Cp4.1LG04g08410 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g08410
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUbiquitin-conjugating enzyme
LocationCp4.1LG04 : 3070518 .. 3073621 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTATGCAACGATGTACTAGGAATAGATGTGGCATGCTGGCTGGAAAATGCGTGGAAATTTTTCTAGGGAACTTTGGGGTTTGTTTTAGCAATTGTTAATGCAATATTCTTCTTTATTTAGGAATGTCGATTTTGCTTCTTCCACGGTGTTATTGTCATTCATAACTGATTTGAATGTTGTTAGACCTCAAGTCTTTGCTGTTTCGATTTACGGTTTTTGAAATGGCAACCGATGATACATTTTTGTAATCTGCAGTGTTGTAATTTGATTTCAGTTCATTCGTTGTGTTTTTATATGGTACAGTTGAATTTATTGTTAATAACCACCCTCTACCGTCTTTGCTATTCAAATTTACTGCCCTTGAAGTGGCAGTTAAGAAGAAAAAAACGTTTTATCATCTGCAGTCTTATAATTTGATTGAGATTAGTGTAAATATTTAGTTGTTGGGTCTTGATATATATATATAGGAATTCTACTACTCAATTGGCTGAATTTATTATTCTCAATTTTATCCAGTACCCATGTCTTCTACTTTTTGACAAAAAGCTTTTTGGAATACTTTGATCTGGCAGTGCTCCAAATTTGATATCCTATTTATACAGTACCCTGCAGGAACGATGATTAAGCTTTTTAAAGTGAAGGAAAAGCAGAGAGAGATCGCAAAAAACGCCGATGGAAAACCTCCTGTCAAGAAGCAATCTGCAGGAGAATTGCGTCTTCAAAAAGGTAGAGCCTAGTTACTTCATTTTCATTTTCATCTTCTGTGAACAACTTTTGCCTTGAAGCCATAAGTTCTGTGGTTTGTAGATTGTTAATGTTAGTTATGCTTTTGCTAGAGCTATTTTTCGGAAAACCTGTTTGGTTTGTTGTATTTATTGCATCCATAGTCTTCACTAATGTTCGGATCAGGTTTGTTTTATGGATTTTCTTAAATTTTAAATATGATATTGCATGCAAGGCCATGAAGACATAGATCATCTTTTGGTCCAGTCCCAGCTATCCTCATTCCTGGTGAAACTTCTATTTTAAATCTCCTATCAGTCTAGAATTTACAATTGTCAGCTGAATGAGTTTAGAGATATCCTTGAGCGGGCCGTATCTTGTGTCATAATGCAGTCAAAGCTCTGGTTTCTTCATAGCTTCATCTCGACGTACAATCTAGAAGTTTTTTATTTATCATTATTATTATTATCCTTTTTTTTTTTTTAACTATTTTAGTTTAGTAGTTTATGTATTAAAGAAAACTGGAATATCTTTTTTAACCTATGTGGCTTTGAGCGTAAGATGCTTTTTATCTTCTTGAGTTTTGCTTTCTTTCCTTAGTGATATGTCTCTTATCCCATGTATGTAGATATAAATATGATATAAACATTAATCAATTTTCCATTCACTACGGAATAATATGGCTATGTGCTTGTGTTGTTTTAATTGTAGATATCAGTGAACTGAACCTGCCAAAAACATGTAGTATATCCTTTCCTAATGGCAAGGATGAGTTGATGAACTTTGAGGTCACTATTCATCCTGATGAAGGATATTATCTGTAAGTAGTCTCTTGAAAATATTGTTTTTCAATTTAGTTGCAATATATGCTTCTTAAGTTGAAATGTACGTGTAAGACATCACACTTCCCGAATCTCAGACATGGATGGATGTCATATCATTTCCATCAATGAGGTATCAATAGAACTTTGCATTGGACTTGGTTCAAATGCATTTAAGCTGTGTATTGAAAAATTGCTTTTTTCAGGGTTTAATCATCATTTCTTTGTTAAGATATTTGTTCCTCCCTTCCACCCAGAGTAGCTGTTCCCTTGTAATGAACATTAAAAGTCCCTTGATTTTGTGTTAACAGAGGTGGTACATTTCTCTTCTCTTTCCAAGTTTCCCCTGTCTACCCTCACGAGCCACCAAAAGTGAAGTGCAAGACAAAGGTAACTATGCTGATCTTGTTCATTTACTTTTGTGTTTTTTAATTATTCTGAAAGTAGGCTTATAGATAACATGTGTGACTTGCAGGTGTATCATCCTAATATCGACTTGGAAGGAAACGTTTGTCTCAATATTTTAAGAGAGGACTGGAAGCCCGTTCTGAATATCAACACTATAATATACGGATTATTTCATCTTTTCACGGTATTTATGATTGTACTAATTATATGCCTTCAAAATTAGGCTTAAAATCTATTAAAGCATTCAATTTTCGTACTTATTTGTTTTAGTCCCTAAGTTTTCAATTGCTTTGTTTTAATCCTTACACGTCTTCGATCGTTTTGTTCTAATTCTGTACTTTGCATTAATTATGTCCAAGAAAGTGAACTTTTTTTGGAACCTAATGTGAAACTCGCTGCTTCAAACATTTATCTATGTAAATGTTTACTCATAAGACTAAAATGGGTTTTATAGGAAGTTTAGGAATTGAAATAAAATATTACCAAAATGGAATGAGAACAAGTTCAAAGAACAAAATAAATTTGAACCTTGAAGTTGCTAACTTTTTATTTTTTCGATTTTTGCAGCAACCAAATCATGAAGACCCCCTCAACCACGATGCCGCTGCTGTTTTGAGGGATAACCCAAAGATGTTCGAATCCAATGTGCGAAGAGCCATGGCTGGGGGTTACGTGGGGCACACTTTCTTCACACGTTGCATGTAGATTCTACATGAATTGTAAAGCACCAGATACATTATTCGAAAGCACGGACTCGGCAAGGTTGTCGAACTTCTGTGGTAAGACGACGTGTTTAGAGGACTTTCTGATCATCATCGACGCAGCATGAAGTCGTTAGTGATGCAGGTGGAACTTTGTTGTGTGTTTGCAGTATTGGTTTCAAATGGAAGTTGGACTGGGAACTGAAACTCTTATCTGTGTATGTATTTCCTCTAATTTATGTTTAAAGACAGATTGCTCGAAGTATAAGGTATGTTTTTGGAGCCTCCCTTCTTTTTCTTTATCAGAGTCTCTACAACTGTGGATGTAAATTTACTGAACGGAATCACTATGATTTATTTCCTTATATATTTCAAGTTTGTAAAACAAATCTCTGTTAGTTTCACTGTTTTTTTGTCATCATCACGAGATTGGAAAGCTTTTATCAT

mRNA sequence

ATGGCTATGCAACGATGTACTAGGAATAGATGTGGCATGCTGGCTGGAAAATGCGTGGAAATTTTTCTAGGGAACTTTGGGTGCTCCAAATTTGATATCCTATTTATACAGTACCCTGCAGGAACGATGATTAAGCTTTTTAAAGTGAAGGAAAAGCAGAGAGAGATCGCAAAAAACGCCGATGGAAAACCTCCTGTCAAGAAGCAATCTGCAGGAGAATTGCGTCTTCAAAAAGATATCAGTGAACTGAACCTGCCAAAAACATGTAGTATATCCTTTCCTAATGGCAAGGATGAGTTGATGAACTTTGAGGTCACTATTCATCCTGATGAAGGATATTATCTAGGTGGTACATTTCTCTTCTCTTTCCAAGTTTCCCCTGTCTACCCTCACGAGCCACCAAAAGTGAAGTGCAAGACAAAGGTGTATCATCCTAATATCGACTTGGAAGGAAACGTTTGTCTCAATATTTTAAGAGAGGACTGGAAGCCCGTTCTGAATATCAACACTATAATATACGGATTATTTCATCTTTTCACGCAACCAAATCATGAAGACCCCCTCAACCACGATGCCGCTGCTGTTTTGAGGGATAACCCAAAGATGTTCGAATCCAATGTGCGAAGAGCCATGGCTGGGGGTTACGTGGGGCACACTTTCTTCACACGTTGCATGTAGATTCTACATGAATTGTAAAGCACCAGATACATTATTCGAAAGCACGGACTCGGCAAGGTTGTCGAACTTCTGTGTATTGGTTTCAAATGGAAGTTGGACTGGGAACTGAAACTCTTATCTGTGTATGTATTTCCTCTAATTTATGTTTAAAGACAGATTGCTCGAAGTATAAGGTATGTTTTTGGAGCCTCCCTTCTTTTTCTTTATCAGAGTCTCTACAACTGTGGATGTAAATTTACTGAACGGAATCACTATGATTTATTTCCTTATATATTTCAAGTTTGTAAAACAAATCTCTGTTAGTTTCACTGTTTTTTTGTCATCATCACGAGATTGGAAAGCTTTTATCAT

Coding sequence (CDS)

ATGGCTATGCAACGATGTACTAGGAATAGATGTGGCATGCTGGCTGGAAAATGCGTGGAAATTTTTCTAGGGAACTTTGGGTGCTCCAAATTTGATATCCTATTTATACAGTACCCTGCAGGAACGATGATTAAGCTTTTTAAAGTGAAGGAAAAGCAGAGAGAGATCGCAAAAAACGCCGATGGAAAACCTCCTGTCAAGAAGCAATCTGCAGGAGAATTGCGTCTTCAAAAAGATATCAGTGAACTGAACCTGCCAAAAACATGTAGTATATCCTTTCCTAATGGCAAGGATGAGTTGATGAACTTTGAGGTCACTATTCATCCTGATGAAGGATATTATCTAGGTGGTACATTTCTCTTCTCTTTCCAAGTTTCCCCTGTCTACCCTCACGAGCCACCAAAAGTGAAGTGCAAGACAAAGGTGTATCATCCTAATATCGACTTGGAAGGAAACGTTTGTCTCAATATTTTAAGAGAGGACTGGAAGCCCGTTCTGAATATCAACACTATAATATACGGATTATTTCATCTTTTCACGCAACCAAATCATGAAGACCCCCTCAACCACGATGCCGCTGCTGTTTTGAGGGATAACCCAAAGATGTTCGAATCCAATGTGCGAAGAGCCATGGCTGGGGGTTACGTGGGGCACACTTTCTTCACACGTTGCATGTAG

Protein sequence

MAMQRCTRNRCGMLAGKCVEIFLGNFGCSKFDILFIQYPAGTMIKLFKVKEKQREIAKNADGKPPVKKQSAGELRLQKDISELNLPKTCSISFPNGKDELMNFEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGHTFFTRCM
Homology
[Close]
BLAST of Cp4.1LG04g08410 vs. Swiss-Prot
Match: RCE1_ARATH (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 4.7e-88
Identity = 155/184 (84.24%), Postives = 167/184 (90.76%), Query Frame = 1 

Query: 43  MIKLFKVKEKQREIAKNAD-GKPPVKKQSAGELRLQKDISELNLPKTCSISFPNGKDELM 102
           MI LFKVKEKQRE A+NA  G   VKKQSAGELRL KDISELNLP +CSISFPNGKD+LM
Sbjct: 1   MIGLFKVKEKQREQAQNATRGGASVKKQSAGELRLHKDISELNLPSSCSISFPNGKDDLM 60

Query: 103 NFEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILRED 162
           NFEV+I PD+GYY  GTF+F+FQVSPVYPHE PKVKCKTKVYHPNIDLEGNVCLNILRED
Sbjct: 61  NFEVSIKPDDGYYHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED 120

Query: 163 WKPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGHTFF 222
           WKPVLNINT+IYGLFHLFT+PN EDPLNHDAAAVLRDNPK+FE+NVRRAM GGYVG TFF
Sbjct: 121 WKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRRAMTGGYVGQTFF 180

Query: 223 TRCM 226
            RC+
Sbjct: 181 PRCI 184

[Close]
BLAST of Cp4.1LG04g08410 vs. Swiss-Prot
Match: UB12L_ARATH (Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana GN=RCE2 PE=2 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 2.4e-84
Identity = 151/185 (81.62%), Postives = 162/185 (87.57%), Query Frame = 1 

Query: 43  MIKLFKVKEKQREIAK--NADGKPPVKKQSAGELRLQKDISELNLPKTCSISFPNGKDEL 102
           MI LFKVKEKQRE ++  N  G   VKKQSAGELRL KDISELNLPK+C ISFPNGK++L
Sbjct: 1   MIGLFKVKEKQREESQSNNGRGASTVKKQSAGELRLHKDISELNLPKSCKISFPNGKNDL 60

Query: 103 MNFEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILRE 162
           MNFEVTI PDEGYYL G F+FSFQVS +YPHE PKVKCKTKVYHPNIDLEGNVCLNILRE
Sbjct: 61  MNFEVTIKPDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE 120

Query: 163 DWKPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGHTF 222
           DWKPVLNINT+IYGLFHLFT+PN+EDPLNH+AAAVLRDNPK FE NVRRAM GG VG T 
Sbjct: 121 DWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVRRAMMGGQVGQTS 180

Query: 223 FTRCM 226
           F RCM
Sbjct: 181 FPRCM 185

[Close]
BLAST of Cp4.1LG04g08410 vs. Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 9.4e-65
Identity = 115/183 (62.84%), Postives = 146/183 (79.78%), Query Frame = 1 

Query: 43  MIKLFKVKEKQREIAKNADGKPPVKKQSAGELRLQKDISELNLPKTCSISFPNGKDELMN 102
           MIKLF +K++++E       K   KK SA +LR+QKDI+ELNLPKTC I F +  D+L+N
Sbjct: 1   MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDINELNLPKTCEIEF-SDHDDLLN 60

Query: 103 FEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 162
           F++ I PDEG+Y GG F+FSF+V   YPH+PPKVKC+T VYHPNIDLEGNVCLNILREDW
Sbjct: 61  FKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDW 120

Query: 163 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGHTFFT 222
           KPVL IN+IIYGL +LF +PN EDPLN +AA VL++N ++FE NV+R+M GGY+G T+F 
Sbjct: 121 KPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFE 180

Query: 223 RCM 226
           RC+
Sbjct: 181 RCL 182

[Close]
BLAST of Cp4.1LG04g08410 vs. Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 9.4e-65
Identity = 115/183 (62.84%), Postives = 146/183 (79.78%), Query Frame = 1 

Query: 43  MIKLFKVKEKQREIAKNADGKPPVKKQSAGELRLQKDISELNLPKTCSISFPNGKDELMN 102
           MIKLF +K++++E       K   KK SA +LR+QKDI+ELNLPKTC I F +  D+L+N
Sbjct: 1   MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDITELNLPKTCEIEF-SDHDDLLN 60

Query: 103 FEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 162
           F++ I PDEG+Y GG F+FSF+V   YPH+PPKVKC+T VYHPNIDLEGNVCLNILREDW
Sbjct: 61  FKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDW 120

Query: 163 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGHTFFT 222
           KPVL IN+IIYGL +LF +PN EDPLN +AA VL++N ++FE NV+R+M GGY+G T+F 
Sbjct: 121 KPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFE 180

Query: 223 RCM 226
           RC+
Sbjct: 181 RCL 182

[Close]
BLAST of Cp4.1LG04g08410 vs. Swiss-Prot
Match: UBC12_BOVIN (NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.6e-64
Identity = 115/183 (62.84%), Postives = 146/183 (79.78%), Query Frame = 1 

Query: 43  MIKLFKVKEKQREIAKNADGKPPVKKQSAGELRLQKDISELNLPKTCSISFPNGKDELMN 102
           MIKLF +K++++E       K   KK SA +LR+QKDI+ELNLPKTC ISF +  D+L+N
Sbjct: 1   MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDINELNLPKTCDISF-SDPDDLLN 60

Query: 103 FEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 162
           F++ I PDEG+Y  G F+FSF+V   YPH+PPKVKC+T VYHPNIDLEGNVCLNILREDW
Sbjct: 61  FKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDW 120

Query: 163 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGHTFFT 222
           KPVL IN+IIYGL +LF +PN EDPLN +AA VL++N ++FE NV+R+M GGY+G T+F 
Sbjct: 121 KPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFE 180

Query: 223 RCM 226
           RC+
Sbjct: 181 RCL 182

[Close]
BLAST of Cp4.1LG04g08410 vs. TrEMBL
Match: A0A0A0K481_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G253730 PE=3 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 6.3e-100
Identity = 175/183 (95.63%), Postives = 179/183 (97.81%), Query Frame = 1 

Query: 43  MIKLFKVKEKQREIAKNADGKPPVKKQSAGELRLQKDISELNLPKTCSISFPNGKDELMN 102
           MIKLFKVKEKQREIA NA+G PPVKKQSAGELRLQKDISELNLPKTC+ISFPNGKD+LMN
Sbjct: 1   MIKLFKVKEKQREIAANANGVPPVKKQSAGELRLQKDISELNLPKTCNISFPNGKDDLMN 60

Query: 103 FEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 162
           FEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 163 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGHTFFT 222
           KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFE NVRRAMAGGYVG T+FT
Sbjct: 121 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFEFNVRRAMAGGYVGQTYFT 180

Query: 223 RCM 226
           RCM
Sbjct: 181 RCM 183

[Close]
BLAST of Cp4.1LG04g08410 vs. TrEMBL
Match: A0A061E1P9_THECC (RUB1 conjugating enzyme 1 isoform 1 OS=Theobroma cacao GN=TCM_007289 PE=3 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 7.7e-98
Identity = 172/183 (93.99%), Postives = 178/183 (97.27%), Query Frame = 1 

Query: 43  MIKLFKVKEKQREIAKNADGKPPVKKQSAGELRLQKDISELNLPKTCSISFPNGKDELMN 102
           MIKLFKVKEKQREIA+NA+GK PVKKQSAGELRL KDISELNLPKTCSISFPNGKD+LMN
Sbjct: 1   MIKLFKVKEKQREIAENANGKAPVKKQSAGELRLHKDISELNLPKTCSISFPNGKDDLMN 60

Query: 103 FEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 162
           FEVTI PDEGYYLGGTFLFSFQVSP+YPHE PKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIRPDEGYYLGGTFLFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 163 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGHTFFT 222
           KPVLNINTIIYGLFHLFTQPN+EDPLNHDAAAVLRDNPK+FESNVRRAMAGGYVG TFFT
Sbjct: 121 KPVLNINTIIYGLFHLFTQPNYEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFT 180

Query: 223 RCM 226
           RCM
Sbjct: 181 RCM 183

[Close]
BLAST of Cp4.1LG04g08410 vs. TrEMBL
Match: A0A022RZJ4_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014626mg PE=3 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 1.1e-96
Identity = 166/183 (90.71%), Postives = 179/183 (97.81%), Query Frame = 1 

Query: 43  MIKLFKVKEKQREIAKNADGKPPVKKQSAGELRLQKDISELNLPKTCSISFPNGKDELMN 102
           MIKLFKVKEKQRE+A++A+GKPPVKKQSAGELRLQKDISELNLPKTC+I+FPNGKDELMN
Sbjct: 1   MIKLFKVKEKQRELAESANGKPPVKKQSAGELRLQKDISELNLPKTCNIAFPNGKDELMN 60

Query: 103 FEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 162
           FEVTI PDEGYYLGGTFLFSFQ+SP+YPHE PKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIRPDEGYYLGGTFLFSFQISPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 163 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGHTFFT 222
           KPVLNINTIIYGL+HLFT+PNHEDPLNH+AAAVLRDNPKMFESNVRRAM+GGYVG TFF 
Sbjct: 121 KPVLNINTIIYGLYHLFTEPNHEDPLNHEAAAVLRDNPKMFESNVRRAMSGGYVGQTFFA 180

Query: 223 RCM 226
           RC+
Sbjct: 181 RCL 183

[Close]
BLAST of Cp4.1LG04g08410 vs. TrEMBL
Match: A5AHT5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034608 PE=3 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 5.5e-96
Identity = 169/183 (92.35%), Postives = 176/183 (96.17%), Query Frame = 1 

Query: 43  MIKLFKVKEKQREIAKNADGKPPVKKQSAGELRLQKDISELNLPKTCSISFPNGKDELMN 102
           MIKLFKVKEKQREIA+NA+GK PVKKQSAGELRL KDISELNLPKTC ISFPNGKD+LM+
Sbjct: 1   MIKLFKVKEKQREIAENANGKAPVKKQSAGELRLHKDISELNLPKTCCISFPNGKDDLMS 60

Query: 103 FEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 162
           FEVTI PDEGYYLGGTF+FSFQVSP+YPHE PKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIRPDEGYYLGGTFVFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 163 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGHTFFT 222
           KPVLNINTIIYGLFHLFTQPN+EDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVG TFF 
Sbjct: 121 KPVLNINTIIYGLFHLFTQPNYEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGQTFFP 180

Query: 223 RCM 226
           RCM
Sbjct: 181 RCM 183

[Close]
BLAST of Cp4.1LG04g08410 vs. TrEMBL
Match: F6HQJ9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g02110 PE=3 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 5.5e-96
Identity = 169/183 (92.35%), Postives = 176/183 (96.17%), Query Frame = 1 

Query: 43  MIKLFKVKEKQREIAKNADGKPPVKKQSAGELRLQKDISELNLPKTCSISFPNGKDELMN 102
           MIKLFKVKEKQREIA+NA+GK PVKKQSAGELRL KDISELNLPKTC ISFPNGKD+LM+
Sbjct: 33  MIKLFKVKEKQREIAENANGKAPVKKQSAGELRLHKDISELNLPKTCCISFPNGKDDLMS 92

Query: 103 FEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 162
           FEVTI PDEGYYLGGTF+FSFQVSP+YPHE PKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 93  FEVTIRPDEGYYLGGTFVFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 152

Query: 163 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGHTFFT 222
           KPVLNINTIIYGLFHLFTQPN+EDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVG TFF 
Sbjct: 153 KPVLNINTIIYGLFHLFTQPNYEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGQTFFP 212

Query: 223 RCM 226
           RCM
Sbjct: 213 RCM 215

[Close]
BLAST of Cp4.1LG04g08410 vs. TAIR10
Match: AT4G36800.1 (AT4G36800.1 RUB1 conjugating enzyme 1)

HSP 1 Score: 325.5 bits (833), Expect = 2.6e-89
Identity = 155/184 (84.24%), Postives = 167/184 (90.76%), Query Frame = 1 

Query: 43  MIKLFKVKEKQREIAKNAD-GKPPVKKQSAGELRLQKDISELNLPKTCSISFPNGKDELM 102
           MI LFKVKEKQRE A+NA  G   VKKQSAGELRL KDISELNLP +CSISFPNGKD+LM
Sbjct: 1   MIGLFKVKEKQREQAQNATRGGASVKKQSAGELRLHKDISELNLPSSCSISFPNGKDDLM 60

Query: 103 NFEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILRED 162
           NFEV+I PD+GYY  GTF+F+FQVSPVYPHE PKVKCKTKVYHPNIDLEGNVCLNILRED
Sbjct: 61  NFEVSIKPDDGYYHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED 120

Query: 163 WKPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGHTFF 222
           WKPVLNINT+IYGLFHLFT+PN EDPLNHDAAAVLRDNPK+FE+NVRRAM GGYVG TFF
Sbjct: 121 WKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRRAMTGGYVGQTFF 180

Query: 223 TRCM 226
            RC+
Sbjct: 181 PRCI 184

[Close]
BLAST of Cp4.1LG04g08410 vs. TAIR10
Match: AT2G18600.1 (AT2G18600.1 Ubiquitin-conjugating enzyme family protein)

HSP 1 Score: 313.2 bits (801), Expect = 1.3e-85
Identity = 151/185 (81.62%), Postives = 162/185 (87.57%), Query Frame = 1 

Query: 43  MIKLFKVKEKQREIAK--NADGKPPVKKQSAGELRLQKDISELNLPKTCSISFPNGKDEL 102
           MI LFKVKEKQRE ++  N  G   VKKQSAGELRL KDISELNLPK+C ISFPNGK++L
Sbjct: 1   MIGLFKVKEKQREESQSNNGRGASTVKKQSAGELRLHKDISELNLPKSCKISFPNGKNDL 60

Query: 103 MNFEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILRE 162
           MNFEVTI PDEGYYL G F+FSFQVS +YPHE PKVKCKTKVYHPNIDLEGNVCLNILRE
Sbjct: 61  MNFEVTIKPDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE 120

Query: 163 DWKPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGHTF 222
           DWKPVLNINT+IYGLFHLFT+PN+EDPLNH+AAAVLRDNPK FE NVRRAM GG VG T 
Sbjct: 121 DWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVRRAMMGGQVGQTS 180

Query: 223 FTRCM 226
           F RCM
Sbjct: 181 FPRCM 185

[Close]
BLAST of Cp4.1LG04g08410 vs. TAIR10
Match: AT3G08690.1 (AT3G08690.1 ubiquitin-conjugating enzyme 11)

HSP 1 Score: 108.6 bits (270), Expect = 5.0e-24
Identity = 51/135 (37.78%), Postives = 78/135 (57.78%), Query Frame = 1 

Query: 75  RLQKDISELNLPKTCSISFPNGKDELMNFEVTIH-PDEGYYLGGTFLFSFQVSPVYPHEP 134
           R+ K++ +L      + S     +++ +++ TI  P E  Y GG FL S    P YP +P
Sbjct: 5   RILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKP 64

Query: 135 PKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNHEDPLNHDAA 194
           PKV  KTKVYHPNI+  G++CL+IL+E W P L I+ ++  +  L T PN +DPL  + A
Sbjct: 65  PKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA 124

Query: 195 AVLRDNPKMFESNVR 209
            + + +   +ES  R
Sbjct: 125 HMYKTDRSKYESTAR 139

[Close]
BLAST of Cp4.1LG04g08410 vs. TAIR10
Match: AT2G16740.1 (AT2G16740.1 ubiquitin-conjugating enzyme 29)

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-23
Identity = 53/137 (38.69%), Postives = 83/137 (60.58%), Query Frame = 1 

Query: 75  RLQKDISELNL--PKTCSISFPNGKDELMNFEVTIH-PDEGYYLGGTFLFSFQVSPVYPH 134
           R+ K++ EL    P +CS   P G+D + +++ TI  P+E  Y GG FL +    P YP 
Sbjct: 5   RILKELKELQRDPPVSCSAG-PTGED-MFHWQATIMGPNESPYSGGVFLVNIHFPPDYPF 64

Query: 135 EPPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNHEDPLNHD 194
           +PPKV  +TKV+HPNI+  GN+CL+IL++ W P L I+ ++  +  L T PN +DPL  +
Sbjct: 65  KPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPE 124

Query: 195 AAAVLRDNPKMFESNVR 209
            A + + +   +E+  R
Sbjct: 125 IAHIYKTDKTKYEAMAR 139

[Close]
BLAST of Cp4.1LG04g08410 vs. TAIR10
Match: AT5G53300.1 (AT5G53300.1 ubiquitin-conjugating enzyme 10)

HSP 1 Score: 106.3 bits (264), Expect = 2.5e-23
Identity = 49/135 (36.30%), Postives = 78/135 (57.78%), Query Frame = 1 

Query: 75  RLQKDISELNLPKTCSISFPNGKDELMNFEVTIH-PDEGYYLGGTFLFSFQVSPVYPHEP 134
           R+ K++ +L      S S     +++ +++ TI  P E  Y GG FL +    P YP +P
Sbjct: 5   RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKP 64

Query: 135 PKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNHEDPLNHDAA 194
           PKV  +TKV+HPNI+  G++CL+IL+E W P L I+ ++  +  L T PN +DPL  + A
Sbjct: 65  PKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA 124

Query: 195 AVLRDNPKMFESNVR 209
            + + +   +ES  R
Sbjct: 125 HMYKTDKNKYESTAR 139

[Close]
BLAST of Cp4.1LG04g08410 vs. NCBI nr
Match: gi|449461136|ref|XP_004148299.1| (PREDICTED: NEDD8-conjugating enzyme Ubc12 [Cucumis sativus])

HSP 1 Score: 371.7 bits (953), Expect = 9.0e-100
Identity = 175/183 (95.63%), Postives = 179/183 (97.81%), Query Frame = 1 

Query: 43  MIKLFKVKEKQREIAKNADGKPPVKKQSAGELRLQKDISELNLPKTCSISFPNGKDELMN 102
           MIKLFKVKEKQREIA NA+G PPVKKQSAGELRLQKDISELNLPKTC+ISFPNGKD+LMN
Sbjct: 1   MIKLFKVKEKQREIAANANGVPPVKKQSAGELRLQKDISELNLPKTCNISFPNGKDDLMN 60

Query: 103 FEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 162
           FEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 163 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGHTFFT 222
           KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFE NVRRAMAGGYVG T+FT
Sbjct: 121 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFEFNVRRAMAGGYVGQTYFT 180

Query: 223 RCM 226
           RCM
Sbjct: 181 RCM 183

[Close]
BLAST of Cp4.1LG04g08410 vs. NCBI nr
Match: gi|659092421|ref|XP_008447053.1| (PREDICTED: NEDD8-conjugating enzyme Ubc12-like [Cucumis melo])

HSP 1 Score: 371.7 bits (953), Expect = 9.0e-100
Identity = 175/183 (95.63%), Postives = 179/183 (97.81%), Query Frame = 1 

Query: 43  MIKLFKVKEKQREIAKNADGKPPVKKQSAGELRLQKDISELNLPKTCSISFPNGKDELMN 102
           MIKLFKVKEKQREIA NA+G PPVKKQ+AGELRLQKDISELNLPKTCSISFPNGKD+LMN
Sbjct: 1   MIKLFKVKEKQREIAANANGVPPVKKQTAGELRLQKDISELNLPKTCSISFPNGKDDLMN 60

Query: 103 FEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 162
           FEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 163 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGHTFFT 222
           KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFE NVRRAMAGGYVG T+FT
Sbjct: 121 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFEFNVRRAMAGGYVGQTYFT 180

Query: 223 RCM 226
           RCM
Sbjct: 181 RCM 183

[Close]
BLAST of Cp4.1LG04g08410 vs. NCBI nr
Match: gi|590687671|ref|XP_007042730.1| (RUB1 conjugating enzyme 1 isoform 1 [Theobroma cacao])

HSP 1 Score: 364.8 bits (935), Expect = 1.1e-97
Identity = 172/183 (93.99%), Postives = 178/183 (97.27%), Query Frame = 1 

Query: 43  MIKLFKVKEKQREIAKNADGKPPVKKQSAGELRLQKDISELNLPKTCSISFPNGKDELMN 102
           MIKLFKVKEKQREIA+NA+GK PVKKQSAGELRL KDISELNLPKTCSISFPNGKD+LMN
Sbjct: 1   MIKLFKVKEKQREIAENANGKAPVKKQSAGELRLHKDISELNLPKTCSISFPNGKDDLMN 60

Query: 103 FEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 162
           FEVTI PDEGYYLGGTFLFSFQVSP+YPHE PKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIRPDEGYYLGGTFLFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 163 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGHTFFT 222
           KPVLNINTIIYGLFHLFTQPN+EDPLNHDAAAVLRDNPK+FESNVRRAMAGGYVG TFFT
Sbjct: 121 KPVLNINTIIYGLFHLFTQPNYEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFT 180

Query: 223 RCM 226
           RCM
Sbjct: 181 RCM 183

[Close]
BLAST of Cp4.1LG04g08410 vs. NCBI nr
Match: gi|848853882|ref|XP_012845722.1| (PREDICTED: NEDD8-conjugating enzyme Ubc12-like [Erythranthe guttata])

HSP 1 Score: 360.9 bits (925), Expect = 1.6e-96
Identity = 166/183 (90.71%), Postives = 179/183 (97.81%), Query Frame = 1 

Query: 43  MIKLFKVKEKQREIAKNADGKPPVKKQSAGELRLQKDISELNLPKTCSISFPNGKDELMN 102
           MIKLFKVKEKQRE+A++A+GKPPVKKQSAGELRLQKDISELNLPKTC+I+FPNGKDELMN
Sbjct: 1   MIKLFKVKEKQRELAESANGKPPVKKQSAGELRLQKDISELNLPKTCNIAFPNGKDELMN 60

Query: 103 FEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 162
           FEVTI PDEGYYLGGTFLFSFQ+SP+YPHE PKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIRPDEGYYLGGTFLFSFQISPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 163 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGHTFFT 222
           KPVLNINTIIYGL+HLFT+PNHEDPLNH+AAAVLRDNPKMFESNVRRAM+GGYVG TFF 
Sbjct: 121 KPVLNINTIIYGLYHLFTEPNHEDPLNHEAAAVLRDNPKMFESNVRRAMSGGYVGQTFFA 180

Query: 223 RCM 226
           RC+
Sbjct: 181 RCL 183

[Close]
BLAST of Cp4.1LG04g08410 vs. NCBI nr
Match: gi|359475268|ref|XP_003631628.1| (PREDICTED: NEDD8-conjugating enzyme Ubc12 [Vitis vinifera])

HSP 1 Score: 358.6 bits (919), Expect = 7.9e-96
Identity = 169/183 (92.35%), Postives = 176/183 (96.17%), Query Frame = 1 

Query: 43  MIKLFKVKEKQREIAKNADGKPPVKKQSAGELRLQKDISELNLPKTCSISFPNGKDELMN 102
           MIKLFKVKEKQREIA+NA+GK PVKKQSAGELRL KDISELNLPKTC ISFPNGKD+LM+
Sbjct: 1   MIKLFKVKEKQREIAENANGKAPVKKQSAGELRLHKDISELNLPKTCCISFPNGKDDLMS 60

Query: 103 FEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 162
           FEVTI PDEGYYLGGTF+FSFQVSP+YPHE PKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIRPDEGYYLGGTFVFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 163 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGHTFFT 222
           KPVLNINTIIYGLFHLFTQPN+EDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVG TFF 
Sbjct: 121 KPVLNINTIIYGLFHLFTQPNYEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGQTFFP 180

Query: 223 RCM 226
           RCM
Sbjct: 181 RCM 183

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g08410 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RCE1_ARATH4.7e-8884.24NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1[more]
UB12L_ARATH2.4e-8481.62Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana GN=RCE2 PE=... [more]
UBC12_XENTR9.4e-6562.84NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1[more]
UBC12_XENLA9.4e-6562.84NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1[more]
UBC12_BOVIN1.6e-6462.84NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1[more]
BLAST of Cp4.1LG04g08410 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K481_CUCSA6.3e-10095.63Uncharacterized protein OS=Cucumis sativus GN=Csa_7G253730 PE=3 SV=1[more]
A0A061E1P9_THECC7.7e-9893.99RUB1 conjugating enzyme 1 isoform 1 OS=Theobroma cacao GN=TCM_007289 PE=3 SV=1[more]
A0A022RZJ4_ERYGU1.1e-9690.71Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014626mg PE=3 SV=1[more]
A5AHT5_VITVI5.5e-9692.35Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034608 PE=3 SV=1[more]
F6HQJ9_VITVI5.5e-9692.35Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g02110 PE=3 SV=... [more]
BLAST of Cp4.1LG04g08410 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G36800.12.6e-8984.24 RUB1 conjugating enzyme 1[more]
AT2G18600.11.3e-8581.62 Ubiquitin-conjugating enzyme family protein[more]
AT3G08690.15.0e-2437.78 ubiquitin-conjugating enzyme 11[more]
AT2G16740.11.1e-2338.69 ubiquitin-conjugating enzyme 29[more]
AT5G53300.12.5e-2336.30 ubiquitin-conjugating enzyme 10[more]
BLAST of Cp4.1LG04g08410 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449461136|ref|XP_004148299.1|9.0e-10095.63PREDICTED: NEDD8-conjugating enzyme Ubc12 [Cucumis sativus][more]
gi|659092421|ref|XP_008447053.1|9.0e-10095.63PREDICTED: NEDD8-conjugating enzyme Ubc12-like [Cucumis melo][more]
gi|590687671|ref|XP_007042730.1|1.1e-9793.99RUB1 conjugating enzyme 1 isoform 1 [Theobroma cacao][more]
gi|848853882|ref|XP_012845722.1|1.6e-9690.71PREDICTED: NEDD8-conjugating enzyme Ubc12-like [Erythranthe guttata][more]
gi|359475268|ref|XP_003631628.1|7.9e-9692.35PREDICTED: NEDD8-conjugating enzyme Ubc12 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023313UBQ-conjugating_AS
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g08410.1Cp4.1LG04g08410.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 75..210
score: 1.1
IPR000608Ubiquitin-conjugating enzyme E2PROFILEPS50127UBIQUITIN_CONJUGAT_2coord: 74..205
score: 28
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 70..211
score: 5.1
IPR016135Ubiquitin-conjugating enzyme/RWD-likeunknownSSF54495UBC-likecoord: 64..220
score: 1.98
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 143..158
scor
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 51..225
score: 3.6E
NoneNo IPR availablePANTHERPTHR24067:SF123NEDD8-CONJUGATING ENZYME UBC12-RELATEDcoord: 51..225
score: 3.6E
NoneNo IPR availableSMARTSM00212ubc_7coord: 74..216
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g08410Cucsa.240270Cucumber (Gy14) v1cgycpeB0646
Cp4.1LG04g08410CmaCh11G012600Cucurbita maxima (Rimu)cmacpeB150
Cp4.1LG04g08410CmaCh19G006490Cucurbita maxima (Rimu)cmacpeB539
Cp4.1LG04g08410CmoCh19G006600Cucurbita moschata (Rifu)cmocpeB494
Cp4.1LG04g08410CmoCh11G013170Cucurbita moschata (Rifu)cmocpeB126
Cp4.1LG04g08410Cla015955Watermelon (97103) v1cpewmB665
Cp4.1LG04g08410Csa7G253730Cucumber (Chinese Long) v2cpecuB699
Cp4.1LG04g08410MELO3C012564Melon (DHL92) v3.5.1cpemeB608
Cp4.1LG04g08410ClCG02G005260Watermelon (Charleston Gray)cpewcgB590
Cp4.1LG04g08410CSPI07G11290Wild cucumber (PI 183967)cpecpiB701
Cp4.1LG04g08410Lsi11G010690Bottle gourd (USVL1VR-Ls)cpelsiB533
Cp4.1LG04g08410MELO3C012564.2Melon (DHL92) v3.6.1cpemedB719
Cp4.1LG04g08410CsaV3_7G023260Cucumber (Chinese Long) v3cpecucB0872
Cp4.1LG04g08410Bhi05G001055Wax gourdcpewgoB0855
Cp4.1LG04g08410Carg22030Silver-seed gourdcarcpeB0296
Cp4.1LG04g08410Carg26491Silver-seed gourdcarcpeB0932
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG04g08410Cp4.1LG15g05190Cucurbita pepo (Zucchini)cpecpeB269
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g08410Cucurbita pepo (Zucchini)cpecpeB500
Cp4.1LG04g08410Wild cucumber (PI 183967)cpecpiB671
Cp4.1LG04g08410Cucumber (Chinese Long) v2cpecuB668
Cp4.1LG04g08410Bottle gourd (USVL1VR-Ls)cpelsiB525
Cp4.1LG04g08410Cucumber (Gy14) v2cgybcpeB237
Cp4.1LG04g08410Melon (DHL92) v3.6.1cpemedB746
Cp4.1LG04g08410Cucumber (Chinese Long) v3cpecucB0835
Cp4.1LG04g08410Wax gourdcpewgoB0864