGCTTAGATATCCCAAATTTGAATCTTCAGGTGAGCTTAATACTAGATTTCTTTTATGTTTCTTTTGTTCGGGGCTTGCGTTGGGCGTAGCTGCCCCCTATTATCTATAATATACATATATATCTTATTGAAAACTTCACATGGTAGATTAATTTCTTTAAGAAATACAAATCTATTCAGAAAGGTACATTTCATTCCTAGAAAAACAGACATCTCGTG ATGATGCTTGATGGTGGTATGGCTATGTCATTTTATGCATTGAATTGCCCAGCAGGTGTTCGACGAAATGCCAATGAGAGCGTTTTTCGGTTTAGAAGGAGATTAAACCAGTATTTATCTGTACAGATCTTCTCTGTTATTCAAACTGATGAGAATGACAACTTAGCAGCATCCAAGAAGATGTCGAGTTCGGGAAAATCTCTGTTGAAAACTCGAACTCTTAAGCCCCTTCTTGTCCAGCCAAATACTGTGGGTGTCATAGGGGGAGTGTCGGTTTTTTCCACTCTACTTTTCATGGAAAAGCTCGTTTGGTGGAGTAGGAAGGATGGAGAAGAGAGCATACCTTTTGTTGTCTGCAGCGATCCAGTATTAGACAAGGGAATTCCTCATAGTGATGCCATGATCATCGAGAATTTGAAGCAGAAAACGGCGTTTCTCGAGCAGTCGGGAGCTCGATGTCTAATCACACCTTGCCATCTTTCACATAGGTGGCTTGGTGACACATCTGAGAGCTCCAAATTACCTTTCCTTCACGTCGGAGATTGTGTAGCTAGTGAGCTTAATGAGGCTAAGCTTAAGCAACTTGAAGCAGGTAGCAATGGCTTTGATGTCGTCGTGCCGGACAAGGCAACCATGGAGCATATAGTAATTCCTGCAGTGGAAGCTTTCCATAAAAGGGATCATGAAGGAGCAAGAAATCTGTTGAGAATTGCCGTTCATGTGCTATTGACAAGGGCTGTGAATATGATGATTAAGTTTGTTTACGAGGCGATGGAGGCGACTCTCGCTTTTCCACTGAGATTGAAGGTGTTGGGACGAAAATCGAAAGCGGGAAAGTAATGGCAAACCCAGTCTCCAGATTTCCATCCAGGTGGGATGCTTGCATCAGATCCATACTGATCGGAACCCATCATGTAGGCGCCATAATCACCGGGATAGACGGACTTAAATGCACCACATCTAAAGCAGTTCGGGCGGCTGGCGTAATTGTGAGCTCCGCAGCTGACGGCGGTGCAGTACCAGTCTCCGGCCAACACCTCCGTCTTGTTGTAACTAAAAGGTTTGGCCCGAGGGGCAGCCCGGTTGGTAAGAGCTTGGAGTCTCGTAGGCATACTGGCTTAGATATCCCAAATTTGAATCTTCAGGTGAGCTTAATACTAGATTTCTTTTATGTTTCTTTTGTTCGGGGCTTGCGTTGGGCGTAGCTGCCCCCTATTATCTATAATATACATATATATCTTATTGAAAACTTCACATGGTAGATTAATTTCTTTAAGAAATACAAATCTATTCAGAAAGGTACATTTCATTCCTAGAAAAACAGACATCTCGTG ATGATGCTTGATGGTGGTATGGCTATGTCATTTTATGCATTGAATTGCCCAGCAGGTGTTCGACGAAATGCCAATGAGAGCGTTTTTCGGTTTAGAAGGAGATTAAACCAGTATTTATCTGTACAGATCTTCTCTGTTATTCAAACTGATGAGAATGACAACTTAGCAGCATCCAAGAAGATGTCGAGTTCGGGAAAATCTCTGTTGAAAACTCGAACTCTTAAGCCCCTTCTTGTCCAGCCAAATACTGTGGGTGTCATAGGGGGAGTGTCGGTTTTTTCCACTCTACTTTTCATGGAAAAGCTCGTTTGGTGGAGTAGGAAGGATGGAGAAGAGAGCATACCTTTTGTTGTCTGCAGCGATCCAGTATTAGACAAGGGAATTCCTCATAGTGATGCCATGATCATCGAGAATTTGAAGCAGAAAACGGCGTTTCTCGAGCAGTCGGGAGCTCGATGTCTAATCACACCTTGCCATCTTTCACATAGGTGGCTTGGTGACACATCTGAGAGCTCCAAATTACCTTTCCTTCACGTCGGAGATTGTGTAGCTAGTGAGCTTAATGAGGCTAAGCTTAAGCAACTTGAAGCAGGTAGCAATGGCTTTGATGTCGTCGTGCCGGACAAGGCAACCATGGAGCATATAGTAATTCCTGCAGTGGAAGCTTTCCATAAAAGGGATCATGAAGGAGCAAGAAATCTGTTGAGAATTGCCGTTCATGTGCTATTGACAAGGGCTGTGAATATGATGATTAAGTTTGTTTACGAGGCGATGGAGGCGACTCTCGCTTTTCCACTGAGATTGAAGGTGTTGGGACGAAAATCGAAAGCGGGAAAGTAA MMLDGGMAMSFYALNCPAGVRRNANESVFRFRRRLNQYLSVQIFSVIQTDENDNLAASKKMSSSGKSLLKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSDPVLDKGIPHSDAMIIENLKQKTAFLEQSGARCLITPCHLSHRWLGDTSESSKLPFLHVGDCVASELNEAKLKQLEAGSNGFDVVVPDKATMEHIVIPAVEAFHKRDHEGARNLLRIAVHVLLTRAVNMMIKFVYEAMEATLAFPLRLKVLGRKSKAGK
BLAST of CmaCh10G005630 vs. TrEMBL
Match: A0A0B0NHX0_GOSAR (Putative amino-acid racemase OS=Gossypium arboreum GN=F383_01324 PE=4 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 6.5e-70 Identity = 145/282 (51.42%), Postives = 193/282 (68.44%), Query Frame = 1
BLAST of CmaCh10G005630 vs. TrEMBL
Match: A0A0D2THP7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G019200 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 5.5e-69 Identity = 144/282 (51.06%), Postives = 191/282 (67.73%), Query Frame = 1
BLAST of CmaCh10G005630 vs. TrEMBL
Match: A0A061GM80_THECC (Amino-acid racemase isoform 2 OS=Theobroma cacao GN=TCM_038032 PE=4 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 1.8e-67 Identity = 145/292 (49.66%), Postives = 190/292 (65.07%), Query Frame = 1
BLAST of CmaCh10G005630 vs. TrEMBL
Match: A0A0D2PLJ3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G040900 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 2.3e-67 Identity = 140/291 (48.11%), Postives = 187/291 (64.26%), Query Frame = 1
BLAST of CmaCh10G005630 vs. TrEMBL
Match: A0A0B0NY59_GOSAR (Putative amino-acid racemase OS=Gossypium arboreum GN=F383_08904 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 1.6e-65 Identity = 141/291 (48.45%), Postives = 183/291 (62.89%), Query Frame = 1
BLAST of CmaCh10G005630 vs. TAIR10
Match: AT1G15410.1 (AT1G15410.1 aspartate-glutamate racemase family) HSP 1 Score: 204.1 bits (518), Expect = 1.1e-52 Identity = 114/266 (42.86%), Postives = 161/266 (60.53%), Query Frame = 1
BLAST of CmaCh10G005630 vs. NCBI nr
Match: gi|659130146|ref|XP_008465022.1| (PREDICTED: uncharacterized protein LOC103502741 isoform X1 [Cucumis melo]) HSP 1 Score: 377.9 bits (969), Expect = 1.6e-101 Identity = 202/290 (69.66%), Postives = 217/290 (74.83%), Query Frame = 1
BLAST of CmaCh10G005630 vs. NCBI nr
Match: gi|659130148|ref|XP_008465023.1| (PREDICTED: uncharacterized protein LOC103502741 isoform X2 [Cucumis melo]) HSP 1 Score: 377.1 bits (967), Expect = 2.7e-101 Identity = 203/298 (68.12%), Postives = 218/298 (73.15%), Query Frame = 1
BLAST of CmaCh10G005630 vs. NCBI nr
Match: gi|728832992|gb|KHG12435.1| (putative amino-acid racemase [Gossypium arboreum]) HSP 1 Score: 272.3 bits (695), Expect = 9.3e-70 Identity = 145/282 (51.42%), Postives = 193/282 (68.44%), Query Frame = 1
BLAST of CmaCh10G005630 vs. NCBI nr
Match: gi|823228977|ref|XP_012447232.1| (PREDICTED: uncharacterized protein LOC105770535 [Gossypium raimondii]) HSP 1 Score: 269.2 bits (687), Expect = 7.8e-69 Identity = 144/282 (51.06%), Postives = 191/282 (67.73%), Query Frame = 1
BLAST of CmaCh10G005630 vs. NCBI nr
Match: gi|719981111|ref|XP_010250025.1| (PREDICTED: uncharacterized protein LOC104592379 [Nelumbo nucifera]) HSP 1 Score: 265.4 bits (677), Expect = 1.1e-67 Identity = 145/293 (49.49%), Postives = 185/293 (63.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |