Carg23034 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23034
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ATP-dependent Clp protease proteolytic subunit
Location	Cucurbita_argyrosperma_scaffold_163 : 64683 .. 69151 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCAGAGAAGAAGTTGAAGACCTCAAAAAATTTATCGGCAAAATCCGGCCAAGCTTCACACCTGGCCTTCTCCATGGCGACATCTTCACCTCTTCATATCTCTGCTACGCCGTCGTTGGCCGTCGGCAGCTCAAAGTCATCATTTCTTTTCGGTACCCATCTCCCTTTCCCGTCCTCTCGCCCAAGAACTTCATATCGCAGATACTTTCTTTCTCCCTCTGCCAAAAAATCGATGGACCACATTCCTAAGCAATTCAGAGAAGAGAATCTCAAAGATGGCTGTAAGTTTCCGATATTGAACTGTCTGGCCGGAATCATTATATCATTTGAAGTTATTTATTTGATTCCGTTCGTTTTCTGATGAAATTAATTGATTGTTTGGTAACTTGGAAAATTTCTGTTCGTTCTGCGTTTTCTTTTCATGTGTTCTTGATGATTTGTGGTGGTCTTTCGATGGCCGGAGATTTTGGAGAGAGTAAATTTAATCTTGTATTAATAATAGTTTAAGACAGAGTGCAACTGGTCGACAGTAAACTGAAATTGCTACCTCATTGGGGAGTTGTCTTTGAATCCACGTTCATTTTTCTTTTGTTAATTCTAGTTCCATCGTTATTTTCATGAGTTTGATCCTGACGAAAATAAACAATATCATTGCCTAAATCTCCATATCTCCTGTTCTTATAGTGATGGAGAACTACGAGAACGTTCCTCAATCACTTTATGGCCTTACACCTTCACAACTGGACATGTTCATGACAGAAGATAATCCTGTCAGGCGACAGTCAGAATTAGTTACTGAGGTTCTTTTCTCATTTGATCTTGAGAGTTCAGTAATTTCTATAAATTTGCAAATCCATAGAAACAGGCACATTTACTTTTTGCTGGAAGCTCAGTATTGTTCAAGCCAAGCATTATTATTGTGCTTTATTAACCACAACGATTGCTTGTTACCTGGCAGGAAAGCATCTCATCCGCCCACAGCTATTTGACTAATGGTGGAATGTGGAGTCTATCAGGCATGGATGGAAAAAAGGGTCCATCAAAATATAGTATGAGCGCTAGTATGTATCGTGGGGGAGGAAGGGGATATGGGCGACGCCAATCAGCTCCTCCTGATTTGCCTTCTTTGCTCTTGGACGCTCGTATAGTCTATTTGGGCATGCCCGTGAGCCACTAAAATATTTATTCTTTACTCAATTCTGCTTTGCAAGATATTTTTTCTCAGGGGTACATCACTGTATTTTGTTGAAATAAATGCAGATCGTACCAGCAGTGACTGAGCTTCTTGTTGCTCAGTTTATGTGGCTAGACTATGATAACCCATCAAAGCCTATATATCTCTACATAAACTCTCCGGGGACGCAGGTTATTAATTGATATTTCCTTAATCCATGAAGTATTATATTTCCTGTTCTAATGAAGCTTGTAGTATCGTTGTAATTTTCATTGTTTTGACCATCTTGTTATTTTAATATTCAAGACCTAGTTTTTGTTGCTTTGGTGCTTGTTGATAACTTAGAATGAGAAGATGGAGAATGTTGGATTCGAAACTGAAGCATATGCTATAGCAGATATGATGGCTGTAAGTAGTCTCTTCCTTAACTGAACTTAATTCCTTTTGTCCAATATTTGTCATTGAATAACTACGTATCTGGTCTTTGAATTTTTTGGTAAAATGCATTCCTTGAAAGAAAAAAAAAAAAAAATTGATCAGTAAGAAAAATGGAAGTTGGGGAGGTTATAAAAATAAAAAGAAGGCAACGACCATCATAGGAGCCGCCAAAAATGAACAAACAGGAATCGATATTACAAGAGAGATCCGGTTGCTGGTAGTAAAAGCAAAGGGAAATCTCTATAAGAATCGATGGCAGAAATCAAAAGGAAGTGTTGAAGTGAGCATATGCCATATCTTTCCCATAGAGAGCATTCCCCTCTTGAAAGATCTTATGTTCCTTGCTGCCAAGTATTCCTTAAGATAGCGAAAAAAACAGCCTACTATGATGGCCCTCCTTCATTCTAAAACAGGAGTTATAGAAGGATTTCCATCCGATATTGACTGATAGTACCAACTTTAGGCTGGTCTTCAAAAACCTCCCTAAACATAAGCAGAAAAAAAGTAATGTCAAAGCCTGTGATTCTTTTGCCCCGACATTACCCCGCCCCGCCCCTAGAGTTAGTATACCAATGTGGACCTAAGCTCGAAGTAGTTAATATTGGGTTAAAGAGTACGGTGTTAATTCTTCCCATGTATGACGAGCCAGGCACAGAGCTTTGTCTTCTTCAAGATGGATATTAACCTTCTACAGCTTACCGAGTTTATGAAACACACCTATTGGAAGAAGTTTTATTTCTTCTTTTTGTTTTATTTATATTTATTTATTTATTTATTTTTTTGCAAGCTAAAGCCCAAGTAGACGAGATGTTCCTTTGCCTACAAGATATCAAATAAAACAAACTATAACAGCCCAAGCCCATCGCTAGCAAATATTGTCCTCTTTAGGCTTTCCCTTTTGGGCTTCTCCTCAAGATTTTAAAATGTGTTTGCTAGGGGAGATGTTTCCACACCCTTTATAAGGAATGCTTCGTTCCCCTCTCCAACGAATGTGGGATCTCACAATCCACCCCTCTGGGGGCCCAACGTCCTCGCTGGCACACCGCCCATTGTCTGACTCTGATACCATTTGTAACCGCCCAAACTCACCTCTAGCAAATATTGTCCTCTTTGGGCTTTCCCTTCTGGGCTTTTCCTCAAGGTTTTAAAACGCGTCTACTAGGGAGAGGTTTCATACCCTTACAAGAAATGCTTCATTTCTCTCTCCAACTAAGGTGAGGTTTCATACCAGGACACTGTGTCCTGATTGGAAAAAGATTTATAATTTAAGAACTGATTGGAAAAAGATTTATAATTTAAGAAATTCCAAATGACTTGGGGTGGAAGATAGCTCCTTGAATGAAGGATTAAAAGGGAAATATACCAGCTTCATCCCCTTTATCACGTAAAGCTTTCTTACATTGGAAGTAAACCGAGGACCCAGAGACATTTTCTCCTACCTGATGATAGCTTATTAATCCATCAACGTCGGCTGCTAAATTATTTTATGATAAGTAAACATGTGCCAAAATAAAACCGTATCAATAGTTTATGATTTAGTTACTTCGTTGTTTTTATTATGCCATCAACAAGGTCTCAGCTTAATTCTTTTTACATCTGTGTAGTATTGCAAACCGGATGTCTATACTATAAACTGCGGAATGGCATTCGGTCAAGCAGCAATGCTTTTGTCACTTGGAACCAAGGGTTACCGTGCTGTCCAGCCTAACTCCTCCGGCACGTTCCTCGCCTCTTAAAACTGATATATAATTCTTTCATTTTGCATAATTCTGCATTCTCATCAACCATCCAGGATTATGGTAACTTGTTTTTCCTGGCTCGCGAGGATCATTCCCTTCCTTTTTGACCATTGTCTTTCATAATTGCAGCTAAACTGTATCTGCCTAAAGTTAGTAGATCAAGTGGTGCGGTCATAGATATGTGGATTAAGGTACGCATACTTCCCTCTCTCTGTTGAGCTTTAGCCAGTCTCTCCCTCTCATTTTCCTGGAACTCGTGTCTTAGGCCAGAGAACTCGATGCCAACACCGATTACTATATCGAGCTATTAGCTAAAGGAACTGGTAAACCCGCGGAAGAGATTGCTAAAGATATTCAACGACCCAAGTACTTAAATCCCCAAGAAGCCATTGACTATGGCCTTGTAGACAAGATAATCAGCTCGCGGGATTCTGCGTTCGAAAAGAGGGTCATTATCACATACATTTCTCTCTCTCTCTCTCGTTTTCTTTTAAGATGCTTTGAATTTCGTCACGCAAGTCTAACATTTTGCTTCTACAATCAGAACTACGACGATATGCTTGCGCAGTCGAGAGCCATGAGGAAAGGAGCCGGAGGCAATCCACAAGCCGCGCCATCCGGGTTGAGGTAATTCAGAAGTGTAGAAATAGAAGGATACATAACCCCACTCTTTCATAGCTATAGCTGCTACCCCCTGGATGGGCTTTATAATTCTTTCTTTCTTGGGGTGGGGTGTTTTGGTTTACTTATGAAGGACTTGACTAATGAATGAACATCAGCAATGTTATCTTTATAGGCGGTTTGTATATTGAAAAACTCTCTCATTTAGGTTTAGTTCTGTGTTTTTAAGGTTATTATGATTTTGTGACGTTTACTCAATGCTCTTGCAATCGTATGTGAGCCAGTCCTTGCTAGAGAACGTTCCTTCGTTTCAAGCTGCCTGTCTGTTCATTCGTTTTAGTCCCCTATAAGATCTTTCTTATTATGATTCGAACATCCGACTAAAATTTAAACTCTAATTCTCTAAATAAGAGAAGTATCGGGATATCTCATTTGGTCAACCAAAGGTCTTATTTAAGTGACTTTCGACAAATATTTGTCATAATTAAGTAATATAT

mRNA sequence

ATCAGAGAAGAAGTTGAAGACCTCAAAAAATTTATCGGCAAAATCCGGCCAAGCTTCACACCTGGCCTTCTCCATGGCGACATCTTCACCTCTTCATATCTCTGCTACGCCGTCGTTGGCCGTCGGCAGCTCAAAGTCATCATTTCTTTTCGGTACCCATCTCCCTTTCCCGTCCTCTCGCCCAAGAACTTCATATCGCAGATACTTTCTTTCTCCCTCTGCCAAAAAATCGATGGACCACATTCCTAAGCAATTCAGAGAAGAGAATCTCAAAGATGGCTTGATGGAGAACTACGAGAACGTTCCTCAATCACTTTATGGCCTTACACCTTCACAACTGGACATGTTCATGACAGAAGATAATCCTGTCAGGCGACAGTCAGAATTAGTTACTGAGGAAAGCATCTCATCCGCCCACAGCTATTTGACTAATGGTGGAATGTGGAGTCTATCAGGCATGGATGGAAAAAAGGGTCCATCAAAATATAGTATGAGCGCTAGTATGTATCGTGGGGGAGGAAGGGGATATGGGCGACGCCAATCAGCTCCTCCTGATTTGCCTTCTTTGCTCTTGGACGCTCGTATAGTCTATTTGGGCATGCCCATCGTACCAGCAGTGACTGAGCTTCTTGTTGCTCAGTTTATGTGGCTAGACTATGATAACCCATCAAAGCCTATATATCTCTACATAAACTCTCCGGGGACGCAGAATGAGAAGATGGAGAATGTTGGATTCGAAACTGAAGCATATGCTATAGCAGATATGATGGCTTATTGCAAACCGGATGTCTATACTATAAACTGCGGAATGGCATTCGGTCAAGCAGCAATGCTTTTGTCACTTGGAACCAAGGGTTACCGTGCTGTCCAGCCTAACTCCTCCGCTAAACTGTATCTGCCTAAAGTTAGTAGATCAAGTGGTGCGGTCATAGATATGTGGATTAAGGCCAGAGAACTCGATGCCAACACCGATTACTATATCGAGCTATTAGCTAAAGGAACTGGTAAACCCGCGGAAGAGATTGCTAAAGATATTCAACGACCCAAGTACTTAAATCCCCAAGAAGCCATTGACTATGGCCTTGTAGACAAGATAATCAGCTCGCGGGATTCTGCGTTCGAAAAGAGGAACTACGACGATATGCTTGCGCAGTCGAGAGCCATGAGGAAAGGAGCCGGAGGCAATCCACAAGCCGCGCCATCCGGGTTGAGGTAATTCAGAAGTGTAGAAATAGAAGGATACATAACCCCACTCTTTCATAGCTATAGCTGCTACCCCCTGGATGGGCTTTATAATTCTTTCTTTCTTGGGGTGGGGTGTTTTGGTTTACTTATGAAGGACTTGACTAATGAATGAACATCAGCAATGTTATCTTTATAGGCGGTTTGTATATTGAAAAACTCTCTCATTTAGGTTTAGTTCTGTGTTTTTAAGGTTATTATGATTTTGTGACGTTTACTCAATGCTCTTGCAATCGTATGTGAGCCAGTCCTTGCTAGAGAACGTTCCTTCGTTTCAAGCTGCCTGTCTGTTCATTCGTTTTAGTCCCCTATAAGATCTTTCTTATTATGATTCGAACATCCGACTAAAATTTAAACTCTAATTCTCTAAATAAGAGAAGTATCGGGATATCTCATTTGGTCAACCAAAGGTCTTATTTAAGTGACTTTCGACAAATATTTGTCATAATTAAGTAATATAT

Coding sequence (CDS)

ATGGCGACATCTTCACCTCTTCATATCTCTGCTACGCCGTCGTTGGCCGTCGGCAGCTCAAAGTCATCATTTCTTTTCGGTACCCATCTCCCTTTCCCGTCCTCTCGCCCAAGAACTTCATATCGCAGATACTTTCTTTCTCCCTCTGCCAAAAAATCGATGGACCACATTCCTAAGCAATTCAGAGAAGAGAATCTCAAAGATGGCTTGATGGAGAACTACGAGAACGTTCCTCAATCACTTTATGGCCTTACACCTTCACAACTGGACATGTTCATGACAGAAGATAATCCTGTCAGGCGACAGTCAGAATTAGTTACTGAGGAAAGCATCTCATCCGCCCACAGCTATTTGACTAATGGTGGAATGTGGAGTCTATCAGGCATGGATGGAAAAAAGGGTCCATCAAAATATAGTATGAGCGCTAGTATGTATCGTGGGGGAGGAAGGGGATATGGGCGACGCCAATCAGCTCCTCCTGATTTGCCTTCTTTGCTCTTGGACGCTCGTATAGTCTATTTGGGCATGCCCATCGTACCAGCAGTGACTGAGCTTCTTGTTGCTCAGTTTATGTGGCTAGACTATGATAACCCATCAAAGCCTATATATCTCTACATAAACTCTCCGGGGACGCAGAATGAGAAGATGGAGAATGTTGGATTCGAAACTGAAGCATATGCTATAGCAGATATGATGGCTTATTGCAAACCGGATGTCTATACTATAAACTGCGGAATGGCATTCGGTCAAGCAGCAATGCTTTTGTCACTTGGAACCAAGGGTTACCGTGCTGTCCAGCCTAACTCCTCCGCTAAACTGTATCTGCCTAAAGTTAGTAGATCAAGTGGTGCGGTCATAGATATGTGGATTAAGGCCAGAGAACTCGATGCCAACACCGATTACTATATCGAGCTATTAGCTAAAGGAACTGGTAAACCCGCGGAAGAGATTGCTAAAGATATTCAACGACCCAAGTACTTAAATCCCCAAGAAGCCATTGACTATGGCCTTGTAGACAAGATAATCAGCTCGCGGGATTCTGCGTTCGAAAAGAGGAACTACGACGATATGCTTGCGCAGTCGAGAGCCATGAGGAAAGGAGCCGGAGGCAATCCACAAGCCGCGCCATCCGGGTTGAGGTAA

Protein sequence

MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFLSPSAKKSMDHIPKQFREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTNGGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKDIQRPKYLNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQSRAMRKGAGGNPQAAPSGLR

Homology

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BLAST of Carg23034 vs. NCBI nr
Match: XP_022927727.1 (ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 751.1 bits (1938), Expect = 1.8e-213
Identity = 378/380 (99.47%), Postives = 378/380 (99.47%), Query Frame = 0


Query: 1   MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFLSPSAKKSMDHIPKQ 60
           MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYF SPSAKKSMDHIPKQ
Sbjct: 1   MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFFSPSAKKSMDHIPKQ 60

Query: 61  FREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTN 120
           FREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTN
Sbjct: 61  FREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTN 120

Query: 121 GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP 180
           GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP
Sbjct: 121 GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP 180

Query: 181 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY 240
           AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY
Sbjct: 181 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY 240

Query: 241 TINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTD 300
           TINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTD
Sbjct: 241 TINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTD 300

Query: 301 YYIELLAKGTGKPAEEIAKDIQRPKYLNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ 360
           YYIELLAKGTGKPAEEIAKDIQRPKY NPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ
Sbjct: 301 YYIELLAKGTGKPAEEIAKDIQRPKYFNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ 360

Query: 361 SRAMRKGAGGNPQAAPSGLR 381
           SRAMRKGAGGNPQAAPSGLR
Sbjct: 361 SRAMRKGAGGNPQAAPSGLR 380

[Close]

BLAST of Carg23034 vs. NCBI nr
Match: XP_023531549.1 (ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 748.4 bits (1931), Expect = 1.2e-212
Identity = 376/380 (98.95%), Postives = 378/380 (99.47%), Query Frame = 0


Query: 1   MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFLSPSAKKSMDHIPKQ 60
           MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFLSPSAKKSMDHIPKQ
Sbjct: 1   MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFLSPSAKKSMDHIPKQ 60

Query: 61  FREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTN 120
           FREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYL N
Sbjct: 61  FREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLNN 120

Query: 121 GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP 180
           GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP
Sbjct: 121 GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP 180

Query: 181 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY 240
           AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY
Sbjct: 181 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY 240

Query: 241 TINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTD 300
           TINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTD
Sbjct: 241 TINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTD 300

Query: 301 YYIELLAKGTGKPAEEIAKDIQRPKYLNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ 360
           YYIELLAKGTGKPAEEIAKD+QRPKY +PQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ
Sbjct: 301 YYIELLAKGTGKPAEEIAKDVQRPKYFSPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ 360

Query: 361 SRAMRKGAGGNPQAAPSGLR 381
           SRAMRKGAGGNPQAAPSGLR
Sbjct: 361 SRAMRKGAGGNPQAAPSGLR 380

[Close]

BLAST of Carg23034 vs. NCBI nr
Match: XP_022988818.1 (ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 744.6 bits (1921), Expect = 1.7e-211
Identity = 373/380 (98.16%), Postives = 375/380 (98.68%), Query Frame = 0


Query: 1   MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFLSPSAKKSMDHIPKQ 60
           MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFLSPSAKKSMDHIPKQ
Sbjct: 1   MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFLSPSAKKSMDHIPKQ 60

Query: 61  FREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTN 120
           FREENLKDGLMENY+N PQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTN
Sbjct: 61  FREENLKDGLMENYKNAPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTN 120

Query: 121 GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP 180
           GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP
Sbjct: 121 GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP 180

Query: 181 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY 240
           AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY
Sbjct: 181 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY 240

Query: 241 TINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTD 300
           TINCGMAFGQAAMLLSLGTKGYRA QPNSS KLYLPKVSRSSGAVIDMWIKARELDANTD
Sbjct: 241 TINCGMAFGQAAMLLSLGTKGYRAAQPNSSTKLYLPKVSRSSGAVIDMWIKARELDANTD 300

Query: 301 YYIELLAKGTGKPAEEIAKDIQRPKYLNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ 360
           YYIELLAKGTGKP EEIAKD+QRPKY NPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ
Sbjct: 301 YYIELLAKGTGKPVEEIAKDVQRPKYFNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ 360

Query: 361 SRAMRKGAGGNPQAAPSGLR 381
           SRAMRKGAGGNPQAAPSGLR
Sbjct: 361 SRAMRKGAGGNPQAAPSGLR 380

[Close]

BLAST of Carg23034 vs. NCBI nr
Match: XP_022148841.1 (ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic [Momordica charantia])

HSP 1 Score: 630.2 bits (1624), Expect = 4.6e-177
Identity = 319/381 (83.73%), Postives = 344/381 (90.29%), Query Frame = 0


Query: 1   MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFLSPSAK-KSMDHIPK 60
           MATSS  ++SA PSLA+ SSKS F+ GT L FPSSR RT+ RRYFLSPSAK  SMDHIPK
Sbjct: 1   MATSSLSNLSAPPSLAIDSSKSFFICGTQLSFPSSRSRTTCRRYFLSPSAKNSSMDHIPK 60

Query: 61  QFREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLT 120
           +FR ENLKDGLMENY+N PQ LYGLTPSQ+DMFMTEDNP+RRQSELVTEE+ISS+H+YL 
Sbjct: 61  KFRGENLKDGLMENYKNAPQYLYGLTPSQMDMFMTEDNPIRRQSELVTEENISSSHNYLN 120

Query: 121 NGGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIV 180
           +GGMWSLSGM+  KGPSKYSMS SMYRGGGRG GR ++APPDLPSLLLDARI YLGMPIV
Sbjct: 121 HGGMWSLSGMN-DKGPSKYSMSVSMYRGGGRGSGRPRTAPPDLPSLLLDARICYLGMPIV 180

Query: 181 PAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDV 240
           PAVTELLVAQFMWLDYDNPSKPIYLYINS GTQNEKME VG ETEAYAIADMMAYCK DV
Sbjct: 181 PAVTELLVAQFMWLDYDNPSKPIYLYINSSGTQNEKMETVGSETEAYAIADMMAYCKSDV 240

Query: 241 YTINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANT 300
           YT+NCGMA+GQAAMLLSLGTKGYRAVQPNSS KLYLPKV+RSSGAVIDMWIKA+ELDANT
Sbjct: 241 YTVNCGMAYGQAAMLLSLGTKGYRAVQPNSSTKLYLPKVNRSSGAVIDMWIKAKELDANT 300

Query: 301 DYYIELLAKGTGKPAEEIAKDIQRPKYLNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLA 360
           +YYIELLAKG GKP EEI KD+QRPKY   QEA+DYGL DKII S+DSAFEKRNYD+MLA
Sbjct: 301 EYYIELLAKGIGKPKEEITKDVQRPKYFQAQEAVDYGLADKIIDSQDSAFEKRNYDEMLA 360

Query: 361 QSRAMRKGAGGNPQAAPSGLR 381
           QSRAMRKG GGNPQAAPSG R
Sbjct: 361 QSRAMRKGVGGNPQAAPSGFR 380

[Close]

BLAST of Carg23034 vs. NCBI nr
Match: XP_008455029.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic [Cucumis melo])

HSP 1 Score: 622.1 bits (1603), Expect = 1.3e-174
Identity = 311/380 (81.84%), Postives = 344/380 (90.53%), Query Frame = 0


Query: 1   MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFLSPSAKKSMDHIPKQ 60
           MATSS  H+SA PSLA+ SSKSSFL GT LP PSSR RTS RRY LSPSA++SMDHIPKQ
Sbjct: 1   MATSSLFHLSAPPSLAIDSSKSSFLCGTQLPLPSSRLRTSCRRYVLSPSAQQSMDHIPKQ 60

Query: 61  FREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTN 120
           FR ENLKDGL+ENY+N P+ LYGLTPSQ+DMFMTEDNPVRRQSELVTE++ISS+++YL +
Sbjct: 61  FRGENLKDGLIENYKNAPKYLYGLTPSQMDMFMTEDNPVRRQSELVTEQNISSSYNYLNH 120

Query: 121 GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP 180
           GGMWSL+GMDG KGP+KYSMS SMYRGGGR  GR ++APPDLPSLLLDARIVYLGMPIVP
Sbjct: 121 GGMWSLTGMDG-KGPAKYSMSVSMYRGGGRAAGRPRNAPPDLPSLLLDARIVYLGMPIVP 180

Query: 181 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY 240
           AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKME VG ETEAYA+ DMM+YCK DVY
Sbjct: 181 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMETVGSETEAYALGDMMSYCKSDVY 240

Query: 241 TINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTD 300
           T+N GMAFGQAAMLLSLGTKGYRA+QPNSS KLYLPKV+RSSG VIDMWIKA+ELDANT+
Sbjct: 241 TVNVGMAFGQAAMLLSLGTKGYRALQPNSSTKLYLPKVNRSSGTVIDMWIKAKELDANTE 300

Query: 301 YYIELLAKGTGKPAEEIAKDIQRPKYLNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ 360
           YY+ELLAKG GKP EEI KDIQR KY   QEAIDYG+ DKII+S+DSAFEKRNYD+MLAQ
Sbjct: 301 YYLELLAKGIGKPKEEITKDIQRSKYFQAQEAIDYGIADKIITSQDSAFEKRNYDEMLAQ 360

Query: 361 SRAMRKGAGGNPQAAPSGLR 381
           S+A R+GAGGNPQAAP+G R
Sbjct: 361 SKAARRGAGGNPQAAPTGFR 379

[Close]

BLAST of Carg23034 vs. TAIR10
Match: AT1G49970.1 (CLP protease proteolytic subunit 1)

HSP 1 Score: 484.2 bits (1245), Expect = 7.4e-137
Identity = 254/360 (70.56%), Postives = 295/360 (81.94%), Query Frame = 0


Query: 23  SFLFGTHLPFPSSRPRTSYRRYFLSPSAKKSMDHIPKQFREENLKDGLMENYENVPQSLY 82
           S LF +++P  S+ PR + R +  + +   S DHIPKQFR +NLKDG+M+N++NVPQ  Y
Sbjct: 33  SKLFSSNMPC-STVPRRTRRSHCFASAKDMSFDHIPKQFRGDNLKDGVMQNFKNVPQYFY 92

Query: 83  GLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTNGGMWSLSGMDGKKGPSKYSMSA 142
           GL  +Q+DMFMTED+PVRRQ+E VTEESISS ++YL NGG+WS+SGM+      +YSMS 
Sbjct: 93  GLNSAQMDMFMTEDSPVRRQAEKVTEESISSRNNYLNNGGIWSMSGMNAADA-RRYSMSV 152

Query: 143 SMYRGGGRGYGRR--QSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLDYDNPSK 202
            MYR           ++APPDLPSLLLDARI YLGMPIVPAVTELLVAQFMWLDYDNP+K
Sbjct: 153 QMYRXXXXXXXXXXPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTK 212

Query: 203 PIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTK 262
           PIYLYINSPGTQNEKME VG ETEAYAIAD ++YCK DVYTINCGMAFGQAAMLLSLG K
Sbjct: 213 PIYLYINSPGTQNEKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKK 272

Query: 263 GYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKD 322
           GYRAVQP+SS KLYLPKV+RSSGA IDMWIKA+ELDANT+YYIELLAKGTGK  E+I +D
Sbjct: 273 GYRAVQPHSSTKLYLPKVNRSSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINED 332

Query: 323 IQRPKYLNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQSRAMRKGAGGNPQAAPSGLR 381
           I+RPKYL  Q AIDYG+ DKI  S+DS+FEKR+YD  LAQ RAMR G GG+P AAP+GLR
Sbjct: 333 IKRPKYLQAQAAIDYGIADKIADSQDSSFEKRDYDGTLAQ-RAMRPG-GGSP-AAPAGLR 387

[Close]

BLAST of Carg23034 vs. TAIR10
Match: AT1G09130.3 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein)

HSP 1 Score: 180.3 bits (456), Expect = 2.3e-45
Identity = 94/210 (44.76%), Postives = 139/210 (66.19%), Query Frame = 0


Query: 135 PSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLD 194
           P   S  A + R       R ++ PPDLPS+LLD RIVY+GMP+VPAVTEL+VA+ M+L 
Sbjct: 95  PQLMSSPAQVERSVAYNEHRPRTPPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQ 154

Query: 195 YDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAML 254
           + +P +PIY+YINS GT  +  E VG E+E +AI D +   K +V+T+  G A GQA +L
Sbjct: 155 WLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLL 214

Query: 255 LSLGTKGYRAVQPNSSAKLYLPKVSRSSGAV--IDMWIKARELDANTDYYIELLAKGTGK 314
           LS GTKG R + P++ A +  P+V  SSG +   D+ I+A+E+  N D  +ELL+K TG 
Sbjct: 215 LSAGTKGKRFMMPHAKAMIQQPRVP-SSGLMPASDVLIRAKEVITNRDILVELLSKHTGN 274

Query: 315 PAEEIAKDIQRPKYLNPQEAIDYGLVDKII 343
             E +A  ++RP Y++  +A ++G++D+I+
Sbjct: 275 SVETVANVMRRPYYMDAPKAKEFGVIDRIL 303

[Close]

BLAST of Carg23034 vs. TAIR10
Match: AT4G17040.1 (CLP protease R subunit 4)

HSP 1 Score: 174.9 bits (442), Expect = 9.7e-44
Identity = 85/202 (42.08%), Postives = 135/202 (66.83%), Query Frame = 0


Query: 156 QSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEK 215
           +  PPDL S L   RIVYLGM +VP+VTEL++A+F++L Y++  KPIYLYINS GT  + 
Sbjct: 100 EQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGT-TKN 159

Query: 216 MENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYL 275
            E +G++TEA+AI D+M Y KP ++T+  G A+G+AA+LL+ G KG R+  P+S+  +  
Sbjct: 160 GEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQ 219

Query: 276 PKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKDIQRPKYLNPQEAIDY 335
           P ++R  G   D+ I  +E+       ++L +K  GK  E+I  D++RPKY +P EA++Y
Sbjct: 220 P-IARFQGQATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEY 279

Query: 336 GLVDKIISSRDSAFEKRNYDDM 358
           G++DK++ +   + ++    D+
Sbjct: 280 GIIDKVVYNERGSQDRGVVSDL 299

[Close]

BLAST of Carg23034 vs. TAIR10
Match: AT5G45390.1 (CLP protease P4)

HSP 1 Score: 118.6 bits (296), Expect = 8.2e-27
Identity = 68/187 (36.36%), Postives = 108/187 (57.75%), Query Frame = 0


Query: 156 QSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEK 215
           + A  D+  LLL  RIV+LG  I   V + +++Q + LD  +P K I L+INSPG     
Sbjct: 74  RGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPG----- 133

Query: 216 MENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYL 275
               G  +   AI D++   + DV TI  G+A   A+++L  GTKG R   PN+   ++ 
Sbjct: 134 ----GSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQ 193

Query: 276 PKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKDIQRPKYLNPQEAIDY 335
           P +  +SG  ID+ I+A+E+  N +    ++A  T +  E++ KDI R +Y++P EA++Y
Sbjct: 194 P-LGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEY 250

Query: 336 GLVDKII 343
           GL+D +I
Sbjct: 254 GLIDGVI 250

[Close]

BLAST of Carg23034 vs. TAIR10
Match: AT5G23140.1 (nuclear-encoded CLP protease P7)

HSP 1 Score: 115.2 bits (287), Expect = 9.1e-26
Identity = 64/185 (34.59%), Postives = 103/185 (55.68%), Query Frame = 0


Query: 161 DLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVG 220
           D+ S LL  RI+ +  PI    + ++VAQ ++L+ +NPSKPI++Y+NSPG         G
Sbjct: 48  DIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPG---------G 107

Query: 221 FETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSR 280
             T   AI D M Y +  + TI  G A   A++LL+ G KG R   PN++  ++ P    
Sbjct: 108 HVTAGLAIYDTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPS-GG 167

Query: 281 SSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKDIQRPKYLNPQEAIDYGLVDK 340
            SG   D+ I  +++    D   EL  K TG+P + +A ++ R  ++ P+EA  +G++D+
Sbjct: 168 YSGQAKDITIHTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDE 222

Query: 341 IISSR 346
           +I  R
Sbjct: 228 VIDER 222

[Close]

BLAST of Carg23034 vs. Swiss-Prot
Match: sp|Q9XJ35|CLPR1_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR1 PE=1 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 1.3e-135
Identity = 254/360 (70.56%), Postives = 295/360 (81.94%), Query Frame = 0


Query: 23  SFLFGTHLPFPSSRPRTSYRRYFLSPSAKKSMDHIPKQFREENLKDGLMENYENVPQSLY 82
           S LF +++P  S+ PR + R +  + +   S DHIPKQFR +NLKDG+M+N++NVPQ  Y
Sbjct: 33  SKLFSSNMPC-STVPRRTRRSHCFASAKDMSFDHIPKQFRGDNLKDGVMQNFKNVPQYFY 92

Query: 83  GLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTNGGMWSLSGMDGKKGPSKYSMSA 142
           GL  +Q+DMFMTED+PVRRQ+E VTEESISS ++YL NGG+WS+SGM+      +YSMS 
Sbjct: 93  GLNSAQMDMFMTEDSPVRRQAEKVTEESISSRNNYLNNGGIWSMSGMNAADA-RRYSMSV 152

Query: 143 SMYRGGGRGYGRR--QSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLDYDNPSK 202
            MYR           ++APPDLPSLLLDARI YLGMPIVPAVTELLVAQFMWLDYDNP+K
Sbjct: 153 QMYRXXXXXXXXXXPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTK 212

Query: 203 PIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTK 262
           PIYLYINSPGTQNEKME VG ETEAYAIAD ++YCK DVYTINCGMAFGQAAMLLSLG K
Sbjct: 213 PIYLYINSPGTQNEKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKK 272

Query: 263 GYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKD 322
           GYRAVQP+SS KLYLPKV+RSSGA IDMWIKA+ELDANT+YYIELLAKGTGK  E+I +D
Sbjct: 273 GYRAVQPHSSTKLYLPKVNRSSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINED 332

Query: 323 IQRPKYLNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQSRAMRKGAGGNPQAAPSGLR 381
           I+RPKYL  Q AIDYG+ DKI  S+DS+FEKR+YD  LAQ RAMR G GG+P AAP+GLR
Sbjct: 333 IKRPKYLQAQAAIDYGIADKIADSQDSSFEKRDYDGTLAQ-RAMRPG-GGSP-AAPAGLR 387

[Close]

BLAST of Carg23034 vs. Swiss-Prot
Match: sp|Q8L770|CLPR3_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR3 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.1e-44
Identity = 94/210 (44.76%), Postives = 139/210 (66.19%), Query Frame = 0


Query: 135 PSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLD 194
           P   S  A + R       R ++ PPDLPS+LLD RIVY+GMP+VPAVTEL+VA+ M+L 
Sbjct: 95  PQLMSSPAQVERSVAYNEHRPRTPPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQ 154

Query: 195 YDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAML 254
           + +P +PIY+YINS GT  +  E VG E+E +AI D +   K +V+T+  G A GQA +L
Sbjct: 155 WLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLL 214

Query: 255 LSLGTKGYRAVQPNSSAKLYLPKVSRSSGAV--IDMWIKARELDANTDYYIELLAKGTGK 314
           LS GTKG R + P++ A +  P+V  SSG +   D+ I+A+E+  N D  +ELL+K TG 
Sbjct: 215 LSAGTKGKRFMMPHAKAMIQQPRVP-SSGLMPASDVLIRAKEVITNRDILVELLSKHTGN 274

Query: 315 PAEEIAKDIQRPKYLNPQEAIDYGLVDKII 343
             E +A  ++RP Y++  +A ++G++D+I+
Sbjct: 275 SVETVANVMRRPYYMDAPKAKEFGVIDRIL 303

[Close]

BLAST of Carg23034 vs. Swiss-Prot
Match: sp|Q9L4P4|CLPR_SYNE7 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus elongatus (strain PCC 7942) OX=1140 GN=clpR PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.2e-43
Identity = 90/200 (45.00%), Postives = 131/200 (65.50%), Query Frame = 0


Query: 156 QSAPPDLPSLLLDARIVYLGMPIVPA----------VTELLVAQFMWLDYDNPSKPIYLY 215
           ++ PPDLPSLLL  RI+YLGMP+  +          VTEL++AQ ++L++DNP KPIY Y
Sbjct: 19  RTPPPDLPSLLLKERIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDNPEKPIYFY 78

Query: 216 INSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTKGYRAV 275
           INS GT     + +G+ETEA+AI D M Y KP V+TI  G A G AAM+LS GT G RA 
Sbjct: 79  INSTGTSWYTGDAIGYETEAFAICDTMRYIKPPVHTICIGQAMGTAAMILSGGTPGNRAS 138

Query: 276 QPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKDIQRPK 335
            P+++  L  P+   + G   D+ I+A+E+ AN    +E+ A+ TG+  + +A+D  R  
Sbjct: 139 LPHATIVLNQPRTG-AQGQASDIQIRAKEVLANKRTMLEIFARNTGQDPDRLARDTDRML 198

Query: 336 YLNPQEAIDYGLVDKIISSR 346
           Y+ P +A++YGL+D+++ SR
Sbjct: 199 YMTPAQAVEYGLIDRVLDSR 217

[Close]

BLAST of Carg23034 vs. Swiss-Prot
Match: sp|Q8LB10|CLPR4_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR4 PE=1 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.7e-42
Identity = 85/202 (42.08%), Postives = 135/202 (66.83%), Query Frame = 0


Query: 156 QSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEK 215
           +  PPDL S L   RIVYLGM +VP+VTEL++A+F++L Y++  KPIYLYINS GT  + 
Sbjct: 100 EQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGT-TKN 159

Query: 216 MENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYL 275
            E +G++TEA+AI D+M Y KP ++T+  G A+G+AA+LL+ G KG R+  P+S+  +  
Sbjct: 160 GEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQ 219

Query: 276 PKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKDIQRPKYLNPQEAIDY 335
           P ++R  G   D+ I  +E+       ++L +K  GK  E+I  D++RPKY +P EA++Y
Sbjct: 220 P-IARFQGQATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEY 279

Query: 336 GLVDKIISSRDSAFEKRNYDDM 358
           G++DK++ +   + ++    D+
Sbjct: 280 GIIDKVVYNERGSQDRGVVSDL 299

[Close]

BLAST of Carg23034 vs. Swiss-Prot
Match: sp|P74466|CLPR_SYNY3 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=clpR PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.3e-42
Identity = 91/199 (45.73%), Postives = 130/199 (65.33%), Query Frame = 0


Query: 156 QSAPPDLPSLLLDARIVYLGMPIVPA----------VTELLVAQFMWLDYDNPSKPIYLY 215
           ++ PPDL SLLL  RIVYLGMP+  +          VT+L++AQ ++L +D+P KPIY Y
Sbjct: 17  KTPPPDLESLLLKERIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDDPDKPIYFY 76

Query: 216 INSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTKGYRAV 275
           INS GT     + VGFETEA+AI D + Y KP V+TI  G A G AAM+LS GTKGYRA 
Sbjct: 77  INSTGTSWYTGDAVGFETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSSGTKGYRAS 136

Query: 276 QPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKDIQRPK 335
            P+++  L   +   + G   D+ I+A+E+ +N    +E+L+  TG+  E++AKD+ R  
Sbjct: 137 LPHATIVLNQNRTG-AQGQATDIQIRAKEVISNKQTMLEILSLNTGQTQEKLAKDMDRTF 196

Query: 336 YLNPQEAIDYGLVDKIISS 345
           YL P +A +YGL+D+++ S
Sbjct: 197 YLTPAQAKEYGLIDRVLES 214

[Close]

BLAST of Carg23034 vs. TrEMBL
Match: tr|A0A1S3BZX8|A0A1S3BZX8_CUCME (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103495302 PE=3 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 8.3e-175
Identity = 311/380 (81.84%), Postives = 344/380 (90.53%), Query Frame = 0


Query: 1   MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFLSPSAKKSMDHIPKQ 60
           MATSS  H+SA PSLA+ SSKSSFL GT LP PSSR RTS RRY LSPSA++SMDHIPKQ
Sbjct: 1   MATSSLFHLSAPPSLAIDSSKSSFLCGTQLPLPSSRLRTSCRRYVLSPSAQQSMDHIPKQ 60

Query: 61  FREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTN 120
           FR ENLKDGL+ENY+N P+ LYGLTPSQ+DMFMTEDNPVRRQSELVTE++ISS+++YL +
Sbjct: 61  FRGENLKDGLIENYKNAPKYLYGLTPSQMDMFMTEDNPVRRQSELVTEQNISSSYNYLNH 120

Query: 121 GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP 180
           GGMWSL+GMDG KGP+KYSMS SMYRGGGR  GR ++APPDLPSLLLDARIVYLGMPIVP
Sbjct: 121 GGMWSLTGMDG-KGPAKYSMSVSMYRGGGRAAGRPRNAPPDLPSLLLDARIVYLGMPIVP 180

Query: 181 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY 240
           AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKME VG ETEAYA+ DMM+YCK DVY
Sbjct: 181 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMETVGSETEAYALGDMMSYCKSDVY 240

Query: 241 TINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTD 300
           T+N GMAFGQAAMLLSLGTKGYRA+QPNSS KLYLPKV+RSSG VIDMWIKA+ELDANT+
Sbjct: 241 TVNVGMAFGQAAMLLSLGTKGYRALQPNSSTKLYLPKVNRSSGTVIDMWIKAKELDANTE 300

Query: 301 YYIELLAKGTGKPAEEIAKDIQRPKYLNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ 360
           YY+ELLAKG GKP EEI KDIQR KY   QEAIDYG+ DKII+S+DSAFEKRNYD+MLAQ
Sbjct: 301 YYLELLAKGIGKPKEEITKDIQRSKYFQAQEAIDYGIADKIITSQDSAFEKRNYDEMLAQ 360

Query: 361 SRAMRKGAGGNPQAAPSGLR 381
           S+A R+GAGGNPQAAP+G R
Sbjct: 361 SKAARRGAGGNPQAAPTGFR 379

[Close]

BLAST of Carg23034 vs. TrEMBL
Match: tr|A0A2P5EYE6|A0A2P5EYE6_9ROSA (ATP-dependent Clp protease proteolytic subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_136130 PE=3 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 2.1e-162
Identity = 300/387 (77.52%), Postives = 336/387 (86.82%), Query Frame = 0


Query: 1   MATSSPLHISATPSLA--VGSSKSSFLFGTHL-----PFPSSRPRTSYRRYFLSPSAKKS 60
           MA+S    +S  PS A  +G +KSSF+ GT L      + +S  R + RR F+S S+ KS
Sbjct: 1   MASSLISSLSTPPSSARHLGLTKSSFVHGTKLSYSPSSYKASSERATARRCFVSASS-KS 60

Query: 61  MDHIPKQFREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISS 120
           +DHIPK+FR ENLKDGLM+N++N PQ LYGL+PSQ+DMFMTEDNPVRRQSE VTE+SISS
Sbjct: 61  LDHIPKEFRGENLKDGLMDNFKNAPQYLYGLSPSQMDMFMTEDNPVRRQSEAVTEDSISS 120

Query: 121 AHSYLTNGGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVY 180
           +H+YL +GGMWSLSG+   KGPSKYSMS SMYRGG RGYGR ++APPDLPSLLLDARI Y
Sbjct: 121 SHNYLNHGGMWSLSGLH-DKGPSKYSMSVSMYRGGARGYGRPRTAPPDLPSLLLDARICY 180

Query: 181 LGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMA 240
           LGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKME VG ETEAYAIADMM+
Sbjct: 181 LGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMETVGSETEAYAIADMMS 240

Query: 241 YCKPDVYTINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKAR 300
           Y K DVYT+NCGMA+GQAAML+SLGTKGYRAVQPNSS KLYLPKV+RSSGAVIDMWIKA+
Sbjct: 241 YVKSDVYTVNCGMAYGQAAMLVSLGTKGYRAVQPNSSTKLYLPKVNRSSGAVIDMWIKAK 300

Query: 301 ELDANTDYYIELLAKGTGKPAEEIAKDIQRPKYLNPQEAIDYGLVDKIISSRDSAFEKRN 360
           ELDANT+YYIELLAKGTGK  EEIAKD+QRPKYL  QEAIDYG+ DKII+SRD AFEKRN
Sbjct: 301 ELDANTEYYIELLAKGTGKTKEEIAKDVQRPKYLQAQEAIDYGVADKIINSRDIAFEKRN 360

Query: 361 YDDMLAQSRAMRKGAGGNPQAAPSGLR 381
           YD+MLAQSRA R+ AGGNPQAAPSGLR
Sbjct: 361 YDEMLAQSRATRRAAGGNPQAAPSGLR 385

[Close]

BLAST of Carg23034 vs. TrEMBL
Match: tr|A0A2P5DNE5|A0A2P5DNE5_PARAD (ATP-dependent Clp protease proteolytic subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_048600 PE=3 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 5.3e-161
Identity = 297/387 (76.74%), Postives = 334/387 (86.30%), Query Frame = 0


Query: 1   MATSSPLHISATPSLA--VGSSKSSFLFGTHLPFPSSRPRTSY-----RRYFLSPSAKKS 60
           MA+S    +S  PS A  +G +KSSF+ GT L +  S  + S      RR F+  S+ KS
Sbjct: 1   MASSLTSSLSTPPSSARHLGPTKSSFVHGTKLSYSPSSYKASLEKATARRCFVFASS-KS 60

Query: 61  MDHIPKQFREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISS 120
           +DHIPK+FR ENLKDGLM+N++N PQ LYGL+PSQ+DMFMTEDNPVRRQSE VTE+SISS
Sbjct: 61  LDHIPKEFRGENLKDGLMDNFKNAPQYLYGLSPSQMDMFMTEDNPVRRQSEAVTEDSISS 120

Query: 121 AHSYLTNGGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVY 180
           +H+YL +GGMWSLSG+   KGPSKYSMS +MYRGG RGYGR ++APPDLPSLLLDARI Y
Sbjct: 121 SHNYLNHGGMWSLSGLH-DKGPSKYSMSVNMYRGGARGYGRPRTAPPDLPSLLLDARICY 180

Query: 181 LGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMA 240
           LGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKME VG ETEAYAIADMM+
Sbjct: 181 LGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMETVGSETEAYAIADMMS 240

Query: 241 YCKPDVYTINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKAR 300
           Y K DVYT+NCGMA+GQAAML+SLGTKGYRAVQPNSS KLYLPKV++SSGAVIDMWIKA+
Sbjct: 241 YVKSDVYTVNCGMAYGQAAMLVSLGTKGYRAVQPNSSTKLYLPKVNKSSGAVIDMWIKAK 300

Query: 301 ELDANTDYYIELLAKGTGKPAEEIAKDIQRPKYLNPQEAIDYGLVDKIISSRDSAFEKRN 360
           ELDANT+YYIELLAKGTGK  EEIAKD+QRPKYL  QEAIDYG+ DKII+SRD AFEKRN
Sbjct: 301 ELDANTEYYIELLAKGTGKTKEEIAKDVQRPKYLQAQEAIDYGVADKIINSRDIAFEKRN 360

Query: 361 YDDMLAQSRAMRKGAGGNPQAAPSGLR 381
           YD+MLAQSRA R+ AGGNPQAAPSGLR
Sbjct: 361 YDEMLAQSRATRRAAGGNPQAAPSGLR 385

[Close]

BLAST of Carg23034 vs. TrEMBL
Match: tr|A0A0A0K4G3|A0A0A0K4G3_CUCSA (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa_7G071430 PE=3 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 2.0e-160
Identity = 291/380 (76.58%), Postives = 329/380 (86.58%), Query Frame = 0


Query: 1   MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFLSPSAKKSMDHIPKQ 60
           MATSS  H+SA PSL++GSSKSSFLFGT LP P S  R S RRY LSP A++SMDHIPKQ
Sbjct: 1   MATSSLFHLSAPPSLSIGSSKSSFLFGTQLPLPPSCSRISRRRYVLSPHAQQSMDHIPKQ 60

Query: 61  FREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTN 120
           FREENLKDGL+ENY+NVPQ LYGLTPSQ+DMFMTEDNPV+RQSELV EE ISSA++YL +
Sbjct: 61  FREENLKDGLIENYKNVPQYLYGLTPSQMDMFMTEDNPVQRQSELVNEEKISSAYNYLNH 120

Query: 121 GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP 180
           GGMWSL+GMDG KGP KYSMS +MYRGGG   GR +S+PPDLP+LLLDARI+YLGMPIVP
Sbjct: 121 GGMWSLTGMDG-KGPDKYSMSVNMYRGGGG--GRPRSSPPDLPTLLLDARIIYLGMPIVP 180

Query: 181 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY 240
           AVTEL+VAQFMWLDYDNP+KPIYLYINS GTQ+E  E VG ETEAYAIADMM+YCK DVY
Sbjct: 181 AVTELIVAQFMWLDYDNPTKPIYLYINSSGTQDENRELVGSETEAYAIADMMSYCKSDVY 240

Query: 241 TINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTD 300
           TIN  MA+GQAAMLLSLGTKGYRA+QPN+S KLYLPKV+ SSG+ IDMWIKA+ELDANT+
Sbjct: 241 TINLAMAYGQAAMLLSLGTKGYRALQPNASTKLYLPKVNNSSGSAIDMWIKAKELDANTE 300

Query: 301 YYIELLAKGTGKPAEEIAKDIQRPKYLNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ 360
           YY+ELLAKG GKP EEI KDIQ  KY  PQEAIDYG+ DKII   D A+EK+NYD+ML+Q
Sbjct: 301 YYLELLAKGIGKPKEEINKDIQLSKYFKPQEAIDYGIADKIIKPEDPAYEKKNYDEMLSQ 360

Query: 361 SRA--MRKGAGGNPQAAPSG 379
           S+A   R+G G NPQAAP+G
Sbjct: 361 SKAANARRGRGVNPQAAPTG 377

[Close]

BLAST of Carg23034 vs. TrEMBL
Match: tr|A0A061E852|A0A061E852_THECC (ATP-dependent Clp protease proteolytic subunit OS=Theobroma cacao OX=3641 GN=TCM_007216 PE=3 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 5.8e-160
Identity = 300/385 (77.92%), Postives = 328/385 (85.19%), Query Frame = 0


Query: 1   MATSSPLHISATPSLAVGS----SKSSFLFGTHLPFPSSRPR-TSYRRYFLSPSAKKSMD 60
           MATS    ++A    AVG     SKS FL GT L F    PR  +  R + +P A KS+D
Sbjct: 1   MATSLLSPLTAPNPEAVGPNIRLSKSCFLSGTKLFFLKPHPRKPTAHRCYTTPFA-KSLD 60

Query: 61  HIPKQFREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAH 120
           HIPKQFR+ENLKDGLM+N++NVPQ LYGL+PSQ+DMFMTEDNPVRRQSE VTEESISSA 
Sbjct: 61  HIPKQFRQENLKDGLMDNFKNVPQYLYGLSPSQMDMFMTEDNPVRRQSERVTEESISSAR 120

Query: 121 SYLTNGGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLG 180
           +YL NGGMWS+SG    +GPSKYSMS SMYRGG RGYGR ++APPDLPSLLLDARI YLG
Sbjct: 121 NYLDNGGMWSMSG-SNDRGPSKYSMSVSMYRGGARGYGRPRTAPPDLPSLLLDARICYLG 180

Query: 181 MPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYC 240
           MPIVPAVTELLVAQFMWLDYDNPSKPIYLYINS GTQNEKME VG ETEAYAIAD MAYC
Sbjct: 181 MPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSSGTQNEKMETVGSETEAYAIADTMAYC 240

Query: 241 KPDVYTINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKAREL 300
           K DVYT+NCGMA+GQAAMLLSLG KG+RAVQPNSS KLYLPKV+RSSGAVIDMWIKA+EL
Sbjct: 241 KADVYTVNCGMAYGQAAMLLSLGAKGFRAVQPNSSTKLYLPKVNRSSGAVIDMWIKAKEL 300

Query: 301 DANTDYYIELLAKGTGKPAEEIAKDIQRPKYLNPQEAIDYGLVDKIISSRDSAFEKRNYD 360
           DANT+YYIELLAKGTGK  EEIAKD+QRPKY   QEAIDYGLVDKII SRD+AFEKRNYD
Sbjct: 301 DANTEYYIELLAKGTGKTEEEIAKDVQRPKYFQAQEAIDYGLVDKIIDSRDAAFEKRNYD 360

Query: 361 DMLAQSRAMRKGAGGNPQAAPSGLR 381
           +MLAQS+AMR+GAG  PQAAPSG R
Sbjct: 361 EMLAQSKAMRRGAGFGPQAAPSGFR 383

The following BLAST results are available for this feature:

BLAST of Carg23034 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927727.1	1.8e-213	99.47	ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ...	[more]
XP_023531549.1	1.2e-212	98.95	ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ...	[more]
XP_022988818.1	1.7e-211	98.16	ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ...	[more]
XP_022148841.1	4.6e-177	83.73	ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ...	[more]
XP_008455029.1	1.3e-174	81.84	PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 1, chl...	[more]

BLAST of Carg23034 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G49970.1	7.4e-137	70.56	CLP protease proteolytic subunit 1	[more]
AT1G09130.3	2.3e-45	44.76	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT4G17040.1	9.7e-44	42.08	CLP protease R subunit 4	[more]
AT5G45390.1	8.2e-27	36.36	CLP protease P4	[more]
AT5G23140.1	9.1e-26	34.59	nuclear-encoded CLP protease P7	[more]

BLAST of Carg23034 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9XJ35\|CLPR1_ARATH	1.3e-135	70.56	ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ...	[more]
sp\|Q8L770\|CLPR3_ARATH	4.1e-44	44.76	ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ...	[more]
sp\|Q9L4P4\|CLPR_SYNE7	1.2e-43	45.00	Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus el...	[more]
sp\|Q8LB10\|CLPR4_ARATH	1.7e-42	42.08	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]
sp\|P74466\|CLPR_SYNY3	2.3e-42	45.73	Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp...	[more]

BLAST of Carg23034 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BZX8\|A0A1S3BZX8_CUCME	8.3e-175	81.84	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A2P5EYE6\|A0A2P5EYE6_9ROSA	2.1e-162	77.52	ATP-dependent Clp protease proteolytic subunit OS=Trema orientalis OX=63057 GN=T...	[more]
tr\|A0A2P5DNE5\|A0A2P5DNE5_PARAD	5.3e-161	76.74	ATP-dependent Clp protease proteolytic subunit OS=Parasponia andersonii OX=3476 ...	[more]
tr\|A0A0A0K4G3\|A0A0A0K4G3_CUCSA	2.0e-160	76.58	ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa...	[more]
tr\|A0A061E852\|A0A061E852_THECC	5.8e-160	77.92	ATP-dependent Clp protease proteolytic subunit OS=Theobroma cacao OX=3641 GN=TCM...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Molecular Function**
Term	Definition
GO:0004252	serine-type endopeptidase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR029045	ClpP/crotonase-like_dom_sf
IPR023562	ClpP/TepA
IPR001907	ClpP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004252	serine-type endopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23034-RA	Carg23034-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 161..176 score: 40.62 coord: 241..258 score: 40.56 coord: 201..221 score: 35.24 coord: 320..339 score: 41.62
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 161..341 e-value: 3.38183E-74 score: 229.636
None	No IPR available	GENE3D	G3DSA:3.90.226.10		coord: 151..349 e-value: 8.0E-52 score: 177.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 360..380
None	No IPR available	PANTHER	PTHR10381:SF18	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 1, CHLOROPLASTIC	coord: 50..373
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 161..344 e-value: 1.2E-39 score: 136.0
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 50..373
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	SSF52096	ClpP/crotonase	coord: 155..346

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23034	Cla016089	Watermelon (97103) v1	carwmB0733
Carg23034	Csa7G071430	Cucumber (Chinese Long) v2	carcuB0751
Carg23034	MELO3C018514	Melon (DHL92) v3.5.1	carmeB0726
Carg23034	ClCG02G006760	Watermelon (Charleston Gray)	carwcgB0711
Carg23034	CSPI07G06900	Wild cucumber (PI 183967)	carcpiB0767
Carg23034	Cucsa.219200	Cucumber (Gy14) v1	carcgyB0825
Carg23034	CmaCh11G017020	Cucurbita maxima (Rimu)	carcmaB1025
Carg23034	CmoCh11G014160	Cucurbita moschata (Rifu)	carcmoB0997
Carg23034	Lsi03G005720	Bottle gourd (USVL1VR-Ls)	carlsiB672
Carg23034	Cp4.1LG04g07570	Cucurbita pepo (Zucchini)	carcpeB1033
Carg23034	CsGy7G006440	Cucumber (Gy14) v2	carcgybB0729
Carg23034	MELO3C018514.2	Melon (DHL92) v3.6.1	carmedB0737
Carg23034	CsaV3_7G007880	Cucumber (Chinese Long) v3	carcucB0770
Carg23034	Cla97C02G033760	Watermelon (97103) v2	carwmbB0766
Carg23034	Bhi05G000894	Wax gourd	carwgoB0866

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23034	Silver-seed gourd	carcarB456
Carg23034	Cucurbita maxima (Rimu)	carcmaB1026
Carg23034	Cucurbita moschata (Rifu)	carcmoB0998
Carg23034	Cucurbita pepo (Zucchini)	carcpeB1031