Cp4.1LG04g08110 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATGATTATGAAGAAGTTGGAGGATTCGTATTTCCAAAAGCTGCCCAAAATCTTCGCAACGACTTCGTTAGAAGCAATAAACAAACTAGAAATCGCGCTTCGACGATTGACGAATCTCAACCGTTCAAACAACATTGCCGTCTCTCCGTCACCGTCGCCGTCGCCGGTTACCTTCGTAAGCGGCAACTACCTTTTCCCTTCTTCCTCACGGATAGCTCATCCATGAGACTTCTCTCGCTCTAGTTTTTTTTTCTCTCTCTAGAGATGGTTTGGGAGCGGCAATGAAAGCAGAGTTTGAGGTGGAGGTGGAGAGGCGATGGGTGATTGTAAGCGAGTTATGGTGAGGACGGCGGCGAGTAATGCTGGTTGGATGTCTAAGAGGAGGAGAATTGCCGGTTCGCCGGAGAGGTTGAGGCCGTCGACGTCTCAGTCTGACTTAAGCGACGGTTGTTTGTGGTTGGAGAATGCGACGACGTCTGTCTCGCGCTTGGAGAAGAGGAATTCCGTTGGCGTTGTCGCCGGAGGTGAGATGAGTGATGGTTTTTCAGCGGATCAGTTTCCTGTTTCTTGTAGCTCCGGTAACGACTGCGGCAAGGCCACCGGCCTGAAGGACGCCGTGAAATTCGAAGATCTGGAGGTTAATTCCGAATTCTTGGTTGAGGAGTGTACTTCTCTCTTTGCTTTTAGTTGGTTCTTTGTTTTTTTAGTTTGGAATTTAATTTCGAGTTCCTCTGTTTTGGATTGCGAGAAAATGGAGTAGAACAAGAAAATGATTATTAGATTTAACCGGTTCATCAGTCTTGCATTCTAAAATTTCCGTTGAAAATGAATTCAGATGAATTTGTTCTTCATATAACCCTGACTCTTTCCTGCAATTTTTTTCCTGTAATGAACAGTTCGTGATTTGTTCGTTCCTTCGTTGTTCTATTCAATTCTATTTTACTCCTTTTAAACTAACGACTGTTTCTACGAAATGTCTGTTTAGATTTTGAATTTGTATGTATTTTGAATCGTATTTATTGACATTTATGTTCAATGCGCCATTGCAGCCGACCAAGAGCTTCGAAACCGTAGAGTCGACTCGCGTTAACGGCATTCAAAGGTTCATTGCACTTCACTATTCCTTCAAATTCCCCTAACGAAACGGATTCCTAAACGCTTAGTCTTCTTCTCTTTCGCTATTTCTCACTCTGTTTGATATTTAATGTCCGTTTTAATCTGAATCTCTTCAGAGAAAGCACTCCAACGAGCGATCTCCACGGAGAATCCGACGTAATGGACACACTAGCGAAGAGCTTCTTGACTGAGAAACAGAAGCGAACTGATCGTCCGATGAAGACGCCGCCGATTTTTGAGATTGAAGATTTCTTCGCCGAGGCGGAGAAGTACGAGCAGAAGCGCTTCTCAGAGAAGTGAGTACAATTTTTCCATGCGCATGATAACCATCTCTGATTCGGCGAATTTAGTCGAATCAAAACCTAATTGAACTTGTTCTTCTTCTTCTTCTTCTTTAATTGATTTTACCTTTTGGCCTTCATCTTGTGCAGGTACAACTTCGATATAGTGATGGATGTGCCATTGGAAGGACGATACCAGTGGATTCGTCTGAAGCCATGAAAAACCAGCTAACTTCATGCTAAGACACGCCGGGATCTGGATTATCTCGGATTTCATGGAACTCTATCCTTTTGGAAAACTCTGTTAGTTTCTTCTTTTTGTACAGCTTCCATCTCCACAAAAGAAGCTCCGGAACTAAATCTTTTCAGTAAATGCACACTGCACACACACACACACACACCCATAGAAAGGAAACCGCCGCCGCCGCCGCCGCCGCCGCCGCCGTCCTTCTTTTATCATTTTCTTTCATGAACTCAAAGCTGTGTTATGTCGTGCATCCATAATTGAGCACAGATTTCTGTAATTCTCACTTCGAATTCACGACAAATGTTGGCCATGTTAAATCACACTTCGTTCTTTTGTCACTTTTTGAGGTTGCGTTTTGTGTAAGAAAAGTGTTTTTTGTTTGAATGTTCATTTTTCTGTGAAGAAAAAAAAGGAAACGTGTAATCTCC TATGATTATGAAGAAGTTGGAGGATTCGTATTTCCAAAAGCTGCCCAAAATCTTCGCAACGACTTCGTTAGAAGCAATAAACAAACTAGAAATCGCGCTTCGACGATTGACGAATCTCAACCGTTCAAACAACATTGCCGTCTCTCCGTCACCGTCGCCGTCGCCGGTTACCTTCGTAAGCGGCAACTACCTTTTCCCTTCTTCCTCACGGATAGCTCATCCATGAGACTTCTCTCGCTCTAGTTTTTTTTTCTCTCTCTAGAGATGGTTTGGGAGCGGCAATGAAAGCAGAGTTTGAGGTGGAGGTGGAGAGGCGATGGGTGATTGTAAGCGAGTTATGGTGAGGACGGCGGCGAGTAATGCTGGTTGGATGTCTAAGAGGAGGAGAATTGCCGGTTCGCCGGAGAGGTTGAGGCCGTCGACGTCTCAGTCTGACTTAAGCGACGGTTGTTTGTGGTTGGAGAATGCGACGACGTCTGTCTCGCGCTTGGAGAAGAGGAATTCCGTTGGCGTTGTCGCCGGAGGTGAGATGAGTGATGGTTTTTCAGCGGATCAGTTTCCTGTTTCTTGTAGCTCCGGTAACGACTGCGGCAAGGCCACCGGCCTGAAGGACGCCGTGAAATTCGAAGATCTGGAGCCGACCAAGAGCTTCGAAACCGTAGAGTCGACTCGCGTTAACGGCATTCAAAGAGAAAGCACTCCAACGAGCGATCTCCACGGAGAATCCGACGTAATGGACACACTAGCGAAGAGCTTCTTGACTGAGAAACAGAAGCGAACTGATCGTCCGATGAAGACGCCGCCGATTTTTGAGATTGAAGATTTCTTCGCCGAGGCGGAGAAGTACGAGCAGAAGCGCTTCTCAGAGAAGTACAACTTCGATATAGTGATGGATGTGCCATTGGAAGGACGATACCAGTGGATTCGTCTGAAGCCATGAAAAACCAGCTAACTTCATGCTAAGACACGCCGGGATCTGGATTATCTCGGATTTCATGGAACTCTATCCTTTTGGAAAACTCTGTTAGTTTCTTCTTTTTGTACAGCTTCCATCTCCACAAAAGAAGCTCCGGAACTAAATCTTTTCAGTAAATGCACACTGCACACACACACACACACACCCATAGAAAGGAAACCGCCGCCGCCGCCGCCGCCGCCGCCGCCGTCCTTCTTTTATCATTTTCTTTCATGAACTCAAAGCTGTGTTATGTCGTGCATCCATAATTGAGCACAGATTTCTGTAATTCTCACTTCGAATTCACGACAAATGTTGGCCATGTTAAATCACACTTCGTTCTTTTGTCACTTTTTGAGGTTGCGTTTTGTGTAAGAAAAGTGTTTTTTGTTTGAATGTTCATTTTTCTGTGAAGAAAAAAAAGGAAACGTGTAATCTCC ATGGGTGATTGTAAGCGAGTTATGGTGAGGACGGCGGCGAGTAATGCTGGTTGGATGTCTAAGAGGAGGAGAATTGCCGGTTCGCCGGAGAGGTTGAGGCCGTCGACGTCTCAGTCTGACTTAAGCGACGGTTGTTTGTGGTTGGAGAATGCGACGACGTCTGTCTCGCGCTTGGAGAAGAGGAATTCCGTTGGCGTTGTCGCCGGAGGTGAGATGAGTGATGGTTTTTCAGCGGATCAGTTTCCTGTTTCTTGTAGCTCCGGTAACGACTGCGGCAAGGCCACCGGCCTGAAGGACGCCGTGAAATTCGAAGATCTGGAGCCGACCAAGAGCTTCGAAACCGTAGAGTCGACTCGCGTTAACGGCATTCAAAGAGAAAGCACTCCAACGAGCGATCTCCACGGAGAATCCGACGTAATGGACACACTAGCGAAGAGCTTCTTGACTGAGAAACAGAAGCGAACTGATCGTCCGATGAAGACGCCGCCGATTTTTGAGATTGAAGATTTCTTCGCCGAGGCGGAGAAGTACGAGCAGAAGCGCTTCTCAGAGAAGTACAACTTCGATATAGTGATGGATGTGCCATTGGAAGGACGATACCAGTGGATTCGTCTGAAGCCATGA MGDCKRVMVRTAASNAGWMSKRRRIAGSPERLRPSTSQSDLSDGCLWLENATTSVSRLEKRNSVGVVAGGEMSDGFSADQFPVSCSSGNDCGKATGLKDAVKFEDLEPTKSFETVESTRVNGIQRESTPTSDLHGESDVMDTLAKSFLTEKQKRTDRPMKTPPIFEIEDFFAEAEKYEQKRFSEKYNFDIVMDVPLEGRYQWIRLKP
BLAST of Cp4.1LG04g08110 vs. Swiss-Prot
Match: KRP7_ARATH (Cyclin-dependent kinase inhibitor 7 OS=Arabidopsis thaliana GN=KRP7 PE=1 SV=2) HSP 1 Score: 95.1 bits (235), Expect = 9.4e-19 Identity = 53/131 (40.46%), Postives = 77/131 (58.78%), Query Frame = 1
BLAST of Cp4.1LG04g08110 vs. Swiss-Prot
Match: KRP3_ARATH (Cyclin-dependent kinase inhibitor 3 OS=Arabidopsis thaliana GN=KRP3 PE=1 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.5e-11 Identity = 68/223 (30.49%), Postives = 108/223 (48.43%), Query Frame = 1
BLAST of Cp4.1LG04g08110 vs. Swiss-Prot
Match: KRP6_ARATH (Cyclin-dependent kinase inhibitor 6 OS=Arabidopsis thaliana GN=KRP6 PE=1 SV=2) HSP 1 Score: 67.0 bits (162), Expect = 2.7e-10 Identity = 65/208 (31.25%), Postives = 100/208 (48.08%), Query Frame = 1
BLAST of Cp4.1LG04g08110 vs. Swiss-Prot
Match: KRP1_ORYSJ (Cyclin-dependent kinase inhibitor 1 OS=Oryza sativa subsp. japonica GN=KRP1 PE=2 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 6.1e-10 Identity = 43/90 (47.78%), Postives = 55/90 (61.11%), Query Frame = 1
BLAST of Cp4.1LG04g08110 vs. Swiss-Prot
Match: KRP1_ORYSI (Cyclin-dependent kinase inhibitor 1 OS=Oryza sativa subsp. indica GN=KRP1 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 6.1e-10 Identity = 43/90 (47.78%), Postives = 55/90 (61.11%), Query Frame = 1
BLAST of Cp4.1LG04g08110 vs. TrEMBL
Match: A0A0A0K2P3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073750 PE=4 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 1.3e-86 Identity = 166/208 (79.81%), Postives = 181/208 (87.02%), Query Frame = 1
BLAST of Cp4.1LG04g08110 vs. TrEMBL
Match: A0A0D2S7Z4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G042600 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 4.5e-28 Identity = 92/218 (42.20%), Postives = 119/218 (54.59%), Query Frame = 1
BLAST of Cp4.1LG04g08110 vs. TrEMBL
Match: A0A0D2TUL6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G042600 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 2.3e-27 Identity = 92/224 (41.07%), Postives = 119/224 (53.12%), Query Frame = 1
BLAST of Cp4.1LG04g08110 vs. TrEMBL
Match: A0A0D2S800_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G042600 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 5.0e-27 Identity = 91/217 (41.94%), Postives = 119/217 (54.84%), Query Frame = 1
BLAST of Cp4.1LG04g08110 vs. TrEMBL
Match: F6HQC4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g00670 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 9.5e-26 Identity = 82/201 (40.80%), Postives = 116/201 (57.71%), Query Frame = 1
BLAST of Cp4.1LG04g08110 vs. TAIR10
Match: AT1G49620.1 (AT1G49620.1 Cyclin-dependent kinase inhibitor family protein) HSP 1 Score: 95.1 bits (235), Expect = 5.3e-20 Identity = 53/131 (40.46%), Postives = 77/131 (58.78%), Query Frame = 1
BLAST of Cp4.1LG04g08110 vs. TAIR10
Match: AT5G48820.2 (AT5G48820.2 inhibitor/interactor with cyclin-dependent kinase) HSP 1 Score: 67.4 bits (163), Expect = 1.2e-11 Identity = 36/87 (41.38%), Postives = 55/87 (63.22%), Query Frame = 1
BLAST of Cp4.1LG04g08110 vs. TAIR10
Match: AT3G19150.1 (AT3G19150.1 KIP-related protein 6) HSP 1 Score: 67.0 bits (162), Expect = 1.5e-11 Identity = 65/208 (31.25%), Postives = 100/208 (48.08%), Query Frame = 1
BLAST of Cp4.1LG04g08110 vs. TAIR10
Match: AT2G23430.1 (AT2G23430.1 Cyclin-dependent kinase inhibitor family protein) HSP 1 Score: 62.8 bits (151), Expect = 2.9e-10 Identity = 53/175 (30.29%), Postives = 79/175 (45.14%), Query Frame = 1
BLAST of Cp4.1LG04g08110 vs. TAIR10
Match: AT3G24810.1 (AT3G24810.1 Cyclin-dependent kinase inhibitor family protein) HSP 1 Score: 62.4 bits (150), Expect = 3.8e-10 Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = 1
BLAST of Cp4.1LG04g08110 vs. NCBI nr
Match: gi|778725142|ref|XP_011658906.1| (PREDICTED: cyclin-dependent kinase inhibitor 7 isoform X2 [Cucumis sativus]) HSP 1 Score: 327.8 bits (839), Expect = 1.4e-86 Identity = 166/207 (80.19%), Postives = 181/207 (87.44%), Query Frame = 1
BLAST of Cp4.1LG04g08110 vs. NCBI nr
Match: gi|449438418|ref|XP_004136985.1| (PREDICTED: cyclin-dependent kinase inhibitor 7 isoform X3 [Cucumis sativus]) HSP 1 Score: 327.4 bits (838), Expect = 1.8e-86 Identity = 166/208 (79.81%), Postives = 181/208 (87.02%), Query Frame = 1
BLAST of Cp4.1LG04g08110 vs. NCBI nr
Match: gi|700188707|gb|KGN43940.1| (hypothetical protein Csa_7G073750 [Cucumis sativus]) HSP 1 Score: 327.4 bits (838), Expect = 1.8e-86 Identity = 166/208 (79.81%), Postives = 181/208 (87.02%), Query Frame = 1
BLAST of Cp4.1LG04g08110 vs. NCBI nr
Match: gi|778725138|ref|XP_011658905.1| (PREDICTED: cyclin-dependent kinase inhibitor 7 isoform X1 [Cucumis sativus]) HSP 1 Score: 327.4 bits (838), Expect = 1.8e-86 Identity = 166/208 (79.81%), Postives = 181/208 (87.02%), Query Frame = 1
BLAST of Cp4.1LG04g08110 vs. NCBI nr
Match: gi|659109895|ref|XP_008454937.1| (PREDICTED: cyclin-dependent kinase inhibitor 7 isoform X2 [Cucumis melo]) HSP 1 Score: 325.9 bits (834), Expect = 5.2e-86 Identity = 166/207 (80.19%), Postives = 182/207 (87.92%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|