Cp4.1LG04g02250 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g02250
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionFilamentous hemagglutinin transporter fhaC
LocationCp4.1LG04 : 7918265 .. 7919693 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTAGCGCTCTCCATTCAATCACAAACAGTGAATCCAAACCCCCCAATCCCCTCTCTCTCTCCTTTCCCCTCTGCCTCCCTCTATAAAGCTCCAAATATGGCCGCCCAAGTGAGTAGTCTTATTCGAGTTCTCGCCGGCTACGAGGACCAAGATAACCGGACCGCCCTCGAGGAATCAACGCCTCTCACTACTCGTGATTTGCTCGGTCAATCTTCCAACCTCGCTGACTCTCAGGAACTGGACCTCGATTTGCAGGTTCCCTCCGGCTGGGAAAAGCGCCTCGACTTGAAGGTTTCTTCAATTTCATCCCTTTTCAACTTACAAAATCTCAACACCTCCTTCATTTTGTAGCAACTCTTCGTTAAATCTTCCAATTCAAGATTTTTTTTTATTCAATTCAGAAGTTGGGGTGGGAACTATTTTATTGCACTTGTGGGCGTGGCCTATGTTCTTGGATGCTCTGCGATTACTGTAGCTTTTTTTTTTTTTTATATTTTTCCTCTGATTTTAATGACATTCATTGCGGCTCTTTATTTTTATTTTTTAAAAGAGTTCTTGGTGTTTGTACTCGCCTGATTAATTATCCCCACCCTGACCCTATTCAATTACCACCCCCTCTCCTCTGAAATCATTGGGTTTTATTTATTTATTTATTTAAAGAAAAAGAATTCCTCTGTTCGTGTTTGCAGTCGGGAAAAGTTTACATACAGAGAAGTCAAACTCCAGATTCTCCTCTGAATTCAGATTCCAAACAACGCCAAATGAAGAATCAAACAGAATCCAAATCCCAGGACTTGAATTTCCCCCCATCTCCTTCAAAACGAACCTTAAATCTCTTCAATGAAACCAGCTTGGGTTTGAATTTGACGTCGTCGACCAATTACGCCAGCGTTTGCACTCTGGATAAGGTCAAATCTGCTTTAGAAAGGGCCGACAAGGAGCTGATTAAAAAACGGTCTACGGTTTGGAAGTCGCCGTCCTCCCCCTCGGCGGCGAAGGAAATTCAAGAAGAAGAGGCGGCGGAAAGTAGAAAGTCGGCGGCGCCGATGGCGGTGGGTTGTCCTGGATGTCTATCTTATGTATTGGTGACGAAAAACAACCCAAGATGTCCTCGATGCAATTCTGTTGTTCCATTGGCGAGCATGAAGAAACCTCGAATCGACCTAAACATATCCATATAAAAATGGTCGGGAATGGTTCATCATGAATGAAGATATAAAATGAAGAAATTTGGGGCATGGTTCTGTTGTTGCGGGGGTACATGTAAAATGAACATATTTACACCAAAAATATTATGCCTTCCATGGTTCAATTTGTTGTTTTTCTCAGGCTCTTTCAATTTTTGTTGTGTTTGACCATTTTTTAATAAATTTTATTTGGATATAAAAGTAAAGTTGAATATGGGATATTTTGGGTTAAAAAAAAAGG

mRNA sequence

CGTAGCGCTCTCCATTCAATCACAAACAGTGAATCCAAACCCCCCAATCCCCTCTCTCTCTCCTTTCCCCTCTGCCTCCCTCTATAAAGCTCCAAATATGGCCGCCCAAGTGAGTAGTCTTATTCGAGTTCTCGCCGGCTACGAGGACCAAGATAACCGGACCGCCCTCGAGGAATCAACGCCTCTCACTACTCGTGATTTGCTCGGTCAATCTTCCAACCTCGCTGACTCTCAGGAACTGGACCTCGATTTGCAGGTTCCCTCCGGCTGGGAAAAGCGCCTCGACTTGAAGTCGGGAAAAGTTTACATACAGAGAAGTCAAACTCCAGATTCTCCTCTGAATTCAGATTCCAAACAACGCCAAATGAAGAATCAAACAGAATCCAAATCCCAGGACTTGAATTTCCCCCCATCTCCTTCAAAACGAACCTTAAATCTCTTCAATGAAACCAGCTTGGGTTTGAATTTGACGTCGTCGACCAATTACGCCAGCGTTTGCACTCTGGATAAGGTCAAATCTGCTTTAGAAAGGGCCGACAAGGAGCTGATTAAAAAACGGTCTACGGTTTGGAAGTCGCCGTCCTCCCCCTCGGCGGCGAAGGAAATTCAAGAAGAAGAGGCGGCGGAAAGTAGAAAGTCGGCGGCGCCGATGGCGGTGGGTTGTCCTGGATGTCTATCTTATGTATTGGTGACGAAAAACAACCCAAGATGTCCTCGATGCAATTCTGTTGTTCCATTGGCGAGCATGAAGAAACCTCGAATCGACCTAAACATATCCATATAAAAATGGTCGGGAATGGTTCATCATGAATGAAGATATAAAATGAAGAAATTTGGGGCATGGTTCTGTTGTTGCGGGGGTACATGTAAAATGAACATATTTACACCAAAAATATTATGCCTTCCATGGTTCAATTTGTTGTTTTTCTCAGGCTCTTTCAATTTTTGTTGTGTTTGACCATTTTTTAATAAATTTTATTTGGATATAAAAGTAAAGTTGAATATGGGATATTTTGGGTTAAAAAAAAAGG

Coding sequence (CDS)

ATGGCCGCCCAAGTGAGTAGTCTTATTCGAGTTCTCGCCGGCTACGAGGACCAAGATAACCGGACCGCCCTCGAGGAATCAACGCCTCTCACTACTCGTGATTTGCTCGGTCAATCTTCCAACCTCGCTGACTCTCAGGAACTGGACCTCGATTTGCAGGTTCCCTCCGGCTGGGAAAAGCGCCTCGACTTGAAGTCGGGAAAAGTTTACATACAGAGAAGTCAAACTCCAGATTCTCCTCTGAATTCAGATTCCAAACAACGCCAAATGAAGAATCAAACAGAATCCAAATCCCAGGACTTGAATTTCCCCCCATCTCCTTCAAAACGAACCTTAAATCTCTTCAATGAAACCAGCTTGGGTTTGAATTTGACGTCGTCGACCAATTACGCCAGCGTTTGCACTCTGGATAAGGTCAAATCTGCTTTAGAAAGGGCCGACAAGGAGCTGATTAAAAAACGGTCTACGGTTTGGAAGTCGCCGTCCTCCCCCTCGGCGGCGAAGGAAATTCAAGAAGAAGAGGCGGCGGAAAGTAGAAAGTCGGCGGCGCCGATGGCGGTGGGTTGTCCTGGATGTCTATCTTATGTATTGGTGACGAAAAACAACCCAAGATGTCCTCGATGCAATTCTGTTGTTCCATTGGCGAGCATGAAGAAACCTCGAATCGACCTAAACATATCCATATAA

Protein sequence

MAAQVSSLIRVLAGYEDQDNRTALEESTPLTTRDLLGQSSNLADSQELDLDLQVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKQRQMKNQTESKSQDLNFPPSPSKRTLNLFNETSLGLNLTSSTNYASVCTLDKVKSALERADKELIKKRSTVWKSPSSPSAAKEIQEEEAAESRKSAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLASMKKPRIDLNISI
Homology
[Close]
BLAST of Cp4.1LG04g02250 vs. TrEMBL
Match: A0A0A0K3J9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G238440 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.6e-98
Identity = 202/243 (83.13%), Postives = 213/243 (87.65%), Query Frame = 1 

Query: 1   MAAQVSSLIRVLAGYEDQDNRTAL---EESTPLTTRDLLGQSSNLADSQELDLDLQVPSG 60
           MAA+VSSLIRVLAGY+D DNRTAL   ++ST L TRDLLGQSSNL DSQELDLDLQVP+G
Sbjct: 1   MAAEVSSLIRVLAGYKDDDNRTALGNGQDSTALVTRDLLGQSSNLTDSQELDLDLQVPTG 60

Query: 61  WEKRLDLKSGKVYIQRSQTPDSPLNSDSKQRQMKNQTESKSQDLNFPPSPSKRTLNLFNE 120
           WEKRLDLKSGKVYIQRSQTPDSPLNSDSKQ QM NQTESK QDLNFPPSPSKRTLNLFNE
Sbjct: 61  WEKRLDLKSGKVYIQRSQTPDSPLNSDSKQIQMINQTESKFQDLNFPPSPSKRTLNLFNE 120

Query: 121 TSLGLNLT---SSTNYASVCTLDKVKSALERADKELIKKRSTVWKSPSSPS--------- 180
           TSL L LT   SSTNYASVCTLDKVKSALERADKEL+KKRS++WKS SSPS         
Sbjct: 121 TSLDLKLTSSPSSTNYASVCTLDKVKSALERADKELVKKRSSLWKSASSPSYSSSSSSAA 180

Query: 181 AAKEIQEEEAAESRKSAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLASMKKPRIDLN 229
           A KEIQEEEAAE R SAAPMAVGCPGCLSYVLV KNNPRCPRCNSVVPL ++KKPRIDLN
Sbjct: 181 AGKEIQEEEAAEIRNSAAPMAVGCPGCLSYVLVMKNNPRCPRCNSVVPLPTIKKPRIDLN 240

[Close]
BLAST of Cp4.1LG04g02250 vs. TrEMBL
Match: B9H627_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s09960g PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.3e-63
Identity = 151/246 (61.38%), Postives = 179/246 (72.76%), Query Frame = 1 

Query: 1   MAAQVSSLIRVLAGYEDQDNRTALE---ESTPLTTRDLLGQSSNLADS-----QELDLDL 60
           MAA+VSSL+R+L+GY D  N  +     +ST L TRDLLG      DS     QELDLDL
Sbjct: 1   MAAEVSSLVRLLSGYTDDRNVVSEPGGAKSTTLITRDLLGGGGGGGDSVESESQELDLDL 60

Query: 61  QVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKQRQMKNQTESKSQDLNFPPSPSKRTL 120
           QVPSGWEKRLDLKSGKVY+QR  +  SP +S S  R   NQT +K QDLNFPPSPSK TL
Sbjct: 61  QVPSGWEKRLDLKSGKVYLQRCNSSSSP-SSSSDYRNQTNQTVAKLQDLNFPPSPSKITL 120

Query: 121 NLFNETSLGLNLTSS---TNYASVCTLDKVKSALERADKELIKKRST-VWKSPSSP---- 180
           NLF+E +L LN  SS   +NY SVCTLD+VKSALERA+KE  +K+S+ +WKS SSP    
Sbjct: 121 NLFDEGNLELNFVSSPMSSNYQSVCTLDRVKSALERAEKEPGRKQSSSLWKSSSSPPYSS 180

Query: 181 --SAAKEIQEEEAAESRKSAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLASMKKPRI 229
             S+ ++IQEEE  E    A+P+A GCPGCLSYVL+TK NPRCPRCNSVV + ++KKP I
Sbjct: 181 SSSSVRDIQEEENEEKLLEASPVAAGCPGCLSYVLITKINPRCPRCNSVVLMPTVKKPMI 240

[Close]
BLAST of Cp4.1LG04g02250 vs. TrEMBL
Match: B9HGV7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s08220g PE=4 SV=2)

HSP 1 Score: 248.8 bits (634), Expect = 6.2e-63
Identity = 146/241 (60.58%), Postives = 176/241 (73.03%), Query Frame = 1 

Query: 1   MAAQVSSLIRVLAGYEDQDNRTALE---ESTPLTTRDLLGQSSNLADSQELDLDLQVPSG 60
           MAA+VSSL+R+ +GY+D  N  +     +ST L TRDLLG ++   +S ELDLDLQVPSG
Sbjct: 1   MAAEVSSLVRLFSGYKDDRNAGSEPGGAKSTALITRDLLGGATLETESLELDLDLQVPSG 60

Query: 61  WEKRLDLKSGKVYIQRSQTPDSPLNSDSKQRQMKNQTESKSQDLNFPPSPSKRTLNLFNE 120
           WEKRLDLKSGKVY+QR    +SP +S S  R   NQT +K QDLNFPPSPSKRTLNLF+E
Sbjct: 61  WEKRLDLKSGKVYLQRCNPSNSP-SSSSDYRHQTNQTVAKLQDLNFPPSPSKRTLNLFDE 120

Query: 121 TSLGLNLT---SSTNYASVCTLDKVKSALERADKELIKKRS-TVWKSPSSP------SAA 180
            +L L L    SS++Y SVCTLD VKSALERA++EL +KRS ++WKS  SP      S  
Sbjct: 121 GNLELKLVASPSSSSYRSVCTLDSVKSALERAERELGRKRSASLWKSSMSPPYSSSSSCI 180

Query: 181 KEIQEEEAAESRKSAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLASMKKPRIDLNIS 229
           +EIQE    E   + +P A GCPGCLSYVL+ KNNP+CPRCNS VP+  +KKPRIDLNIS
Sbjct: 181 REIQEGGNDEKLGAPSPAAAGCPGCLSYVLIMKNNPKCPRCNSAVPMPMVKKPRIDLNIS 240

[Close]
BLAST of Cp4.1LG04g02250 vs. TrEMBL
Match: A0A067JZX2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22624 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.5e-61
Identity = 147/252 (58.33%), Postives = 182/252 (72.22%), Query Frame = 1 

Query: 1   MAAQVSSLIRVLAGYEDQD---NRTALEESTPLTTRDLLG-------QSSNLADSQELDL 60
           MAA VS+L R L+GY+D     N +   +ST L TRDLLG        S+   DSQELDL
Sbjct: 1   MAADVSTLFRALSGYKDDRTVANESVGGKSTALITRDLLGGSGVDGYASTIKDDSQELDL 60

Query: 61  DLQVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKQRQMKNQTESKSQDLNFPPSPSKR 120
           DLQVP+GWEKRLDLKSGKVY+QR  + +SP +S  ++ ++ NQT SK QDLNFPPSPSK 
Sbjct: 61  DLQVPTGWEKRLDLKSGKVYLQRCNSSNSPSSSSDQRHKITNQTVSKLQDLNFPPSPSKI 120

Query: 121 TLNLFNETSLGLNL-------TSSTNYASVCTLDKVKSALERADKELIKKRS-TVWKSPS 180
           TLNLF+E++L L L       TSS  Y SV TLDKVKSALERA+KE I+KRS T+WKS  
Sbjct: 121 TLNLFDESNLELKLVSSPSSSTSSGKYLSVHTLDKVKSALERAEKEPIRKRSTTLWKSRL 180

Query: 181 SP------SAAKEIQEEEAAESRKSAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLAS 229
           SP      S+ K++ ++E  E + +++P+A GCPGCLSYVL+ KNNP+CPRC++VVPL  
Sbjct: 181 SPSYSSSSSSMKDLPDDE-DEEKLTSSPVAAGCPGCLSYVLIMKNNPKCPRCSTVVPLPM 240

[Close]
BLAST of Cp4.1LG04g02250 vs. TrEMBL
Match: A0A072V8W9_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_2g066700 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.8e-60
Identity = 146/251 (58.17%), Postives = 181/251 (72.11%), Query Frame = 1 

Query: 1   MAAQVSSLIRVLAG--YEDQDNRTAL-----EESTPLTTRDLLGQSSNLADSQELDLDLQ 60
           MA +VSSL+RVL G  Y+D+ +RT       E+ST L TRDLLG SS++ +SQELDLDLQ
Sbjct: 1   MATEVSSLVRVLGGGGYKDEQHRTVGNDSHGEKSTALITRDLLGGSSSI-ESQELDLDLQ 60

Query: 61  VPSGWEKRLDLKSGKVYIQRSQT-PDSPLNSDSKQRQMKNQTESKSQDLNFPPSPSKRTL 120
           VP+GWEKRLDL+SGKVYIQR  T   SP+   S+Q+     T  K QDLNFP + S   L
Sbjct: 61  VPNGWEKRLDLQSGKVYIQRCNTLTQSPI---SEQKNQGKSTPPKLQDLNFPSTQSNVPL 120

Query: 121 NLFNETSLGLNLTSS----TNYASVCTLDKVKSALERADKELIKKRSTVWKS------PS 180
           NLF+E++L L L SS    +NY SVCTLDKVKSALERA+KE I+KRST  KS      PS
Sbjct: 121 NLFDESNLDLKLVSSALPTSNYQSVCTLDKVKSALERAEKEPIRKRSTFLKSSISATSPS 180

Query: 181 SPSAAKEI-----QEEEAAESRKSAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLASM 229
             S++  +     Q+EE+ + +  ++PMA GCPGCLSYVL+ KNNP+CPRCNS+VP+ +M
Sbjct: 181 YSSSSSSMREPNHQDEESDQEKMISSPMAAGCPGCLSYVLIMKNNPKCPRCNSIVPIPTM 240

[Close]
BLAST of Cp4.1LG04g02250 vs. TAIR10
Match: AT1G79160.1 (AT1G79160.1 unknown protein)

HSP 1 Score: 173.3 bits (438), Expect = 1.7e-43
Identity = 120/249 (48.19%), Postives = 151/249 (60.64%), Query Frame = 1 

Query: 1   MAAQVSSLIRVLAGYEDQ----DNRTALEESTPLTTRDLLGQSSNLAD--SQELDLDLQV 60
           MAA VSSL+R+L+GY+D      +    + S  L TRDLLG         S ELDLDLQV
Sbjct: 5   MAADVSSLVRLLSGYKDDRAVVKDSAGAKSSAALMTRDLLGNGRGGGGDRSLELDLDLQV 64

Query: 61  PSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKQRQMKNQTESKSQDLNFPPSPSKRT--L 120
           P+G+EKRLDLKSGKVY+QR  +  S   +++ Q    NQT    QDLNFPP     +  L
Sbjct: 65  PTGYEKRLDLKSGKVYLQRCNSTSSSSITNADQT---NQTVPTFQDLNFPPPTLNNSPLL 124

Query: 121 NLFNETSLGLNLTSST--------NYASVCTLDKVKSALERADKE--LIKKRSTVWKSPS 180
           NLF++T+  L L  S+        N  SVCTLDKVKSALERA+++  + KKR       S
Sbjct: 125 NLFDDTTPELKLLPSSRSSRPNTSNLQSVCTLDKVKSALERAERDPAMFKKRQ------S 184

Query: 181 SPSAAKEIQEEEAAESRKSAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLAS---MKK 229
                 +    EA      A+P+  GCPGCLSYVLV  NNP+CPRC+++VPL +    KK
Sbjct: 185 PDDTVYDHYRTEAV-----ASPVVAGCPGCLSYVLVMMNNPKCPRCDTIVPLPTNPMKKK 239

[Close]
BLAST of Cp4.1LG04g02250 vs. TAIR10
Match: AT1G16500.1 (AT1G16500.1 unknown protein)

HSP 1 Score: 167.5 bits (423), Expect = 9.3e-42
Identity = 121/271 (44.65%), Postives = 158/271 (58.30%), Query Frame = 1 

Query: 1   MAAQVSSLIRVLAGYEDQDNRTALEEST------PLTTRDLLGQSSNLA-------DSQE 60
           MAA VSSL+R+L+ ++D  +RT +++ST       L TRDLLG    +         S E
Sbjct: 1   MAADVSSLVRILSRFKD--DRTVVKDSTGPRSTVALMTRDLLGIGGCVGGGGGGDEQSLE 60

Query: 61  LDLDLQVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKQRQ----MKNQTESKSQDLNF 120
           LDLD+QVP+GWEKRLDLKSGKVY+Q+     S  +S            NQT  + QDLN 
Sbjct: 61  LDLDVQVPNGWEKRLDLKSGKVYLQQQCNSTSSSSSSHHHHHHHEDQTNQTVPRFQDLNV 120

Query: 121 PPS----PSKRTLNLFNE---TSLGLNLTSST------------------NY-ASVCTLD 180
           PP     P+K  L+LF++   TSL L L  S+                  +Y +SVCTLD
Sbjct: 121 PPISDKFPAKPLLSLFDDDDDTSLELKLVPSSISRPLPPPLSSFSPNQSLSYLSSVCTLD 180

Query: 181 KVKSALERADKELIKKRSTVWKSPSSPSAAKEIQEEEAAESRKSAAPMAVGCPGCLSYVL 229
           KVK ALERA+K+  K++S     P           +  A +  +A+ +A GCPGCLSYV 
Sbjct: 181 KVKLALERAEKDTKKRQS-----PEDDGVY-----DGTASATVAASQVAAGCPGCLSYVF 240

[Close]
BLAST of Cp4.1LG04g02250 vs. NCBI nr
Match: gi|449444140|ref|XP_004139833.1| (PREDICTED: uncharacterized protein LOC101214550 [Cucumis sativus])

HSP 1 Score: 367.1 bits (941), Expect = 2.3e-98
Identity = 202/243 (83.13%), Postives = 213/243 (87.65%), Query Frame = 1 

Query: 1   MAAQVSSLIRVLAGYEDQDNRTAL---EESTPLTTRDLLGQSSNLADSQELDLDLQVPSG 60
           MAA+VSSLIRVLAGY+D DNRTAL   ++ST L TRDLLGQSSNL DSQELDLDLQVP+G
Sbjct: 1   MAAEVSSLIRVLAGYKDDDNRTALGNGQDSTALVTRDLLGQSSNLTDSQELDLDLQVPTG 60

Query: 61  WEKRLDLKSGKVYIQRSQTPDSPLNSDSKQRQMKNQTESKSQDLNFPPSPSKRTLNLFNE 120
           WEKRLDLKSGKVYIQRSQTPDSPLNSDSKQ QM NQTESK QDLNFPPSPSKRTLNLFNE
Sbjct: 61  WEKRLDLKSGKVYIQRSQTPDSPLNSDSKQIQMINQTESKFQDLNFPPSPSKRTLNLFNE 120

Query: 121 TSLGLNLT---SSTNYASVCTLDKVKSALERADKELIKKRSTVWKSPSSPS--------- 180
           TSL L LT   SSTNYASVCTLDKVKSALERADKEL+KKRS++WKS SSPS         
Sbjct: 121 TSLDLKLTSSPSSTNYASVCTLDKVKSALERADKELVKKRSSLWKSASSPSYSSSSSSAA 180

Query: 181 AAKEIQEEEAAESRKSAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLASMKKPRIDLN 229
           A KEIQEEEAAE R SAAPMAVGCPGCLSYVLV KNNPRCPRCNSVVPL ++KKPRIDLN
Sbjct: 181 AGKEIQEEEAAEIRNSAAPMAVGCPGCLSYVLVMKNNPRCPRCNSVVPLPTIKKPRIDLN 240

[Close]
BLAST of Cp4.1LG04g02250 vs. NCBI nr
Match: gi|659092547|ref|XP_008447115.1| (PREDICTED: uncharacterized protein LOC103489640 [Cucumis melo])

HSP 1 Score: 367.1 bits (941), Expect = 2.3e-98
Identity = 202/243 (83.13%), Postives = 214/243 (88.07%), Query Frame = 1 

Query: 1   MAAQVSSLIRVLAGYEDQDNRTAL---EESTPLTTRDLLGQSSNLADSQELDLDLQVPSG 60
           MAA+VSSLIRVLAGY++ DNRTAL   ++ST L TRDLLGQSSNL DSQELDLDLQVP+G
Sbjct: 1   MAAEVSSLIRVLAGYKEDDNRTALGNGQDSTALVTRDLLGQSSNLTDSQELDLDLQVPTG 60

Query: 61  WEKRLDLKSGKVYIQRSQTPDSPLNSDSKQRQMKNQTESKSQDLNFPPSPSKRTLNLFNE 120
           WEKRLDLKSGKVYIQRSQTPDSPLNSDSKQ QM NQTESK QDLNFPPSPSKRTLNLFNE
Sbjct: 61  WEKRLDLKSGKVYIQRSQTPDSPLNSDSKQIQMINQTESKFQDLNFPPSPSKRTLNLFNE 120

Query: 121 TSLGLNLTS----STNYASVCTLDKVKSALERADKELIKKRSTVWKSPSSPS-------- 180
           TSL L LTS    STNYASVCTLDKVKSALERADKEL+KKRS++WKS SSPS        
Sbjct: 121 TSLDLKLTSSPSPSTNYASVCTLDKVKSALERADKELVKKRSSLWKSASSPSYSSSSSSA 180

Query: 181 AAKEIQEEEAAESRKSAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLASMKKPRIDLN 229
           AAKEIQEEEAAE R SAAPMAVGCPGCLSYVLV KNNPRCPRCNSVVPL ++KKPRIDLN
Sbjct: 181 AAKEIQEEEAAEIRNSAAPMAVGCPGCLSYVLVMKNNPRCPRCNSVVPLPTIKKPRIDLN 240

[Close]
BLAST of Cp4.1LG04g02250 vs. NCBI nr
Match: gi|224081429|ref|XP_002306406.1| (hypothetical protein POPTR_0005s09960g [Populus trichocarpa])

HSP 1 Score: 251.1 bits (640), Expect = 1.8e-63
Identity = 151/246 (61.38%), Postives = 179/246 (72.76%), Query Frame = 1 

Query: 1   MAAQVSSLIRVLAGYEDQDNRTALE---ESTPLTTRDLLGQSSNLADS-----QELDLDL 60
           MAA+VSSL+R+L+GY D  N  +     +ST L TRDLLG      DS     QELDLDL
Sbjct: 1   MAAEVSSLVRLLSGYTDDRNVVSEPGGAKSTTLITRDLLGGGGGGGDSVESESQELDLDL 60

Query: 61  QVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKQRQMKNQTESKSQDLNFPPSPSKRTL 120
           QVPSGWEKRLDLKSGKVY+QR  +  SP +S S  R   NQT +K QDLNFPPSPSK TL
Sbjct: 61  QVPSGWEKRLDLKSGKVYLQRCNSSSSP-SSSSDYRNQTNQTVAKLQDLNFPPSPSKITL 120

Query: 121 NLFNETSLGLNLTSS---TNYASVCTLDKVKSALERADKELIKKRST-VWKSPSSP---- 180
           NLF+E +L LN  SS   +NY SVCTLD+VKSALERA+KE  +K+S+ +WKS SSP    
Sbjct: 121 NLFDEGNLELNFVSSPMSSNYQSVCTLDRVKSALERAEKEPGRKQSSSLWKSSSSPPYSS 180

Query: 181 --SAAKEIQEEEAAESRKSAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLASMKKPRI 229
             S+ ++IQEEE  E    A+P+A GCPGCLSYVL+TK NPRCPRCNSVV + ++KKP I
Sbjct: 181 SSSSVRDIQEEENEEKLLEASPVAAGCPGCLSYVLITKINPRCPRCNSVVLMPTVKKPMI 240

[Close]
BLAST of Cp4.1LG04g02250 vs. NCBI nr
Match: gi|566180223|ref|XP_002310095.2| (hypothetical protein POPTR_0007s08220g [Populus trichocarpa])

HSP 1 Score: 248.8 bits (634), Expect = 9.0e-63
Identity = 146/241 (60.58%), Postives = 176/241 (73.03%), Query Frame = 1 

Query: 1   MAAQVSSLIRVLAGYEDQDNRTALE---ESTPLTTRDLLGQSSNLADSQELDLDLQVPSG 60
           MAA+VSSL+R+ +GY+D  N  +     +ST L TRDLLG ++   +S ELDLDLQVPSG
Sbjct: 1   MAAEVSSLVRLFSGYKDDRNAGSEPGGAKSTALITRDLLGGATLETESLELDLDLQVPSG 60

Query: 61  WEKRLDLKSGKVYIQRSQTPDSPLNSDSKQRQMKNQTESKSQDLNFPPSPSKRTLNLFNE 120
           WEKRLDLKSGKVY+QR    +SP +S S  R   NQT +K QDLNFPPSPSKRTLNLF+E
Sbjct: 61  WEKRLDLKSGKVYLQRCNPSNSP-SSSSDYRHQTNQTVAKLQDLNFPPSPSKRTLNLFDE 120

Query: 121 TSLGLNLT---SSTNYASVCTLDKVKSALERADKELIKKRS-TVWKSPSSP------SAA 180
            +L L L    SS++Y SVCTLD VKSALERA++EL +KRS ++WKS  SP      S  
Sbjct: 121 GNLELKLVASPSSSSYRSVCTLDSVKSALERAERELGRKRSASLWKSSMSPPYSSSSSCI 180

Query: 181 KEIQEEEAAESRKSAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLASMKKPRIDLNIS 229
           +EIQE    E   + +P A GCPGCLSYVL+ KNNP+CPRCNS VP+  +KKPRIDLNIS
Sbjct: 181 REIQEGGNDEKLGAPSPAAAGCPGCLSYVLIMKNNPKCPRCNSAVPMPMVKKPRIDLNIS 240

[Close]
BLAST of Cp4.1LG04g02250 vs. NCBI nr
Match: gi|802742752|ref|XP_012087377.1| (PREDICTED: uncharacterized protein LOC105646181 [Jatropha curcas])

HSP 1 Score: 244.2 bits (622), Expect = 2.2e-61
Identity = 147/252 (58.33%), Postives = 182/252 (72.22%), Query Frame = 1 

Query: 1   MAAQVSSLIRVLAGYEDQD---NRTALEESTPLTTRDLLG-------QSSNLADSQELDL 60
           MAA VS+L R L+GY+D     N +   +ST L TRDLLG        S+   DSQELDL
Sbjct: 1   MAADVSTLFRALSGYKDDRTVANESVGGKSTALITRDLLGGSGVDGYASTIKDDSQELDL 60

Query: 61  DLQVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKQRQMKNQTESKSQDLNFPPSPSKR 120
           DLQVP+GWEKRLDLKSGKVY+QR  + +SP +S  ++ ++ NQT SK QDLNFPPSPSK 
Sbjct: 61  DLQVPTGWEKRLDLKSGKVYLQRCNSSNSPSSSSDQRHKITNQTVSKLQDLNFPPSPSKI 120

Query: 121 TLNLFNETSLGLNL-------TSSTNYASVCTLDKVKSALERADKELIKKRS-TVWKSPS 180
           TLNLF+E++L L L       TSS  Y SV TLDKVKSALERA+KE I+KRS T+WKS  
Sbjct: 121 TLNLFDESNLELKLVSSPSSSTSSGKYLSVHTLDKVKSALERAEKEPIRKRSTTLWKSRL 180

Query: 181 SP------SAAKEIQEEEAAESRKSAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLAS 229
           SP      S+ K++ ++E  E + +++P+A GCPGCLSYVL+ KNNP+CPRC++VVPL  
Sbjct: 181 SPSYSSSSSSMKDLPDDE-DEEKLTSSPVAAGCPGCLSYVLIMKNNPKCPRCSTVVPLPM 240

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g02250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG04g02250 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3J9_CUCSA1.6e-9883.13Uncharacterized protein OS=Cucumis sativus GN=Csa_7G238440 PE=4 SV=1[more]
B9H627_POPTR1.3e-6361.38Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s09960g PE=4 SV=1[more]
B9HGV7_POPTR6.2e-6360.58Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s08220g PE=4 SV=2[more]
A0A067JZX2_JATCU1.5e-6158.33Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22624 PE=4 SV=1[more]
A0A072V8W9_MEDTR3.8e-6058.17Uncharacterized protein OS=Medicago truncatula GN=MTR_2g066700 PE=4 SV=1[more]
BLAST of Cp4.1LG04g02250 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G79160.11.7e-4348.19 unknown protein[more]
AT1G16500.19.3e-4244.65 unknown protein[more]
BLAST of Cp4.1LG04g02250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449444140|ref|XP_004139833.1|2.3e-9883.13PREDICTED: uncharacterized protein LOC101214550 [Cucumis sativus][more]
gi|659092547|ref|XP_008447115.1|2.3e-9883.13PREDICTED: uncharacterized protein LOC103489640 [Cucumis melo][more]
gi|224081429|ref|XP_002306406.1|1.8e-6361.38hypothetical protein POPTR_0005s09960g [Populus trichocarpa][more]
gi|566180223|ref|XP_002310095.2|9.0e-6360.58hypothetical protein POPTR_0007s08220g [Populus trichocarpa][more]
gi|802742752|ref|XP_012087377.1|2.2e-6158.33PREDICTED: uncharacterized protein LOC105646181 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g02250.1Cp4.1LG04g02250.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33177FAMILY NOT NAMEDcoord: 2..228
score: 2.2
NoneNo IPR availablePANTHERPTHR33177:SF6F3O9.30coord: 2..228
score: 2.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g02250Cucsa.118430Cucumber (Gy14) v1cgycpeB0297
Cp4.1LG04g02250Cucsa.239760Cucumber (Gy14) v1cgycpeB0636
Cp4.1LG04g02250CmaCh20G002770Cucurbita maxima (Rimu)cmacpeB573
Cp4.1LG04g02250CmaCh02G000100Cucurbita maxima (Rimu)cmacpeB642
Cp4.1LG04g02250CmaCh11G019720Cucurbita maxima (Rimu)cmacpeB148
Cp4.1LG04g02250CmaCh19G011020Cucurbita maxima (Rimu)cmacpeB537
Cp4.1LG04g02250CmoCh19G011290Cucurbita moschata (Rifu)cmocpeB492
Cp4.1LG04g02250CmoCh20G003000Cucurbita moschata (Rifu)cmocpeB524
Cp4.1LG04g02250CmoCh11G020600Cucurbita moschata (Rifu)cmocpeB126
Cp4.1LG04g02250Lsi10G015210Bottle gourd (USVL1VR-Ls)cpelsiB523
Cp4.1LG04g02250CsGy6G011290Cucumber (Gy14) v2cgybcpeB843
Cp4.1LG04g02250CsGy7G010220Cucumber (Gy14) v2cgybcpeB965
Cp4.1LG04g02250Carg03428Silver-seed gourdcarcpeB0474
Cp4.1LG04g02250Carg04680Silver-seed gourdcarcpeB0547
Cp4.1LG04g02250Carg15661Silver-seed gourdcarcpeB0754
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG04g02250Cp4.1LG15g08960Cucurbita pepo (Zucchini)cpecpeB267
Cp4.1LG04g02250Cp4.1LG16g07150Cucurbita pepo (Zucchini)cpecpeB306
Cp4.1LG04g02250Cp4.1LG05g15750Cucurbita pepo (Zucchini)cpecpeB492
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g02250Melon (DHL92) v3.6.1cpemedB707
Cp4.1LG04g02250Melon (DHL92) v3.6.1cpemedB723
Cp4.1LG04g02250Cucumber (Chinese Long) v3cpecucB0862
Cp4.1LG04g02250Cucumber (Chinese Long) v3cpecucB0854
Cp4.1LG04g02250Cucumber (Chinese Long) v3cpecucB0864
Cp4.1LG04g02250Wax gourdcpewgoB0854
Cp4.1LG04g02250Wax gourdcpewgoB0865
Cp4.1LG04g02250Cucurbita moschata (Rifu)cmocpeB592
Cp4.1LG04g02250Wild cucumber (PI 183967)cpecpiB693
Cp4.1LG04g02250Wild cucumber (PI 183967)cpecpiB690
Cp4.1LG04g02250Cucumber (Chinese Long) v2cpecuB688
Cp4.1LG04g02250Cucumber (Chinese Long) v2cpecuB691
Cp4.1LG04g02250Bottle gourd (USVL1VR-Ls)cpelsiB531
Cp4.1LG04g02250Watermelon (Charleston Gray)cpewcgB574
Cp4.1LG04g02250Watermelon (Charleston Gray)cpewcgB592
Cp4.1LG04g02250Watermelon (97103) v1cpewmB626
Cp4.1LG04g02250Watermelon (97103) v1cpewmB668
Cp4.1LG04g02250Melon (DHL92) v3.5.1cpemeB598
Cp4.1LG04g02250Melon (DHL92) v3.5.1cpemeB611
Cp4.1LG04g02250Cucumber (Gy14) v2cgybcpeB839