Cp4.1LG04g07310 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g07310
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG04 : 4184697 .. 4188594 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAGGGGTATAATCATTTTGTTTTACATAATGTTGTCGTGGCTATTACTAGTTCTAACGGGTGTCTGGCCTAAGAAGCTCCCAGAGTATGCTCGCCCGATAAGGAAAGTGGCCCAACGGTGTGCGAACTGACTGGTGAGTCCATACTCGCACGTATGGGTTGTGTGTAGAGTATATGGTACACATCCAAGTTACCCGTTAGGACAGTACCGTAGGTAAATAGATTGAAATGATAGGTCCCGTTATTGCATTTGTATGTTCTTGCATTTAACCTCCAATAGTGGGGTCACTTGATATTTCTTTAAATACTCAAGTCATGTGCTACTACATTTTTCAAGGCAAAGCATTCATGTACTGCTGACGACGGCATAGCAATTTGAGACCATGACACATGCATAGGGCAGTGGTATTTAGTTTCTTAGACTTAGGAATAAGATGATTTTAATTTAAATGTTTATTTATTTTATTTAGCCTTTTGTTGTGTCGTCTTAAAGGTGTTTTCGAATCACGTAAGTCCATGGCTGTGTTTTAAGACAAAGGTTACGTTTTATGGAATTTAAATGAAGTTTTTTCGCATTCAATGTTCATGATATGTATACAGTAATGACCTTAAATTAAGTAGAAAATTTTGGGTCTACCGTTGATATTAGAGCTCTAGGTTACAAATCTTATAGACTAGCCTACAATGTAGGCTTGGCATGTTCCATGGTCCCACCGTCGATGCCCCGTCTCCATCAGGTATGTCTTGCATAAGATAGTAAAATGAAATGACATTGATTGCGTATGTTGTTATTGTTTGGTCATTATAAAATATAACTCATAATTGAATTTTTTTTTTTTTTTACATCATTGACTGTATCATAATTGACTGCGTTATTGTTAGTTTAATTTTATTTTTATTATAATGTAGAATGTTACGTTTTACCTTGTATGAGATGTGAATGTAAATTGTTGTATTGATGATANGACACATGCATAGGGCAGTGGTATTTAGTTTCTTAGACTTAGGAATAAGATGATTTTAATTTAAATGTTTATTTATTTTATTTAGCCTTTTGTTGTGTCGTCTTAAAGGTGTTTTCGAATCACGTAAGTCCATGGCTGTGTTTTAAGACAAAGGTTACGTTTTATGGAATTTAAATGAAGTTTTTTCGCATTCAATGTTCATGATATGTATACAGTAATGACCTTAAATTAAGTAGAAAATTTTGGGTCTACCGTTGATATTAGAGCTCTAGGTTACAAATCTTATAGACTAGCCTACAATGTAGGCTTGGCATGTTCCATGGTCCCACCGTCGATGCCCCGTCTCCATCAGGTATGTCTTGCATAAGATAGTAAAATGAAATGACATTGATTGCGTATGTTGTTATTGTTTGGTCATTATAAAATATAACTCATAATTGAATTTTTTTTTTTTTTTACATCATTGACTGTATCATAATTGACTGCGTTATTGTTAGTTTAATTTTATTTTTATTATAATGTAGAATGTTACGTTTTACCTTGTATGAGATGTGAATGTAAATTGTTGTATTGATGATATTTAGACTTACTGATGTTGGTACTGTGAATGGGTAGCTAGAGTTTTAGTAAGCTACTAAATGTTAGTGTACGCGTGAAAATGNTCTTAAAGGTGTTTTCGAATCACGTAAGTCCATGGCTGTGTTTTAAGACAAAGGTTACGTTTTATGGAATTTAAATGAAGTTTTTTCGCATTCAATGTTCATGATATGTATACAGTAATGACCTTAAATTAAGTAGAAAATTTTGGGTCTACCGTTGATATTAGAGCTCTAGGTTACAAATCTTATAGACTAGCCTACAATGTAGGCTTGGCATGTTCCATGGTCCCACCGTCGATGCCCCGTCTCCATCAGGTATGTCTTGCATAAGATAGTAAAATGAAATGACATTGATTGCGTATGTTGTTATTGTTTGGTCATTATAAAATATAACTCATAATTGAATTTTTTTTTTTTTTTACATCATTGACTGTATCATAATTGACTGCGTTATTGTTAGTTTAATTTTATTTTTATTATAATGTAGAATGTTACGTTTTACCTTGTATGAGATGTGAATGTAAATTGTTGTATTGATGATATTTAGACTTACTGATGTTGGTACTGTGAATGGGTAGCTAGAGTTTTAGTAAGCTACTAAATGTTAGTGTACGCGTGAAAATGATTTTGCTAAGGAATGTCATATGCTTCAGTTAGACGTCTCGAACATAGATAAATTACTTAGTGTTATGATCGTAGAGATGAAAAGGAATGTACCAACGTATATTGACGTCTAAGTAATTTCAAATGAAATGAAAATGACCTAAGAAGCTTGATAAATGATAATATCTTATAGTATGCTATAGATACTAAACAGGTAGTATCTTGAAATAAAATTTTGTAAGGTAAATATTATTAAAGTACGAAGAGAAAAAAAGAAGGTGATGCTTTACCACTCGAAAAAAAGAAAGAAAAAAATTAATACCATACAAATTTAAAATGTGTATGGGTGAATGACATAGGTGCCTTTGAAGCTGAGCTTTGGAAGGAGTGAGATGTAGAAAGCTTTCCCACCTTAATACGAGTTGAAATTAAAAAAAAAATAATAATACAACGGCAATTAGGAAGTTATAGGAAGTTATGGGGCGATTTAAAATTATCGAGGCAAACCTTGGATAAAGCATTACGATCATGGTCAAAATTTTAAAAGTATATGGAGAGGGACTAACTTATGATAAGATTGTCAATATATCTTAAGAAAATATAGATTTAAGATAGACTTGGGTTGGGATACACTCGAATGACAGAGGGGAGACATTGTCTCTAAATCAACTAAAAATGTGGTGTAATTTTTCTTATGCTCATTACAAAATGCTCAACGTAAACCAATGGTTATATAAAGAAGTATCAATTGTTATATAAAAACCTCAACCATATTATCATAGTTATTTTTTAACTTGATTTTTGTTAAGTATCCAAGTTTTATGGCATCTATAATCTCTGGCTTGTAATATCAATTTTTAGATTAGAATTTTGTTATCCATATTAGTGATGTTTTATAGGACAATGGTTACAAATGAGATGGTGAGCAAGGAGGTCAATTATTAAACCTTTACCAAAATTGAGAGAATTTGACTGTAGAACAATGTAACGTCCGAATGTAACCTATACACACAAGAGCCTTCTCTAATATGCAACAATGTGGAGGTATCGATGACAAAGAAANTGTCTTGCATAAGATAGTAAAATGAAATGACATTGATTGCGTATGTTGTTATTGTTTGGTCATTATAAAATATAACTCATAATTGAATTTTTTTTTTTTTTTTCTCTAATATGCAACAATGTGGAGGTATCGATGACAAAGAAATCTACTTCTTCACTAACTTCAATAAGAAGAAATCTTGTGTTATTAGAAAAGTTGGCTATAATGGTGCCACTTGGAGGGGTGAAAACAAAGGTCAACAAGTATTCTCTTCTATTAGTAATGTCCTAATTGGTAGCATCAAACGGTTTCATTACGAGACTCCTAAAGACAATGATTGTTCTTGGATCGTCTCTAATATGCAACAATGTGGAGGTATCGATGACAAAGAAATCTACTTCTTCACTAACTTCAATAAGAAGAAATCTTGTGTTATTAGAAAAGTTGGCTATAATGGTGCCACTTGGAGGGGTGAAAACAAAGGTCAACAAGTATTCTCTTCTATTAATGTCCTAATTGGTAGCATCAAACGGTTTCATTACGAGACTCCTAAAGACAATGATTGTTCTTGGATCGTGCGGGAGTACACAATTGATCATACTTCCATATCCAAAGAATTCATGCATAATTACTACGTATTCTGTATTCTGCGTATTTCGAGAAAGAATATTAAAAAATTTAAAAAAATG

mRNA sequence

GCAGGGGTATAATCATTTTGTTTTACATAATGTTGTCGTGGCTATTACTAGTTCTAACGGGTGTCTGGCCTAAGAAGCTCCCAGAGTATGCTCGCCCGATAAGGAAAGTGGCCCAACGCCTTTTGTTGTGTCGTCTTAAAGGTGTTTTCGAATCACCCTTTTGTTGTGTCGTCTTAAAGGTGTTTTCGAATCACAAATCTTGTGTTATTAGAAAAGTTGGCTATAATGGTGCCACTTGGAGGGGTGAAAACAAAGGTCAACAAGTATTCTCTTCTATTAGTAATGTCCTAATTGGTAGCATCAAACGGTTTCATTACGAGACTCCTAAAGACAATGATTGTTCTTGGATCGTCTCTAATATGCAACAATGTGGAGGTATCGATGACAAAGAAATCTACTTCTTCACTAACTTCAATAAGAAGAAATCTTGTGTTATTAGAAAAGTTGGCTATAATGGTGCCACTTGGAGGGGTGAAAACAAAGGTCAACAAGTATTCTCTTCTATTAATGTCCTAATTGGTAGCATCAAACGGTTTCATTACGAGACTCCTAAAGACAATGATTGTTCTTGGATCGTGCGGGAGTACACAATTGATCATACTTCCATATCCAAAGAATTCATGCATAATTACTACGTATTCTGTATTCTGCGTATTTCGAGAAAGAATATTAAAAAATTTAAAAAAATG

Coding sequence (CDS)

ATGTTGTCGTGGCTATTACTAGTTCTAACGGGTGTCTGGCCTAAGAAGCTCCCAGAGTATGCTCGCCCGATAAGGAAAGTGGCCCAACGCCTTTTGTTGTGTCGTCTTAAAGGTGTTTTCGAATCACCCTTTTGTTGTGTCGTCTTAAAGGTGTTTTCGAATCACAAATCTTGTGTTATTAGAAAAGTTGGCTATAATGGTGCCACTTGGAGGGGTGAAAACAAAGGTCAACAAGTATTCTCTTCTATTAGTAATGTCCTAATTGGTAGCATCAAACGGTTTCATTACGAGACTCCTAAAGACAATGATTGTTCTTGGATCGTCTCTAATATGCAACAATGTGGAGGTATCGATGACAAAGAAATCTACTTCTTCACTAACTTCAATAAGAAGAAATCTTGTGTTATTAGAAAAGTTGGCTATAATGGTGCCACTTGGAGGGGTGAAAACAAAGGTCAACAAGTATTCTCTTCTATTAATGTCCTAATTGGTAGCATCAAACGGTTTCATTACGAGACTCCTAAAGACAATGATTGTTCTTGGATCGTGCGGGAGTACACAATTGATCATACTTCCATATCCAAAGAATTCATGCATAATTACTACGTATTCTGTATTCTGCGTATTTCGAGAAAGAATATTAAAAAATTTAAAAAAATG

Protein sequence

MLSWLLLVLTGVWPKKLPEYARPIRKVAQRLLLCRLKGVFESPFCCVVLKVFSNHKSCVIRKVGYNGATWRGENKGQQVFSSISNVLIGSIKRFHYETPKDNDCSWIVSNMQQCGGIDDKEIYFFTNFNKKKSCVIRKVGYNGATWRGENKGQQVFSSINVLIGSIKRFHYETPKDNDCSWIVREYTIDHTSISKEFMHNYYVFCILRISRKNIKKFKKM
Homology
[Close]
BLAST of Cp4.1LG04g07310 vs. TrEMBL
Match: A0A0A0LWA5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G224380 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.7e-21
Identity = 54/115 (46.96%), Postives = 77/115 (66.96%), Query Frame = 1 

Query: 112 QQCGGIDDKEIYFFTNFNKKKSCVIRKVGYNGATWRGENKGQQVFSSINVLIGSIKRFHY 171
           QQCGG+D ++++FFT   KKKS V+RKVG NGATW GE+K  +VFS  N L+G  KRFHY
Sbjct: 46  QQCGGVDGQDVHFFTCLKKKKSRVVRKVGPNGATWSGESKATKVFSHNNTLVGDFKRFHY 105

Query: 172 ETPK-------DNDCSWIVREYTIDHTSISKEFMHNYYVFCILRISRKNIKKFKK 220
           E PK       +N+ SWI+ EYT+    + +  +H+ +V  +LR  +K +K+ K+
Sbjct: 106 ENPKMKKGGHHNNNYSWIMYEYTLHPNLVPEGVVHHSFVLFMLR--KKILKQDKR 158

[Close]
BLAST of Cp4.1LG04g07310 vs. TrEMBL
Match: A0A0A0L807_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110040 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.5e-18
Identity = 49/115 (42.61%), Postives = 73/115 (63.48%), Query Frame = 1 

Query: 112 QQCGGIDDKEIYFFTNFNKKKSCVIRKVGYNGATWRGENKGQQVFSSINVLIGSIKRFHY 171
           QQC G+  ++++FF    KKKSC +RKVG NGA W GE+K  +VFS  N L+G+ K FHY
Sbjct: 55  QQCRGVHGQDVHFFICLKKKKSCAVRKVGPNGAIWSGESKATKVFSHNNTLVGAFKLFHY 114

Query: 172 ETPK-------DNDCSWIVREYTIDHTSISKEFMHNYYVFCILRISRKNIKKFKK 220
           E PK       +N+ SWI+ EYT+    + +  +H+ +V  +LR  +K +K+ K+
Sbjct: 115 ENPKMKKDGHHNNNYSWIMYEYTLHPNLVPEGVVHHSFVLFMLR--KKILKQDKR 167

[Close]
BLAST of Cp4.1LG04g07310 vs. TrEMBL
Match: V4VDN3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033536mg PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.7e-07
Identity = 40/95 (42.11%), Postives = 54/95 (56.84%), Query Frame = 1 

Query: 119 DKEIYFFTNFNKKKSC---VIRKVGYNGATWRGENKGQQVFS-SINVLIGSIKRFHYETP 178
           D+++YFFT   KK S    + RKVG +G TW+GE+ G+ + S    + IGS KRF YE  
Sbjct: 67  DEDLYFFTQLKKKSSKGSRIDRKVGSSGGTWQGEDAGKDIVSGQSKIKIGSKKRFRYEKQ 126

Query: 179 KDND-CSWIVREYTIDHTSISKEFMHNYYVFCILR 209
              D  +WI+ EYT+    + K    N YV C LR
Sbjct: 127 GCEDHGAWIMHEYTL---HLPKNQAAN-YVLCRLR 157

[Close]
BLAST of Cp4.1LG04g07310 vs. TrEMBL
Match: V4TFZ5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033957mg PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.1e-07
Identity = 40/95 (42.11%), Postives = 54/95 (56.84%), Query Frame = 1 

Query: 119 DKEIYFFTNFNKKKSC---VIRKVGYNGATWRGENKGQQVFS-SINVLIGSIKRFHYETP 178
           D+++YFFT   KK S    + RKVG +G TW+GE+ G+ + S    + IGS KRF YE  
Sbjct: 67  DEDLYFFTQLKKKSSKGSRIDRKVGSSGGTWQGEDAGKDIVSGQSKIKIGSKKRFRYEKQ 126

Query: 179 KDND-CSWIVREYTIDHTSISKEFMHNYYVFCILR 209
              D  +WI+ EYT+    + K    N YV C LR
Sbjct: 127 GCEDHGAWIMHEYTL---HMPKNQATN-YVLCRLR 157

[Close]
BLAST of Cp4.1LG04g07310 vs. TrEMBL
Match: V4TL36_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033436mg PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-06
Identity = 40/95 (42.11%), Postives = 53/95 (55.79%), Query Frame = 1 

Query: 119 DKEIYFFTNFNKKKSC---VIRKVGYNGATWRGENKGQQ-VFSSINVLIGSIKRFHYETP 178
           D+++YFFT   KK S    + RKVG +G TW+GE+ G+  V     + IGS KRF YE  
Sbjct: 67  DEDLYFFTQLKKKSSKGSRIDRKVGSSGGTWQGEDAGKDIVIGQSKIKIGSKKRFRYEKQ 126

Query: 179 KDND-CSWIVREYTIDHTSISKEFMHNYYVFCILR 209
              D  +WI+ EYT+    + K    N YV C LR
Sbjct: 127 GCEDHGAWIMHEYTL---HMPKNQATN-YVLCRLR 157

[Close]
BLAST of Cp4.1LG04g07310 vs. NCBI nr
Match: gi|659085728|ref|XP_008443570.1| (PREDICTED: NAC domain-containing protein 55-like [Cucumis melo])

HSP 1 Score: 119.8 bits (299), Expect = 6.1e-24
Identity = 58/117 (49.57%), Postives = 82/117 (70.09%), Query Frame = 1 

Query: 112 QQCGGIDDKEIYFFTNFNKKKSCVIRKVGYNGATWRGENKGQQVFSSI--NVLIGSIKRF 171
           Q+CGG+D +++YFFT   KKKS +IRKVG NG TW  EN+ +QVFSS   ++L+GS+KRF
Sbjct: 53  QKCGGVDKQDVYFFTTLKKKKSRIIRKVGSNGNTWSCENRARQVFSSTIDHLLLGSVKRF 112

Query: 172 HYETPKD------NDCSWIVREYTIDHTSISKEFMHNYYVFCILRISRKNIKKFKKM 221
           HY+ PK       NDC+WI+ EYT+D + + K  +H+ YV C++   RK I K +K+
Sbjct: 113 HYQKPKAKDCTDINDCTWIMYEYTLDPSIVPKGLVHDSYVLCMI---RKKIVKSQKI 166

[Close]
BLAST of Cp4.1LG04g07310 vs. NCBI nr
Match: gi|778664815|ref|XP_011660358.1| (PREDICTED: uncharacterized protein LOC105436381 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 3.0e-23
Identity = 59/112 (52.68%), Postives = 79/112 (70.54%), Query Frame = 1 

Query: 112 QQCGGIDDKEIYFFTNFNKKKSCVIRKVGYNGATWRGENKGQQVFSSI--NVLIGSIKRF 171
           QQC G+D+K+IYFFT   KKKS +IRKVG NG TW GENK QQVFSS   N+L+G++KRF
Sbjct: 53  QQCRGVDNKDIYFFTTLQKKKSRIIRKVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRF 112

Query: 172 HYETPK-DNDCSWIVREYTIDHTSISKEFMHNYYVFCILRISRKNIKKFKKM 221
            YE  +   DC+WI+ EYT++   + +  +H+ YV C++   RK I K +KM
Sbjct: 113 RYEKSQVKEDCTWIMYEYTLNPFIVPEGLVHDSYVLCMI---RKKIVKSEKM 161

[Close]
BLAST of Cp4.1LG04g07310 vs. NCBI nr
Match: gi|700210011|gb|KGN65107.1| (hypothetical protein Csa_1G224380 [Cucumis sativus])

HSP 1 Score: 109.4 bits (272), Expect = 8.2e-21
Identity = 54/115 (46.96%), Postives = 77/115 (66.96%), Query Frame = 1 

Query: 112 QQCGGIDDKEIYFFTNFNKKKSCVIRKVGYNGATWRGENKGQQVFSSINVLIGSIKRFHY 171
           QQCGG+D ++++FFT   KKKS V+RKVG NGATW GE+K  +VFS  N L+G  KRFHY
Sbjct: 46  QQCGGVDGQDVHFFTCLKKKKSRVVRKVGPNGATWSGESKATKVFSHNNTLVGDFKRFHY 105

Query: 172 ETPK-------DNDCSWIVREYTIDHTSISKEFMHNYYVFCILRISRKNIKKFKK 220
           E PK       +N+ SWI+ EYT+    + +  +H+ +V  +LR  +K +K+ K+
Sbjct: 106 ENPKMKKGGHHNNNYSWIMYEYTLHPNLVPEGVVHHSFVLFMLR--KKILKQDKR 158

[Close]
BLAST of Cp4.1LG04g07310 vs. NCBI nr
Match: gi|700201123|gb|KGN56256.1| (hypothetical protein Csa_3G110040 [Cucumis sativus])

HSP 1 Score: 99.8 bits (247), Expect = 6.5e-18
Identity = 49/115 (42.61%), Postives = 73/115 (63.48%), Query Frame = 1 

Query: 112 QQCGGIDDKEIYFFTNFNKKKSCVIRKVGYNGATWRGENKGQQVFSSINVLIGSIKRFHY 171
           QQC G+  ++++FF    KKKSC +RKVG NGA W GE+K  +VFS  N L+G+ K FHY
Sbjct: 55  QQCRGVHGQDVHFFICLKKKKSCAVRKVGPNGAIWSGESKATKVFSHNNTLVGAFKLFHY 114

Query: 172 ETPK-------DNDCSWIVREYTIDHTSISKEFMHNYYVFCILRISRKNIKKFKK 220
           E PK       +N+ SWI+ EYT+    + +  +H+ +V  +LR  +K +K+ K+
Sbjct: 115 ENPKMKKDGHHNNNYSWIMYEYTLHPNLVPEGVVHHSFVLFMLR--KKILKQDKR 167

[Close]
BLAST of Cp4.1LG04g07310 vs. NCBI nr
Match: gi|657954673|ref|XP_008368781.1| (PREDICTED: NAC domain-containing protein 12-like [Malus domestica])

HSP 1 Score: 63.9 bits (154), Expect = 3.9e-07
Identity = 45/116 (38.79%), Postives = 64/116 (55.17%), Query Frame = 1 

Query: 112 QQCGGIDDKEIYFFTNFNKKK---SCVIRKVGYNGATWRGENKGQQVFSS-INVLIGSIK 171
           Q+C   DDK+IY FT  N K    S V R VG  G TW+GE+ G+++++S I   IG  K
Sbjct: 65  QEC--TDDKDIYVFTTLNSKAPNGSRVCRTVGTTGGTWKGEDAGKEIYASGIKQAIGFRK 124

Query: 172 RFHYET--PKDNDCSWIVREYTIDHTSI-SKEFMHNYYVFCILRISRKNIKKFKKM 221
           RF Y       ND  WI+ E+ +D + + +K       V CILR  + +I K +K+
Sbjct: 125 RFTYRNKGSPQND-HWIMLEFHLDPSLLRNKHHQEKNIVLCILR-RKDDISKKRKL 176

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g07310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG04g07310 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWA5_CUCSA5.7e-2146.96Uncharacterized protein OS=Cucumis sativus GN=Csa_1G224380 PE=4 SV=1[more]
A0A0A0L807_CUCSA4.5e-1842.61Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110040 PE=4 SV=1[more]
V4VDN3_9ROSI4.7e-0742.11Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033536mg PE=4 SV=1[more]
V4TFZ5_9ROSI6.1e-0742.11Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033957mg PE=4 SV=1[more]
V4TL36_9ROSI1.0e-0642.11Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033436mg PE=4 SV=1[more]
BLAST of Cp4.1LG04g07310 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG04g07310 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659085728|ref|XP_008443570.1|6.1e-2449.57PREDICTED: NAC domain-containing protein 55-like [Cucumis melo][more]
gi|778664815|ref|XP_011660358.1|3.0e-2352.68PREDICTED: uncharacterized protein LOC105436381 [Cucumis sativus][more]
gi|700210011|gb|KGN65107.1|8.2e-2146.96hypothetical protein Csa_1G224380 [Cucumis sativus][more]
gi|700201123|gb|KGN56256.1|6.5e-1842.61hypothetical protein Csa_3G110040 [Cucumis sativus][more]
gi|657954673|ref|XP_008368781.1|3.9e-0738.79PREDICTED: NAC domain-containing protein 12-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003441NAC-dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g07310.1Cp4.1LG04g07310.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003441NAC domainunknownSSF101941NAC domaincoord: 117..208
score: 2.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g07310CmoCh11G014460Cucurbita moschata (Rifu)cmocpeB126
Cp4.1LG04g07310Carg23055Silver-seed gourdcarcpeB1033
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g07310Cucurbita pepo (Zucchini)cpecpeB269
Cp4.1LG04g07310Cucurbita pepo (Zucchini)cpecpeB400
Cp4.1LG04g07310Cucumber (Gy14) v1cgycpeB0601
Cp4.1LG04g07310Cucumber (Gy14) v1cgycpeB0602
Cp4.1LG04g07310Cucurbita maxima (Rimu)cmacpeB154
Cp4.1LG04g07310Cucurbita maxima (Rimu)cmacpeB539
Cp4.1LG04g07310Cucurbita maxima (Rimu)cmacpeB749
Cp4.1LG04g07310Cucurbita moschata (Rifu)cmocpeB321
Cp4.1LG04g07310Cucurbita moschata (Rifu)cmocpeB494
Cp4.1LG04g07310Cucurbita moschata (Rifu)cmocpeB703
Cp4.1LG04g07310Wild cucumber (PI 183967)cpecpiB696
Cp4.1LG04g07310Wild cucumber (PI 183967)cpecpiB697
Cp4.1LG04g07310Cucumber (Chinese Long) v2cpecuB694
Cp4.1LG04g07310Cucumber (Chinese Long) v2cpecuB695
Cp4.1LG04g07310Bottle gourd (USVL1VR-Ls)cpelsiB543
Cp4.1LG04g07310Bottle gourd (USVL1VR-Ls)cpelsiB548
Cp4.1LG04g07310Watermelon (Charleston Gray)cpewcgB576
Cp4.1LG04g07310Watermelon (97103) v1cpewmB627
Cp4.1LG04g07310Melon (DHL92) v3.5.1cpemeB604
Cp4.1LG04g07310Melon (DHL92) v3.5.1cpemeB614
Cp4.1LG04g07310Cucumber (Gy14) v2cgybcpeB967
Cp4.1LG04g07310Cucumber (Gy14) v2cgybcpeB969
Cp4.1LG04g07310Melon (DHL92) v3.6.1cpemedB715
Cp4.1LG04g07310Melon (DHL92) v3.6.1cpemedB726
Cp4.1LG04g07310Melon (DHL92) v3.6.1cpemedB769
Cp4.1LG04g07310Silver-seed gourdcarcpeB0409
Cp4.1LG04g07310Silver-seed gourdcarcpeB0529
Cp4.1LG04g07310Cucumber (Chinese Long) v3cpecucB0867
Cp4.1LG04g07310Cucumber (Chinese Long) v3cpecucB0868
Cp4.1LG04g07310Wax gourdcpewgoB0856