CmoCh19G006300 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh19G006300
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCyclin-dependent kinase inhibitor family protein, putative
LocationCmo_Chr19 : 6862480 .. 6863990 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAGCAATGAACAAAGATTGCCGCGTCGGAGATTGACGATTTTCATCCGTTGAAACAGGATCGCCGGCTCTCCGTCACCGTCGTCGGTAACCATCATAAGCGGCAACCACTTCCCCGCTTTCTTGTCGGATCTCTGATCCTTAAGCCTTCTCTTGCTTTATTTTTGTTTTTCTCTCTCTAGAAATGGTTTTGGAGAGGCCATGAAAGCAGAGTTCGAGTTGGAGGTGGAAACGTCGATGGTCGACTGTAAGCGAGTTGCGGTGATGACGGCGGCGAATAATGCTGGTTGCATGTCTAAGAGGAGGAGAATTTCCGGTTCGCCGGAGAGATTGCGGCCGTCGGCGTCTCGGTCTGACCTTGGAGACCGTTGTTTGTGGTTGGAGAATGCGACAACGTCTCTGTCGCGTTTGGAGAAGAAGAATTCCCTTGACATTGTCGCCGGAGGTGAGATGAGGTATGGCTTTTCAGAGGATCAGTTTCCGGTTTCTTGTAGCTCCAGTGATGACTGCGGGAAGGCCACCGTCGAGAAATTCGAAGATCTGGAGGTGAGTTTCCAATTCTTGGTTGAGGAGAGTTTACCTCTCTGTTTGTTTGGAATTTGGTTTTTAATTTTGAGTTTCTCTGTTCTTCGGTTAGCGAGAAAATGGAGGAGAAGAACAAAAAGTATCATTAAATTTAACCAGTTCATAAATCATGTTTTCTATATTCTCAGTTGAAATTGAATTTAGATGAATTGTTCTTCATATTACCGCGATTTTTTCCTGCAAAAAATTTCAGTTCGTGATTTGTTCGTTTCTTCATCGTTTAATTCAGTTCAGTTCTACTCATAAAATTAGGACCGTTTCTACAAAATGTTTGTTAAGAATTCAAGTCTGTATGTATTTTTTATCGTATTTATTGAAATTTATCTTCAATGCGCCATAGCTGCAGACCAAGAGCTTCGAAACCGTAGAGTCGATTCCTGTTAACGACATTGAAAGGTTCATTGCACTTTACTATTTTCCTTTAATTTCCTCTAACGAAACGAATTCTGAAACGCTTCATCTCTCTTTCGCCATTTCTCACTCTGTTTAATGTTTAATTTCTGTTTCTTTCTTCTTCTTTTAGTTATAATTATAATTTGAATCTCTTCAGAGAGAGCACTCCAACGAGCAATCTCCACGGAGATTCAGACGAAATGGACTCTCCGGCGACGAACTTCTTGACTGACAAACAGAAACCACCGGATCGTCCGAAGACGCCGCCGATTTCTGAGATCGAAGATTTCTTCGCTGAGGCCGAGAAGTACGAACAGAAGCGTTTCTCAGAGAAGTGAGTACAATTTCTCCACGCGCATGATAACCATCTCTGATTCCGCGCATTTTAGCCGAACCAAAACCTAACTAACTTTCAACTTCTTCTTCGTTAATCGATTCAATTTTTCTCGTTCGTCTTGTTCAGGTACAACTTCGATATAGTAATGGATGTGCCGTTGGAAGGCCGATACCAATGGATTCGCCTGAAGCCATGA

mRNA sequence

CCAAGCAATGAACAAAGATTGCCGCGTCGGAGATTGACGATTTTCATCCGTTGAAACAGGATCGCCGGCTCTCCGTCACCGTCGTCGGTAACCATCATAAGCGGCAACCACTTCCCCGCTTTCTTGTCGGATCTCTGATCCTTAAGCCTTCTCTTGCTTTATTTTTGTTTTTCTCTCTCTAGAAATGGTTTTGGAGAGGCCATGAAAGCAGAGTTCGAGTTGGAGGTGGAAACGTCGATGGTCGACTGTAAGCGAGTTGCGGTGATGACGGCGGCGAATAATGCTGGTTGCATGTCTAAGAGGAGGAGAATTTCCGGTTCGCCGGAGAGATTGCGGCCGTCGGCGTCTCGGTCTGACCTTGGAGACCGTTGTTTGTGGTTGGAGAATGCGACAACGTCTCTGTCGCGTTTGGAGAAGAAGAATTCCCTTGACATTGTCGCCGGAGGTGAGATGAGGTATGGCTTTTCAGAGGATCAGTTTCCGGTTTCTTGTAGCTCCAGTGATGACTGCGGGAAGGCCACCGTCGAGAAATTCGAAGATCTGGAGCTGCAGACCAAGAGCTTCGAAACCGTAGAGTCGATTCCTGTTAACGACATTGAAAGTTATAATTATAATTTGAATCTCTTCAGAGAGAGCACTCCAACGAGCAATCTCCACGGAGATTCAGACGAAATGGACTCTCCGGCGACGAACTTCTTGACTGACAAACAGAAACCACCGGATCGTCCGAAGACGCCGCCGATTTCTGAGATCGAAGATTTCTTCGCTGAGGCCGAGAAGTACGAACAGAAGCGTTTCTCAGAGAAGTACAACTTCGATATAGTAATGGATGTGCCGTTGGAAGGCCGATACCAATGGATTCGCCTGAAGCCATGA

Coding sequence (CDS)

ATGAAAGCAGAGTTCGAGTTGGAGGTGGAAACGTCGATGGTCGACTGTAAGCGAGTTGCGGTGATGACGGCGGCGAATAATGCTGGTTGCATGTCTAAGAGGAGGAGAATTTCCGGTTCGCCGGAGAGATTGCGGCCGTCGGCGTCTCGGTCTGACCTTGGAGACCGTTGTTTGTGGTTGGAGAATGCGACAACGTCTCTGTCGCGTTTGGAGAAGAAGAATTCCCTTGACATTGTCGCCGGAGGTGAGATGAGGTATGGCTTTTCAGAGGATCAGTTTCCGGTTTCTTGTAGCTCCAGTGATGACTGCGGGAAGGCCACCGTCGAGAAATTCGAAGATCTGGAGCTGCAGACCAAGAGCTTCGAAACCGTAGAGTCGATTCCTGTTAACGACATTGAAAGTTATAATTATAATTTGAATCTCTTCAGAGAGAGCACTCCAACGAGCAATCTCCACGGAGATTCAGACGAAATGGACTCTCCGGCGACGAACTTCTTGACTGACAAACAGAAACCACCGGATCGTCCGAAGACGCCGCCGATTTCTGAGATCGAAGATTTCTTCGCTGAGGCCGAGAAGTACGAACAGAAGCGTTTCTCAGAGAAGTACAACTTCGATATAGTAATGGATGTGCCGTTGGAAGGCCGATACCAATGGATTCGCCTGAAGCCATGA
Homology
[Close]
BLAST of CmoCh19G006300 vs. Swiss-Prot
Match: KRP7_ARATH (Cyclin-dependent kinase inhibitor 7 OS=Arabidopsis thaliana GN=KRP7 PE=1 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-17
Identity = 54/130 (41.54%), Postives = 74/130 (56.92%), Query Frame = 1 

Query: 97  CSSSDDCGKATVEKFEDLELQTKSFETVESIPVNDIESYNYNLNLFRESTPTSNLHGDSD 156
           CSSS+    AT   F DLE    S   + ++  N         N  ++   +S   G++ 
Sbjct: 75  CSSSETNEIATRLPFSDLEAHEISETEISTLLTN---------NFRKQGISSSENLGETA 134

Query: 157 EMDSPATNFLTDK--QKPPDRPKTPPISEIEDFFAEAEKYEQKRFSEKYNFDIVMDVPLE 216
           EMDS  T     +  +K     K+P  +E++DFF+ AE+YEQKRF+EKYN+DIV D PLE
Sbjct: 135 EMDSATTEMRDQRKTEKKKKMEKSPTQAELDDFFSAAERYEQKRFTEKYNYDIVNDTPLE 194

Query: 217 GRYQWIRLKP 225
           GRYQW+ LKP
Sbjct: 195 GRYQWVSLKP 195

[Close]
BLAST of CmoCh19G006300 vs. Swiss-Prot
Match: KRP1_ORYSI (Cyclin-dependent kinase inhibitor 1 OS=Oryza sativa subsp. indica GN=KRP1 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.0e-10
Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 1 

Query: 143 RESTPTSNLHGDSDEMDS----------PATNFLTDKQKPPDRPKTPPISEIEDFFAEAE 202
           RE+TP+S L G+  +++S          P  +  T   +   RPK PP +EIE FFA AE
Sbjct: 167 RETTPSSFLPGEVSDLESDLAGGQKRSRPLPSAATASAQQATRPKIPPAAEIEAFFAAAE 226

Query: 203 KYEQKRFSEKYNFDIVMDVPLE-GRYQW 220
           + E KRF+ KYNFD+V  VPL+ GR++W
Sbjct: 227 EAEAKRFAAKYNFDVVRGVPLDAGRFEW 254

[Close]
BLAST of CmoCh19G006300 vs. Swiss-Prot
Match: KRP1_ORYSJ (Cyclin-dependent kinase inhibitor 1 OS=Oryza sativa subsp. japonica GN=KRP1 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.0e-10
Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 1 

Query: 143 RESTPTSNLHGDSDEMDS----------PATNFLTDKQKPPDRPKTPPISEIEDFFAEAE 202
           RE+TP+S L G+  +++S          P  +  T   +   RPK PP +EIE FFA AE
Sbjct: 167 RETTPSSFLPGEVSDLESDLAGGQKRSRPLPSAATASAQQATRPKIPPAAEIEAFFAAAE 226

Query: 203 KYEQKRFSEKYNFDIVMDVPLE-GRYQW 220
           + E KRF+ KYNFD+V  VPL+ GR++W
Sbjct: 227 EAEAKRFAAKYNFDVVRGVPLDAGRFEW 254

[Close]
BLAST of CmoCh19G006300 vs. Swiss-Prot
Match: KRP3_ARATH (Cyclin-dependent kinase inhibitor 3 OS=Arabidopsis thaliana GN=KRP3 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.3e-10
Identity = 40/87 (45.98%), Postives = 55/87 (63.22%), Query Frame = 1 

Query: 143 RESTPTSNLHGDSDEMDSP--ATNFLTDKQKPPDRPKT---PPISEIEDFFAEAEKYEQK 202
           RESTP  N   D + M +P  +T  +    K   R +    P  SE+E+FFA AE+ +Q+
Sbjct: 137 RESTPC-NFVEDMEIMVTPGSSTRSMCRATKEYTREQDNVIPTTSEMEEFFAYAEQQQQR 196

Query: 203 RFSEKYNFDIVMDVPLEGRYQWIRLKP 225
            F EKYNFDIV D+PL GRY+W+++KP
Sbjct: 197 LFMEKYNFDIVNDIPLSGRYEWVQVKP 222

[Close]
BLAST of CmoCh19G006300 vs. Swiss-Prot
Match: KRP6_ARATH (Cyclin-dependent kinase inhibitor 6 OS=Arabidopsis thaliana GN=KRP6 PE=1 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 3.9e-10
Identity = 41/86 (47.67%), Postives = 55/86 (63.95%), Query Frame = 1 

Query: 140 NLFRESTPTSNLHGDSD-EMDSPATNFLTDKQKPPDRPKTPPISEIEDFFAEAEKYE--Q 199
           N  +E++P S   G++  EM+S +      K+K P   KTP  +EIED F+E E  +  +
Sbjct: 115 NFRKETSPVSEGLGETTTEMESSSAT----KRKQPGVRKTPTAAEIEDLFSELESQDDKK 174

Query: 200 KRFSEKYNFDIVMDVPLEGRYQWIRL 223
           K+F EKYNFDIV D PLEGRY+W RL
Sbjct: 175 KQFIEKYNFDIVNDEPLEGRYKWDRL 196

[Close]
BLAST of CmoCh19G006300 vs. TrEMBL
Match: A0A0A0K2P3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073750 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.9e-88
Identity = 178/221 (80.54%), Postives = 187/221 (84.62%), Query Frame = 1 

Query: 9   VETSMVDCKRVAVMTAANNAGCMSKRRRISGSPERLRPSASRSDLGDRCLWLENATTSLS 68
           VET+M DCKRV VMT ANNAGCMSKRRRI+GS E LRPSASRSDL DRCLWLENATTSLS
Sbjct: 88  VETTMDDCKRVVVMTTANNAGCMSKRRRIAGSSESLRPSASRSDLDDRCLWLENATTSLS 147

Query: 69  RLEKKNSLDIVAGGEMRYGFSEDQFPVSCSSSDDCGKATVEK----FEDLELQTKSFETV 128
           RLE KNS+ I+AGGEM  GFSEDQFPVSC  S+DC KAT  K    FEDLELQTKSFETV
Sbjct: 148 RLENKNSIGIIAGGEMSDGFSEDQFPVSCCFSNDCRKATAVKDAGRFEDLELQTKSFETV 207

Query: 129 ESIPVNDIESYNYNLNLFRESTPTSNLHGDSDEMDSPATNFLTDKQKPPDRP-KTPPISE 188
           ESI VN I+         RESTPTSNL GDSDEMDSPAT FLT+KQKP DRP KTPPISE
Sbjct: 208 ESIRVNGIQ---------RESTPTSNLMGDSDEMDSPATIFLTEKQKPTDRPMKTPPISE 267

Query: 189 IEDFFAEAEKYEQKRFSEKYNFDIVMDVPLEGRYQWIRLKP 225
           IEDFF+EAEKYEQKRFSEKYNFDI+MDVPLEGRYQWIRLKP
Sbjct: 268 IEDFFSEAEKYEQKRFSEKYNFDIIMDVPLEGRYQWIRLKP 299

[Close]
BLAST of CmoCh19G006300 vs. TrEMBL
Match: A0A0D2S800_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G042600 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.7e-26
Identity = 88/220 (40.00%), Postives = 120/220 (54.55%), Query Frame = 1 

Query: 13  MVDCKR---VAVMTAANNAGCMSKRRRISGSPE--RLRPSASRSDLGDRCLWLENATTSL 72
           M +CKR    A M A++ +  +SKRR+  GS E   L  ++   +LG   +   +    +
Sbjct: 5   MRNCKRSAEAAEMEASSTSFSLSKRRKTVGSRELQELELTSPDIELGTTRILSNSLNKPI 64

Query: 73  SRLEKKNSLDIVAGGEMRYGFSEDQFPVSCSSSDDCGKATVEKFEDLELQTKSFETVESI 132
                  S  ++AG      FS D     CSS++ C     +    ++L+ KSFET  S 
Sbjct: 65  YLATSSGSCGVLAGDMCSGLFSGDSSASRCSSNESCD-ILKDSLRFVDLEAKSFETEIST 124

Query: 133 PVNDIESYNYNLNLFRESTPTSNLHGDSDEMDSPATNFLTDKQKPPDR---PKTPPISEI 192
             N        +N FRE+ P S   GDSDEM SP      +K+ PP     PK P  +EI
Sbjct: 125 CTN--------VNKFRETPPLSEHCGDSDEMQSP------EKKPPPSTTKPPKIPSQAEI 184

Query: 193 EDFFAEAEKYEQKRFSEKYNFDIVMDVPLEGRYQWIRLKP 225
           ++FF+ AEKYEQKRF+EKYN+DIV DVPL+GRYQW+RLKP
Sbjct: 185 DEFFSVAEKYEQKRFAEKYNYDIVKDVPLDGRYQWLRLKP 209

[Close]
BLAST of CmoCh19G006300 vs. TrEMBL
Match: A0A0D2TUL6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G042600 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.9e-25
Identity = 92/227 (40.53%), Postives = 121/227 (53.30%), Query Frame = 1 

Query: 13  MVDCKR---VAVMTAANNAGCMSKRRRISGSPE--RLRPSASRSDLGDRCLWLENATTSL 72
           M +CKR    A M A++ +  +SKRR+  GS E   L  ++   +LG   +   +    +
Sbjct: 5   MRNCKRSAEAAEMEASSTSFSLSKRRKTVGSRELQELELTSPDIELGTTRILSNSLNKPI 64

Query: 73  SRLEKKNSLDIVAGGEMRYGFSEDQFPVSCSSSDDCGKATVE-KFEDLE-----LQTKSF 132
                  S  ++AG      FS D     CSS++ C       +F DLE     LQ KSF
Sbjct: 65  YLATSSGSCGVLAGDMCSGLFSGDSSASRCSSNESCDILKDSLRFVDLEFMNVPLQAKSF 124

Query: 133 ETVESIPVNDIESYNYNLNLFRESTPTSNLH-GDSDEMDSPATNFLTDKQKPPDR---PK 192
           ET  S   N        +N F   TP  + H GDSDEM SP      +K+ PP     PK
Sbjct: 125 ETEISTCTN--------VNKFSRETPPLSEHCGDSDEMQSP------EKKPPPSTTKPPK 184

Query: 193 TPPISEIEDFFAEAEKYEQKRFSEKYNFDIVMDVPLEGRYQWIRLKP 225
            P  +EI++FF+ AEKYEQKRF+EKYN+DIV DVPL+GRYQW+RLKP
Sbjct: 185 IPSQAEIDEFFSVAEKYEQKRFAEKYNYDIVKDVPLDGRYQWLRLKP 217

[Close]
BLAST of CmoCh19G006300 vs. TrEMBL
Match: A0A0D2S7Z4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G042600 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 6.6e-25
Identity = 87/221 (39.37%), Postives = 119/221 (53.85%), Query Frame = 1 

Query: 13  MVDCKR---VAVMTAANNAGCMSKRRRISGSPE--RLRPSASRSDLGDRCLWLENATTSL 72
           M +CKR    A M A++ +  +SKRR+  GS E   L  ++   +LG   +   +    +
Sbjct: 5   MRNCKRSAEAAEMEASSTSFSLSKRRKTVGSRELQELELTSPDIELGTTRILSNSLNKPI 64

Query: 73  SRLEKKNSLDIVAGGEMRYGFSEDQFPVSCSSSDDCGKATVEKFEDLELQTKSFETVESI 132
                  S  ++AG      FS D     CSS++ C     +    ++L+ KSFET  S 
Sbjct: 65  YLATSSGSCGVLAGDMCSGLFSGDSSASRCSSNESCD-ILKDSLRFVDLEAKSFETEIST 124

Query: 133 PVNDIESYNYNLNLFRESTPTSNLH-GDSDEMDSPATNFLTDKQKPPDR---PKTPPISE 192
             N        +N F   TP  + H GDSDEM SP      +K+ PP     PK P  +E
Sbjct: 125 CTN--------VNKFSRETPPLSEHCGDSDEMQSP------EKKPPPSTTKPPKIPSQAE 184

Query: 193 IEDFFAEAEKYEQKRFSEKYNFDIVMDVPLEGRYQWIRLKP 225
           I++FF+ AEKYEQKRF+EKYN+DIV DVPL+GRYQW+RLKP
Sbjct: 185 IDEFFSVAEKYEQKRFAEKYNYDIVKDVPLDGRYQWLRLKP 210

[Close]
BLAST of CmoCh19G006300 vs. TrEMBL
Match: A0A061DZV5_THECC (Cyclin-dependent kinase inhibitor family protein, putative OS=Theobroma cacao GN=TCM_007033 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.3e-24
Identity = 87/221 (39.37%), Postives = 121/221 (54.75%), Query Frame = 1 

Query: 13  MVDCKR---VAVMTAANNAGCMSKRRRISGSPERLRPSASRSDLG-DRCLWLENATTSLS 72
           M  CKR    A M A++ +  +SKRR+   S E      +  D+  +   +L N+     
Sbjct: 5   MRSCKRSAETAEMEASSTSFSLSKRRKTVDSRELQEFELTSPDIELENPHFLSNSQDKPI 64

Query: 73  RLEKKNSLDIVAGGEMRYGFSEDQFPVS-CSSSDDCGKATVEKFEDLELQTKSFETVESI 132
            +   ++   V  G+M   F   +   S CSS++ C     +    ++L+ KSFET  S 
Sbjct: 65  TVATSSNSGGVLAGDMCSSFCSGESSASRCSSNESCDIVN-DSLRFVDLEAKSFETEIST 124

Query: 133 PVNDIESYNYNLNLF-RESTPTSNLHGDSDEMDSPATNFLTDKQKPPDR---PKTPPISE 192
            +N        +N F RE+TP S L GDSDEM+SP      +K+ PP     PK P   E
Sbjct: 125 CIN--------INKFSRETTPLSELCGDSDEMESP------EKKPPPSPAKPPKKPSQEE 184

Query: 193 IEDFFAEAEKYEQKRFSEKYNFDIVMDVPLEGRYQWIRLKP 225
           I++FF+ AEKYEQKRF+EKYN+DIV DVPL+GRYQW+RL P
Sbjct: 185 IDEFFSFAEKYEQKRFAEKYNYDIVKDVPLDGRYQWVRLMP 210

[Close]
BLAST of CmoCh19G006300 vs. TAIR10
Match: AT1G49620.1 (AT1G49620.1 Cyclin-dependent kinase inhibitor family protein)

HSP 1 Score: 91.3 bits (225), Expect = 8.3e-19
Identity = 54/130 (41.54%), Postives = 74/130 (56.92%), Query Frame = 1 

Query: 97  CSSSDDCGKATVEKFEDLELQTKSFETVESIPVNDIESYNYNLNLFRESTPTSNLHGDSD 156
           CSSS+    AT   F DLE    S   + ++  N         N  ++   +S   G++ 
Sbjct: 75  CSSSETNEIATRLPFSDLEAHEISETEISTLLTN---------NFRKQGISSSENLGETA 134

Query: 157 EMDSPATNFLTDK--QKPPDRPKTPPISEIEDFFAEAEKYEQKRFSEKYNFDIVMDVPLE 216
           EMDS  T     +  +K     K+P  +E++DFF+ AE+YEQKRF+EKYN+DIV D PLE
Sbjct: 135 EMDSATTEMRDQRKTEKKKKMEKSPTQAELDDFFSAAERYEQKRFTEKYNYDIVNDTPLE 194

Query: 217 GRYQWIRLKP 225
           GRYQW+ LKP
Sbjct: 195 GRYQWVSLKP 195

[Close]
BLAST of CmoCh19G006300 vs. TAIR10
Match: AT5G48820.2 (AT5G48820.2 inhibitor/interactor with cyclin-dependent kinase)

HSP 1 Score: 67.4 bits (163), Expect = 1.3e-11
Identity = 40/87 (45.98%), Postives = 55/87 (63.22%), Query Frame = 1 

Query: 143 RESTPTSNLHGDSDEMDSP--ATNFLTDKQKPPDRPKT---PPISEIEDFFAEAEKYEQK 202
           RESTP  N   D + M +P  +T  +    K   R +    P  SE+E+FFA AE+ +Q+
Sbjct: 155 RESTPC-NFVEDMEIMVTPGSSTRSMCRATKEYTREQDNVIPTTSEMEEFFAYAEQQQQR 214

Query: 203 RFSEKYNFDIVMDVPLEGRYQWIRLKP 225
            F EKYNFDIV D+PL GRY+W+++KP
Sbjct: 215 LFMEKYNFDIVNDIPLSGRYEWVQVKP 240

[Close]
BLAST of CmoCh19G006300 vs. TAIR10
Match: AT3G19150.1 (AT3G19150.1 KIP-related protein 6)

HSP 1 Score: 66.6 bits (161), Expect = 2.2e-11
Identity = 41/86 (47.67%), Postives = 55/86 (63.95%), Query Frame = 1 

Query: 140 NLFRESTPTSNLHGDSD-EMDSPATNFLTDKQKPPDRPKTPPISEIEDFFAEAEKYE--Q 199
           N  +E++P S   G++  EM+S +      K+K P   KTP  +EIED F+E E  +  +
Sbjct: 115 NFRKETSPVSEGLGETTTEMESSSAT----KRKQPGVRKTPTAAEIEDLFSELESQDDKK 174

Query: 200 KRFSEKYNFDIVMDVPLEGRYQWIRL 223
           K+F EKYNFDIV D PLEGRY+W RL
Sbjct: 175 KQFIEKYNFDIVNDEPLEGRYKWDRL 196

[Close]
BLAST of CmoCh19G006300 vs. TAIR10
Match: AT3G24810.1 (AT3G24810.1 Cyclin-dependent kinase inhibitor family protein)

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09
Identity = 34/85 (40.00%), Postives = 47/85 (55.29%), Query Frame = 1 

Query: 146 TPTSNLHGDSDEMDSPATNF------LTDKQKPPDRPKTPPISEIEDFFAEAEKYEQKRF 205
           T T    GD++ +     NF      L  + +          SEIEDFFA AE+ +Q+ F
Sbjct: 105 TTTEEACGDNERISRSDCNFGDKGFDLESENRSMISDSKSIQSEIEDFFASAEQQQQRFF 164

Query: 206 SEKYNFDIVMDVPLEGRYQWIRLKP 225
            +KYNFDIV D PL GRY+W+++ P
Sbjct: 165 IQKYNFDIVSDNPLPGRYEWVKVMP 189

[Close]
BLAST of CmoCh19G006300 vs. TAIR10
Match: AT2G23430.1 (AT2G23430.1 Cyclin-dependent kinase inhibitor family protein)

HSP 1 Score: 57.8 bits (138), Expect = 1.0e-08
Identity = 52/169 (30.77%), Postives = 77/169 (45.56%), Query Frame = 1 

Query: 69  RLEKKNSLDIVAGGEMRYGFSEDQFPVSCSSSDDCGKATV------EKFEDLELQT---- 128
           R EK +S+ +V       G S      SCS S++  K  +      +K  D E  T    
Sbjct: 32  RSEKSSSVSVVGDN----GVSS-----SCSGSNEYKKKELIHLEEEDKDGDTETSTYRRG 91

Query: 129 ---KSFETVESIPVNDIESYNYNLNLFRESTPTSNLHGD-SDEMDSPATNFLTDKQKPPD 188
              K FE +      ++     N +   ES    +L    S       T    +++K   
Sbjct: 92  TKRKLFENLREEEKEELSKSMENYSSEFESAVKESLDCCCSGRKTMEETVTAEEEEKAKL 151

Query: 189 RPKTPPISEIEDFFAEAEKYEQKRFSEKYNFDIVMDVPLEGRYQWIRLK 224
             + P  SEIEDFF EAEK  +++F +KYNFD   + PLEGRY+W++L+
Sbjct: 152 MTEMPTESEIEDFFVEAEKQLKEKFKKKYNFDFEKEKPLEGRYEWVKLE 191

[Close]
BLAST of CmoCh19G006300 vs. NCBI nr
Match: gi|778725138|ref|XP_011658905.1| (PREDICTED: cyclin-dependent kinase inhibitor 7 isoform X1 [Cucumis sativus])

HSP 1 Score: 333.6 bits (854), Expect = 2.7e-88
Identity = 178/221 (80.54%), Postives = 187/221 (84.62%), Query Frame = 1 

Query: 9   VETSMVDCKRVAVMTAANNAGCMSKRRRISGSPERLRPSASRSDLGDRCLWLENATTSLS 68
           VET+M DCKRV VMT ANNAGCMSKRRRI+GS E LRPSASRSDL DRCLWLENATTSLS
Sbjct: 86  VETTMDDCKRVVVMTTANNAGCMSKRRRIAGSSESLRPSASRSDLDDRCLWLENATTSLS 145

Query: 69  RLEKKNSLDIVAGGEMRYGFSEDQFPVSCSSSDDCGKATVEK----FEDLELQTKSFETV 128
           RLE KNS+ I+AGGEM  GFSEDQFPVSC  S+DC KAT  K    FEDLELQTKSFETV
Sbjct: 146 RLENKNSIGIIAGGEMSDGFSEDQFPVSCCFSNDCRKATAVKDAGRFEDLELQTKSFETV 205

Query: 129 ESIPVNDIESYNYNLNLFRESTPTSNLHGDSDEMDSPATNFLTDKQKPPDRP-KTPPISE 188
           ESI VN I+         RESTPTSNL GDSDEMDSPAT FLT+KQKP DRP KTPPISE
Sbjct: 206 ESIRVNGIQ---------RESTPTSNLMGDSDEMDSPATIFLTEKQKPTDRPMKTPPISE 265

Query: 189 IEDFFAEAEKYEQKRFSEKYNFDIVMDVPLEGRYQWIRLKP 225
           IEDFF+EAEKYEQKRFSEKYNFDI+MDVPLEGRYQWIRLKP
Sbjct: 266 IEDFFSEAEKYEQKRFSEKYNFDIIMDVPLEGRYQWIRLKP 297

[Close]
BLAST of CmoCh19G006300 vs. NCBI nr
Match: gi|700188707|gb|KGN43940.1| (hypothetical protein Csa_7G073750 [Cucumis sativus])

HSP 1 Score: 333.6 bits (854), Expect = 2.7e-88
Identity = 178/221 (80.54%), Postives = 187/221 (84.62%), Query Frame = 1 

Query: 9   VETSMVDCKRVAVMTAANNAGCMSKRRRISGSPERLRPSASRSDLGDRCLWLENATTSLS 68
           VET+M DCKRV VMT ANNAGCMSKRRRI+GS E LRPSASRSDL DRCLWLENATTSLS
Sbjct: 88  VETTMDDCKRVVVMTTANNAGCMSKRRRIAGSSESLRPSASRSDLDDRCLWLENATTSLS 147

Query: 69  RLEKKNSLDIVAGGEMRYGFSEDQFPVSCSSSDDCGKATVEK----FEDLELQTKSFETV 128
           RLE KNS+ I+AGGEM  GFSEDQFPVSC  S+DC KAT  K    FEDLELQTKSFETV
Sbjct: 148 RLENKNSIGIIAGGEMSDGFSEDQFPVSCCFSNDCRKATAVKDAGRFEDLELQTKSFETV 207

Query: 129 ESIPVNDIESYNYNLNLFRESTPTSNLHGDSDEMDSPATNFLTDKQKPPDRP-KTPPISE 188
           ESI VN I+         RESTPTSNL GDSDEMDSPAT FLT+KQKP DRP KTPPISE
Sbjct: 208 ESIRVNGIQ---------RESTPTSNLMGDSDEMDSPATIFLTEKQKPTDRPMKTPPISE 267

Query: 189 IEDFFAEAEKYEQKRFSEKYNFDIVMDVPLEGRYQWIRLKP 225
           IEDFF+EAEKYEQKRFSEKYNFDI+MDVPLEGRYQWIRLKP
Sbjct: 268 IEDFFSEAEKYEQKRFSEKYNFDIIMDVPLEGRYQWIRLKP 299

[Close]
BLAST of CmoCh19G006300 vs. NCBI nr
Match: gi|659109891|ref|XP_008454935.1| (PREDICTED: cyclin-dependent kinase inhibitor 7 isoform X1 [Cucumis melo])

HSP 1 Score: 329.3 bits (843), Expect = 5.1e-87
Identity = 177/217 (81.57%), Postives = 183/217 (84.33%), Query Frame = 1 

Query: 13  MVDCKRVAVMTAANNAGCMSKRRRISGSPERLRPSASRSDLGDRCLWLENATTSLSRLEK 72
           M DCKRV VMT ANNAGCMSKRRRI+GS E LRPSASRSDL DRCLWLENATTSL+RLE 
Sbjct: 1   MGDCKRVVVMTTANNAGCMSKRRRIAGSSESLRPSASRSDLDDRCLWLENATTSLARLEN 60

Query: 73  KNSLDIVAGGEMRYGFSEDQFPVSCSSSDDCGKATVEK----FEDLELQTKSFETVESIP 132
           KNSL IVAGGEM  GFSEDQFPVSCS S+DC KAT  K    FEDLELQTKSFETVESI 
Sbjct: 61  KNSLGIVAGGEMSNGFSEDQFPVSCSFSNDCRKATAVKDAGRFEDLELQTKSFETVESIR 120

Query: 133 VNDIESYNYNLNLFRESTPTSNLHGDSDEMDSPATNFLTDKQKPPD-RPKTPPISEIEDF 192
           VN I+         RESTPTSNL GDSDEMDSPATNFLT+KQKP D R K PPISEIEDF
Sbjct: 121 VNGIQ---------RESTPTSNLMGDSDEMDSPATNFLTEKQKPTDRRMKVPPISEIEDF 180

Query: 193 FAEAEKYEQKRFSEKYNFDIVMDVPLEGRYQWIRLKP 225
           FAEAEKYEQKRFSEKYNFDI+MDVPLEGRYQWIRLKP
Sbjct: 181 FAEAEKYEQKRFSEKYNFDIIMDVPLEGRYQWIRLKP 208

[Close]
BLAST of CmoCh19G006300 vs. NCBI nr
Match: gi|449438418|ref|XP_004136985.1| (PREDICTED: cyclin-dependent kinase inhibitor 7 isoform X3 [Cucumis sativus])

HSP 1 Score: 327.8 bits (839), Expect = 1.5e-86
Identity = 175/217 (80.65%), Postives = 183/217 (84.33%), Query Frame = 1 

Query: 13  MVDCKRVAVMTAANNAGCMSKRRRISGSPERLRPSASRSDLGDRCLWLENATTSLSRLEK 72
           M DCKRV VMT ANNAGCMSKRRRI+GS E LRPSASRSDL DRCLWLENATTSLSRLE 
Sbjct: 1   MDDCKRVVVMTTANNAGCMSKRRRIAGSSESLRPSASRSDLDDRCLWLENATTSLSRLEN 60

Query: 73  KNSLDIVAGGEMRYGFSEDQFPVSCSSSDDCGKATVEK----FEDLELQTKSFETVESIP 132
           KNS+ I+AGGEM  GFSEDQFPVSC  S+DC KAT  K    FEDLELQTKSFETVESI 
Sbjct: 61  KNSIGIIAGGEMSDGFSEDQFPVSCCFSNDCRKATAVKDAGRFEDLELQTKSFETVESIR 120

Query: 133 VNDIESYNYNLNLFRESTPTSNLHGDSDEMDSPATNFLTDKQKPPDRP-KTPPISEIEDF 192
           VN I+         RESTPTSNL GDSDEMDSPAT FLT+KQKP DRP KTPPISEIEDF
Sbjct: 121 VNGIQ---------RESTPTSNLMGDSDEMDSPATIFLTEKQKPTDRPMKTPPISEIEDF 180

Query: 193 FAEAEKYEQKRFSEKYNFDIVMDVPLEGRYQWIRLKP 225
           F+EAEKYEQKRFSEKYNFDI+MDVPLEGRYQWIRLKP
Sbjct: 181 FSEAEKYEQKRFSEKYNFDIIMDVPLEGRYQWIRLKP 208

[Close]
BLAST of CmoCh19G006300 vs. NCBI nr
Match: gi|778725142|ref|XP_011658906.1| (PREDICTED: cyclin-dependent kinase inhibitor 7 isoform X2 [Cucumis sativus])

HSP 1 Score: 324.7 bits (831), Expect = 1.3e-85
Identity = 176/221 (79.64%), Postives = 185/221 (83.71%), Query Frame = 1 

Query: 9   VETSMVDCKRVAVMTAANNAGCMSKRRRISGSPERLRPSASRSDLGDRCLWLENATTSLS 68
           VET+M DCKRV VMT ANNAGCMSKRRRI+GS E LRPSASRSDL DRCLWLENATTSLS
Sbjct: 86  VETTMDDCKRVVVMTTANNAGCMSKRRRIAGSSESLRPSASRSDLDDRCLWLENATTSLS 145

Query: 69  RLEKKNSLDIVAGGEMRYGFSEDQFPVSCSSSDDCGKATVEK----FEDLELQTKSFETV 128
           RLE KNS+ I+AGGEM  GFSEDQFPVSC  S+DC KAT  K    FEDLE  TKSFETV
Sbjct: 146 RLENKNSIGIIAGGEMSDGFSEDQFPVSCCFSNDCRKATAVKDAGRFEDLE--TKSFETV 205

Query: 129 ESIPVNDIESYNYNLNLFRESTPTSNLHGDSDEMDSPATNFLTDKQKPPDRP-KTPPISE 188
           ESI VN I+         RESTPTSNL GDSDEMDSPAT FLT+KQKP DRP KTPPISE
Sbjct: 206 ESIRVNGIQ---------RESTPTSNLMGDSDEMDSPATIFLTEKQKPTDRPMKTPPISE 265

Query: 189 IEDFFAEAEKYEQKRFSEKYNFDIVMDVPLEGRYQWIRLKP 225
           IEDFF+EAEKYEQKRFSEKYNFDI+MDVPLEGRYQWIRLKP
Sbjct: 266 IEDFFSEAEKYEQKRFSEKYNFDIIMDVPLEGRYQWIRLKP 295

The following BLAST results are available for this feature:
BLAST of CmoCh19G006300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
KRP7_ARATH1.5e-1741.54Cyclin-dependent kinase inhibitor 7 OS=Arabidopsis thaliana GN=KRP7 PE=1 SV=2[more]
KRP1_ORYSI1.0e-1044.32Cyclin-dependent kinase inhibitor 1 OS=Oryza sativa subsp. indica GN=KRP1 PE=3 S... [more]
KRP1_ORYSJ1.0e-1044.32Cyclin-dependent kinase inhibitor 1 OS=Oryza sativa subsp. japonica GN=KRP1 PE=2... [more]
KRP3_ARATH2.3e-1045.98Cyclin-dependent kinase inhibitor 3 OS=Arabidopsis thaliana GN=KRP3 PE=1 SV=1[more]
KRP6_ARATH3.9e-1047.67Cyclin-dependent kinase inhibitor 6 OS=Arabidopsis thaliana GN=KRP6 PE=1 SV=2[more]
BLAST of CmoCh19G006300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2P3_CUCSA1.9e-8880.54Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073750 PE=4 SV=1[more]
A0A0D2S800_GOSRA2.7e-2640.00Uncharacterized protein OS=Gossypium raimondii GN=B456_013G042600 PE=4 SV=1[more]
A0A0D2TUL6_GOSRA3.9e-2540.53Uncharacterized protein OS=Gossypium raimondii GN=B456_013G042600 PE=4 SV=1[more]
A0A0D2S7Z4_GOSRA6.6e-2539.37Uncharacterized protein OS=Gossypium raimondii GN=B456_013G042600 PE=4 SV=1[more]
A0A061DZV5_THECC7.3e-2439.37Cyclin-dependent kinase inhibitor family protein, putative OS=Theobroma cacao GN... [more]
BLAST of CmoCh19G006300 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G49620.18.3e-1941.54 Cyclin-dependent kinase inhibitor family protein[more]
AT5G48820.21.3e-1145.98 inhibitor/interactor with cyclin-dependent kinase[more]
AT3G19150.12.2e-1147.67 KIP-related protein 6[more]
AT3G24810.11.2e-0940.00 Cyclin-dependent kinase inhibitor family protein[more]
AT2G23430.11.0e-0830.77 Cyclin-dependent kinase inhibitor family protein[more]
BLAST of CmoCh19G006300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778725138|ref|XP_011658905.1|2.7e-8880.54PREDICTED: cyclin-dependent kinase inhibitor 7 isoform X1 [Cucumis sativus][more]
gi|700188707|gb|KGN43940.1|2.7e-8880.54hypothetical protein Csa_7G073750 [Cucumis sativus][more]
gi|659109891|ref|XP_008454935.1|5.1e-8781.57PREDICTED: cyclin-dependent kinase inhibitor 7 isoform X1 [Cucumis melo][more]
gi|449438418|ref|XP_004136985.1|1.5e-8680.65PREDICTED: cyclin-dependent kinase inhibitor 7 isoform X3 [Cucumis sativus][more]
gi|778725142|ref|XP_011658906.1|1.3e-8579.64PREDICTED: cyclin-dependent kinase inhibitor 7 isoform X2 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003175CDI
Vocabulary: Molecular Function
TermDefinition
GO:0004861cyclin-dependent protein serine/threonine kinase inhibitor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0007050cell cycle arrest
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007050 cell cycle arrest
biological_process GO:0071901 negative regulation of protein serine/threonine kinase activity
biological_process GO:0045859 regulation of protein kinase activity
cellular_component GO:0005634 nucleus
molecular_function GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity
molecular_function GO:0016301 kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh19G006300.1CmoCh19G006300.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003175Cyclin-dependent kinase inhibitorPANTHERPTHR10265CYCLIN-DEPENDENT KINASE INHIBITOR 1coord: 94..224
score: 2.6
IPR003175Cyclin-dependent kinase inhibitorPFAMPF02234CDIcoord: 179..221
score: 1.3
NoneNo IPR availableGENE3DG3DSA:4.10.365.10coord: 182..223
score: 2.0
NoneNo IPR availablePANTHERPTHR10265:SF22CYCLIN-DEPENDENT KINASE INHIBITOR 7coord: 94..224
score: 2.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh19G006300Cucsa.219940Cucumber (Gy14) v1cgycmoB0627
CmoCh19G006300CmaCh11G017580Cucurbita maxima (Rimu)cmacmoB143
CmoCh19G006300CmaCh19G006110Cucurbita maxima (Rimu)cmacmoB508
CmoCh19G006300Cla016004Watermelon (97103) v1cmowmB496
CmoCh19G006300Csa7G073750Cucumber (Chinese Long) v2cmocuB519
CmoCh19G006300MELO3C018442Melon (DHL92) v3.5.1cmomeB454
CmoCh19G006300ClCG02G005840Watermelon (Charleston Gray)cmowcgB459
CmoCh19G006300CSPI07G07720Wild cucumber (PI 183967)cmocpiB525
CmoCh19G006300Lsi03G004840Bottle gourd (USVL1VR-Ls)cmolsiB468
CmoCh19G006300Cp4.1LG15g04970Cucurbita pepo (Zucchini)cmocpeB481
CmoCh19G006300Cp4.1LG04g08110Cucurbita pepo (Zucchini)cmocpeB494
CmoCh19G006300MELO3C018442.2Melon (DHL92) v3.6.1cmomedB523
CmoCh19G006300CsaV3_7G008680Cucumber (Chinese Long) v3cmocucB0623
CmoCh19G006300Cla97C02G032830Watermelon (97103) v2cmowmbB512
CmoCh19G006300Bhi05G000999Wax gourdcmowgoB0641
CmoCh19G006300CsGy7G007280Cucumber (Gy14) v2cgybcmoB928
CmoCh19G006300Carg20370Silver-seed gourdcarcmoB0733
CmoCh19G006300Carg22060Silver-seed gourdcarcmoB0293
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh19G006300CmoCh11G013540Cucurbita moschata (Rifu)cmocmoB110
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh19G006300Cucumber (Chinese Long) v3cmocucB0611
CmoCh19G006300Watermelon (97103) v2cmowmbB502
CmoCh19G006300Watermelon (97103) v2cmowmbB527
CmoCh19G006300Cucurbita moschata (Rifu)cmocmoB352
CmoCh19G006300Cucurbita moschata (Rifu)cmocmoB398
CmoCh19G006300Cucurbita maxima (Rimu)cmacmoB853
CmoCh19G006300Melon (DHL92) v3.5.1cmomeB477
CmoCh19G006300Cucurbita pepo (Zucchini)cmocpeB490
CmoCh19G006300Bottle gourd (USVL1VR-Ls)cmolsiB460
CmoCh19G006300Bottle gourd (USVL1VR-Ls)cmolsiB482
CmoCh19G006300Melon (DHL92) v3.6.1cmomedB526
CmoCh19G006300Melon (DHL92) v3.6.1cmomedB553
CmoCh19G006300Silver-seed gourdcarcmoB1089