Cp4.1LG04g07350 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGTTTGCAAGTTAGTTTGAAAAAGAATTAAATTCAAGCCACTTCTGTTCGGTTGCGTCCTCGCTCCTGCTGACGAAGAATATTGAGCTATTATCTTTTCGACAAGATTGTTGGAGAAACCGTTCCACCAATTTCGCTTCCTGTGATCGATATTTACACACAAGAGCCTTCTTTGATATGGCAACAATGTGGAGGGGTCAATGACAAAGAAATCTACTTCTTCACCAACTCCAATAAGAAGAAATCTGGTGTTATAGAAAAACAATGTGGAAGGATTGATGACAAAGAAATCTACCCCTTCACCAACTTCAATAAGAAGAAATATGGTATTATTAGAAAAGTTGTCTCTGGTGACACTTGAACCGGTGAAAATAAAGGTCAACAAGTATTTAATGTCCTAATTGCTAGCATCAAACGGTTTCATTACGAGACTACTAAATACAAAGCTAATGACAATGATTGTTCTTGGATCATGTGGGAGAACACAAGTGATCATACTTTCAGACCTAAAGAATTCATGCATGATTCCTACGTACTCTACATGATTCGAAGGAGGATGTTAAAAAACGTAAAAAATGCAGTCTCGATAAGAATACAAAAATCATTTGCCTCAAATTGCCTAACCAACAACAACCACTACAACAATGCATGTATGATCAAAATTCTGAACTACAACAAATCACTCCGAACATGAATGTTAAGTATCATTTCTTATCTAATGGTATATTTTTATTTTATAATTGGCTTTAAAAACTAATTTAATTGTGTTGAAATGAATTTATTTATTTTTTAACCATGTTCATAAATATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTGCACAGTAGTCCAGTCCACATGCCTAAATATTGGAATCACATCATCAATTTTCAAAGGATGA ATGATAATATTGAGCTATTATCTTTTCGACAAGATTGTTGGAGAAACCGTTCCACCAATTTCGCTTCCTGTGATCGATATTTACACACAAGAGCCTTCTTTGATATGGCAACAATGTGGAGGGGTCAATGACAAAGAAATCTACTTCTTCACCAACTCCAATAAGAAGAAATCTGGTGTTATAGAAAAACAATGTGGAAGGATTGATGACAAAGAAATCTACCCCTTCACCAACTTCAATAAGAAGAAATATGAAAAGTTGTCTCTGGTGACACTTGAACCGGTGAAAATAAAGGTCAACAACATCAAACGGTTTCATTACGAGACTACTAAATACAAAGCTAATGACAATGATTGTTCTTGGATCATGTGGGAGAACACAAGTGATCATACTTTCAGACCTAAAGAATTCATGCATGATTCCTACGTACTCTACATGATTCGAAGGAGGATGTTAAAAAACGTAAAAAATGCAGTCTCGATAAGAATACAAAAATCATTTGCCTCAAATTGCCTAACCAACAACAACCACTACAACAATGCATTAGTCCAGTCCACATGCCTAAATATTGGAATCACATCATCAATTTTCAAAGGATGA ATGATAATATTGAGCTATTATCTTTTCGACAAGATTGTTGGAGAAACCGTTCCACCAATTTCGCTTCCTGTGATCGATATTTACACACAAGAGCCTTCTTTGATATGGCAACAATGTGGAGGGGTCAATGACAAAGAAATCTACTTCTTCACCAACTCCAATAAGAAGAAATCTGGTGTTATAGAAAAACAATGTGGAAGGATTGATGACAAAGAAATCTACCCCTTCACCAACTTCAATAAGAAGAAATATGAAAAGTTGTCTCTGGTGACACTTGAACCGGTGAAAATAAAGGTCAACAACATCAAACGGTTTCATTACGAGACTACTAAATACAAAGCTAATGACAATGATTGTTCTTGGATCATGTGGGAGAACACAAGTGATCATACTTTCAGACCTAAAGAATTCATGCATGATTCCTACGTACTCTACATGATTCGAAGGAGGATGTTAAAAAACGTAAAAAATGCAGTCTCGATAAGAATACAAAAATCATTTGCCTCAAATTGCCTAACCAACAACAACCACTACAACAATGCATTAGTCCAGTCCACATGCCTAAATATTGGAATCACATCATCAATTTTCAAAGGATGA MIILSYYLFDKIVGETVPPISLPVIDIYTQEPSLIWQQCGGVNDKEIYFFTNSNKKKSGVIEKQCGRIDDKEIYPFTNFNKKKYEKLSLVTLEPVKIKVNNIKRFHYETTKYKANDNDCSWIMWENTSDHTFRPKEFMHDSYVLYMIRRRMLKNVKNAVSIRIQKSFASNCLTNNNHYNNALVQSTCLNIGITSSIFKG
BLAST of Cp4.1LG04g07350 vs. TrEMBL
Match: A0A0A0LWA5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G224380 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 4.2e-23 Identity = 71/173 (41.04%), Postives = 98/173 (56.65%), Query Frame = 1
BLAST of Cp4.1LG04g07350 vs. TrEMBL
Match: A0A0A0L807_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110040 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.8e-19 Identity = 68/168 (40.48%), Postives = 94/168 (55.95%), Query Frame = 1
BLAST of Cp4.1LG04g07350 vs. NCBI nr
Match: gi|659085728|ref|XP_008443570.1| (PREDICTED: NAC domain-containing protein 55-like [Cucumis melo]) HSP 1 Score: 126.7 bits (317), Expect = 4.5e-26 Identity = 71/182 (39.01%), Postives = 109/182 (59.89%), Query Frame = 1
BLAST of Cp4.1LG04g07350 vs. NCBI nr
Match: gi|778664815|ref|XP_011660358.1| (PREDICTED: uncharacterized protein LOC105436381 [Cucumis sativus]) HSP 1 Score: 123.2 bits (308), Expect = 5.0e-25 Identity = 69/178 (38.76%), Postives = 108/178 (60.67%), Query Frame = 1
BLAST of Cp4.1LG04g07350 vs. NCBI nr
Match: gi|700210011|gb|KGN65107.1| (hypothetical protein Csa_1G224380 [Cucumis sativus]) HSP 1 Score: 116.3 bits (290), Expect = 6.1e-23 Identity = 71/173 (41.04%), Postives = 98/173 (56.65%), Query Frame = 1
BLAST of Cp4.1LG04g07350 vs. NCBI nr
Match: gi|700201123|gb|KGN56256.1| (hypothetical protein Csa_3G110040 [Cucumis sativus]) HSP 1 Score: 103.6 bits (257), Expect = 4.1e-19 Identity = 68/168 (40.48%), Postives = 94/168 (55.95%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |