Cp4.1LG04g08820 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g08820
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionEndonuclease/exonuclease/phosphatase domain-containing protein
LocationCp4.1LG04 : 10453069 .. 10455387 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACAAGAAGAAAAAAGAAAGAAAATAGTCACCTTGGCCTTTCAAGATTAGTCACGTGATCCAGGCATCGAGTTGTGGGCACTCACGTGCGTCGTCAAACCCCAGTGCCCTGCCCTCCCTTCGGACATGACCAAATTAAATTAGGATTTCTTTCCCCCTCCCTCTCTAATCTCAGCTACTTTTGATTCTTTACCCGTACCGGAAGGATCGAATGTACCGATAGGTTCTAGCTACTGCTGATCCTTTTTGGTTCTTAAAATCAGTAATCAACAAAAAGTAGGGATTTTCGAATTCTGGAAGAGAAAAATGAGTGTTACTTTGACTGTAATGACATTCAATCTCCATGATGATCAACCACCAGAGAGCTCAAATTCTTGGGAGAAGAGGAGGGACTTGTGTATCAGTGTCATCACTAGCTACTCGCCCGCGATTCTCTGCACTCAGCAAGGTAGCTCCCTTTTCCTTTACTCCTCTGCTACTCTACTTTATCGGATTTCATATTTGATCCTGTGAATGCCTTGTGGATCTTGATCATTGGTGCGATTTTGTTGCAATAATTGATCTGGGTCTTGTTTGAATCGAGTTTTCTTGGTGGGTTTTTGGTGCTTTATGATTTCATTCGAGTTTTGGGTTGTTTTGTTAGGAAGCTTCAATGGAGTAGTGTGGCCATTTTGGTGGAACTTTTTTTTGTGGACGAACTTCAATGATTGAGTTCAATACACTTGATCTAGGAAGAAACTAATGAACTGCTACCATTTCCTTCTCTGATTCCTTCATTTCTCTATTGGGTTCAGGTGTGAAATCTCAGTTGGACTTTCTTCAGCAGGGCTTGCCTGGTATGTTAGCTTGTTATTGTTCAGTTCATATTGGGTTAGAAGTTCTTTTTGTACGTTCTCTACGAATGTGGAGCTGAAATTTTTAACATCTTTGAGGGGAAGATCATAAAGCAAGTTCTTATAACTTAGAAGTATTAATTCTCTTTCAGGCTATGGCCAATTCGGAGTTTCAAGAAAAGGATCCAGAGACACATCAGATGAACACTGCACAATCTTCTACGACAAGGAGAAGGTATTGAATTTTGGTTCAAGTCTGATAATCCAGTGTGGTTTTTTATGCTTCACTGTTTGTTTCTTCGATTAAAAAGGTTGAGCTGTTAGAAGGTGGCACATTTTGGTTATCAGAATCACCTTCTGTCCCGGGAAGCATGTCGTGGGGTTCGATCGTTCCGCATATTGCAACGTGGGCGATATCCTTGAGATTTCATTATATTTTAACCTATCCATTAGACTTTGTGTTATTTGTTAACTTGACAGACTGCCCACACATTCGAACTGAAAGGAATCGAGCCTCCTGGGTTCTCATTTCAGATAGTGAATACGAGCATGGATGAGCTCAACCCTCGTGCTCGTAGACGAAGCGCTTTACTTACATGGCAGCACATTGCATCCTTACCTCCTAGCTTGCCAGTTATATATTGTGGAGGTTTCAACACAGAAAAGGAATCAACTACTGGTCGTTTTCTTCTTGGGAGATCCAGGTAACTGAAACAACATTTTCTGTCTTAATCAGCCTTATTAGCTCGCATAGTTCATTTATCTTAACAGATCTTGTCGTCCATGGTGGCAGAGAAAAAGGTGCAGTTGGGGACATGAGAGATACATGGGCGATTGCTCGGGCAAGGAAGAATGTTTCTCTTATTCGAACGTATCATGGCTTCAAAGGTATGCAATTTAGCTAAGACAAACTTGCTTAGGAGCGCGTTCGACCTTTGCTCGACTCGTTGAGACTCTTTTTTCAGGTGACAAACAGGGAGCTTTTGAATTTTTCAAGTTGATTCTAAGAGCACTCTGCCTTTGCTGGGATCGCCAGACCCAAGATCTACATGTAGATTGGATTCTTTTCAGAGGTAGATCTTTGATCCCTGTCGTGTGCGAAGTGGTAAACGATAATATCGACGGATTTTACCCGTCGTCTCACTACCCTTTGTTTTCCGAATTCATGCTTCCTCGAACCGTCAGAATGCTCGAAACAACAACTACTACTCAAGAGTGACACTAAATCACCATTTGTTATAACTCAGAATTCTCCATTGTTCTCTGTTTAAGCTCCAAATGATGTGTTTGTTGATGTAGAAGTTCATGTTTATAGCAGCAAGTTTTCTCTACTGGTTTACACTGTATGATAACCTTCAAATGACCACTTGAATTACTTCCAAAATGGTCATTGGTATTATTTTGCTTCTGAGAGAGTTCAAAGTTGTATCAAGTTTTCTTCTATGACAAGAAGTTGTTTCAAGAATGTGATTCATTGTTGATTTTCG

mRNA sequence

AACAAGAAGAAAAAAGAAAGAAAATAGTCACCTTGGCCTTTCAAGATTAGTCACGTGATCCAGGCATCGAGTTGTGGGCACTCACGTGCGTCGTCAAACCCCAGTGCCCTGCCCTCCCTTCGGACATGACCAAATTAAATTAGGATTTCTTTCCCCCTCCCTCTCTAATCTCAGCTACTTTTGATTCTTTACCCGTACCGGAAGGATCGAATGTACCGATAGGTTCTAGCTACTGCTGATCCTTTTTGGTTCTTAAAATCAGTAATCAACAAAAAGTAGGGATTTTCGAATTCTGGAAGAGAAAAATGAGTGTTACTTTGACTGTAATGACATTCAATCTCCATGATGATCAACCACCAGAGAGCTCAAATTCTTGGGAGAAGAGGAGGGACTTGTGTATCAGTGTCATCACTAGCTACTCGCCCGCGATTCTCTGCACTCAGCAAGGTGTGAAATCTCAGTTGGACTTTCTTCAGCAGGGCTTGCCTGGCTATGGCCAATTCGGAGTTTCAAGAAAAGGATCCAGAGACACATCAGATGAACACTGCACAATCTTCTACGACAAGGAGAAGACTGCCCACACATTCGAACTGAAAGGAATCGAGCCTCCTGGGTTCTCATTTCAGATAGTGAATACGAGCATGGATGAGCTCAACCCTCGTGCTCGTAGACGAAGCGCTTTACTTACATGGCAGCACATTGCATCCTTACCTCCTAGCTTGCCAGTTATATATTGTGGAGGTTTCAACACAGAAAAGGAATCAACTACTGGTCGTTTTCTTCTTGGGAGATCCAGAGAAAAAGGTGCAGTTGGGGACATGAGAGATACATGGGCGATTGCTCGGGCAAGGAAGAATGTTTCTCTTATTCGAACGTATCATGGCTTCAAAGGTGACAAACAGGGAGCTTTTGAATTTTTCAAGTTGATTCTAAGAGCACTCTGCCTTTGCTGGGATCGCCAGACCCAAGATCTACATGTAGATTGGATTCTTTTCAGAGGTAGATCTTTGATCCCTGTCGTGTGCGAAGTGGTAAACGATAATATCGACGGATTTTACCCGTCGTCTCACTACCCTTTGTTTTCCGAATTCATGCTTCCTCGAACCGTCAGAATGCTCGAAACAACAACTACTACTCAAGAGTGACACTAAATCACCATTTGTTATAACTCAGAATTCTCCATTGTTCTCTGTTTAAGCTCCAAATGATGTGTTTGTTGATGTAGAAGTTCATGTTTATAGCAGCAAGTTTTCTCTACTGGTTTACACTGTATGATAACCTTCAAATGACCACTTGAATTACTTCCAAAATGGTCATTGGTATTATTTTGCTTCTGAGAGAGTTCAAAGTTGTATCAAGTTTTCTTCTATGACAAGAAGTTGTTTCAAGAATGTGATTCATTGTTGATTTTCG

Coding sequence (CDS)

ATGAGTGTTACTTTGACTGTAATGACATTCAATCTCCATGATGATCAACCACCAGAGAGCTCAAATTCTTGGGAGAAGAGGAGGGACTTGTGTATCAGTGTCATCACTAGCTACTCGCCCGCGATTCTCTGCACTCAGCAAGGTGTGAAATCTCAGTTGGACTTTCTTCAGCAGGGCTTGCCTGGCTATGGCCAATTCGGAGTTTCAAGAAAAGGATCCAGAGACACATCAGATGAACACTGCACAATCTTCTACGACAAGGAGAAGACTGCCCACACATTCGAACTGAAAGGAATCGAGCCTCCTGGGTTCTCATTTCAGATAGTGAATACGAGCATGGATGAGCTCAACCCTCGTGCTCGTAGACGAAGCGCTTTACTTACATGGCAGCACATTGCATCCTTACCTCCTAGCTTGCCAGTTATATATTGTGGAGGTTTCAACACAGAAAAGGAATCAACTACTGGTCGTTTTCTTCTTGGGAGATCCAGAGAAAAAGGTGCAGTTGGGGACATGAGAGATACATGGGCGATTGCTCGGGCAAGGAAGAATGTTTCTCTTATTCGAACGTATCATGGCTTCAAAGGTGACAAACAGGGAGCTTTTGAATTTTTCAAGTTGATTCTAAGAGCACTCTGCCTTTGCTGGGATCGCCAGACCCAAGATCTACATGTAGATTGGATTCTTTTCAGAGGTAGATCTTTGATCCCTGTCGTGTGCGAAGTGGTAAACGATAATATCGACGGATTTTACCCGTCGTCTCACTACCCTTTGTTTTCCGAATTCATGCTTCCTCGAACCGTCAGAATGCTCGAAACAACAACTACTACTCAAGAGTGA

Protein sequence

MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQQGVKSQLDFLQQGLPGYGQFGVSRKGSRDTSDEHCTIFYDKEKTAHTFELKGIEPPGFSFQIVNTSMDELNPRARRRSALLTWQHIASLPPSLPVIYCGGFNTEKESTTGRFLLGRSREKGAVGDMRDTWAIARARKNVSLIRTYHGFKGDKQGAFEFFKLILRALCLCWDRQTQDLHVDWILFRGRSLIPVVCEVVNDNIDGFYPSSHYPLFSEFMLPRTVRMLETTTTTQE
Homology
[Close]
BLAST of Cp4.1LG04g08820 vs. TrEMBL
Match: A0A0B0P3J4_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_02575 PE=4 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 4.4e-135
Identity = 230/297 (77.44%), Postives = 255/297 (85.86%), Query Frame = 1 

Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQQGVKSQLDFLQQGL 60
           MSV+LTVMTFNLH+D+  +S NSWEKRRDLCISVITSYSP ILCTQQGVKSQLD+LQQGL
Sbjct: 1   MSVSLTVMTFNLHEDESEDSPNSWEKRRDLCISVITSYSPIILCTQQGVKSQLDYLQQGL 60

Query: 61  PGYGQFGVSRKGSRDTSDEHCTIFYDKEKT----AHTFELK--------------GIEPP 120
           PGY QFG+SRKG +DTSDE CTIFYDKEK       TF L               G+EPP
Sbjct: 61  PGYDQFGISRKGPQDTSDECCTIFYDKEKVELIEGGTFWLSESPSVPGSTSWGSVGVEPP 120

Query: 121 GFSFQIVNTSMDELNPRARRRSALLTWQHIASLPPSLPVIYCGGFNTEKESTTGRFLLGR 180
           GFSFQ+VNTSMDE +PRARRRSALLTWQHIASLPPSLPV+YCGGFNT+KESTTGRFLLGR
Sbjct: 121 GFSFQVVNTSMDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNTQKESTTGRFLLGR 180

Query: 181 SREKGAVGDMRDTWAIARARKNVSLIRTYHGFKGDKQGAFEFFKLILRALCLCWDRQTQD 240
           SRE G VGDMRD W  AR RKNVSLIRTYHGFKGDKQGA EF KL+ RALCLCWDRQTQD
Sbjct: 181 SREHGVVGDMRDVWPNARVRKNVSLIRTYHGFKGDKQGALEFLKLVFRALCLCWDRQTQD 240

Query: 241 LHVDWILFRGRSLIPVVCEVVNDNIDGFYPSSHYPLFSEFMLPRTVRMLETTTTTQE 280
           LH+DWILFRGRSLIPV+C+VVNDN+DG+YPSSHYP+F+EF+LPRTVR++E  T+TQ+
Sbjct: 241 LHIDWILFRGRSLIPVLCQVVNDNMDGYYPSSHYPIFAEFLLPRTVRLMEPPTSTQD 297

[Close]
BLAST of Cp4.1LG04g08820 vs. TrEMBL
Match: I1JGP9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G204100 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 8.6e-131
Identity = 229/304 (75.33%), Postives = 248/304 (81.58%), Query Frame = 1 

Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQQGVKSQLDFLQQGL 60
           MSV+LTVMTFNLHDD+P +S NSWEKRRD+CISVITSYSP ILCTQQGVK+QLDFLQQGL
Sbjct: 1   MSVSLTVMTFNLHDDEPQDSPNSWEKRRDMCISVITSYSPIILCTQQGVKAQLDFLQQGL 60

Query: 61  PGYGQFGVSRKGSRDTSDEHCTIFYDKEKT----AHTFELK-----------GIEP---- 120
           PGY QFG+SRKG +DT+D+HCTIFYDKEK       TF L            G E     
Sbjct: 61  PGYDQFGISRKGPQDTTDQHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSEVPCIA 120

Query: 121 ------------PGFSFQIVNTSMDELNPRARRRSALLTWQHIASLPPSLPVIYCGGFNT 180
                       PGFSFQIVNT+MDE +PRARRRSALLTWQHIASLPPSLPV+YCGGFNT
Sbjct: 121 TWATFQLKGVEPPGFSFQIVNTNMDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNT 180

Query: 181 EKESTTGRFLLGRSREKGAVGDMRDTWAIARARKNVSLIRTYHGFKGDKQGAFEFFKLIL 240
           +KESTTGRFLLGRSRE G VGDMRD W  AR RKNVSLI TYHGFKGDKQG  EF KLI 
Sbjct: 181 QKESTTGRFLLGRSREHGVVGDMRDAWPSARVRKNVSLIHTYHGFKGDKQGTLEFLKLIF 240

Query: 241 RALCLCWDRQTQDLHVDWILFRGRSLIPVVCEVVNDNIDGFYPSSHYPLFSEFMLPRTVR 274
           RALCLCWDRQTQDLH+DWILFRGRSLIPV CEVVNDNIDG+YPSSH+P+F+EFMLPRTVR
Sbjct: 241 RALCLCWDRQTQDLHIDWILFRGRSLIPVSCEVVNDNIDGYYPSSHFPIFAEFMLPRTVR 300

[Close]
BLAST of Cp4.1LG04g08820 vs. TrEMBL
Match: B9IMD6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s11590g PE=4 SV=2)

HSP 1 Score: 473.4 bits (1217), Expect = 1.9e-130
Identity = 228/299 (76.25%), Postives = 249/299 (83.28%), Query Frame = 1 

Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQQGVKSQLDFLQQGL 60
           MSV+LTVMTFNLHDDQ  +S NSWEKR+DLCISV+TSYSP ILCTQQGVK+QLD+LQQ L
Sbjct: 1   MSVSLTVMTFNLHDDQAEDSPNSWEKRKDLCISVVTSYSPMILCTQQGVKTQLDYLQQCL 60

Query: 61  PGYGQFGVSRKGSRDTSDEHCTIFYDKEKTA----HTFELK----------------GIE 120
           PGYGQFG+SRKGS+D+ DEHCTIFYDKEK       TF L                  IE
Sbjct: 61  PGYGQFGISRKGSQDSLDEHCTIFYDKEKVELLEDGTFWLSESPSVPGSMSWGAAVPWIE 120

Query: 121 PPGFSFQIVNTSMDELNPRARRRSALLTWQHIASLPPSLPVIYCGGFNTEKESTTGRFLL 180
           PPGFS QIVNT+MDE +PRARRRSALLTWQHIASLPPSLPV+YCGGFNT KESTTGRFLL
Sbjct: 121 PPGFSLQIVNTNMDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNTHKESTTGRFLL 180

Query: 181 GRSREKGAVGDMRDTWAIARARKNVSLIRTYHGFKGDKQGAFEFFKLILRALCLCWDRQT 240
           GRS E G VGDMRDTW  A+ RKNVSL+ T+H FKGDKQGA EFFKLILRALCLCWDRQT
Sbjct: 181 GRSSEHGVVGDMRDTWPNAQVRKNVSLVHTFHDFKGDKQGALEFFKLILRALCLCWDRQT 240

Query: 241 QDLHVDWILFRGRSLIPVVCEVVNDNIDGFYPSSHYPLFSEFMLPRTVRMLETTTTTQE 280
           QDLHVDWILFRGRSLIPV CEVVNDNI+G YPSSHYP+F+EFMLPR+VR+LE   T +E
Sbjct: 241 QDLHVDWILFRGRSLIPVQCEVVNDNINGRYPSSHYPIFAEFMLPRSVRLLEPPLTAEE 299

[Close]
BLAST of Cp4.1LG04g08820 vs. TrEMBL
Match: A0A164ZN17_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_019393 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 3.3e-130
Identity = 222/303 (73.27%), Postives = 250/303 (82.51%), Query Frame = 1 

Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQQGVKSQLDFLQQGL 60
           M+++LTVMTFNL +DQP +S NSW KRRDLCISVITSYSP I+CTQQGVKSQLD+LQQ L
Sbjct: 1   MNLSLTVMTFNLLEDQPEDSQNSWMKRRDLCISVITSYSPMIICTQQGVKSQLDYLQQCL 60

Query: 61  PGYGQFGVSRKGSRDTSDEHCTIFYDKEK------------------------------- 120
           PGY QFG+SRKG+ DTSDEHCTIFYDKEK                               
Sbjct: 61  PGYDQFGISRKGTEDTSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGCEVPCIA 120

Query: 121 TAHTFELKGIEPPGFSFQIVNTSMDELNPRARRRSALLTWQHIASLPPSLPVIYCGGFNT 180
           T  TF+LKG+EPPGFSFQ+VNT+MDEL+PRARRRSALLTWQHIASLPPSLPV+YCGGFNT
Sbjct: 121 TWTTFQLKGVEPPGFSFQVVNTNMDELSPRARRRSALLTWQHIASLPPSLPVVYCGGFNT 180

Query: 181 EKESTTGRFLLGRSREKGAVGDMRDTWAIARARKNVSLIRTYHGFKGDKQGAFEFFKLIL 240
           +KESTTGRFLLGRSRE G VGDM+D W+ AR RKNVSLIRTYHGFKGDKQGA EF KL+ 
Sbjct: 181 QKESTTGRFLLGRSREHGVVGDMKDAWSNARVRKNVSLIRTYHGFKGDKQGALEFLKLVF 240

Query: 241 RALCLCWDRQTQDLHVDWILFRGRSLIPVVCEVVNDNIDGFYPSSHYPLFSEFMLPRTVR 273
           RA CLCWDRQTQDLHVDWIL+RGR+L+PV  EVV+DNIDGFYPSSHYP+++EFMLPR+VR
Sbjct: 241 RAFCLCWDRQTQDLHVDWILYRGRALVPVSSEVVSDNIDGFYPSSHYPVYAEFMLPRSVR 300

[Close]
BLAST of Cp4.1LG04g08820 vs. TrEMBL
Match: A0A0R0F973_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G073700 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 3.3e-130
Identity = 230/304 (75.66%), Postives = 247/304 (81.25%), Query Frame = 1 

Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQQGVKSQLDFLQQGL 60
           MSV+LTVMTFNL+DD+P +S NSWEKRRDLCISVITSYSP ILCTQQGVK+QLDFLQQGL
Sbjct: 1   MSVSLTVMTFNLYDDEPQDSPNSWEKRRDLCISVITSYSPIILCTQQGVKAQLDFLQQGL 60

Query: 61  PGYGQFGVSRKGSRDTSDEHCTIFYDKEKT----AHTFELK-----------GIEP---- 120
           PGY QFG+SRKG +DT+ EHCTIFYDKEK       TF L            G E     
Sbjct: 61  PGYDQFGISRKGPQDTTSEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSEVPCIA 120

Query: 121 ------------PGFSFQIVNTSMDELNPRARRRSALLTWQHIASLPPSLPVIYCGGFNT 180
                       PGFSFQIVNT MDE +PRARRRSALLTWQHIASLPPSLPV+YCGGFNT
Sbjct: 121 TWATFQLKGVEPPGFSFQIVNTIMDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNT 180

Query: 181 EKESTTGRFLLGRSREKGAVGDMRDTWAIARARKNVSLIRTYHGFKGDKQGAFEFFKLIL 240
           +KESTTGRFLLGRSRE G VGDMRD W  AR RKNVSLIRTYHGFKGDKQG  EF KLI 
Sbjct: 181 QKESTTGRFLLGRSREHGVVGDMRDAWPSARVRKNVSLIRTYHGFKGDKQGTLEFLKLIF 240

Query: 241 RALCLCWDRQTQDLHVDWILFRGRSLIPVVCEVVNDNIDGFYPSSHYPLFSEFMLPRTVR 274
           RALCLCWDRQTQDLH+DWILFRGRSLIPV CEVVNDNIDG+YPSSH+P+F+EFMLPRTVR
Sbjct: 241 RALCLCWDRQTQDLHIDWILFRGRSLIPVSCEVVNDNIDGYYPSSHFPIFAEFMLPRTVR 300

[Close]
BLAST of Cp4.1LG04g08820 vs. TAIR10
Match: AT4G30900.1 (AT4G30900.1 DNAse I-like superfamily protein)

HSP 1 Score: 411.8 bits (1057), Expect = 3.4e-115
Identity = 201/305 (65.90%), Postives = 233/305 (76.39%), Query Frame = 1 

Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQQGVKSQLDFLQQGL 60
           MSV+L+VM+FNLHDD P ES NSW KR+DLC++VITSYSP +LCTQQGVKSQLD+LQQGL
Sbjct: 1   MSVSLSVMSFNLHDDLPEESPNSWLKRKDLCLTVITSYSPIVLCTQQGVKSQLDYLQQGL 60

Query: 61  P-----GYGQFGVSRKG--------SRDTSD--EHCTIFYDKEK---------------- 120
           P     G  + G             +++  +  E  T +  +                  
Sbjct: 61  PAYDQFGISRTGPGDANDEHCTIFFNKEKVELLEGGTFWLSESPSVPGSTAWGSAVPCIA 120

Query: 121 TAHTFELKGIEPPGFSFQIVNTSMDELNPRARRRSALLTWQHIASLPPSLPVIYCGGFNT 180
           T  TF+LKG EPPGFSFQIVNT++DE++PRARRRSALLTWQHIASLPP+LPV+YCGGFNT
Sbjct: 121 TWATFQLKGAEPPGFSFQIVNTNLDEISPRARRRSALLTWQHIASLPPTLPVVYCGGFNT 180

Query: 181 EKESTTGRFLLGRSREKGAVGDMRDTWAIARARKNVSLIRTYHGFKGDKQGAFEFFKLIL 240
           +KESTTGRFLLGRSRE G VGDMRD W  AR RKNV+LIRTYH FKGDKQG  EF KLI 
Sbjct: 181 QKESTTGRFLLGRSREHGVVGDMRDAWPSARVRKNVALIRTYHDFKGDKQGTVEFLKLIF 240

Query: 241 RALCLCWDRQTQDLHVDWILFRGRSLIPVVCEVVNDNIDGFYPSSHYPLFSEFMLPRTVR 275
           RALCLCWDRQTQDLH DWIL+RGRS++PV+CE+VND ID  YPSSHYP+F+EFMLPR+VR
Sbjct: 241 RALCLCWDRQTQDLHTDWILYRGRSIVPVMCEIVNDKIDDLYPSSHYPVFAEFMLPRSVR 300

[Close]
BLAST of Cp4.1LG04g08820 vs. NCBI nr
Match: gi|728841835|gb|KHG21278.1| (Uncharacterized protein F383_02575 [Gossypium arboreum])

HSP 1 Score: 488.8 bits (1257), Expect = 6.3e-135
Identity = 230/297 (77.44%), Postives = 255/297 (85.86%), Query Frame = 1 

Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQQGVKSQLDFLQQGL 60
           MSV+LTVMTFNLH+D+  +S NSWEKRRDLCISVITSYSP ILCTQQGVKSQLD+LQQGL
Sbjct: 1   MSVSLTVMTFNLHEDESEDSPNSWEKRRDLCISVITSYSPIILCTQQGVKSQLDYLQQGL 60

Query: 61  PGYGQFGVSRKGSRDTSDEHCTIFYDKEKT----AHTFELK--------------GIEPP 120
           PGY QFG+SRKG +DTSDE CTIFYDKEK       TF L               G+EPP
Sbjct: 61  PGYDQFGISRKGPQDTSDECCTIFYDKEKVELIEGGTFWLSESPSVPGSTSWGSVGVEPP 120

Query: 121 GFSFQIVNTSMDELNPRARRRSALLTWQHIASLPPSLPVIYCGGFNTEKESTTGRFLLGR 180
           GFSFQ+VNTSMDE +PRARRRSALLTWQHIASLPPSLPV+YCGGFNT+KESTTGRFLLGR
Sbjct: 121 GFSFQVVNTSMDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNTQKESTTGRFLLGR 180

Query: 181 SREKGAVGDMRDTWAIARARKNVSLIRTYHGFKGDKQGAFEFFKLILRALCLCWDRQTQD 240
           SRE G VGDMRD W  AR RKNVSLIRTYHGFKGDKQGA EF KL+ RALCLCWDRQTQD
Sbjct: 181 SREHGVVGDMRDVWPNARVRKNVSLIRTYHGFKGDKQGALEFLKLVFRALCLCWDRQTQD 240

Query: 241 LHVDWILFRGRSLIPVVCEVVNDNIDGFYPSSHYPLFSEFMLPRTVRMLETTTTTQE 280
           LH+DWILFRGRSLIPV+C+VVNDN+DG+YPSSHYP+F+EF+LPRTVR++E  T+TQ+
Sbjct: 241 LHIDWILFRGRSLIPVLCQVVNDNMDGYYPSSHYPIFAEFLLPRTVRLMEPPTSTQD 297

[Close]
BLAST of Cp4.1LG04g08820 vs. NCBI nr
Match: gi|694354423|ref|XP_009358437.1| (PREDICTED: uncharacterized protein LOC103949067 [Pyrus x bretschneideri])

HSP 1 Score: 483.0 bits (1242), Expect = 3.5e-133
Identity = 230/303 (75.91%), Postives = 250/303 (82.51%), Query Frame = 1 

Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQQGVKSQLDFLQQGL 60
           MSV+LTVMTFNLH+DQ  +S  SW+KRRDLCISVITSYSP ILCTQQGVKSQLD+LQQ L
Sbjct: 1   MSVSLTVMTFNLHEDQTEDSPYSWDKRRDLCISVITSYSPIILCTQQGVKSQLDYLQQCL 60

Query: 61  PGYGQFGVSRKGSRDTSDEHCTIFYDKEK------------------------------- 120
           PGY QFG+SRKG  DTSDEHCTIFYDKEK                               
Sbjct: 61  PGYDQFGISRKGPEDTSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSEVPCIA 120

Query: 121 TAHTFELKGIEPPGFSFQIVNTSMDELNPRARRRSALLTWQHIASLPPSLPVIYCGGFNT 180
           T  TF+LKG EPPGFSFQIVNT+MDE +PRARRRSALLTWQHIASLPP LPV+YCGGFNT
Sbjct: 121 TWVTFQLKGAEPPGFSFQIVNTNMDEFSPRARRRSALLTWQHIASLPPGLPVVYCGGFNT 180

Query: 181 EKESTTGRFLLGRSREKGAVGDMRDTWAIARARKNVSLIRTYHGFKGDKQGAFEFFKLIL 240
           +KESTTGRFLLGRSRE GAVGDMRD W  AR RKNVSLIRT+HGFKGDKQGA EF KL+ 
Sbjct: 181 QKESTTGRFLLGRSREHGAVGDMRDAWPNARVRKNVSLIRTFHGFKGDKQGALEFLKLVF 240

Query: 241 RALCLCWDRQTQDLHVDWILFRGRSLIPVVCEVVNDNIDGFYPSSHYPLFSEFMLPRTVR 273
           RALCLCWDRQTQDLHVDWILFRGRSLIPV+CEVV+DNIDG+YPSSHYP+F+EFMLPRTVR
Sbjct: 241 RALCLCWDRQTQDLHVDWILFRGRSLIPVLCEVVSDNIDGYYPSSHYPIFAEFMLPRTVR 300

[Close]
BLAST of Cp4.1LG04g08820 vs. NCBI nr
Match: gi|658063656|ref|XP_008367748.1| (PREDICTED: uncharacterized protein LOC103431379 [Malus domestica])

HSP 1 Score: 480.7 bits (1236), Expect = 1.7e-132
Identity = 229/303 (75.58%), Postives = 249/303 (82.18%), Query Frame = 1 

Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQQGVKSQLDFLQQGL 60
           MSV+LTVMTFNLH+DQ  +S  SW+KRRDLCISVITSYSP ILCTQQGVKSQLD+LQQ L
Sbjct: 1   MSVSLTVMTFNLHEDQTEDSPYSWDKRRDLCISVITSYSPIILCTQQGVKSQLDYLQQCL 60

Query: 61  PGYGQFGVSRKGSRDTSDEHCTIFYDKEK------------------------------- 120
           PGY QFG+SRKG  DTSDEHCTIFYDKEK                               
Sbjct: 61  PGYDQFGISRKGPEDTSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSEVPCIA 120

Query: 121 TAHTFELKGIEPPGFSFQIVNTSMDELNPRARRRSALLTWQHIASLPPSLPVIYCGGFNT 180
           T  TF+LKG EPPGFSFQIVNT+MDE +PRARRRSALLTWQHIASLPP LPV+YCGGFNT
Sbjct: 121 TWVTFQLKGAEPPGFSFQIVNTNMDEFSPRARRRSALLTWQHIASLPPGLPVVYCGGFNT 180

Query: 181 EKESTTGRFLLGRSREKGAVGDMRDTWAIARARKNVSLIRTYHGFKGDKQGAFEFFKLIL 240
           +KESTTGRFLLGRSRE GAVGDMRD W  AR RKNVSLIRT+HGFKGDKQGA EF KL+ 
Sbjct: 181 QKESTTGRFLLGRSREHGAVGDMRDAWPNARVRKNVSLIRTFHGFKGDKQGALEFLKLVF 240

Query: 241 RALCLCWDRQTQDLHVDWILFRGRSLIPVVCEVVNDNIDGFYPSSHYPLFSEFMLPRTVR 273
           RALCLCWDRQTQDLHVDWILFRGRSL PV+CEVV+DNIDG+YPSSHYP+F+EFMLPRTVR
Sbjct: 241 RALCLCWDRQTQDLHVDWILFRGRSLSPVLCEVVSDNIDGYYPSSHYPIFAEFMLPRTVR 300

[Close]
BLAST of Cp4.1LG04g08820 vs. NCBI nr
Match: gi|1021473638|ref|XP_016200253.1| (PREDICTED: uncharacterized protein LOC107641270 [Arachis ipaensis])

HSP 1 Score: 478.4 bits (1230), Expect = 8.5e-132
Identity = 233/304 (76.64%), Postives = 250/304 (82.24%), Query Frame = 1 

Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQQGVKSQLDFLQQGL 60
           MSV+LTVMTFNLHDDQ  +S NSWEKRRDLCISVITSYSP ILCTQQGVK+QLDFLQQGL
Sbjct: 1   MSVSLTVMTFNLHDDQAEDSPNSWEKRRDLCISVITSYSPIILCTQQGVKTQLDFLQQGL 60

Query: 61  PGYGQFGVSRKGSRDTSDEHCTIFYDKEKT----AHTFELK-----------GIEP---- 120
           PGY QFG+SRKG +DT+DEHCTIFYDKEK       TF L            G E     
Sbjct: 61  PGYDQFGISRKGPQDTTDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSEVPCIA 120

Query: 121 ------------PGFSFQIVNTSMDELNPRARRRSALLTWQHIASLPPSLPVIYCGGFNT 180
                       PGFSFQIVNT+MD+ +PRARRRSALLTWQHIASLPPSLPV+YCGGFNT
Sbjct: 121 TWATFQLKGVEPPGFSFQIVNTNMDQFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNT 180

Query: 181 EKESTTGRFLLGRSREKGAVGDMRDTWAIARARKNVSLIRTYHGFKGDKQGAFEFFKLIL 240
           +KESTTGRFLLGRSRE G VGDMRD W  AR RKNVSLIRTYHGFKGDKQGA EF KLIL
Sbjct: 181 QKESTTGRFLLGRSREHGVVGDMRDAWPSARVRKNVSLIRTYHGFKGDKQGALEFLKLIL 240

Query: 241 RALCLCWDRQTQDLHVDWILFRGRSLIPVVCEVVNDNIDGFYPSSHYPLFSEFMLPRTVR 274
           RALCLCWDRQTQDLH+DWILFRGRSLIPV CEVVNDNIDG+YPSSH+P+F+EFMLPRTVR
Sbjct: 241 RALCLCWDRQTQDLHIDWILFRGRSLIPVSCEVVNDNIDGYYPSSHFPIFAEFMLPRTVR 300

[Close]
BLAST of Cp4.1LG04g08820 vs. NCBI nr
Match: gi|1012001775|ref|XP_015932931.1| (PREDICTED: uncharacterized protein LOC107459225 [Arachis duranensis])

HSP 1 Score: 475.3 bits (1222), Expect = 7.2e-131
Identity = 232/304 (76.32%), Postives = 249/304 (81.91%), Query Frame = 1 

Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQQGVKSQLDFLQQGL 60
           MSV+LTVMTFNLHDDQ  +S NSWEKRRDLCISVITSYSP ILCTQQGVK+QLDFLQQGL
Sbjct: 1   MSVSLTVMTFNLHDDQAEDSPNSWEKRRDLCISVITSYSPIILCTQQGVKTQLDFLQQGL 60

Query: 61  PGYGQFGVSRKGSRDTSDEHCTIFYDKEKT----AHTFELK-----------GIEP---- 120
           PGY QFG+SRKG +DT+DEHCTIFYDKEK       TF L            G E     
Sbjct: 61  PGYDQFGISRKGPQDTTDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSEVPCIA 120

Query: 121 ------------PGFSFQIVNTSMDELNPRARRRSALLTWQHIASLPPSLPVIYCGGFNT 180
                       PGFSFQIVNT+MD+ +PRARRRSALLTWQHIASLPPSLPV+YCGGFNT
Sbjct: 121 TWATFQLKGVEPPGFSFQIVNTNMDQFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNT 180

Query: 181 EKESTTGRFLLGRSREKGAVGDMRDTWAIARARKNVSLIRTYHGFKGDKQGAFEFFKLIL 240
           +KESTTGRFLLGRSRE G VGDMRD W  A  RKNVSLIRTYHGFKGDKQGA EF KLIL
Sbjct: 181 QKESTTGRFLLGRSREHGVVGDMRDAWPSACVRKNVSLIRTYHGFKGDKQGALEFLKLIL 240

Query: 241 RALCLCWDRQTQDLHVDWILFRGRSLIPVVCEVVNDNIDGFYPSSHYPLFSEFMLPRTVR 274
           RALCLCWDRQTQDLH+DWILFRGRSLIPV CEVVNDNIDG+YPSSH+P+F+EFMLPRTVR
Sbjct: 241 RALCLCWDRQTQDLHIDWILFRGRSLIPVSCEVVNDNIDGYYPSSHFPIFAEFMLPRTVR 300

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g08820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG04g08820 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0B0P3J4_GOSAR4.4e-13577.44Uncharacterized protein OS=Gossypium arboreum GN=F383_02575 PE=4 SV=1[more]
I1JGP9_SOYBN8.6e-13175.33Uncharacterized protein OS=Glycine max GN=GLYMA_02G204100 PE=4 SV=1[more]
B9IMD6_POPTR1.9e-13076.25Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s11590g PE=4 SV=2[more]
A0A164ZN17_DAUCA3.3e-13073.27Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_019393 PE=4 SV=1[more]
A0A0R0F973_SOYBN3.3e-13075.66Uncharacterized protein OS=Glycine max GN=GLYMA_17G073700 PE=4 SV=1[more]
BLAST of Cp4.1LG04g08820 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G30900.13.4e-11565.90 DNAse I-like superfamily protein[more]
BLAST of Cp4.1LG04g08820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|728841835|gb|KHG21278.1|6.3e-13577.44Uncharacterized protein F383_02575 [Gossypium arboreum][more]
gi|694354423|ref|XP_009358437.1|3.5e-13375.91PREDICTED: uncharacterized protein LOC103949067 [Pyrus x bretschneideri][more]
gi|658063656|ref|XP_008367748.1|1.7e-13275.58PREDICTED: uncharacterized protein LOC103431379 [Malus domestica][more]
gi|1021473638|ref|XP_016200253.1|8.5e-13276.64PREDICTED: uncharacterized protein LOC107641270 [Arachis ipaensis][more]
gi|1012001775|ref|XP_015932931.1|7.2e-13176.32PREDICTED: uncharacterized protein LOC107459225 [Arachis duranensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005135Endo/exonuclease/phosphatase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
cellular_component GO:0005575 cellular_component
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0004527 exonuclease activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g08820.1Cp4.1LG04g08820.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005135Endonuclease/exonuclease/phosphatasePFAMPF03372Exo_endo_phoscoord: 8..253
score: 2.
IPR005135Endonuclease/exonuclease/phosphataseunknownSSF56219DNase I-likecoord: 3..267
score: 6.91
NoneNo IPR availablePANTHERPTHR12121CARBON CATABOLITE REPRESSOR PROTEIN 4coord: 2..273
score: 1.1
NoneNo IPR availablePANTHERPTHR12121:SF36ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINcoord: 2..273
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g08820Cucsa.093400Cucumber (Gy14) v1cgycpeB0184
Cp4.1LG04g08820CmaCh10G004660Cucurbita maxima (Rimu)cmacpeB092
Cp4.1LG04g08820CmoCh10G004990Cucurbita moschata (Rifu)cmocpeB068
Cp4.1LG04g08820Cla018734Watermelon (97103) v1cpewmB679
Cp4.1LG04g08820Csa1G256710Cucumber (Chinese Long) v2cpecuB641
Cp4.1LG04g08820ClCG06G012410Watermelon (Charleston Gray)cpewcgB616
Cp4.1LG04g08820CSPI01G17700Wild cucumber (PI 183967)cpecpiB640
Cp4.1LG04g08820Lsi06G011550Bottle gourd (USVL1VR-Ls)cpelsiB567
Cp4.1LG04g08820CsaV3_1G028970Cucumber (Chinese Long) v3cpecucB0796
Cp4.1LG04g08820Bhi02G000686Wax gourdcpewgoB0896
Cp4.1LG04g08820CsGy1G017880Cucumber (Gy14) v2cgybcpeB109
Cp4.1LG04g08820Carg14086Silver-seed gourdcarcpeB0717
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG04g08820Cp4.1LG18g05600Cucurbita pepo (Zucchini)cpecpeB360
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g08820Cucurbita pepo (Zucchini)cpecpeB456
Cp4.1LG04g08820Cucurbita pepo (Zucchini)cpecpeB498
Cp4.1LG04g08820Cucumber (Gy14) v1cgycpeB0710
Cp4.1LG04g08820Cucurbita maxima (Rimu)cmacpeB059
Cp4.1LG04g08820Cucurbita maxima (Rimu)cmacpeB153
Cp4.1LG04g08820Cucurbita moschata (Rifu)cmocpeB033
Cp4.1LG04g08820Cucurbita moschata (Rifu)cmocpeB129
Cp4.1LG04g08820Wild cucumber (PI 183967)cpecpiB682
Cp4.1LG04g08820Cucumber (Chinese Long) v2cpecuB636
Cp4.1LG04g08820Cucumber (Chinese Long) v2cpecuB678
Cp4.1LG04g08820Bottle gourd (USVL1VR-Ls)cpelsiB565
Cp4.1LG04g08820Watermelon (Charleston Gray)cpewcgB614
Cp4.1LG04g08820Watermelon (97103) v1cpewmB659
Cp4.1LG04g08820Melon (DHL92) v3.5.1cpemeB621
Cp4.1LG04g08820Melon (DHL92) v3.5.1cpemeB643
Cp4.1LG04g08820Cucumber (Gy14) v2cgybcpeB558
Cp4.1LG04g08820Melon (DHL92) v3.6.1cpemedB734
Cp4.1LG04g08820Melon (DHL92) v3.6.1cpemedB767
Cp4.1LG04g08820Silver-seed gourdcarcpeB0186
Cp4.1LG04g08820Silver-seed gourdcarcpeB0905
Cp4.1LG04g08820Cucumber (Chinese Long) v3cpecucB0849
Cp4.1LG04g08820Wax gourdcpewgoB0877