Cp4.1LG04g09560 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGGGCTTACAGAGGTCCGCCGTGTCGTTCCGGCGTCAGGGCTCCTCCGGCTTGGTCTGGGACGACAGATTCTACAGCGGCGAATTGAAACCCACAAAGCGTCACTATGAAGAACACCTTCAACCCGACGTCGTTTCTCTTTCCAAAGAGTTGAGGACTTGTCGCAGCGTCGGATCCACCGCCACCTCTGAAGGAACCCGATCTTCCACCGTCCACCGTATGGAGGTTATATCGCCGTCGCCAACGCCAAGTATGGGGGACCCATCTTCACCGAAGTTCACCGGCTGCGGATTCTGCGGCGTGTTTGGCCGCCCCATCGGCGGGTCTCGCCATCAGAAATCCAACAAACATTGA ATGACGGGCTTACAGAGGTCCGCCGTGTCGTTCCGGCGTCAGGGCTCCTCCGGCTTGGTCTGGGACGACAGATTCTACAGCGGCGAATTGAAACCCACAAAGCGTCACTATGAAGAACACCTTCAACCCGACGTCGTTTCTCTTTCCAAAGAGTTGAGGACTTGTCGCAGCGTCGGATCCACCGCCACCTCTGAAGGAACCCGATCTTCCACCGTCCACCGTATGGAGGTTATATCGCCGTCGCCAACGCCAAGTATGGGGGACCCATCTTCACCGAAGTTCACCGGCTGCGGATTCTGCGGCGTGTTTGGCCGCCCCATCGGCGGGTCTCGCCATCAGAAATCCAACAAACATTGA ATGACGGGCTTACAGAGGTCCGCCGTGTCGTTCCGGCGTCAGGGCTCCTCCGGCTTGGTCTGGGACGACAGATTCTACAGCGGCGAATTGAAACCCACAAAGCGTCACTATGAAGAACACCTTCAACCCGACGTCGTTTCTCTTTCCAAAGAGTTGAGGACTTGTCGCAGCGTCGGATCCACCGCCACCTCTGAAGGAACCCGATCTTCCACCGTCCACCGTATGGAGGTTATATCGCCGTCGCCAACGCCAAGTATGGGGGACCCATCTTCACCGAAGTTCACCGGCTGCGGATTCTGCGGCGTGTTTGGCCGCCCCATCGGCGGGTCTCGCCATCAGAAATCCAACAAACATTGA MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHYEEHLQPDVVSLSKELRTCRSVGSTATSEGTRSSTVHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNKH
BLAST of Cp4.1LG04g09560 vs. Swiss-Prot
Match: Y1540_ARATH (Uncharacterized protein At1g15400 OS=Arabidopsis thaliana GN=At1g15400 PE=1 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 1.4e-06 Identity = 46/133 (34.59%), Postives = 63/133 (47.37%), Query Frame = 1
BLAST of Cp4.1LG04g09560 vs. TrEMBL
Match: A0A0A0LTQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G308810 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 1.6e-33 Identity = 82/121 (67.77%), Postives = 90/121 (74.38%), Query Frame = 1
BLAST of Cp4.1LG04g09560 vs. TrEMBL
Match: W1P3Q9_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00081p00126720 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 3.3e-15 Identity = 51/106 (48.11%), Postives = 62/106 (58.49%), Query Frame = 1
BLAST of Cp4.1LG04g09560 vs. TrEMBL
Match: A0A0A0KYE3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G004870 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.6e-14 Identity = 51/121 (42.15%), Postives = 65/121 (53.72%), Query Frame = 1
BLAST of Cp4.1LG04g09560 vs. TrEMBL
Match: A0A061GNA6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_038043 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.6e-14 Identity = 54/117 (46.15%), Postives = 71/117 (60.68%), Query Frame = 1
BLAST of Cp4.1LG04g09560 vs. TrEMBL
Match: A0A059CN55_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C01136 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 2.1e-14 Identity = 52/118 (44.07%), Postives = 68/118 (57.63%), Query Frame = 1
BLAST of Cp4.1LG04g09560 vs. TAIR10
Match: AT5G20100.1 (AT5G20100.1 unknown protein) HSP 1 Score: 61.2 bits (147), Expect = 4.8e-10 Identity = 41/119 (34.45%), Postives = 61/119 (51.26%), Query Frame = 1
BLAST of Cp4.1LG04g09560 vs. TAIR10
Match: AT1G15400.3 (AT1G15400.3 unknown protein) HSP 1 Score: 53.9 bits (128), Expect = 7.7e-08 Identity = 46/133 (34.59%), Postives = 63/133 (47.37%), Query Frame = 1
BLAST of Cp4.1LG04g09560 vs. TAIR10
Match: AT1G80180.1 (AT1G80180.1 unknown protein) HSP 1 Score: 47.8 bits (112), Expect = 5.5e-06 Identity = 20/24 (83.33%), Postives = 22/24 (91.67%), Query Frame = 1
BLAST of Cp4.1LG04g09560 vs. NCBI nr
Match: gi|659130156|ref|XP_008465027.1| (PREDICTED: uncharacterized protein At1g15400 [Cucumis melo]) HSP 1 Score: 159.1 bits (401), Expect = 4.8e-36 Identity = 84/119 (70.59%), Postives = 93/119 (78.15%), Query Frame = 1
BLAST of Cp4.1LG04g09560 vs. NCBI nr
Match: gi|449467793|ref|XP_004151607.1| (PREDICTED: uncharacterized protein At1g15400 [Cucumis sativus]) HSP 1 Score: 150.2 bits (378), Expect = 2.2e-33 Identity = 82/121 (67.77%), Postives = 90/121 (74.38%), Query Frame = 1
BLAST of Cp4.1LG04g09560 vs. NCBI nr
Match: gi|719995013|ref|XP_010254356.1| (PREDICTED: uncharacterized protein At1g15400 [Nelumbo nucifera]) HSP 1 Score: 89.7 bits (221), Expect = 3.6e-15 Identity = 55/117 (47.01%), Postives = 70/117 (59.83%), Query Frame = 1
BLAST of Cp4.1LG04g09560 vs. NCBI nr
Match: gi|586690180|ref|XP_006842842.1| (PREDICTED: uncharacterized protein At1g15400 [Amborella trichopoda]) HSP 1 Score: 89.4 bits (220), Expect = 4.7e-15 Identity = 51/106 (48.11%), Postives = 62/106 (58.49%), Query Frame = 1
BLAST of Cp4.1LG04g09560 vs. NCBI nr
Match: gi|743893602|ref|XP_011040039.1| (PREDICTED: uncharacterized protein At1g15400 [Populus euphratica]) HSP 1 Score: 87.4 bits (215), Expect = 1.8e-14 Identity = 58/127 (45.67%), Postives = 76/127 (59.84%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |