CmaCh19G006490 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh19G006490
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUbiquitin-conjugating enzyme
LocationCma_Chr19 : 6865465 .. 6868673 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCCGGGAAGCAGGGGATAGTTTCCGTTTCTGTGGTCCCTTCTTCACAGAAACAGCACAGTGGGTCAGTAAGTCGACCGAGCTGTCACTCACAGTGCCTTCGTGGCGATTTCTGATTGGTTTTTAGGAATGAAGGTGGAGTGAGTCTTTGATGTGGATGACGCCGGTCCGCAGTCGAAGCTCGAAAGCGAAGGGATCCGAATTTGGCCCTGCGGAACGTACGACAGAGAGAAAGAAGAGAGAGTTCTGAACCAACCAACCATCCATCCCTCCTCCCTCTTTCTTTCTCTCTCGTTTTCTTCCGGAGCTTCATCTTCACCTTCATCCTCTCAAGAATTCGTTTGCAACTCCTTCAAATCCAGGCAAGTCTCCATCTGCAATCTTTTCTTTTGATTCTTTCTGCTGCGATCGCATCCTCTTTTTTTCCTTAAGCTTCATTGATTGATTGATCGATCCAGGATTCAAGCTTCATTGATTTTGTGTTCGTTTTTATGCTTGTCGAATGAATCTAATCTTGATTACGGCTTGAATCATAGGTGTTGCCGCGTTTTGATGAGATCCTAATTGCTACGGTTTTTTATTTGATGTTTTATGGATTATCGTGCTGTTTGTTTTAATTGTTTTTTGATCCCGTGAGTCTTTTGCGTTGTCTATTTGCCGATTGGAAAGTTATTAACGATTTTTTTAAAAAAAAATCTTTAGTTCTACCTTTTGGTTCCTGCGTTTGCTGGCATATGGAGTTGGATATCTAGTATTTACTATCTTATCAGCTATATATTGTGATCCAGTTGATTCTTGGTTGGATGGTTATGTAAACGATGTATTAGGAACACATGTGGCTAGAAAATGCGAGGAAACTTTTCCAAGGAAGTTTGGGGTTTCATTGGATATTATTATAGCAATTGTTAGTGTAATATTCTCATTTACTTAGGAATACAGATTTTGCTTCATCTATGGTGTGAAGTCTTCGCTATTTCAATTTACTGTGTTTGAAATTGCAGCAGGAGATACGTTTTCATCATCTGCTGTGTTATGATTTGATTTTATTTCTTTCACTGTGTTATTATATGGCACAGTTTACTTTAATGGCATTAAGCCTATACTGTCTTTGCCATTTAAATTTACTGCTCTGAAATGGCAATTAGGGGCTTCGTGCCGTACTGGAGTAATCCAATATGTTGTGGTTCCGCGAGTCTAATTCTGCAATAAAAGAGCTCTGTTCCATGGAAAAACGTTATGTCATCTTCGGTGTTATAATTTGATTGGGATTAGTCATTCGTTCGTTCTACATTTCGGGAAAAAAACAATCTTTTTGCAATACTTTGTCTGCCAGTGCTGCGAATTTGATGTTCTATTTTTACGGTACTCTTCAGGAACAATGATTAAGCTTTTTAAAGTGAAGGAAAAGCAGAGAGAGATTGCACAGAATGCCAATGGAAAACCTCCTGGCAAGAAGCAAAGTGCAGGAGAATTGCGTCTTCAAAAAGGTAACCATTTTACTTCTTTTTCATTTACATCTTTGATGAAGAACTGATGAACTTGAAGCCATGATTCTGTGGTTTGTAGATTGTCGATCGTAGTCGTTCTTTTTCTAGAGCTTTTTACGAAAACCCATTTGGTTTGTTATATTTATTAGCATCCATTGTCTTAACTAAGGTTCAGATCAGTTTAGTGTTATGGATTTTTTAGATTTCAAATATGATATTGCATTCCTCTTTCTGCTGGAACTTTATTTTTAAGTCACTTATCAGTCTGGAATTAGCTATTGTGACGTGATGAAGTTGAAGTTTGGTGTCTTCCTAGCTTGCTCTTGGCGCACACTCTAGAAATTGTTGTAACTAATTTAGTTTAGTAGTTTATGTATCAAGGCCAACTAGAATAACTTTTATAATCTGTGTGGCTTTGAGCGCAAGAGGCCTTTTATCTTCTTGTGTTTTACTTTATTTGCTGAGTTATGCAAGTGATATAAATATGGTATGAACATCAGTTAATTTTTCTATTCACTGTGGTGTAATATGGCTATATACTCGTTTCGTTTGGTCTCATGCCTGGAGTTCAAGGTATTATTTGATTTTTAATTGTAGATATCAGTGAATTGAACCTACCAAAAACGTGTTGTATATCGTTTCCTAATGGCAAGGATGACTTGATGAACTTTGAGGTCACTATTCAGCCTGATGAAGGATATTATCTGTAAGTAGTCTCTTGTAGGCATTGTTTTTCAGTTTAGTTGCAATATGTTCTTCTCAAGATGAAATGCACGTGTTCACGTCACAATTCCCGAATCTCAGATGTGCATGATGCGTCTTATCACTTTAAATATTAGGAGCTGAAGATATATGCATGGATGTCATATCATTTTTATCAATGAAGCTTCAATGGAACTTTGCATTGGACTTGGTTCAACTGTATATATGCTGTGTATTGACACACTGTTTTTTTCATGTTTTAATCACTATTTCTTGGTTAAGATGTCTGTTCCTCCCCCCACCCAGTAGCTGTTCCTCGGTTATGAACTGTATAAGTCTCTTTGATTTCATGTTAACAGAGGCGGCACGTTTCTCTTCTCTTTCCAAGTTTCCCCTGTGTACCCTCACGAGCCACCAAAAGTGAAGTGCAAGACAAAGGTAACGATGCTGATCTTGTTGATTAATTTGTGTTTTCTTTTTAATATTTTAGAAGTAGCTGAACACATTTGACTTGCAGGTGTATCATCCTAATATTGACTTGGAAGGAAATGTTTGTCTCAACATTTTAAGAGAGGACTGGAAGCCCGTTCTGAATATCAACACTATAATATACGGATTATTTCATCTTTTCACGGTATTTACGATTTTACCGATGTCGAACTTACTACTGCAAACATTCAAACATTTATCTGTGTTTACATTTAATCACACTCATACGACTGGAATGGTTCTTTATGTGAAGTTTAGGACCCAAAATAAAAAATTCCAAATGCTTTTAAGAAATCAAAATGGAAATAGGCGCATAAATTTAAGGAACTGAATAGAGTTAGAATCTCAGTGGGGTTCTTTTAATCACATTTTATATTTTCTATTCTTGCAGCAACCAAATCATGAAGACCCCCTCAACCACGATGCTGCAGCTGTTTTAAGGGATAACCCGAAGACGTTCGAATCCAATGTGAGAAGAGCCATGGCTGGGGGATATGTGGGACAGACATACTTCACGCGTTGCATGTAG

mRNA sequence

ATGAGCCGGGAAGCAGGGGATAGTTTCCGTTTCTGTGGTCCCTTCTTCACAGAAACAGCACAGTGGGTCAGAACAATGATTAAGCTTTTTAAAGTGAAGGAAAAGCAGAGAGAGATTGCACAGAATGCCAATGGAAAACCTCCTGGCAAGAAGCAAAGTGCAGGAGAATTGCGTCTTCAAAAAGATATCAGTGAATTGAACCTACCAAAAACGTGTTGTATATCGTTTCCTAATGGCAAGGATGACTTGATGAACTTTGAGGTCACTATTCAGCCTGATGAAGGATATTATCTAGGCGGCACGTTTCTCTTCTCTTTCCAAGTTTCCCCTGTGTACCCTCACGAGCCACCAAAAGTGAAGTGCAAGACAAAGGTGTATCATCCTAATATTGACTTGGAAGGAAATGTTTGTCTCAACATTTTAAGAGAGGACTGGAAGCCCGTTCTGAATATCAACACTATAATATACGGATTATTTCATCTTTTCACGCAACCAAATCATGAAGACCCCCTCAACCACGATGCTGCAGCTGTTTTAAGGGATAACCCGAAGACGTTCGAATCCAATGTGAGAAGAGCCATGGCTGGGGGATATGTGGGACAGACATACTTCACGCGTTGCATGTAG

Coding sequence (CDS)

ATGAGCCGGGAAGCAGGGGATAGTTTCCGTTTCTGTGGTCCCTTCTTCACAGAAACAGCACAGTGGGTCAGAACAATGATTAAGCTTTTTAAAGTGAAGGAAAAGCAGAGAGAGATTGCACAGAATGCCAATGGAAAACCTCCTGGCAAGAAGCAAAGTGCAGGAGAATTGCGTCTTCAAAAAGATATCAGTGAATTGAACCTACCAAAAACGTGTTGTATATCGTTTCCTAATGGCAAGGATGACTTGATGAACTTTGAGGTCACTATTCAGCCTGATGAAGGATATTATCTAGGCGGCACGTTTCTCTTCTCTTTCCAAGTTTCCCCTGTGTACCCTCACGAGCCACCAAAAGTGAAGTGCAAGACAAAGGTGTATCATCCTAATATTGACTTGGAAGGAAATGTTTGTCTCAACATTTTAAGAGAGGACTGGAAGCCCGTTCTGAATATCAACACTATAATATACGGATTATTTCATCTTTTCACGCAACCAAATCATGAAGACCCCCTCAACCACGATGCTGCAGCTGTTTTAAGGGATAACCCGAAGACGTTCGAATCCAATGTGAGAAGAGCCATGGCTGGGGGATATGTGGGACAGACATACTTCACGCGTTGCATGTAG

Protein sequence

MSREAGDSFRFCGPFFTETAQWVRTMIKLFKVKEKQREIAQNANGKPPGKKQSAGELRLQKDISELNLPKTCCISFPNGKDDLMNFEVTIQPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKTFESNVRRAMAGGYVGQTYFTRCM
Homology
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BLAST of CmaCh19G006490 vs. Swiss-Prot
Match: RCE1_ARATH (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 7.3e-88
Identity = 155/184 (84.24%), Postives = 166/184 (90.22%), Query Frame = 1 

Query: 26  MIKLFKVKEKQREIAQNAN-GKPPGKKQSAGELRLQKDISELNLPKTCCISFPNGKDDLM 85
           MI LFKVKEKQRE AQNA  G    KKQSAGELRL KDISELNLP +C ISFPNGKDDLM
Sbjct: 1   MIGLFKVKEKQREQAQNATRGGASVKKQSAGELRLHKDISELNLPSSCSISFPNGKDDLM 60

Query: 86  NFEVTIQPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILRED 145
           NFEV+I+PD+GYY  GTF+F+FQVSPVYPHE PKVKCKTKVYHPNIDLEGNVCLNILRED
Sbjct: 61  NFEVSIKPDDGYYHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED 120

Query: 146 WKPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKTFESNVRRAMAGGYVGQTYF 205
           WKPVLNINT+IYGLFHLFT+PN EDPLNHDAAAVLRDNPK FE+NVRRAM GGYVGQT+F
Sbjct: 121 WKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRRAMTGGYVGQTFF 180

Query: 206 TRCM 209
            RC+
Sbjct: 181 PRCI 184

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BLAST of CmaCh19G006490 vs. Swiss-Prot
Match: UB12L_ARATH (Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana GN=RCE2 PE=2 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 2.4e-86
Identity = 154/185 (83.24%), Postives = 166/185 (89.73%), Query Frame = 1 

Query: 26  MIKLFKVKEKQREIAQNANGKPPG--KKQSAGELRLQKDISELNLPKTCCISFPNGKDDL 85
           MI LFKVKEKQRE +Q+ NG+     KKQSAGELRL KDISELNLPK+C ISFPNGK+DL
Sbjct: 1   MIGLFKVKEKQREESQSNNGRGASTVKKQSAGELRLHKDISELNLPKSCKISFPNGKNDL 60

Query: 86  MNFEVTIQPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILRE 145
           MNFEVTI+PDEGYYL G F+FSFQVS +YPHE PKVKCKTKVYHPNIDLEGNVCLNILRE
Sbjct: 61  MNFEVTIKPDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE 120

Query: 146 DWKPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKTFESNVRRAMAGGYVGQTY 205
           DWKPVLNINT+IYGLFHLFT+PN+EDPLNH+AAAVLRDNPKTFE NVRRAM GG VGQT 
Sbjct: 121 DWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVRRAMMGGQVGQTS 180

Query: 206 FTRCM 209
           F RCM
Sbjct: 181 FPRCM 185

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BLAST of CmaCh19G006490 vs. Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.3e-65
Identity = 117/183 (63.93%), Postives = 145/183 (79.23%), Query Frame = 1 

Query: 26  MIKLFKVKEKQREIAQNANGKPPGKKQSAGELRLQKDISELNLPKTCCISFPNGKDDLMN 85
           MIKLF +K++++E       K   KK SA +LR+QKDI+ELNLPKTC I F +  DDL+N
Sbjct: 1   MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDINELNLPKTCEIEFSD-HDDLLN 60

Query: 86  FEVTIQPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 145
           F++ I PDEG+Y GG F+FSF+V   YPH+PPKVKC+T VYHPNIDLEGNVCLNILREDW
Sbjct: 61  FKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDW 120

Query: 146 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKTFESNVRRAMAGGYVGQTYFT 205
           KPVL IN+IIYGL +LF +PN EDPLN +AA VL++N + FE NV+R+M GGY+G TYF 
Sbjct: 121 KPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFE 180

Query: 206 RCM 209
           RC+
Sbjct: 181 RCL 182

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BLAST of CmaCh19G006490 vs. Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.3e-65
Identity = 117/183 (63.93%), Postives = 145/183 (79.23%), Query Frame = 1 

Query: 26  MIKLFKVKEKQREIAQNANGKPPGKKQSAGELRLQKDISELNLPKTCCISFPNGKDDLMN 85
           MIKLF +K++++E       K   KK SA +LR+QKDI+ELNLPKTC I F +  DDL+N
Sbjct: 1   MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDITELNLPKTCEIEFSD-HDDLLN 60

Query: 86  FEVTIQPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 145
           F++ I PDEG+Y GG F+FSF+V   YPH+PPKVKC+T VYHPNIDLEGNVCLNILREDW
Sbjct: 61  FKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDW 120

Query: 146 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKTFESNVRRAMAGGYVGQTYFT 205
           KPVL IN+IIYGL +LF +PN EDPLN +AA VL++N + FE NV+R+M GGY+G TYF 
Sbjct: 121 KPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFE 180

Query: 206 RCM 209
           RC+
Sbjct: 181 RCL 182

[Close]
BLAST of CmaCh19G006490 vs. Swiss-Prot
Match: UBC12_BOVIN (NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 3.0e-65
Identity = 117/183 (63.93%), Postives = 145/183 (79.23%), Query Frame = 1 

Query: 26  MIKLFKVKEKQREIAQNANGKPPGKKQSAGELRLQKDISELNLPKTCCISFPNGKDDLMN 85
           MIKLF +K++++E       K   KK SA +LR+QKDI+ELNLPKTC ISF +  DDL+N
Sbjct: 1   MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDINELNLPKTCDISFSD-PDDLLN 60

Query: 86  FEVTIQPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 145
           F++ I PDEG+Y  G F+FSF+V   YPH+PPKVKC+T VYHPNIDLEGNVCLNILREDW
Sbjct: 61  FKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDW 120

Query: 146 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKTFESNVRRAMAGGYVGQTYFT 205
           KPVL IN+IIYGL +LF +PN EDPLN +AA VL++N + FE NV+R+M GGY+G TYF 
Sbjct: 121 KPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFE 180

Query: 206 RCM 209
           RC+
Sbjct: 181 RCL 182

[Close]
BLAST of CmaCh19G006490 vs. TrEMBL
Match: A0A0A0K481_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G253730 PE=3 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 3.8e-99
Identity = 176/183 (96.17%), Postives = 176/183 (96.17%), Query Frame = 1 

Query: 26  MIKLFKVKEKQREIAQNANGKPPGKKQSAGELRLQKDISELNLPKTCCISFPNGKDDLMN 85
           MIKLFKVKEKQREIA NANG PP KKQSAGELRLQKDISELNLPKTC ISFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQREIAANANGVPPVKKQSAGELRLQKDISELNLPKTCNISFPNGKDDLMN 60

Query: 86  FEVTIQPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 145
           FEVTI PDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 146 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKTFESNVRRAMAGGYVGQTYFT 205
           KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPK FE NVRRAMAGGYVGQTYFT
Sbjct: 121 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFEFNVRRAMAGGYVGQTYFT 180

Query: 206 RCM 209
           RCM
Sbjct: 181 RCM 183

[Close]
BLAST of CmaCh19G006490 vs. TrEMBL
Match: A0A061E1P9_THECC (RUB1 conjugating enzyme 1 isoform 1 OS=Theobroma cacao GN=TCM_007289 PE=3 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.2e-97
Identity = 172/183 (93.99%), Postives = 177/183 (96.72%), Query Frame = 1 

Query: 26  MIKLFKVKEKQREIAQNANGKPPGKKQSAGELRLQKDISELNLPKTCCISFPNGKDDLMN 85
           MIKLFKVKEKQREIA+NANGK P KKQSAGELRL KDISELNLPKTC ISFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQREIAENANGKAPVKKQSAGELRLHKDISELNLPKTCSISFPNGKDDLMN 60

Query: 86  FEVTIQPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 145
           FEVTI+PDEGYYLGGTFLFSFQVSP+YPHE PKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIRPDEGYYLGGTFLFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 146 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKTFESNVRRAMAGGYVGQTYFT 205
           KPVLNINTIIYGLFHLFTQPN+EDPLNHDAAAVLRDNPK FESNVRRAMAGGYVGQT+FT
Sbjct: 121 KPVLNINTIIYGLFHLFTQPNYEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFT 180

Query: 206 RCM 209
           RCM
Sbjct: 181 RCM 183

[Close]
BLAST of CmaCh19G006490 vs. TrEMBL
Match: F6HQJ9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g02110 PE=3 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.2e-97
Identity = 171/185 (92.43%), Postives = 178/185 (96.22%), Query Frame = 1 

Query: 24  RTMIKLFKVKEKQREIAQNANGKPPGKKQSAGELRLQKDISELNLPKTCCISFPNGKDDL 83
           R MIKLFKVKEKQREIA+NANGK P KKQSAGELRL KDISELNLPKTCCISFPNGKDDL
Sbjct: 31  RKMIKLFKVKEKQREIAENANGKAPVKKQSAGELRLHKDISELNLPKTCCISFPNGKDDL 90

Query: 84  MNFEVTIQPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILRE 143
           M+FEVTI+PDEGYYLGGTF+FSFQVSP+YPHE PKVKCKTKVYHPNIDLEGNVCLNILRE
Sbjct: 91  MSFEVTIRPDEGYYLGGTFVFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE 150

Query: 144 DWKPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKTFESNVRRAMAGGYVGQTY 203
           DWKPVLNINTIIYGLFHLFTQPN+EDPLNHDAAAVLRDNPK FESNVRRAMAGGYVGQT+
Sbjct: 151 DWKPVLNINTIIYGLFHLFTQPNYEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGQTF 210

Query: 204 FTRCM 209
           F RCM
Sbjct: 211 FPRCM 215

[Close]
BLAST of CmaCh19G006490 vs. TrEMBL
Match: A5AHT5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034608 PE=3 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 3.5e-97
Identity = 170/183 (92.90%), Postives = 177/183 (96.72%), Query Frame = 1 

Query: 26  MIKLFKVKEKQREIAQNANGKPPGKKQSAGELRLQKDISELNLPKTCCISFPNGKDDLMN 85
           MIKLFKVKEKQREIA+NANGK P KKQSAGELRL KDISELNLPKTCCISFPNGKDDLM+
Sbjct: 1   MIKLFKVKEKQREIAENANGKAPVKKQSAGELRLHKDISELNLPKTCCISFPNGKDDLMS 60

Query: 86  FEVTIQPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 145
           FEVTI+PDEGYYLGGTF+FSFQVSP+YPHE PKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIRPDEGYYLGGTFVFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 146 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKTFESNVRRAMAGGYVGQTYFT 205
           KPVLNINTIIYGLFHLFTQPN+EDPLNHDAAAVLRDNPK FESNVRRAMAGGYVGQT+F 
Sbjct: 121 KPVLNINTIIYGLFHLFTQPNYEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGQTFFP 180

Query: 206 RCM 209
           RCM
Sbjct: 181 RCM 183

[Close]
BLAST of CmaCh19G006490 vs. TrEMBL
Match: Q2I309_VITPS (Ubiquitin-conjugating enzyme OS=Vitis pseudoreticulata PE=2 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 3.9e-96
Identity = 169/183 (92.35%), Postives = 176/183 (96.17%), Query Frame = 1 

Query: 26  MIKLFKVKEKQREIAQNANGKPPGKKQSAGELRLQKDISELNLPKTCCISFPNGKDDLMN 85
           MIKLFKVKEKQREIA+NANGK P KKQSAGELRL KDISELNLPKTCCISFPNGKDDLM+
Sbjct: 1   MIKLFKVKEKQREIAENANGKAPVKKQSAGELRLHKDISELNLPKTCCISFPNGKDDLMS 60

Query: 86  FEVTIQPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 145
           FEVTI+PDEG YLGGTF+FSFQVSP+YPHE PKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIRPDEGCYLGGTFVFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 146 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKTFESNVRRAMAGGYVGQTYFT 205
           KPVLNINTIIYGLFHLFTQPN+EDPLNHDAAAVLRDNPK FESNVRRAMAGGYVGQT+F 
Sbjct: 121 KPVLNINTIIYGLFHLFTQPNYEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGQTFFP 180

Query: 206 RCM 209
           RCM
Sbjct: 181 RCM 183

[Close]
BLAST of CmaCh19G006490 vs. TAIR10
Match: AT4G36800.1 (AT4G36800.1 RUB1 conjugating enzyme 1)

HSP 1 Score: 324.7 bits (831), Expect = 4.1e-89
Identity = 155/184 (84.24%), Postives = 166/184 (90.22%), Query Frame = 1 

Query: 26  MIKLFKVKEKQREIAQNAN-GKPPGKKQSAGELRLQKDISELNLPKTCCISFPNGKDDLM 85
           MI LFKVKEKQRE AQNA  G    KKQSAGELRL KDISELNLP +C ISFPNGKDDLM
Sbjct: 1   MIGLFKVKEKQREQAQNATRGGASVKKQSAGELRLHKDISELNLPSSCSISFPNGKDDLM 60

Query: 86  NFEVTIQPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILRED 145
           NFEV+I+PD+GYY  GTF+F+FQVSPVYPHE PKVKCKTKVYHPNIDLEGNVCLNILRED
Sbjct: 61  NFEVSIKPDDGYYHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED 120

Query: 146 WKPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKTFESNVRRAMAGGYVGQTYF 205
           WKPVLNINT+IYGLFHLFT+PN EDPLNHDAAAVLRDNPK FE+NVRRAM GGYVGQT+F
Sbjct: 121 WKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRRAMTGGYVGQTFF 180

Query: 206 TRCM 209
            RC+
Sbjct: 181 PRCI 184

[Close]
BLAST of CmaCh19G006490 vs. TAIR10
Match: AT2G18600.1 (AT2G18600.1 Ubiquitin-conjugating enzyme family protein)

HSP 1 Score: 319.7 bits (818), Expect = 1.3e-87
Identity = 154/185 (83.24%), Postives = 166/185 (89.73%), Query Frame = 1 

Query: 26  MIKLFKVKEKQREIAQNANGKPPG--KKQSAGELRLQKDISELNLPKTCCISFPNGKDDL 85
           MI LFKVKEKQRE +Q+ NG+     KKQSAGELRL KDISELNLPK+C ISFPNGK+DL
Sbjct: 1   MIGLFKVKEKQREESQSNNGRGASTVKKQSAGELRLHKDISELNLPKSCKISFPNGKNDL 60

Query: 86  MNFEVTIQPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILRE 145
           MNFEVTI+PDEGYYL G F+FSFQVS +YPHE PKVKCKTKVYHPNIDLEGNVCLNILRE
Sbjct: 61  MNFEVTIKPDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE 120

Query: 146 DWKPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKTFESNVRRAMAGGYVGQTY 205
           DWKPVLNINT+IYGLFHLFT+PN+EDPLNH+AAAVLRDNPKTFE NVRRAM GG VGQT 
Sbjct: 121 DWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVRRAMMGGQVGQTS 180

Query: 206 FTRCM 209
           F RCM
Sbjct: 181 FPRCM 185

[Close]
BLAST of CmaCh19G006490 vs. TAIR10
Match: AT2G16740.1 (AT2G16740.1 ubiquitin-conjugating enzyme 29)

HSP 1 Score: 110.9 bits (276), Expect = 9.4e-25
Identity = 52/136 (38.24%), Postives = 82/136 (60.29%), Query Frame = 1 

Query: 58  RLQKDISELNL-PKTCCISFPNGKDDLMNFEVTIQ-PDEGYYLGGTFLFSFQVSPVYPHE 117
           R+ K++ EL   P   C + P G +D+ +++ TI  P+E  Y GG FL +    P YP +
Sbjct: 5   RILKELKELQRDPPVSCSAGPTG-EDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFK 64

Query: 118 PPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNHEDPLNHDA 177
           PPKV  +TKV+HPNI+  GN+CL+IL++ W P L I+ ++  +  L T PN +DPL  + 
Sbjct: 65  PPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 124

Query: 178 AAVLRDNPKTFESNVR 192
           A + + +   +E+  R
Sbjct: 125 AHIYKTDKTKYEAMAR 139

[Close]
BLAST of CmaCh19G006490 vs. TAIR10
Match: AT3G08690.1 (AT3G08690.1 ubiquitin-conjugating enzyme 11)

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-24
Identity = 54/136 (39.71%), Postives = 81/136 (59.56%), Query Frame = 1 

Query: 58  RLQKDISELNL-PKTCCISFPNGKDDLMNFEVTIQ-PDEGYYLGGTFLFSFQVSPVYPHE 117
           R+ K++ +L   P + C + P   +D+ +++ TI  P E  Y GG FL S    P YP +
Sbjct: 5   RILKELKDLQKDPPSNCSAGPVA-EDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFK 64

Query: 118 PPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNHEDPLNHDA 177
           PPKV  KTKVYHPNI+  G++CL+IL+E W P L I+ ++  +  L T PN +DPL  + 
Sbjct: 65  PPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 124

Query: 178 AAVLRDNPKTFESNVR 192
           A + + +   +ES  R
Sbjct: 125 AHMYKTDRSKYESTAR 139

[Close]
BLAST of CmaCh19G006490 vs. TAIR10
Match: AT5G53300.1 (AT5G53300.1 ubiquitin-conjugating enzyme 10)

HSP 1 Score: 109.4 bits (272), Expect = 2.7e-24
Identity = 52/136 (38.24%), Postives = 81/136 (59.56%), Query Frame = 1 

Query: 58  RLQKDISELNL-PKTCCISFPNGKDDLMNFEVTIQ-PDEGYYLGGTFLFSFQVSPVYPHE 117
           R+ K++ +L   P T C + P   +D+ +++ TI  P E  Y GG FL +    P YP +
Sbjct: 5   RILKELKDLQKDPPTSCSAGPVA-EDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFK 64

Query: 118 PPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNHEDPLNHDA 177
           PPKV  +TKV+HPNI+  G++CL+IL+E W P L I+ ++  +  L T PN +DPL  + 
Sbjct: 65  PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 124

Query: 178 AAVLRDNPKTFESNVR 192
           A + + +   +ES  R
Sbjct: 125 AHMYKTDKNKYESTAR 139

[Close]
BLAST of CmaCh19G006490 vs. NCBI nr
Match: gi|449461136|ref|XP_004148299.1| (PREDICTED: NEDD8-conjugating enzyme Ubc12 [Cucumis sativus])

HSP 1 Score: 369.0 bits (946), Expect = 5.4e-99
Identity = 176/183 (96.17%), Postives = 176/183 (96.17%), Query Frame = 1 

Query: 26  MIKLFKVKEKQREIAQNANGKPPGKKQSAGELRLQKDISELNLPKTCCISFPNGKDDLMN 85
           MIKLFKVKEKQREIA NANG PP KKQSAGELRLQKDISELNLPKTC ISFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQREIAANANGVPPVKKQSAGELRLQKDISELNLPKTCNISFPNGKDDLMN 60

Query: 86  FEVTIQPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 145
           FEVTI PDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 146 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKTFESNVRRAMAGGYVGQTYFT 205
           KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPK FE NVRRAMAGGYVGQTYFT
Sbjct: 121 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFEFNVRRAMAGGYVGQTYFT 180

Query: 206 RCM 209
           RCM
Sbjct: 181 RCM 183

[Close]
BLAST of CmaCh19G006490 vs. NCBI nr
Match: gi|659092421|ref|XP_008447053.1| (PREDICTED: NEDD8-conjugating enzyme Ubc12-like [Cucumis melo])

HSP 1 Score: 368.6 bits (945), Expect = 7.1e-99
Identity = 175/183 (95.63%), Postives = 176/183 (96.17%), Query Frame = 1 

Query: 26  MIKLFKVKEKQREIAQNANGKPPGKKQSAGELRLQKDISELNLPKTCCISFPNGKDDLMN 85
           MIKLFKVKEKQREIA NANG PP KKQ+AGELRLQKDISELNLPKTC ISFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQREIAANANGVPPVKKQTAGELRLQKDISELNLPKTCSISFPNGKDDLMN 60

Query: 86  FEVTIQPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 145
           FEVTI PDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 146 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKTFESNVRRAMAGGYVGQTYFT 205
           KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPK FE NVRRAMAGGYVGQTYFT
Sbjct: 121 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFEFNVRRAMAGGYVGQTYFT 180

Query: 206 RCM 209
           RCM
Sbjct: 181 RCM 183

[Close]
BLAST of CmaCh19G006490 vs. NCBI nr
Match: gi|590687671|ref|XP_007042730.1| (RUB1 conjugating enzyme 1 isoform 1 [Theobroma cacao])

HSP 1 Score: 364.0 bits (933), Expect = 1.7e-97
Identity = 172/183 (93.99%), Postives = 177/183 (96.72%), Query Frame = 1 

Query: 26  MIKLFKVKEKQREIAQNANGKPPGKKQSAGELRLQKDISELNLPKTCCISFPNGKDDLMN 85
           MIKLFKVKEKQREIA+NANGK P KKQSAGELRL KDISELNLPKTC ISFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQREIAENANGKAPVKKQSAGELRLHKDISELNLPKTCSISFPNGKDDLMN 60

Query: 86  FEVTIQPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 145
           FEVTI+PDEGYYLGGTFLFSFQVSP+YPHE PKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIRPDEGYYLGGTFLFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 146 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKTFESNVRRAMAGGYVGQTYFT 205
           KPVLNINTIIYGLFHLFTQPN+EDPLNHDAAAVLRDNPK FESNVRRAMAGGYVGQT+FT
Sbjct: 121 KPVLNINTIIYGLFHLFTQPNYEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFT 180

Query: 206 RCM 209
           RCM
Sbjct: 181 RCM 183

[Close]
BLAST of CmaCh19G006490 vs. NCBI nr
Match: gi|359475268|ref|XP_003631628.1| (PREDICTED: NEDD8-conjugating enzyme Ubc12 [Vitis vinifera])

HSP 1 Score: 362.5 bits (929), Expect = 5.1e-97
Identity = 170/183 (92.90%), Postives = 177/183 (96.72%), Query Frame = 1 

Query: 26  MIKLFKVKEKQREIAQNANGKPPGKKQSAGELRLQKDISELNLPKTCCISFPNGKDDLMN 85
           MIKLFKVKEKQREIA+NANGK P KKQSAGELRL KDISELNLPKTCCISFPNGKDDLM+
Sbjct: 1   MIKLFKVKEKQREIAENANGKAPVKKQSAGELRLHKDISELNLPKTCCISFPNGKDDLMS 60

Query: 86  FEVTIQPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 145
           FEVTI+PDEGYYLGGTF+FSFQVSP+YPHE PKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIRPDEGYYLGGTFVFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 146 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKTFESNVRRAMAGGYVGQTYFT 205
           KPVLNINTIIYGLFHLFTQPN+EDPLNHDAAAVLRDNPK FESNVRRAMAGGYVGQT+F 
Sbjct: 121 KPVLNINTIIYGLFHLFTQPNYEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGQTFFP 180

Query: 206 RCM 209
           RCM
Sbjct: 181 RCM 183

[Close]
BLAST of CmaCh19G006490 vs. NCBI nr
Match: gi|747073537|ref|XP_011083732.1| (PREDICTED: NEDD8-conjugating enzyme Ubc12 [Sesamum indicum])

HSP 1 Score: 360.1 bits (923), Expect = 2.5e-96
Identity = 166/183 (90.71%), Postives = 177/183 (96.72%), Query Frame = 1 

Query: 26  MIKLFKVKEKQREIAQNANGKPPGKKQSAGELRLQKDISELNLPKTCCISFPNGKDDLMN 85
           MIKLFKVKEKQRE+A++ANGKPPGKKQSAGELRL KDISELNLPKTC ISFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQRELAESANGKPPGKKQSAGELRLHKDISELNLPKTCSISFPNGKDDLMN 60

Query: 86  FEVTIQPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW 145
           FEVTI+PDEGYYL GTF+FSFQ+SP+YPHE PKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIRPDEGYYLSGTFVFSFQISPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 146 KPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKTFESNVRRAMAGGYVGQTYFT 205
           KPVLNINTIIYGL+HLFT+PNHEDPLNHDAAAVLRDNPK FESNVRRAMAGGYVGQT+F 
Sbjct: 121 KPVLNINTIIYGLYHLFTEPNHEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGQTFFP 180

Query: 206 RCM 209
           RC+
Sbjct: 181 RCI 183

The following BLAST results are available for this feature:
BLAST of CmaCh19G006490 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RCE1_ARATH7.3e-8884.24NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1[more]
UB12L_ARATH2.4e-8683.24Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana GN=RCE2 PE=... [more]
UBC12_XENTR2.3e-6563.93NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1[more]
UBC12_XENLA2.3e-6563.93NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1[more]
UBC12_BOVIN3.0e-6563.93NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1[more]
BLAST of CmaCh19G006490 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K481_CUCSA3.8e-9996.17Uncharacterized protein OS=Cucumis sativus GN=Csa_7G253730 PE=3 SV=1[more]
A0A061E1P9_THECC1.2e-9793.99RUB1 conjugating enzyme 1 isoform 1 OS=Theobroma cacao GN=TCM_007289 PE=3 SV=1[more]
F6HQJ9_VITVI1.2e-9792.43Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g02110 PE=3 SV=... [more]
A5AHT5_VITVI3.5e-9792.90Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034608 PE=3 SV=1[more]
Q2I309_VITPS3.9e-9692.35Ubiquitin-conjugating enzyme OS=Vitis pseudoreticulata PE=2 SV=1[more]
BLAST of CmaCh19G006490 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G36800.14.1e-8984.24 RUB1 conjugating enzyme 1[more]
AT2G18600.11.3e-8783.24 Ubiquitin-conjugating enzyme family protein[more]
AT2G16740.19.4e-2538.24 ubiquitin-conjugating enzyme 29[more]
AT3G08690.11.2e-2439.71 ubiquitin-conjugating enzyme 11[more]
AT5G53300.12.7e-2438.24 ubiquitin-conjugating enzyme 10[more]
BLAST of CmaCh19G006490 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449461136|ref|XP_004148299.1|5.4e-9996.17PREDICTED: NEDD8-conjugating enzyme Ubc12 [Cucumis sativus][more]
gi|659092421|ref|XP_008447053.1|7.1e-9995.63PREDICTED: NEDD8-conjugating enzyme Ubc12-like [Cucumis melo][more]
gi|590687671|ref|XP_007042730.1|1.7e-9793.99RUB1 conjugating enzyme 1 isoform 1 [Theobroma cacao][more]
gi|359475268|ref|XP_003631628.1|5.1e-9792.90PREDICTED: NEDD8-conjugating enzyme Ubc12 [Vitis vinifera][more]
gi|747073537|ref|XP_011083732.1|2.5e-9690.71PREDICTED: NEDD8-conjugating enzyme Ubc12 [Sesamum indicum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
IPR023313UBQ-conjugating_AS
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh19G006490.1CmaCh19G006490.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 58..193
score: 2.3
IPR000608Ubiquitin-conjugating enzyme E2PROFILEPS50127UBIQUITIN_CONJUGAT_2coord: 57..188
score: 29
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 38..193
score: 1.3
IPR016135Ubiquitin-conjugating enzyme/RWD-likeunknownSSF54495UBC-likecoord: 46..205
score: 1.28
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 126..141
scor
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 34..208
score: 2.5E
NoneNo IPR availablePANTHERPTHR24067:SF123NEDD8-CONJUGATING ENZYME UBC12-RELATEDcoord: 34..208
score: 2.5E
NoneNo IPR availableSMARTSM00212ubc_7coord: 57..199
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh19G006490Cucsa.240270Cucumber (Gy14) v1cgycmaB0677
CmaCh19G006490Cla015955Watermelon (97103) v1cmawmB503
CmaCh19G006490Csa7G253730Cucumber (Chinese Long) v2cmacuB530
CmaCh19G006490MELO3C012564Melon (DHL92) v3.5.1cmameB462
CmaCh19G006490ClCG02G005260Watermelon (Charleston Gray)cmawcgB460
CmaCh19G006490CSPI07G11290Wild cucumber (PI 183967)cmacpiB536
CmaCh19G006490CmoCh19G006600Cucurbita moschata (Rifu)cmacmoB508
CmaCh19G006490CmoCh11G013170Cucurbita moschata (Rifu)cmacmoB494
CmaCh19G006490Lsi11G010690Bottle gourd (USVL1VR-Ls)cmalsiB472
CmaCh19G006490Cp4.1LG15g05190Cucurbita pepo (Zucchini)cmacpeB522
CmaCh19G006490Cp4.1LG19g11700Cucurbita pepo (Zucchini)cmacpeB532
CmaCh19G006490Cp4.1LG04g08410Cucurbita pepo (Zucchini)cmacpeB539
CmaCh19G006490MELO3C012564.2Melon (DHL92) v3.6.1cmamedB538
CmaCh19G006490CsaV3_7G023260Cucumber (Chinese Long) v3cmacucB0641
CmaCh19G006490Cla97C02G032280Watermelon (97103) v2cmawmbB531
CmaCh19G006490Bhi05G001055Wax gourdcmawgoB0641
CmaCh19G006490CsGy7G010640Cucumber (Gy14) v2cgybcmaB947
CmaCh19G006490Carg05264Silver-seed gourdcarcmaB1118
CmaCh19G006490Carg22030Silver-seed gourdcarcmaB0288
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh19G006490CmaCh07G007550Cucurbita maxima (Rimu)cmacmaB462
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh19G006490Cucurbita pepo (Zucchini)cmacpeB526
CmaCh19G006490Bottle gourd (USVL1VR-Ls)cmalsiB469
CmaCh19G006490Cucumber (Gy14) v2cgybcmaB212
CmaCh19G006490Cucumber (Chinese Long) v3cmacucB0608
CmaCh19G006490Wax gourdcmawgoB0668
CmaCh19G006490Cucurbita maxima (Rimu)cmacmaB446
CmaCh19G006490Cucurbita maxima (Rimu)cmacmaB452
CmaCh19G006490Cucumber (Gy14) v1cgycmaB0252
CmaCh19G006490Cucurbita moschata (Rifu)cmacmoB518
CmaCh19G006490Wild cucumber (PI 183967)cmacpiB512
CmaCh19G006490Cucumber (Chinese Long) v2cmacuB507