Cp4.1LG04g07570 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g07570
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionATP-dependent Clp protease proteolytic subunit
LocationCp4.1LG04 : 3979125 .. 3983728 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAGTTAGGTAAGAGCCCAAAAGATAGCGAGACTATTGAGCCTCAAGCCTTTGGGCTTGGGCTGGGCTTGGGCTTGGGCTTGGGCTTAAAGCCCAATTGCAGTTCCGTCTAATTTTGGTTTTGTTTCCCTTTCTCGTTGTCTTGTTGTTAGCAGAACAGCGAGTGACCTCGATCAGAGAAGAACTCGAAGACCTCAAAAAATTTATCGGCAAAATCCGGCCAAGCTTCTCACCTGGCCTTCTCCATGGCGACATCTTCACCTCTTCATATCTCTGCTACGCCGTCGTTGGCCGTCGGCAGCTCAAAGTCATCGTTCCTTTTCGGTACCCATCTCCCTTTCCCCTCCTCTCGCCCAAGAACTTCATATCGCAGATACTTTCTTTCTCCCTCTGCCAAAAAATCGATGGACCACATTCCTAAGCAATTCAGAGAAGAGAATCTCAAAGATGGCTGTAAGTTTTCGATATTTAATTGTCTGGCCGGAATCATTCAATCATCTGAAGCTATTTATTTGTTTCCGTTCGTTTTCTGATGAAATTAGTTGATTGATTGGTAACTTGGAAAATATCTGTTCGTTTGGCGTTTTCTTTTCATGTGTTCTTGATGATTTGTGATGGTATTTCGATGGCCGGAGATTTTGGAGAGGGTAAATTTAATCTTTTATTAATAATATTTTAAGACTGAGCAACTGGTTGACAGTAAACAGAAATTGCCACCTCATTGGGGAGTTGTGTCTTTGAATCCACGTTCATTTTTCTTTTGTTAATTCTAGTTCCATCGTTATTTTCATGAGTTTGATCCTGACGAAAATAAACAATATCATTGCCTAAATCTCCATATCTCCTGTTCTTATAGTGATGGAGAACTACGAGAACGTTCCTCAATCACTTTATGGCCTTACACCTTCACAACTGGACATGTTCATGACAGAAGATAATCCTGTCAGGCGACAGTCAGAATTAGTTACTGAGGTTCTTTTCTCATTTGATCTTGAGGGTTCAGTAATTTCTATAAATTTGCGAATCCATACTCAGTTAAAAAGAAAGGAAAAAGAAACAGGCACATTTACTTTTTGCTGGAAGCTCAGTATTGTTCAAGCCAAGCATTATTATTGTGCTTTAGTAACCACAACGATTGCTTGTTACCTGGCAGGAAAGCATCTCATCCGCCCACAGCTATTTGAATAATGGTGGAATGTGGAGTCTATCAGGCATGGATGGAAAAAAGGGTCCATCAAAATATAGTATGAGCGCTAGTATGTATCGTGGGGGAGGAAGGGGATATGGGCGACGCCAATCAGCTCCTCCTGATTTGCCTTCTTTGCTCTTGGACGCTCGTATAGTCTATTTGGGCATGCCTGTGAGCCACTAAAATATTTATTCTTTACTCAATTCTGCTTTGCAAGATATTTTTTCTCAGGGGTACATCACTGTATTTTGTTGAAATAAATGCAGATCGTACCAGCAGTGACTGAGCTTCTTGTTGCTCAGTTTATGTGGCTAGACTATGATAACCCATCAAAGCCTATATATCTCTACATAAACTCTCCGGGGACGCAGGTTATTAATTGATATTTCCTTAATCCATGAAGTATTATATTTCCTGTTCTAACGAAGCTTGGAGTATCGTTGTAATTTTCATTGTTTTGACCATGTTGTTATTTTAATATTCAAGACCTAGTTTTTGTTGCTTTGGTGCTTGTTGATAACTTAGAATGAGAAGATGGAGAATGTTGGATTCGAAACTGAAGCATATGCTATAGCAGATATGATGGCTGTAAGTAGTCTCTTCCTTAACTGAACTTAATTCCTTTTGTCCAATATTTGTCATTGAGTAACTACGTATCTGGTCTTTGAATTTTTTGGTAAAATGCATTCCTTGAAAAGAAAAAATTGATCAGTAAGAAAAATGGAAGTTGTGGGGAGGTTATAAAAATAAAAAGAAGGCAACGACCATCATAGGAGCCGCCAAAAATGAACAAACAGGAATCGATATTACAAGAGAGCTCCGGTTGCTGGTACTAAAAGCGAAGGGAAATCTCTATAAGAATCGATGGTAGAAATCAAAAGGAAGTGTTGAAGTGAGCATATGCCATATCTTTCCCATAGAGAGCATTCCCCTCTTGAAAGATCTTGTGTTCCTTGCTGCTAAATATTCCTTAAGATAGCGAAAAAAAGAGCCTACTATGATGGCCCTCCTTCATCCTAAAACAGGAGTTATAGAAGGATTTCCATCCGATATTGACCGATAGTATCAACTTTAGGCTGGTCTTCAAAAACCTCCCTAAACATAAGCAGAAAAAGAGTAATGTCAAAGCATGTGATTCTTTTGCCCCGACATTACCCTGCCCCGCCCCTAGAGTTAGTATACCAATGTGGACCTAAGCTCGAAGTAGTTAATATTGGGTTAAAGAGTACGGTGTTAATTTTCCCATGTATGACGAGCCAGGCACAGAGTTTATGAAACACACCTATTGGAAGAAGTTTTCTTTCTTCTTCTTTTTGTTTTATTTATATTTATTTATTTATTCTTTTTTTTTTTTTTTGCAAGCTAAAGCCCAAGTAAGGGAGATGTTCCTTTGCCTACAAGGTATCAAATAAAACAAACTGTAACAGCCCAAACCCACTGCTAGCAAATATTGTCCTCTTTGGGCTTTCCCTTTTGGCTTCTCCTCAAGATTTTAAAATGCGTTTGCTAGGGGAGATGTTTCCACGCCCTTTATAAGGAATGCTTTGTTCCCCTCTCCAACCAATGTGAGATNTTGGCTTCTCCTCAAGATTTTAAAATGCGTTTGCTAGGGGAGATGTTTCCACGCCCTTTATAAGGAATGCTTTGTTCCCCTCTCCAACCAATGTGAGATCTCACAATCCACCCCTTTGGGGCCCAACGTCCTCGCTGGCACACCGCCCGGTGTCTGACTCTGATACCATTTGTACCAGCCCAAATACCGCTAGCAAATATTGTCCTCTTTGGGCTTTCCCTTTTGGGCTTTTCCTCAAGGTTTTAAAACGCGTCTGGTAGGGAGAGGTTTCATACCCTTACAAGGAATGTTTCATTTCCCTCTTCAACTAAGGTGAGATTTCGTACTAGGACACAAAGGGATGATTGGAAAAAGATTTATAATTTAAGAAATTCCAAATGACTTGGGAGATCAAACTTGATATTTGTGGAATCCAAAATGGTGGAAGATAGCCCCCTTGAATGAAGGATTAAAAGGGAAATATACCAGCTTCATCCCCTCTATCACGTAAAGCTTTCTTACATTGGAAGTAAACCGAGGACCCAGAGACATTTTCTCCTACCTGATGATAGCTTATTAATCCATCAACGTCGGCTGCTAAATTATTTTATGAAAGTAAAAATGTGCCAAAATAAAACCGTATCAATAGTTTATGATTTAGTTACTTCGTTGTTTTTATTATGCCATCAACAAGGTCTCAGCTTAATTCTTTTTACATCTGTGTAGTATTGCAAACCTGATGTCTATACTATAAACTGCGGAATGGCATTCGGTCAAGCAGCAATGCTTTTGTCACTTGGAACCAAGGGTTACCGTGCTGTCCAGCCTAACTCCTCCGGTACGTTCCTCGCCTCTTAAAACTGATATATAATTCTTTCATTTTGCATAATTCTGCATGCTCATCAACCATCCAGGATTATGGTAACTTGTTTTTCCTGGCTCGCGAGGATCATTCCCTTCCTTTTTGACCATTGTCTTTCATAATTGCAGCTAAACTGTATCTGCCTAAAGTTAGTAGATCAAGTGGTGCGGTCATAGATATGTGGATTAAGGTACGCATACTTCCCTCTCTCTGTTGAGCTTTAGCCAGTGTCTCCCTCTCATTTTCCTGGAACTCGTGTCTTAGGCCAGAGAACTCGATGCCAACACCGATTACTATATCGAGCTATTAGCTAAAGGAACTGGTAAACCCGCGGAAGAGATTGCTAAAGATGTTCAACGACCCAAGTACTTCAGTCCCCAAGAAGCCATTGACTATGGCCTTGTAGACAAGATAATCAGCTCGCGGGATTCTGCGTTCGAAAAGAGGGTCATTATCACATACATTTCTATCTCTCTCTCTCGTTTTCTTTTAAGATGCTTTGAATTTCGTCACGCAAGTCTAACATTTTGCTTCTACAATCAGAACTACGACGATATGCTTGCGCAGTCGAGAGCCATGAGGAAAGGAGCCGGAGGCAATCCACAAGCCGCGCCATCCGGGTTGAGGTAATTCAAGTGTAGAAATAGAAGGATACACAACCCCACTCTTTCATAGCTAGCTGCTACCCCCTGGATGGGCTTTATAATTCTTTCTTTCTTGGGGTGGGGTGTTTTGGTTTACTTCTGAAGGACTTGACTAATGAATGAACATCAGCAATGTGATCTTTATAGCCGGTTTGTATATTGAAAAACTCTCTCATTTAGGTTTAGTTCTGTGTTTTTAAGGTTATTATGATTTTGTGATGTTTACTCACACTTGCTCTTGCTCTTGCAATCGTATGCGATGTGAGCCAGTCCTAGAGAACGTTCATTCATTTCAAGCTGTCTGTCTGCTCATTCGTTTTAGTCCGCTATAAGATCTTTCTTATTATGATTCGAACAG

mRNA sequence

TGAGTTAGGTAAGAGCCCAAAAGATAGCGAGACTATTGAGCCTCAAGCCTTTGGGCTTGGGCTGGGCTTGGGCTTGGGCTTGGGCTTAAAGCCCAATTGCAGTTCCGTCTAATTTTGGTTTTGTTTCCCTTTCTCGTTGTCTTGTTGTTAGCAGAACAGCGAGTGACCTCGATCAGAGAAGAACTCGAAGACCTCAAAAAATTTATCGGCAAAATCCGGCCAAGCTTCTCACCTGGCCTTCTCCATGGCGACATCTTCACCTCTTCATATCTCTGCTACGCCGTCGTTGGCCGTCGGCAGCTCAAAGTCATCGTTCCTTTTCGGTACCCATCTCCCTTTCCCCTCCTCTCGCCCAAGAACTTCATATCGCAGATACTTTCTTTCTCCCTCTGCCAAAAAATCGATGGACCACATTCCTAAGCAATTCAGAGAAGAGAATCTCAAAGATGGCTTGATGGAGAACTACGAGAACGTTCCTCAATCACTTTATGGCCTTACACCTTCACAACTGGACATGTTCATGACAGAAGATAATCCTGTCAGGCGACAGTCAGAATTAGTTACTGAGGAAAGCATCTCATCCGCCCACAGCTATTTGAATAATGGTGGAATGTGGAGTCTATCAGGCATGGATGGAAAAAAGGGTCCATCAAAATATAGTATGAGCGCTAGTATGTATCGTGGGGGAGGAAGGGGATATGGGCGACGCCAATCAGCTCCTCCTGATTTGCCTTCTTTGCTCTTGGACGCTCGTATAGTCTATTTGGGCATGCCTATCGTACCAGCAGTGACTGAGCTTCTTGTTGCTCAGTTTATGTGGCTAGACTATGATAACCCATCAAAGCCTATATATCTCTACATAAACTCTCCGGGGACGCAGAATGAGAAGATGGAGAATGTTGGATTCGAAACTGAAGCATATGCTATAGCAGATATGATGGCTTATTGCAAACCTGATGTCTATACTATAAACTGCGGAATGGCATTCGGTCAAGCAGCAATGCTTTTGTCACTTGGAACCAAGGGTTACCGTGCTGTCCAGCCTAACTCCTCCGCTAAACTGTATCTGCCTAAAGTTAGTAGATCAAGTGGTGCGGTCATAGATATGTGGATTAAGGCCAGAGAACTCGATGCCAACACCGATTACTATATCGAGCTATTAGCTAAAGGAACTGGTAAACCCGCGGAAGAGATTGCTAAAGATGTTCAACGACCCAAGTACTTCAGTCCCCAAGAAGCCATTGACTATGGCCTTGTAGACAAGATAATCAGCTCGCGGGATTCTGCGTTCGAAAAGAGGAACTACGACGATATGCTTGCGCAGTCGAGAGCCATGAGGAAAGGAGCCGGAGGCAATCCACAAGCCGCGCCATCCGGGTTGAGGTAATTCAAGTGTAGAAATAGAAGGATACACAACCCCACTCTTTCATAGCTAGCTGCTACCCCCTGGATGGGCTTTATAATTCTTTCTTTCTTGGGGTGGGGTGTTTTGGTTTACTTCTGAAGGACTTGACTAATGAATGAACATCAGCAATGTGATCTTTATAGCCGGTTTGTATATTGAAAAACTCTCTCATTTAGGTTTAGTTCTGTGTTTTTAAGGTTATTATGATTTTGTGATGTTTACTCACACTTGCTCTTGCTCTTGCAATCGTATGCGATGTGAGCCAGTCCTAGAGAACGTTCATTCATTTCAAGCTGTCTGTCTGCTCATTCGTTTTAGTCCGCTATAAGATCTTTCTTATTATGATTCGAACAG

Coding sequence (CDS)

ATGGCGACATCTTCACCTCTTCATATCTCTGCTACGCCGTCGTTGGCCGTCGGCAGCTCAAAGTCATCGTTCCTTTTCGGTACCCATCTCCCTTTCCCCTCCTCTCGCCCAAGAACTTCATATCGCAGATACTTTCTTTCTCCCTCTGCCAAAAAATCGATGGACCACATTCCTAAGCAATTCAGAGAAGAGAATCTCAAAGATGGCTTGATGGAGAACTACGAGAACGTTCCTCAATCACTTTATGGCCTTACACCTTCACAACTGGACATGTTCATGACAGAAGATAATCCTGTCAGGCGACAGTCAGAATTAGTTACTGAGGAAAGCATCTCATCCGCCCACAGCTATTTGAATAATGGTGGAATGTGGAGTCTATCAGGCATGGATGGAAAAAAGGGTCCATCAAAATATAGTATGAGCGCTAGTATGTATCGTGGGGGAGGAAGGGGATATGGGCGACGCCAATCAGCTCCTCCTGATTTGCCTTCTTTGCTCTTGGACGCTCGTATAGTCTATTTGGGCATGCCTATCGTACCAGCAGTGACTGAGCTTCTTGTTGCTCAGTTTATGTGGCTAGACTATGATAACCCATCAAAGCCTATATATCTCTACATAAACTCTCCGGGGACGCAGAATGAGAAGATGGAGAATGTTGGATTCGAAACTGAAGCATATGCTATAGCAGATATGATGGCTTATTGCAAACCTGATGTCTATACTATAAACTGCGGAATGGCATTCGGTCAAGCAGCAATGCTTTTGTCACTTGGAACCAAGGGTTACCGTGCTGTCCAGCCTAACTCCTCCGCTAAACTGTATCTGCCTAAAGTTAGTAGATCAAGTGGTGCGGTCATAGATATGTGGATTAAGGCCAGAGAACTCGATGCCAACACCGATTACTATATCGAGCTATTAGCTAAAGGAACTGGTAAACCCGCGGAAGAGATTGCTAAAGATGTTCAACGACCCAAGTACTTCAGTCCCCAAGAAGCCATTGACTATGGCCTTGTAGACAAGATAATCAGCTCGCGGGATTCTGCGTTCGAAAAGAGGAACTACGACGATATGCTTGCGCAGTCGAGAGCCATGAGGAAAGGAGCCGGAGGCAATCCACAAGCCGCGCCATCCGGGTTGAGGTAA

Protein sequence

MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFLSPSAKKSMDHIPKQFREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLNNGGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKDVQRPKYFSPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQSRAMRKGAGGNPQAAPSGLR
Homology
[Close]
BLAST of Cp4.1LG04g07570 vs. Swiss-Prot
Match: CLPR1_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic OS=Arabidopsis thaliana GN=CLPR1 PE=1 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 8.8e-140
Identity = 259/360 (71.94%), Postives = 301/360 (83.61%), Query Frame = 1 

Query: 23  SFLFGTHLPFPSSRPRTSYRRYFLSPSAKKSMDHIPKQFREENLKDGLMENYENVPQSLY 82
           S LF +++P  S+ PR + R +  + +   S DHIPKQFR +NLKDG+M+N++NVPQ  Y
Sbjct: 33  SKLFSSNMPC-STVPRRTRRSHCFASAKDMSFDHIPKQFRGDNLKDGVMQNFKNVPQYFY 92

Query: 83  GLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLNNGGMWSLSGMDGKKGPSKYSMSA 142
           GL  +Q+DMFMTED+PVRRQ+E VTEESISS ++YLNNGG+WS+SGM+      +YSMS 
Sbjct: 93  GLNSAQMDMFMTEDSPVRRQAEKVTEESISSRNNYLNNGGIWSMSGMNAADA-RRYSMSV 152

Query: 143 SMYRGGGRGYG--RRQSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLDYDNPSK 202
            MYRGGG G G  R ++APPDLPSLLLDARI YLGMPIVPAVTELLVAQFMWLDYDNP+K
Sbjct: 153 QMYRGGGGGGGSERPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTK 212

Query: 203 PIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTK 262
           PIYLYINSPGTQNEKME VG ETEAYAIAD ++YCK DVYTINCGMAFGQAAMLLSLG K
Sbjct: 213 PIYLYINSPGTQNEKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKK 272

Query: 263 GYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKD 322
           GYRAVQP+SS KLYLPKV+RSSGA IDMWIKA+ELDANT+YYIELLAKGTGK  E+I +D
Sbjct: 273 GYRAVQPHSSTKLYLPKVNRSSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINED 332

Query: 323 VQRPKYFSPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQSRAMRKGAGGNPQAAPSGLR 381
           ++RPKY   Q AIDYG+ DKI  S+DS+FEKR+YD  LAQ RAMR G GG+P AAP+GLR
Sbjct: 333 IKRPKYLQAQAAIDYGIADKIADSQDSSFEKRDYDGTLAQ-RAMRPG-GGSP-AAPAGLR 387

[Close]
BLAST of Cp4.1LG04g07570 vs. Swiss-Prot
Match: CLPR3_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana GN=CLPR3 PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 9.1e-44
Identity = 94/210 (44.76%), Postives = 137/210 (65.24%), Query Frame = 1 

Query: 135 PSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLD 194
           P   S  A + R       R ++ PPDLPS+LLD RIVY+GMP+VPAVTEL+VA+ M+L 
Sbjct: 95  PQLMSSPAQVERSVAYNEHRPRTPPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQ 154

Query: 195 YDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAML 254
           + +P +PIY+YINS GT  +  E VG E+E +AI D +   K +V+T+  G A GQA +L
Sbjct: 155 WLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLL 214

Query: 255 LSLGTKGYRAVQPNSSAKLYLPKVSRSSGAV--IDMWIKARELDANTDYYIELLAKGTGK 314
           LS GTKG R + P++ A +  P+V  SSG +   D+ I+A+E+  N D  +ELL+K TG 
Sbjct: 215 LSAGTKGKRFMMPHAKAMIQQPRVP-SSGLMPASDVLIRAKEVITNRDILVELLSKHTGN 274

Query: 315 PAEEIAKDVQRPKYFSPQEAIDYGLVDKII 343
             E +A  ++RP Y    +A ++G++D+I+
Sbjct: 275 SVETVANVMRRPYYMDAPKAKEFGVIDRIL 303

[Close]
BLAST of Cp4.1LG04g07570 vs. Swiss-Prot
Match: CLPR_SYNE7 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus elongatus (strain PCC 7942) GN=clpR PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.6e-43
Identity = 90/200 (45.00%), Postives = 131/200 (65.50%), Query Frame = 1 

Query: 156 QSAPPDLPSLLLDARIVYLGMPIVPA----------VTELLVAQFMWLDYDNPSKPIYLY 215
           ++ PPDLPSLLL  RI+YLGMP+  +          VTEL++AQ ++L++DNP KPIY Y
Sbjct: 19  RTPPPDLPSLLLKERIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDNPEKPIYFY 78

Query: 216 INSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTKGYRAV 275
           INS GT     + +G+ETEA+AI D M Y KP V+TI  G A G AAM+LS GT G RA 
Sbjct: 79  INSTGTSWYTGDAIGYETEAFAICDTMRYIKPPVHTICIGQAMGTAAMILSGGTPGNRAS 138

Query: 276 QPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKDVQRPK 335
            P+++  L  P+   + G   D+ I+A+E+ AN    +E+ A+ TG+  + +A+D  R  
Sbjct: 139 LPHATIVLNQPRTG-AQGQASDIQIRAKEVLANKRTMLEIFARNTGQDPDRLARDTDRML 198

Query: 336 YFSPQEAIDYGLVDKIISSR 346
           Y +P +A++YGL+D+++ SR
Sbjct: 199 YMTPAQAVEYGLIDRVLDSR 217

[Close]
BLAST of Cp4.1LG04g07570 vs. Swiss-Prot
Match: CLPR4_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana GN=CLPR4 PE=1 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.0e-43
Identity = 87/202 (43.07%), Postives = 136/202 (67.33%), Query Frame = 1 

Query: 156 QSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEK 215
           +  PPDL S L   RIVYLGM +VP+VTEL++A+F++L Y++  KPIYLYINS GT  + 
Sbjct: 100 EQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGT-TKN 159

Query: 216 MENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYL 275
            E +G++TEA+AI D+M Y KP ++T+  G A+G+AA+LL+ G KG R+  P+S+  +  
Sbjct: 160 GEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQ 219

Query: 276 PKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKDVQRPKYFSPQEAIDY 335
           P ++R  G   D+ I  +E+       ++L +K  GK  E+I  D++RPKYFSP EA++Y
Sbjct: 220 P-IARFQGQATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEY 279

Query: 336 GLVDKIISSRDSAFEKRNYDDM 358
           G++DK++ +   + ++    D+
Sbjct: 280 GIIDKVVYNERGSQDRGVVSDL 299

[Close]
BLAST of Cp4.1LG04g07570 vs. Swiss-Prot
Match: CLPR_SYNY3 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=clpR PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 6.5e-42
Identity = 90/199 (45.23%), Postives = 130/199 (65.33%), Query Frame = 1 

Query: 156 QSAPPDLPSLLLDARIVYLGMPIVPA----------VTELLVAQFMWLDYDNPSKPIYLY 215
           ++ PPDL SLLL  RIVYLGMP+  +          VT+L++AQ ++L +D+P KPIY Y
Sbjct: 17  KTPPPDLESLLLKERIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDDPDKPIYFY 76

Query: 216 INSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTKGYRAV 275
           INS GT     + VGFETEA+AI D + Y KP V+TI  G A G AAM+LS GTKGYRA 
Sbjct: 77  INSTGTSWYTGDAVGFETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSSGTKGYRAS 136

Query: 276 QPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKDVQRPK 335
            P+++  L   +   + G   D+ I+A+E+ +N    +E+L+  TG+  E++AKD+ R  
Sbjct: 137 LPHATIVLNQNRTG-AQGQATDIQIRAKEVISNKQTMLEILSLNTGQTQEKLAKDMDRTF 196

Query: 336 YFSPQEAIDYGLVDKIISS 345
           Y +P +A +YGL+D+++ S
Sbjct: 197 YLTPAQAKEYGLIDRVLES 214

[Close]
BLAST of Cp4.1LG04g07570 vs. TrEMBL
Match: A0A0A0K4G3_CUCSA (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=Csa_7G071430 PE=3 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 9.8e-162
Identity = 292/380 (76.84%), Postives = 331/380 (87.11%), Query Frame = 1 

Query: 1   MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFLSPSAKKSMDHIPKQ 60
           MATSS  H+SA PSL++GSSKSSFLFGT LP P S  R S RRY LSP A++SMDHIPKQ
Sbjct: 1   MATSSLFHLSAPPSLSIGSSKSSFLFGTQLPLPPSCSRISRRRYVLSPHAQQSMDHIPKQ 60

Query: 61  FREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLNN 120
           FREENLKDGL+ENY+NVPQ LYGLTPSQ+DMFMTEDNPV+RQSELV EE ISSA++YLN+
Sbjct: 61  FREENLKDGLIENYKNVPQYLYGLTPSQMDMFMTEDNPVQRQSELVNEEKISSAYNYLNH 120

Query: 121 GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP 180
           GGMWSL+GMDGK GP KYSMS +MYRGGG G  R +S+PPDLP+LLLDARI+YLGMPIVP
Sbjct: 121 GGMWSLTGMDGK-GPDKYSMSVNMYRGGGGG--RPRSSPPDLPTLLLDARIIYLGMPIVP 180

Query: 181 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY 240
           AVTEL+VAQFMWLDYDNP+KPIYLYINS GTQ+E  E VG ETEAYAIADMM+YCK DVY
Sbjct: 181 AVTELIVAQFMWLDYDNPTKPIYLYINSSGTQDENRELVGSETEAYAIADMMSYCKSDVY 240

Query: 241 TINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTD 300
           TIN  MA+GQAAMLLSLGTKGYRA+QPN+S KLYLPKV+ SSG+ IDMWIKA+ELDANT+
Sbjct: 241 TINLAMAYGQAAMLLSLGTKGYRALQPNASTKLYLPKVNNSSGSAIDMWIKAKELDANTE 300

Query: 301 YYIELLAKGTGKPAEEIAKDVQRPKYFSPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ 360
           YY+ELLAKG GKP EEI KD+Q  KYF PQEAIDYG+ DKII   D A+EK+NYD+ML+Q
Sbjct: 301 YYLELLAKGIGKPKEEINKDIQLSKYFKPQEAIDYGIADKIIKPEDPAYEKKNYDEMLSQ 360

Query: 361 SRA--MRKGAGGNPQAAPSG 379
           S+A   R+G G NPQAAP+G
Sbjct: 361 SKAANARRGRGVNPQAAPTG 377

[Close]
BLAST of Cp4.1LG04g07570 vs. TrEMBL
Match: A0A061E852_THECC (ATP-dependent Clp protease proteolytic subunit OS=Theobroma cacao GN=TCM_007216 PE=3 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 3.7e-161
Identity = 302/385 (78.44%), Postives = 331/385 (85.97%), Query Frame = 1 

Query: 1   MATSSPLHISATPSLAVGS----SKSSFLFGTHLPFPSSRPRT-SYRRYFLSPSAKKSMD 60
           MATS    ++A    AVG     SKS FL GT L F    PR  +  R + +P AK S+D
Sbjct: 1   MATSLLSPLTAPNPEAVGPNIRLSKSCFLSGTKLFFLKPHPRKPTAHRCYTTPFAK-SLD 60

Query: 61  HIPKQFREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAH 120
           HIPKQFR+ENLKDGLM+N++NVPQ LYGL+PSQ+DMFMTEDNPVRRQSE VTEESISSA 
Sbjct: 61  HIPKQFRQENLKDGLMDNFKNVPQYLYGLSPSQMDMFMTEDNPVRRQSERVTEESISSAR 120

Query: 121 SYLNNGGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLG 180
           +YL+NGGMWS+SG + + GPSKYSMS SMYRGG RGYGR ++APPDLPSLLLDARI YLG
Sbjct: 121 NYLDNGGMWSMSGSNDR-GPSKYSMSVSMYRGGARGYGRPRTAPPDLPSLLLDARICYLG 180

Query: 181 MPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYC 240
           MPIVPAVTELLVAQFMWLDYDNPSKPIYLYINS GTQNEKME VG ETEAYAIAD MAYC
Sbjct: 181 MPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSSGTQNEKMETVGSETEAYAIADTMAYC 240

Query: 241 KPDVYTINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKAREL 300
           K DVYT+NCGMA+GQAAMLLSLG KG+RAVQPNSS KLYLPKV+RSSGAVIDMWIKA+EL
Sbjct: 241 KADVYTVNCGMAYGQAAMLLSLGAKGFRAVQPNSSTKLYLPKVNRSSGAVIDMWIKAKEL 300

Query: 301 DANTDYYIELLAKGTGKPAEEIAKDVQRPKYFSPQEAIDYGLVDKIISSRDSAFEKRNYD 360
           DANT+YYIELLAKGTGK  EEIAKDVQRPKYF  QEAIDYGLVDKII SRD+AFEKRNYD
Sbjct: 301 DANTEYYIELLAKGTGKTEEEIAKDVQRPKYFQAQEAIDYGLVDKIIDSRDAAFEKRNYD 360

Query: 361 DMLAQSRAMRKGAGGNPQAAPSGLR 381
           +MLAQS+AMR+GAG  PQAAPSG R
Sbjct: 361 EMLAQSKAMRRGAGFGPQAAPSGFR 383

[Close]
BLAST of Cp4.1LG04g07570 vs. TrEMBL
Match: A0A068TM43_COFCA (ATP-dependent Clp protease proteolytic subunit OS=Coffea canephora GN=GSCOC_T00014550001 PE=3 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 6.3e-161
Identity = 294/367 (80.11%), Postives = 320/367 (87.19%), Query Frame = 1 

Query: 16  AVGSSKSSFLFGTHLPFPSSR-PRT-SYRRYFLSPSAKKSMDHIPKQFREENLKDGLMEN 75
           ++G  KSSF     L F S R P+T S RR        KS+DHIPK+FREENLKDGLM+N
Sbjct: 29  SIGLRKSSFFPDPKLVFASPRKPKTNSVRRCCYRAPVAKSLDHIPKRFREENLKDGLMDN 88

Query: 76  YENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLNNGGMWSLSGMDGKK 135
           Y+N PQ LYGLTPSQ+DMFMTEDNPVRRQ+E VTEESISSA +YLNNGGMWS+SGMD ++
Sbjct: 89  YKNTPQYLYGLTPSQMDMFMTEDNPVRRQAERVTEESISSACNYLNNGGMWSMSGMD-ER 148

Query: 136 GPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWL 195
           GPSKYSMS SMYRGG RGYGR ++APPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWL
Sbjct: 149 GPSKYSMSVSMYRGGARGYGRPRTAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWL 208

Query: 196 DYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAM 255
           DYDNPSKPIYLYINS GTQNEKME VG ETEAYAIAD MAYCK DVYT+NCGMA+GQAAM
Sbjct: 209 DYDNPSKPIYLYINSSGTQNEKMETVGSETEAYAIADTMAYCKSDVYTVNCGMAYGQAAM 268

Query: 256 LLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKP 315
           LL+LGTKGYRAVQPN S KLYLPKVSRSSGAVIDMWIKA+ELDANT+YYIELLAKG GKP
Sbjct: 269 LLALGTKGYRAVQPNCSTKLYLPKVSRSSGAVIDMWIKAKELDANTEYYIELLAKGIGKP 328

Query: 316 AEEIAKDVQRPKYFSPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQSRAMRKGAGGNPQ 375
            EEI KDVQRPKYF  QEAIDYG+ DKII SRD AF+KRNY++MLAQS+AMR+ AG  PQ
Sbjct: 329 KEEIEKDVQRPKYFQAQEAIDYGIADKIIDSRDVAFDKRNYEEMLAQSKAMRRTAGAGPQ 388

Query: 376 AAPSGLR 381
           AAPSGLR
Sbjct: 389 AAPSGLR 394

[Close]
BLAST of Cp4.1LG04g07570 vs. TrEMBL
Match: W9RKX6_9ROSA (ATP-dependent Clp protease proteolytic subunit OS=Morus notabilis GN=L484_003683 PE=3 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 2.0e-159
Identity = 308/412 (74.76%), Postives = 338/412 (82.04%), Query Frame = 1 

Query: 1   MATSSPLHISATPSLA------VGSSKSSFLFGTHLPF-PSS------RPRTSYRRYFLS 60
           MATS    +SA  SLA      +G   SSFL GT L   PSS      R R + RR+F+S
Sbjct: 1   MATSLISSLSAPSSLARQLGPSIGFPNSSFLHGTKLFCEPSSFLALSGRERPTSRRFFVS 60

Query: 61  PSAKKSMDHIPKQFREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVT 120
           PSAK S+DHIPKQFRE+NLKDGLM+NY+N PQ LYGL+PSQ+DMFMTEDNPVRRQSE VT
Sbjct: 61  PSAK-SLDHIPKQFREQNLKDGLMDNYKNAPQYLYGLSPSQMDMFMTEDNPVRRQSEAVT 120

Query: 121 EESISSAHSYLNNGGMWSLSGMDGKKGPSKYSMSASMYRGGG-RGYGRRQSAPPDLPSLL 180
           EESISS+H+YLN+GGMWSLSGM   KGPSKYSMS SMYRGGG RGYGR ++APPDLPSLL
Sbjct: 121 EESISSSHNYLNHGGMWSLSGMK-DKGPSKYSMSVSMYRGGGARGYGRPRTAPPDLPSLL 180

Query: 181 LDARIVYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAY 240
           LDARI YLGMPIVPAVTELLVAQF+WLDYDNPSKPIYLYINS GTQNEKME VG ETEAY
Sbjct: 181 LDARICYLGMPIVPAVTELLVAQFLWLDYDNPSKPIYLYINSSGTQNEKMETVGSETEAY 240

Query: 241 AIADMMA------------------YCKPDVYTINCGMAFGQAAMLLSLGTKGYRAVQPN 300
           AIADMM+                  Y K DVYT+NCGMA+GQAAMLL+LG KGYRAVQPN
Sbjct: 241 AIADMMSYSSLLNYCVFNLCMSTMKYVKSDVYTVNCGMAYGQAAMLLALGAKGYRAVQPN 300

Query: 301 SSAKLYLPKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKDVQRPKYFS 360
           SS KLYLPKV+RSSGAVIDMWIKA+ELDANT+YYIELLAKG GK  EEIAKDVQRPKY  
Sbjct: 301 SSTKLYLPKVNRSSGAVIDMWIKAKELDANTEYYIELLAKGIGKSKEEIAKDVQRPKYLQ 360

Query: 361 PQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQSRAMRKGAGGNPQAAPSGLR 381
            Q+AIDYG+ DKIISSRD AFEKR+YD+MLAQSRAM++GAGGNPQAAPSG R
Sbjct: 361 AQDAIDYGVADKIISSRDIAFEKRDYDEMLAQSRAMKRGAGGNPQAAPSGFR 410

[Close]
BLAST of Cp4.1LG04g07570 vs. TrEMBL
Match: M5VJ49_PRUPE (ATP-dependent Clp protease proteolytic subunit OS=Prunus persica GN=PRUPE_ppa006873mg PE=3 SV=1)

HSP 1 Score: 567.4 bits (1461), Expect = 1.3e-158
Identity = 296/394 (75.13%), Postives = 331/394 (84.01%), Query Frame = 1 

Query: 1   MATSSPLHISATPSLAVGSSK------------SSFLFGTHL--PFPSSRPRTSYRRYFL 60
           MATS   H+SA PS  + + +            ++FL GT +    PSS  R + +R F 
Sbjct: 1   MATSLLSHLSAPPSPTIDNYQGRQAGAFNSGIPNTFLHGTKVFSATPSSSRRLAAQRRFK 60

Query: 61  SPSAKKSMDHIPKQFREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELV 120
           S  AK S +HIPKQFR+ENLKDGLM+NY+NVP  LYGL+PSQ+DMFMTEDNP RRQSE V
Sbjct: 61  SAYAKAS-EHIPKQFRQENLKDGLMDNYKNVPHYLYGLSPSQMDMFMTEDNPARRQSEKV 120

Query: 121 TEESISSAHSYLNNGGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLL 180
           TE+SISSA++YLN+GGMWS+SGMD  KGPSKYSMS SMYRGG RGYGR ++APPDLPSLL
Sbjct: 121 TEQSISSANNYLNHGGMWSMSGMD-DKGPSKYSMSVSMYRGGARGYGRPRTAPPDLPSLL 180

Query: 181 LDARIVYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAY 240
           LDARI YLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINS GTQNEKME+VG ETEAY
Sbjct: 181 LDARICYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSSGTQNEKMESVGSETEAY 240

Query: 241 AIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVI 300
           AIADMM Y K DVYT+NCGMA+GQAA+LLSLGT+GYRAVQPNSS KLYLPKVSRSSG+VI
Sbjct: 241 AIADMMNYVKSDVYTVNCGMAYGQAALLLSLGTRGYRAVQPNSSTKLYLPKVSRSSGSVI 300

Query: 301 DMWIKARELDANTDYYIELLAKGTGKPAEEIAKDVQRPKYFSPQEAIDYGLVDKIISSRD 360
           DMWIKA+ELDANT+YYIELLAKGTGK  EEIAKD+QRPKYF  QEAI+YGLVDKII SRD
Sbjct: 301 DMWIKAKELDANTEYYIELLAKGTGKTKEEIAKDIQRPKYFQGQEAIEYGLVDKIIDSRD 360

Query: 361 SAFEKRNYDDMLAQSRAMRKGAGGNPQAAPSGLR 381
           +AFEKRNYD+ML QSRAMR+   G PQAAPSG R
Sbjct: 361 AAFEKRNYDEMLTQSRAMRRAGAGGPQAAPSGFR 392

[Close]
BLAST of Cp4.1LG04g07570 vs. TAIR10
Match: AT1G49970.1 (AT1G49970.1 CLP protease proteolytic subunit 1)

HSP 1 Score: 498.0 bits (1281), Expect = 5.0e-141
Identity = 259/360 (71.94%), Postives = 301/360 (83.61%), Query Frame = 1 

Query: 23  SFLFGTHLPFPSSRPRTSYRRYFLSPSAKKSMDHIPKQFREENLKDGLMENYENVPQSLY 82
           S LF +++P  S+ PR + R +  + +   S DHIPKQFR +NLKDG+M+N++NVPQ  Y
Sbjct: 33  SKLFSSNMPC-STVPRRTRRSHCFASAKDMSFDHIPKQFRGDNLKDGVMQNFKNVPQYFY 92

Query: 83  GLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLNNGGMWSLSGMDGKKGPSKYSMSA 142
           GL  +Q+DMFMTED+PVRRQ+E VTEESISS ++YLNNGG+WS+SGM+      +YSMS 
Sbjct: 93  GLNSAQMDMFMTEDSPVRRQAEKVTEESISSRNNYLNNGGIWSMSGMNAADA-RRYSMSV 152

Query: 143 SMYRGGGRGYG--RRQSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLDYDNPSK 202
            MYRGGG G G  R ++APPDLPSLLLDARI YLGMPIVPAVTELLVAQFMWLDYDNP+K
Sbjct: 153 QMYRGGGGGGGSERPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTK 212

Query: 203 PIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTK 262
           PIYLYINSPGTQNEKME VG ETEAYAIAD ++YCK DVYTINCGMAFGQAAMLLSLG K
Sbjct: 213 PIYLYINSPGTQNEKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKK 272

Query: 263 GYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKD 322
           GYRAVQP+SS KLYLPKV+RSSGA IDMWIKA+ELDANT+YYIELLAKGTGK  E+I +D
Sbjct: 273 GYRAVQPHSSTKLYLPKVNRSSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINED 332

Query: 323 VQRPKYFSPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQSRAMRKGAGGNPQAAPSGLR 381
           ++RPKY   Q AIDYG+ DKI  S+DS+FEKR+YD  LAQ RAMR G GG+P AAP+GLR
Sbjct: 333 IKRPKYLQAQAAIDYGIADKIADSQDSSFEKRDYDGTLAQ-RAMRPG-GGSP-AAPAGLR 387

[Close]
BLAST of Cp4.1LG04g07570 vs. TAIR10
Match: AT1G09130.3 (AT1G09130.3 ATP-dependent caseinolytic (Clp) protease/crotonase family protein)

HSP 1 Score: 179.1 bits (453), Expect = 5.1e-45
Identity = 94/210 (44.76%), Postives = 137/210 (65.24%), Query Frame = 1 

Query: 135 PSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLD 194
           P   S  A + R       R ++ PPDLPS+LLD RIVY+GMP+VPAVTEL+VA+ M+L 
Sbjct: 95  PQLMSSPAQVERSVAYNEHRPRTPPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQ 154

Query: 195 YDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAML 254
           + +P +PIY+YINS GT  +  E VG E+E +AI D +   K +V+T+  G A GQA +L
Sbjct: 155 WLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLL 214

Query: 255 LSLGTKGYRAVQPNSSAKLYLPKVSRSSGAV--IDMWIKARELDANTDYYIELLAKGTGK 314
           LS GTKG R + P++ A +  P+V  SSG +   D+ I+A+E+  N D  +ELL+K TG 
Sbjct: 215 LSAGTKGKRFMMPHAKAMIQQPRVP-SSGLMPASDVLIRAKEVITNRDILVELLSKHTGN 274

Query: 315 PAEEIAKDVQRPKYFSPQEAIDYGLVDKII 343
             E +A  ++RP Y    +A ++G++D+I+
Sbjct: 275 SVETVANVMRRPYYMDAPKAKEFGVIDRIL 303

[Close]
BLAST of Cp4.1LG04g07570 vs. TAIR10
Match: AT4G17040.1 (AT4G17040.1 CLP protease R subunit 4)

HSP 1 Score: 177.9 bits (450), Expect = 1.1e-44
Identity = 87/202 (43.07%), Postives = 136/202 (67.33%), Query Frame = 1 

Query: 156 QSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEK 215
           +  PPDL S L   RIVYLGM +VP+VTEL++A+F++L Y++  KPIYLYINS GT  + 
Sbjct: 100 EQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGT-TKN 159

Query: 216 MENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYL 275
            E +G++TEA+AI D+M Y KP ++T+  G A+G+AA+LL+ G KG R+  P+S+  +  
Sbjct: 160 GEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQ 219

Query: 276 PKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKDVQRPKYFSPQEAIDY 335
           P ++R  G   D+ I  +E+       ++L +K  GK  E+I  D++RPKYFSP EA++Y
Sbjct: 220 P-IARFQGQATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEY 279

Query: 336 GLVDKIISSRDSAFEKRNYDDM 358
           G++DK++ +   + ++    D+
Sbjct: 280 GIIDKVVYNERGSQDRGVVSDL 299

[Close]
BLAST of Cp4.1LG04g07570 vs. TAIR10
Match: AT5G45390.1 (AT5G45390.1 CLP protease P4)

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-26
Identity = 68/187 (36.36%), Postives = 107/187 (57.22%), Query Frame = 1 

Query: 156 QSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEK 215
           + A  D+  LLL  RIV+LG  I   V + +++Q + LD  +P K I L+INSPG     
Sbjct: 74  RGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPG----- 133

Query: 216 MENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYL 275
               G  +   AI D++   + DV TI  G+A   A+++L  GTKG R   PN+   ++ 
Sbjct: 134 ----GSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQ 193

Query: 276 PKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKDVQRPKYFSPQEAIDY 335
           P +  +SG  ID+ I+A+E+  N +    ++A  T +  E++ KD+ R +Y SP EA++Y
Sbjct: 194 P-LGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEY 250

Query: 336 GLVDKII 343
           GL+D +I
Sbjct: 254 GLIDGVI 250

[Close]
BLAST of Cp4.1LG04g07570 vs. TAIR10
Match: AT5G23140.1 (AT5G23140.1 nuclear-encoded CLP protease P7)

HSP 1 Score: 114.4 bits (285), Expect = 1.6e-25
Identity = 64/185 (34.59%), Postives = 103/185 (55.68%), Query Frame = 1 

Query: 161 DLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVG 220
           D+ S LL  RI+ +  PI    + ++VAQ ++L+ +NPSKPI++Y+NSPG         G
Sbjct: 48  DIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPG---------G 107

Query: 221 FETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSR 280
             T   AI D M Y +  + TI  G A   A++LL+ G KG R   PN++  ++ P    
Sbjct: 108 HVTAGLAIYDTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPS-GG 167

Query: 281 SSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKDVQRPKYFSPQEAIDYGLVDK 340
            SG   D+ I  +++    D   EL  K TG+P + +A ++ R  + +P+EA  +G++D+
Sbjct: 168 YSGQAKDITIHTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDE 222

Query: 341 IISSR 346
           +I  R
Sbjct: 228 VIDER 222

[Close]
BLAST of Cp4.1LG04g07570 vs. NCBI nr
Match: gi|659110063|ref|XP_008455029.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic [Cucumis melo])

HSP 1 Score: 625.5 bits (1612), Expect = 5.9e-176
Identity = 312/380 (82.11%), Postives = 346/380 (91.05%), Query Frame = 1 

Query: 1   MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFLSPSAKKSMDHIPKQ 60
           MATSS  H+SA PSLA+ SSKSSFL GT LP PSSR RTS RRY LSPSA++SMDHIPKQ
Sbjct: 1   MATSSLFHLSAPPSLAIDSSKSSFLCGTQLPLPSSRLRTSCRRYVLSPSAQQSMDHIPKQ 60

Query: 61  FREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLNN 120
           FR ENLKDGL+ENY+N P+ LYGLTPSQ+DMFMTEDNPVRRQSELVTE++ISS+++YLN+
Sbjct: 61  FRGENLKDGLIENYKNAPKYLYGLTPSQMDMFMTEDNPVRRQSELVTEQNISSSYNYLNH 120

Query: 121 GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP 180
           GGMWSL+GMDGK GP+KYSMS SMYRGGGR  GR ++APPDLPSLLLDARIVYLGMPIVP
Sbjct: 121 GGMWSLTGMDGK-GPAKYSMSVSMYRGGGRAAGRPRNAPPDLPSLLLDARIVYLGMPIVP 180

Query: 181 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY 240
           AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKME VG ETEAYA+ DMM+YCK DVY
Sbjct: 181 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMETVGSETEAYALGDMMSYCKSDVY 240

Query: 241 TINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTD 300
           T+N GMAFGQAAMLLSLGTKGYRA+QPNSS KLYLPKV+RSSG VIDMWIKA+ELDANT+
Sbjct: 241 TVNVGMAFGQAAMLLSLGTKGYRALQPNSSTKLYLPKVNRSSGTVIDMWIKAKELDANTE 300

Query: 301 YYIELLAKGTGKPAEEIAKDVQRPKYFSPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ 360
           YY+ELLAKG GKP EEI KD+QR KYF  QEAIDYG+ DKII+S+DSAFEKRNYD+MLAQ
Sbjct: 301 YYLELLAKGIGKPKEEITKDIQRSKYFQAQEAIDYGIADKIITSQDSAFEKRNYDEMLAQ 360

Query: 361 SRAMRKGAGGNPQAAPSGLR 381
           S+A R+GAGGNPQAAP+G R
Sbjct: 361 SKAARRGAGGNPQAAPTGFR 379

[Close]
BLAST of Cp4.1LG04g07570 vs. NCBI nr
Match: gi|778724882|ref|XP_011658880.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic [Cucumis sativus])

HSP 1 Score: 577.8 bits (1488), Expect = 1.4e-161
Identity = 292/380 (76.84%), Postives = 331/380 (87.11%), Query Frame = 1 

Query: 1   MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFLSPSAKKSMDHIPKQ 60
           MATSS  H+SA PSL++GSSKSSFLFGT LP P S  R S RRY LSP A++SMDHIPKQ
Sbjct: 1   MATSSLFHLSAPPSLSIGSSKSSFLFGTQLPLPPSCSRISRRRYVLSPHAQQSMDHIPKQ 60

Query: 61  FREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLNN 120
           FREENLKDGL+ENY+NVPQ LYGLTPSQ+DMFMTEDNPV+RQSELV EE ISSA++YLN+
Sbjct: 61  FREENLKDGLIENYKNVPQYLYGLTPSQMDMFMTEDNPVQRQSELVNEEKISSAYNYLNH 120

Query: 121 GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP 180
           GGMWSL+GMDGK GP KYSMS +MYRGGG G  R +S+PPDLP+LLLDARI+YLGMPIVP
Sbjct: 121 GGMWSLTGMDGK-GPDKYSMSVNMYRGGGGG--RPRSSPPDLPTLLLDARIIYLGMPIVP 180

Query: 181 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY 240
           AVTEL+VAQFMWLDYDNP+KPIYLYINS GTQ+E  E VG ETEAYAIADMM+YCK DVY
Sbjct: 181 AVTELIVAQFMWLDYDNPTKPIYLYINSSGTQDENRELVGSETEAYAIADMMSYCKSDVY 240

Query: 241 TINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTD 300
           TIN  MA+GQAAMLLSLGTKGYRA+QPN+S KLYLPKV+ SSG+ IDMWIKA+ELDANT+
Sbjct: 241 TINLAMAYGQAAMLLSLGTKGYRALQPNASTKLYLPKVNNSSGSAIDMWIKAKELDANTE 300

Query: 301 YYIELLAKGTGKPAEEIAKDVQRPKYFSPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ 360
           YY+ELLAKG GKP EEI KD+Q  KYF PQEAIDYG+ DKII   D A+EK+NYD+ML+Q
Sbjct: 301 YYLELLAKGIGKPKEEINKDIQLSKYFKPQEAIDYGIADKIIKPEDPAYEKKNYDEMLSQ 360

Query: 361 SRA--MRKGAGGNPQAAPSG 379
           S+A   R+G G NPQAAP+G
Sbjct: 361 SKAANARRGRGVNPQAAPTG 377

[Close]
BLAST of Cp4.1LG04g07570 vs. NCBI nr
Match: gi|590687306|ref|XP_007042627.1| (ATP-dependent Clp protease proteolytic subunit [Theobroma cacao])

HSP 1 Score: 575.9 bits (1483), Expect = 5.3e-161
Identity = 302/385 (78.44%), Postives = 331/385 (85.97%), Query Frame = 1 

Query: 1   MATSSPLHISATPSLAVGS----SKSSFLFGTHLPFPSSRPRT-SYRRYFLSPSAKKSMD 60
           MATS    ++A    AVG     SKS FL GT L F    PR  +  R + +P AK S+D
Sbjct: 1   MATSLLSPLTAPNPEAVGPNIRLSKSCFLSGTKLFFLKPHPRKPTAHRCYTTPFAK-SLD 60

Query: 61  HIPKQFREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAH 120
           HIPKQFR+ENLKDGLM+N++NVPQ LYGL+PSQ+DMFMTEDNPVRRQSE VTEESISSA 
Sbjct: 61  HIPKQFRQENLKDGLMDNFKNVPQYLYGLSPSQMDMFMTEDNPVRRQSERVTEESISSAR 120

Query: 121 SYLNNGGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLG 180
           +YL+NGGMWS+SG + + GPSKYSMS SMYRGG RGYGR ++APPDLPSLLLDARI YLG
Sbjct: 121 NYLDNGGMWSMSGSNDR-GPSKYSMSVSMYRGGARGYGRPRTAPPDLPSLLLDARICYLG 180

Query: 181 MPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYC 240
           MPIVPAVTELLVAQFMWLDYDNPSKPIYLYINS GTQNEKME VG ETEAYAIAD MAYC
Sbjct: 181 MPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSSGTQNEKMETVGSETEAYAIADTMAYC 240

Query: 241 KPDVYTINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKAREL 300
           K DVYT+NCGMA+GQAAMLLSLG KG+RAVQPNSS KLYLPKV+RSSGAVIDMWIKA+EL
Sbjct: 241 KADVYTVNCGMAYGQAAMLLSLGAKGFRAVQPNSSTKLYLPKVNRSSGAVIDMWIKAKEL 300

Query: 301 DANTDYYIELLAKGTGKPAEEIAKDVQRPKYFSPQEAIDYGLVDKIISSRDSAFEKRNYD 360
           DANT+YYIELLAKGTGK  EEIAKDVQRPKYF  QEAIDYGLVDKII SRD+AFEKRNYD
Sbjct: 301 DANTEYYIELLAKGTGKTEEEIAKDVQRPKYFQAQEAIDYGLVDKIIDSRDAAFEKRNYD 360

Query: 361 DMLAQSRAMRKGAGGNPQAAPSGLR 381
           +MLAQS+AMR+GAG  PQAAPSG R
Sbjct: 361 EMLAQSKAMRRGAGFGPQAAPSGFR 383

[Close]
BLAST of Cp4.1LG04g07570 vs. NCBI nr
Match: gi|661899277|emb|CDO97271.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 575.1 bits (1481), Expect = 9.1e-161
Identity = 294/367 (80.11%), Postives = 320/367 (87.19%), Query Frame = 1 

Query: 16  AVGSSKSSFLFGTHLPFPSSR-PRT-SYRRYFLSPSAKKSMDHIPKQFREENLKDGLMEN 75
           ++G  KSSF     L F S R P+T S RR        KS+DHIPK+FREENLKDGLM+N
Sbjct: 29  SIGLRKSSFFPDPKLVFASPRKPKTNSVRRCCYRAPVAKSLDHIPKRFREENLKDGLMDN 88

Query: 76  YENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLNNGGMWSLSGMDGKK 135
           Y+N PQ LYGLTPSQ+DMFMTEDNPVRRQ+E VTEESISSA +YLNNGGMWS+SGMD ++
Sbjct: 89  YKNTPQYLYGLTPSQMDMFMTEDNPVRRQAERVTEESISSACNYLNNGGMWSMSGMD-ER 148

Query: 136 GPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWL 195
           GPSKYSMS SMYRGG RGYGR ++APPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWL
Sbjct: 149 GPSKYSMSVSMYRGGARGYGRPRTAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWL 208

Query: 196 DYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAM 255
           DYDNPSKPIYLYINS GTQNEKME VG ETEAYAIAD MAYCK DVYT+NCGMA+GQAAM
Sbjct: 209 DYDNPSKPIYLYINSSGTQNEKMETVGSETEAYAIADTMAYCKSDVYTVNCGMAYGQAAM 268

Query: 256 LLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKP 315
           LL+LGTKGYRAVQPN S KLYLPKVSRSSGAVIDMWIKA+ELDANT+YYIELLAKG GKP
Sbjct: 269 LLALGTKGYRAVQPNCSTKLYLPKVSRSSGAVIDMWIKAKELDANTEYYIELLAKGIGKP 328

Query: 316 AEEIAKDVQRPKYFSPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQSRAMRKGAGGNPQ 375
            EEI KDVQRPKYF  QEAIDYG+ DKII SRD AF+KRNY++MLAQS+AMR+ AG  PQ
Sbjct: 329 KEEIEKDVQRPKYFQAQEAIDYGIADKIIDSRDVAFDKRNYEEMLAQSKAMRRTAGAGPQ 388

Query: 376 AAPSGLR 381
           AAPSGLR
Sbjct: 389 AAPSGLR 394

[Close]
BLAST of Cp4.1LG04g07570 vs. NCBI nr
Match: gi|645261514|ref|XP_008236328.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic [Prunus mume])

HSP 1 Score: 571.2 bits (1471), Expect = 1.3e-159
Identity = 298/394 (75.63%), Postives = 333/394 (84.52%), Query Frame = 1 

Query: 1   MATSSPLHISATPSLAVGSSK------------SSFLFGTHL--PFPSSRPRTSYRRYFL 60
           MATS   H+SA PS A+ + +            ++FL GT +    PSS  R + +R F 
Sbjct: 1   MATSLLSHLSAPPSPAIDNYQGRQAVAFNSGIPNTFLHGTKVFSATPSSSRRLAAQRRFK 60

Query: 61  SPSAKKSMDHIPKQFREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELV 120
           S  AK S +HIPKQFR+ENLKDGLM+NY+NVP  LYGL+PSQ+DMFMTEDNP RRQSE V
Sbjct: 61  SAYAKAS-EHIPKQFRQENLKDGLMDNYKNVPHYLYGLSPSQMDMFMTEDNPARRQSEKV 120

Query: 121 TEESISSAHSYLNNGGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLL 180
           TE+SISSA++YLN+GGMWS+SGMD  KGPSKYSMS SMYRGG RGYGR ++APPDLPSLL
Sbjct: 121 TEQSISSANNYLNHGGMWSMSGMD-DKGPSKYSMSVSMYRGGARGYGRPRTAPPDLPSLL 180

Query: 181 LDARIVYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAY 240
           LDARI YLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINS GTQNEKME+VG ETEAY
Sbjct: 181 LDARICYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSSGTQNEKMESVGSETEAY 240

Query: 241 AIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVI 300
           AIADMM+Y K DVYT+NCGMAFGQAA+LLSLGT+GYRAVQPNSS KLYLPKVSRSSG+VI
Sbjct: 241 AIADMMSYVKSDVYTVNCGMAFGQAALLLSLGTRGYRAVQPNSSTKLYLPKVSRSSGSVI 300

Query: 301 DMWIKARELDANTDYYIELLAKGTGKPAEEIAKDVQRPKYFSPQEAIDYGLVDKIISSRD 360
           DMWIKA+ELDANT+YYIELLAKGTGK  EEIAKD+QRPKYF  QEAI+YGLVDKII SRD
Sbjct: 301 DMWIKAKELDANTEYYIELLAKGTGKTKEEIAKDIQRPKYFQGQEAIEYGLVDKIIDSRD 360

Query: 361 SAFEKRNYDDMLAQSRAMRKGAGGNPQAAPSGLR 381
           +AFEKRNYD+ML QSRAMR+   G PQAAPSG R
Sbjct: 361 AAFEKRNYDEMLTQSRAMRRAGAGGPQAAPSGFR 392

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g07570 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CLPR1_ARATH8.8e-14071.94ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ... [more]
CLPR3_ARATH9.1e-4444.76ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ... [more]
CLPR_SYNE71.6e-4345.00Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus el... [more]
CLPR4_ARATH2.0e-4343.07ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ... [more]
CLPR_SYNY36.5e-4245.23Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp... [more]
BLAST of Cp4.1LG04g07570 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4G3_CUCSA9.8e-16276.84ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=Csa_7G07143... [more]
A0A061E852_THECC3.7e-16178.44ATP-dependent Clp protease proteolytic subunit OS=Theobroma cacao GN=TCM_007216 ... [more]
A0A068TM43_COFCA6.3e-16180.11ATP-dependent Clp protease proteolytic subunit OS=Coffea canephora GN=GSCOC_T000... [more]
W9RKX6_9ROSA2.0e-15974.76ATP-dependent Clp protease proteolytic subunit OS=Morus notabilis GN=L484_003683... [more]
M5VJ49_PRUPE1.3e-15875.13ATP-dependent Clp protease proteolytic subunit OS=Prunus persica GN=PRUPE_ppa006... [more]
BLAST of Cp4.1LG04g07570 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G49970.15.0e-14171.94 CLP protease proteolytic subunit 1[more]
AT1G09130.35.1e-4544.76 ATP-dependent caseinolytic (Clp) protease/crotonase family protein[more]
AT4G17040.11.1e-4443.07 CLP protease R subunit 4[more]
AT5G45390.11.1e-2636.36 CLP protease P4[more]
AT5G23140.11.6e-2534.59 nuclear-encoded CLP protease P7[more]
BLAST of Cp4.1LG04g07570 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110063|ref|XP_008455029.1|5.9e-17682.11PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 1, chl... [more]
gi|778724882|ref|XP_011658880.1|1.4e-16176.84PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 1, chl... [more]
gi|590687306|ref|XP_007042627.1|5.3e-16178.44ATP-dependent Clp protease proteolytic subunit [Theobroma cacao][more]
gi|661899277|emb|CDO97271.1|9.1e-16180.11unnamed protein product [Coffea canephora][more]
gi|645261514|ref|XP_008236328.1|1.3e-15975.63PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 1, chl... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: INTERPRO
TermDefinition
IPR023562ClpP/TepA
IPR001907ClpP
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009840 chloroplastic endopeptidase Clp complex
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0005575 cellular_component
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g07570.1Cp4.1LG04g07570.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001907ATP-dependent Clp protease proteolytic subunitPRINTSPR00127CLPPROTEASEPcoord: 161..176
score: 6.9E-14coord: 241..258
score: 6.9E-14coord: 201..221
score: 6.9E-14coord: 320..339
score: 6.9
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPANTHERPTHR10381ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNITcoord: 82..380
score: 2.4E
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPFAMPF00574CLP_proteasecoord: 161..344
score: 2.5
NoneNo IPR availablePANTHERPTHR10381:SF18SUBFAMILY NOT NAMEDcoord: 82..380
score: 2.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g07570Cucsa.219200Cucumber (Gy14) v1cgycpeB0602
Cp4.1LG04g07570CmaCh11G017020Cucurbita maxima (Rimu)cmacpeB154
Cp4.1LG04g07570CmoCh11G014160Cucurbita moschata (Rifu)cmocpeB126
Cp4.1LG04g07570Cla016089Watermelon (97103) v1cpewmB665
Cp4.1LG04g07570Csa7G071430Cucumber (Chinese Long) v2cpecuB695
Cp4.1LG04g07570MELO3C018514Melon (DHL92) v3.5.1cpemeB604
Cp4.1LG04g07570ClCG02G006760Watermelon (Charleston Gray)cpewcgB590
Cp4.1LG04g07570CSPI07G06900Wild cucumber (PI 183967)cpecpiB697
Cp4.1LG04g07570Lsi03G005720Bottle gourd (USVL1VR-Ls)cpelsiB543
Cp4.1LG04g07570MELO3C018514.2Melon (DHL92) v3.6.1cpemedB715
Cp4.1LG04g07570CsaV3_7G007880Cucumber (Chinese Long) v3cpecucB0868
Cp4.1LG04g07570Bhi05G000894Wax gourdcpewgoB0847
Cp4.1LG04g07570CsGy7G006440Cucumber (Gy14) v2cgybcpeB969
Cp4.1LG04g07570Carg23034Silver-seed gourdcarcpeB1033
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g07570Wax gourdcpewgoB0860
Cp4.1LG04g07570Wax gourdcpewgoB0879
Cp4.1LG04g07570Cucurbita pepo (Zucchini)cpecpeB133
Cp4.1LG04g07570Cucurbita pepo (Zucchini)cpecpeB269
Cp4.1LG04g07570Cucurbita pepo (Zucchini)cpecpeB400
Cp4.1LG04g07570Cucurbita pepo (Zucchini)cpecpeB497
Cp4.1LG04g07570Cucurbita pepo (Zucchini)cpecpeB500
Cp4.1LG04g07570Cucurbita maxima (Rimu)cmacpeB539
Cp4.1LG04g07570Cucurbita maxima (Rimu)cmacpeB749
Cp4.1LG04g07570Cucurbita moschata (Rifu)cmocpeB321
Cp4.1LG04g07570Cucurbita moschata (Rifu)cmocpeB494
Cp4.1LG04g07570Cucurbita moschata (Rifu)cmocpeB703
Cp4.1LG04g07570Bottle gourd (USVL1VR-Ls)cpelsiB552
Cp4.1LG04g07570Cucumber (Gy14) v2cgybcpeB237
Cp4.1LG04g07570Melon (DHL92) v3.6.1cpemedB746
Cp4.1LG04g07570Melon (DHL92) v3.6.1cpemedB771
Cp4.1LG04g07570Silver-seed gourdcarcpeB0266
Cp4.1LG04g07570Silver-seed gourdcarcpeB0409
Cp4.1LG04g07570Silver-seed gourdcarcpeB0529
Cp4.1LG04g07570Silver-seed gourdcarcpeB0639
Cp4.1LG04g07570Cucumber (Chinese Long) v3cpecucB0834
Cp4.1LG04g07570Cucumber (Chinese Long) v3cpecucB0847