CmoCh19G011290 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh19G011290
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionFilamentous hemagglutinin transporter fhaC
LocationCmo_Chr19 : 9563755 .. 9565123 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGCACAAGTTACAACCCCCCAAACCACTCGCCCACCCACCCACCTCTCTGCTTCCTCTCTCTCTCTCTCTATCCTTCTCGTTTTTATCAGAACAAAAAACAAAACCCCTTCACAGGCCCTTCCGTTTCGTTTCCCTATAAAGCTCCAGAAAATGGCTGCCCAAGTCAGCACTCTGATTCGGGTACTCGCCGGCGGCGGAGGCGGAGGCTACAACGACGAAGATAACCGGACGCCCCTCGGTAATGGCCAGGAACCAACGCCTCTCGTTACTCGCGATTTGCTCGGCCAATCTTCCAACCTCGCCGCCTCTCAGGAATTGGACCTCGATTTGCAGGTTCCCTCCGGCTGGGAAAAAAGACTCGACTTGAAGGTTCCTTCTTTTAAAATCTTCTTTTCTTTTGTTTCATAATTTCAATTGCTTTCTGGAATTCAAGAACTCTATGATTCCCTTCACAAAAAAATTGTATTGTGATATGGGTTTTGTTTATGAAGTTCTGGAATTTTTTTTTCCTTCCCTTTTAATGACATTAATTGCTGCTTGGTACTCCTGAGTAATTACCCCCATCGTAGCCCTATTCAATTACCCCTCTCCTCTGAATTCATTAAATTTCGTTCCTATTTTTTAATTTTTTAATAAAAAGTAATTTCATTTCATTTGTGTTTGCAGTCGGGGAAAGTTTACATACAGAGAAGTCAAACACCGGATTCTCCTCTGAATTCAGATTCGAAACACCACCAAATGACAAACCAAACAGAGTCCAAATTCCAGGACTTGAATTTCCCCCCATCTCCTTCAAAACGAACATTAAATCTCTTCAATGAAACCAGCTTGGATTTGAAACTGACGTCGTCGCCGTCTCCGTCACCGTCTCCGTCGACCAATTACGCCAGTGTTTGCACTCTGGATAAGGTGAAATCCGCTCTGGAAAGGGCCGACAAGGAGCTCGTTAAAAAAAGGTCTTCGCTTTGGAAATCGACGTCGTCGCCGTCGTACTCGTCATCGTCGTCTGCGGCGGCGAAGGAAATTCAAGAAGAAGAAGAAGCGGTGGAAAACAGAAACGAGGCGGCAGTTTTGGCGGCGCCGATGGCGGTGGGTTGCCGTGGATGTTTATCTTATGTATTGGTAACGAAAAACAACCCGAGATGTCCTCGTTGCAATTCTGTTGTTCCGTTGGCGAGCATGAAGAAACCTCGGATTGATCTAAACATGTCTATATAAAATATCCAAAGGGAAAATTAAGAAATTTCCCCCATGGCCCTCTCCCTGGATCTTGTGTTTTGGGTATATGTAAAATGGACATATTCACACAAAATTATGGTTTCCATTATTCCATTCTCAATTCCTCCTCTGATGTCAAATTATTCAAA

mRNA sequence

CCGCACAAGTTACAACCCCCCAAACCACTCGCCCACCCACCCACCTCTCTGCTTCCTCTCTCTCTCTCTCTATCCTTCTCGTTTTTATCAGAACAAAAAACAAAACCCCTTCACAGGCCCTTCCGTTTCGTTTCCCTATAAAGCTCCAGAAAATGGCTGCCCAAGTCAGCACTCTGATTCGGGTACTCGCCGGCGGCGGAGGCGGAGGCTACAACGACGAAGATAACCGGACGCCCCTCGGTAATGGCCAGGAACCAACGCCTCTCGTTACTCGCGATTTGCTCGGCCAATCTTCCAACCTCGCCGCCTCTCAGGAATTGGACCTCGATTTGCAGGTTCCCTCCGGCTGGGAAAAAAGACTCGACTTGAAGTCGGGGAAAGTTTACATACAGAGAAGTCAAACACCGGATTCTCCTCTGAATTCAGATTCGAAACACCACCAAATGACAAACCAAACAGAGTCCAAATTCCAGGACTTGAATTTCCCCCCATCTCCTTCAAAACGAACATTAAATCTCTTCAATGAAACCAGCTTGGATTTGAAACTGACGTCGTCGCCGTCTCCGTCACCGTCTCCGTCGACCAATTACGCCAGTGTTTGCACTCTGGATAAGGTGAAATCCGCTCTGGAAAGGGCCGACAAGGAGCTCGTTAAAAAAAGGTCTTCGCTTTGGAAATCGACGTCGTCGCCGTCGTACTCGTCATCGTCGTCTGCGGCGGCGAAGGAAATTCAAGAAGAAGAAGAAGCGGTGGAAAACAGAAACGAGGCGGCAGTTTTGGCGGCGCCGATGGCGGTGGGTTGCCGTGGATGTTTATCTTATGTATTGGTAACGAAAAACAACCCGAGATGTCCTCGTTGCAATTCTGTTGTTCCGTTGGCGAGCATGAAGAAACCTCGGATTGATCTAAACATGTCTATATAAAATATCCAAAGGGAAAATTAAGAAATTTCCCCCATGGCCCTCTCCCTGGATCTTGTGTTTTGGGTATATGTAAAATGGACATATTCACACAAAATTATGGTTTCCATTATTCCATTCTCAATTCCTCCTCTGATGTCAAATTATTCAAA

Coding sequence (CDS)

ATGGCTGCCCAAGTCAGCACTCTGATTCGGGTACTCGCCGGCGGCGGAGGCGGAGGCTACAACGACGAAGATAACCGGACGCCCCTCGGTAATGGCCAGGAACCAACGCCTCTCGTTACTCGCGATTTGCTCGGCCAATCTTCCAACCTCGCCGCCTCTCAGGAATTGGACCTCGATTTGCAGGTTCCCTCCGGCTGGGAAAAAAGACTCGACTTGAAGTCGGGGAAAGTTTACATACAGAGAAGTCAAACACCGGATTCTCCTCTGAATTCAGATTCGAAACACCACCAAATGACAAACCAAACAGAGTCCAAATTCCAGGACTTGAATTTCCCCCCATCTCCTTCAAAACGAACATTAAATCTCTTCAATGAAACCAGCTTGGATTTGAAACTGACGTCGTCGCCGTCTCCGTCACCGTCTCCGTCGACCAATTACGCCAGTGTTTGCACTCTGGATAAGGTGAAATCCGCTCTGGAAAGGGCCGACAAGGAGCTCGTTAAAAAAAGGTCTTCGCTTTGGAAATCGACGTCGTCGCCGTCGTACTCGTCATCGTCGTCTGCGGCGGCGAAGGAAATTCAAGAAGAAGAAGAAGCGGTGGAAAACAGAAACGAGGCGGCAGTTTTGGCGGCGCCGATGGCGGTGGGTTGCCGTGGATGTTTATCTTATGTATTGGTAACGAAAAACAACCCGAGATGTCCTCGTTGCAATTCTGTTGTTCCGTTGGCGAGCATGAAGAAACCTCGGATTGATCTAAACATGTCTATATAA
Homology
[Close]
BLAST of CmoCh19G011290 vs. TrEMBL
Match: A0A0A0K3J9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G238440 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 4.8e-104
Identity = 217/258 (84.11%), Postives = 225/258 (87.21%), Query Frame = 1 

Query: 1   MAAQVSTLIRVLAGGGGGGYNDEDNRTPLGNGQEPTPLVTRDLLGQSSNLAASQELDLDL 60
           MAA+VS+LIRVLAG     Y D+DNRT LGNGQ+ T LVTRDLLGQSSNL  SQELDLDL
Sbjct: 1   MAAEVSSLIRVLAG-----YKDDDNRTALGNGQDSTALVTRDLLGQSSNLTDSQELDLDL 60

Query: 61  QVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKHHQMTNQTESKFQDLNFPPSPSKRTL 120
           QVP+GWEKRLDLKSGKVYIQRSQTPDSPLNSDSK  QM NQTESKFQDLNFPPSPSKRTL
Sbjct: 61  QVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKQIQMINQTESKFQDLNFPPSPSKRTL 120

Query: 121 NLFNETSLDLKLTSSPSPSPSPSTNYASVCTLDKVKSALERADKELVKKRSSLWKSTSSP 180
           NLFNETSLDLKLTSSPS     STNYASVCTLDKVKSALERADKELVKKRSSLWKS SSP
Sbjct: 121 NLFNETSLDLKLTSSPS-----STNYASVCTLDKVKSALERADKELVKKRSSLWKSASSP 180

Query: 181 SYSSSSSAAA--KEIQEEEEAVENRNEAAVLAAPMAVGCRGCLSYVLVTKNNPRCPRCNS 240
           SYSSSSS+AA  KEIQ EEEA E RN     AAPMAVGC GCLSYVLV KNNPRCPRCNS
Sbjct: 181 SYSSSSSSAAAGKEIQ-EEEAAEIRNS----AAPMAVGCPGCLSYVLVMKNNPRCPRCNS 240

Query: 241 VVPLASMKKPRIDLNMSI 257
           VVPL ++KKPRIDLNMSI
Sbjct: 241 VVPLPTIKKPRIDLNMSI 243

[Close]
BLAST of CmoCh19G011290 vs. TrEMBL
Match: B9HGV7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s08220g PE=4 SV=2)

HSP 1 Score: 264.2 bits (674), Expect = 1.6e-67
Identity = 154/257 (59.92%), Postives = 186/257 (72.37%), Query Frame = 1 

Query: 1   MAAQVSTLIRVLAGGGGGGYNDEDNRTPLGNGQEPTPLVTRDLLGQSSNLAASQELDLDL 60
           MAA+VS+L+R+ +G     Y D+ N      G + T L+TRDLLG ++    S ELDLDL
Sbjct: 1   MAAEVSSLVRLFSG-----YKDDRNAGSEPGGAKSTALITRDLLGGATLETESLELDLDL 60

Query: 61  QVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKHHQMTNQTESKFQDLNFPPSPSKRTL 120
           QVPSGWEKRLDLKSGKVY+QR    +SP +S    HQ TNQT +K QDLNFPPSPSKRTL
Sbjct: 61  QVPSGWEKRLDLKSGKVYLQRCNPSNSPSSSSDYRHQ-TNQTVAKLQDLNFPPSPSKRTL 120

Query: 121 NLFNETSLDLKLTSSPSPSPSPSTNYASVCTLDKVKSALERADKELVKKRS-SLWKSTSS 180
           NLF+E +L+LKL +SPS     S++Y SVCTLD VKSALERA++EL +KRS SLWKS+ S
Sbjct: 121 NLFDEGNLELKLVASPS-----SSSYRSVCTLDSVKSALERAERELGRKRSASLWKSSMS 180

Query: 181 PSYSSSSSAAAKEIQEEEEAVENRNEAAVLAAPMAVGCRGCLSYVLVTKNNPRCPRCNSV 240
           P YSSSSS   +EIQE        +E     +P A GC GCLSYVL+ KNNP+CPRCNS 
Sbjct: 181 PPYSSSSS-CIREIQE-----GGNDEKLGAPSPAAAGCPGCLSYVLIMKNNPKCPRCNSA 240

Query: 241 VPLASMKKPRIDLNMSI 257
           VP+  +KKPRIDLN+SI
Sbjct: 241 VPMPMVKKPRIDLNISI 240

[Close]
BLAST of CmoCh19G011290 vs. TrEMBL
Match: A0A067JZX2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22624 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 6.1e-67
Identity = 157/264 (59.47%), Postives = 193/264 (73.11%), Query Frame = 1 

Query: 1   MAAQVSTLIRVLAGGGGGGYNDEDNRTPLGNGQEPTPLVTRDLLGQSS--NLAA-----S 60
           MAA VSTL R L+G     Y D+        G + T L+TRDLLG S     A+     S
Sbjct: 1   MAADVSTLFRALSG-----YKDDRTVANESVGGKSTALITRDLLGGSGVDGYASTIKDDS 60

Query: 61  QELDLDLQVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKHHQMTNQTESKFQDLNFPP 120
           QELDLDLQVP+GWEKRLDLKSGKVY+QR  + +SP +S  + H++TNQT SK QDLNFPP
Sbjct: 61  QELDLDLQVPTGWEKRLDLKSGKVYLQRCNSSNSPSSSSDQRHKITNQTVSKLQDLNFPP 120

Query: 121 SPSKRTLNLFNETSLDLKLTSSPSPSPSPSTNYASVCTLDKVKSALERADKELVKKRS-S 180
           SPSK TLNLF+E++L+LKL SSPS S S S  Y SV TLDKVKSALERA+KE ++KRS +
Sbjct: 121 SPSKITLNLFDESNLELKLVSSPSSSTS-SGKYLSVHTLDKVKSALERAEKEPIRKRSTT 180

Query: 181 LWKSTSSPSYSSSSSAAAKEIQEEEEAVENRNEAAVLAAPMAVGCRGCLSYVLVTKNNPR 240
           LWKS  SPSYSSSSS + K++ ++E+      E  + ++P+A GC GCLSYVL+ KNNP+
Sbjct: 181 LWKSRLSPSYSSSSS-SMKDLPDDED------EEKLTSSPVAAGCPGCLSYVLIMKNNPK 240

Query: 241 CPRCNSVVPLASMKKPRIDLNMSI 257
           CPRC++VVPL   KKPRIDLN+SI
Sbjct: 241 CPRCSTVVPLPMAKKPRIDLNISI 251

[Close]
BLAST of CmoCh19G011290 vs. TrEMBL
Match: B9H627_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s09960g PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 5.2e-66
Identity = 156/262 (59.54%), Postives = 190/262 (72.52%), Query Frame = 1 

Query: 1   MAAQVSTLIRVLAGGGGGGYNDEDNRTPLGNGQEPTPLVTRDLLGQS-----SNLAASQE 60
           MAA+VS+L+R+L+G     Y D+ N      G + T L+TRDLLG       S  + SQE
Sbjct: 1   MAAEVSSLVRLLSG-----YTDDRNVVSEPGGAKSTTLITRDLLGGGGGGGDSVESESQE 60

Query: 61  LDLDLQVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKHHQMTNQTESKFQDLNFPPSP 120
           LDLDLQVPSGWEKRLDLKSGKVY+QR  +  SP +S S +   TNQT +K QDLNFPPSP
Sbjct: 61  LDLDLQVPSGWEKRLDLKSGKVYLQRCNSSSSP-SSSSDYRNQTNQTVAKLQDLNFPPSP 120

Query: 121 SKRTLNLFNETSLDLKLTSSPSPSPSPSTNYASVCTLDKVKSALERADKELVKKRSS-LW 180
           SK TLNLF+E +L+L   SSP      S+NY SVCTLD+VKSALERA+KE  +K+SS LW
Sbjct: 121 SKITLNLFDEGNLELNFVSSPM-----SSNYQSVCTLDRVKSALERAEKEPGRKQSSSLW 180

Query: 181 KSTSSPSYSSSSSAAAKEIQEEEEAVENRNEAAVLAAPMAVGCRGCLSYVLVTKNNPRCP 240
           KS+SSP YSSSSS+  ++IQEEE       E  + A+P+A GC GCLSYVL+TK NPRCP
Sbjct: 181 KSSSSPPYSSSSSSV-RDIQEEEN-----EEKLLEASPVAAGCPGCLSYVLITKINPRCP 240

Query: 241 RCNSVVPLASMKKPRIDLNMSI 257
           RCNSVV + ++KKP IDLN+SI
Sbjct: 241 RCNSVVLMPTVKKPMIDLNISI 245

[Close]
BLAST of CmoCh19G011290 vs. TrEMBL
Match: W9R0C4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016233 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 8.8e-66
Identity = 162/272 (59.56%), Postives = 191/272 (70.22%), Query Frame = 1 

Query: 1   MAAQVSTLIRVLAGGGGGGYNDEDNRTPLGN---GQEPTPLVTRDLLGQSSNLAAS---- 60
           MAA VS+L+RVL+G      +D+   T +GN    +  T L+TRDLLG SS+ ++S    
Sbjct: 1   MAADVSSLVRVLSGYK----DDQRGSTTMGNDSTAERSTALITRDLLGGSSSSSSSSKLV 60

Query: 61  ---QELDLDLQVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKHHQMTNQTESKFQDLN 120
              QELDLDLQVPSGWEKRLDLKSGKVY+QR    +S  +  +KHHQ TN T  K QDLN
Sbjct: 61  SDAQELDLDLQVPSGWEKRLDLKSGKVYLQRCSGTNS-YSDHNKHHQ-TNSTVPKLQDLN 120

Query: 121 FPPSPS-KRTLNLFNETSLDLKLTSSPSPSPSPSTNYASVCTLDKVKSALERADKELVKK 180
           FP S S K  LNLF++TSL+LKL S  S  PS S NY SVCTLDKVKSALERA+KE   K
Sbjct: 121 FPASQSSKMPLNLFDDTSLELKLVSHSSSPPSTSPNYQSVCTLDKVKSALERAEKEPAAK 180

Query: 181 RSS-----LWKSTSSPSYSSSSSAAAKEIQEEEEAVENRNEAAVLAAPMAVGCRGCLSYV 240
           R S     LWKS+ SPSYSSSSS + KE QEEE      ++  V ++P A GC GCLSYV
Sbjct: 181 RRSPSTTTLWKSSPSPSYSSSSS-SMKEAQEEE-----YHDEKVFSSPFAAGCPGCLSYV 240

Query: 241 LVTKNNPRCPRCNSVVPLASMKKPRIDLNMSI 257
           L+ KNNP+CPRCNSV+PL  MKKPRIDLNM+I
Sbjct: 241 LIMKNNPKCPRCNSVIPLPLMKKPRIDLNMTI 260

[Close]
BLAST of CmoCh19G011290 vs. TAIR10
Match: AT1G79160.1 (AT1G79160.1 unknown protein)

HSP 1 Score: 178.3 bits (451), Expect = 5.9e-45
Identity = 119/264 (45.08%), Postives = 158/264 (59.85%), Query Frame = 1 

Query: 1   MAAQVSTLIRVLAGGGGGGYNDEDNRTPLGNGQEPTP-LVTRDLLGQSSNLAA--SQELD 60
           MAA VS+L+R+L+G     Y D+        G + +  L+TRDLLG         S ELD
Sbjct: 5   MAADVSSLVRLLSG-----YKDDRAVVKDSAGAKSSAALMTRDLLGNGRGGGGDRSLELD 64

Query: 61  LDLQVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKHHQMTNQTESKFQDLNFPPSPSK 120
           LDLQVP+G+EKRLDLKSGKVY+QR  +  S   S   +   TNQT   FQDLNFPP    
Sbjct: 65  LDLQVPTGYEKRLDLKSGKVYLQRCNSTSS---SSITNADQTNQTVPTFQDLNFPPPTLN 124

Query: 121 RT--LNLFNETSLDLKLTSSPSPSPSPSTNYASVCTLDKVKSALERADKELVKKRSSLWK 180
            +  LNLF++T+ +LKL  S   S   ++N  SVCTLDKVKSALERA+++      +++K
Sbjct: 125 NSPLLNLFDDTTPELKLLPSSRSSRPNTSNLQSVCTLDKVKSALERAERD-----PAMFK 184

Query: 181 STSSPSYSSSSSAAAKEIQEEEEAVENRNEAAVLAAPMAVGCRGCLSYVLVTKNNPRCPR 240
              SP                ++ V +      +A+P+  GC GCLSYVLV  NNP+CPR
Sbjct: 185 KRQSP----------------DDTVYDHYRTEAVASPVVAGCPGCLSYVLVMMNNPKCPR 239

Query: 241 CNSVVPLAS---MKKPRIDLNMSI 257
           C+++VPL +    KKP+IDLN+SI
Sbjct: 245 CDTIVPLPTNPMKKKPKIDLNISI 239

[Close]
BLAST of CmoCh19G011290 vs. TAIR10
Match: AT1G16500.1 (AT1G16500.1 unknown protein)

HSP 1 Score: 169.1 bits (427), Expect = 3.6e-42
Identity = 109/226 (48.23%), Postives = 138/226 (61.06%), Query Frame = 1 

Query: 53  SQELDLDLQVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKHHQ----MTNQTESKFQD 112
           S ELDLD+QVP+GWEKRLDLKSGKVY+Q+     S  +S   HH      TNQT  +FQD
Sbjct: 56  SLELDLDVQVPNGWEKRLDLKSGKVYLQQQCNSTSSSSSSHHHHHHHEDQTNQTVPRFQD 115

Query: 113 LNFPPS----PSKRTLNLFNE---TSLDLKLTSS------PSP----SPSPSTNY-ASVC 172
           LN PP     P+K  L+LF++   TSL+LKL  S      P P    SP+ S +Y +SVC
Sbjct: 116 LNVPPISDKFPAKPLLSLFDDDDDTSLELKLVPSSISRPLPPPLSSFSPNQSLSYLSSVC 175

Query: 173 TLDKVKSALERADKELVKKRSSLWKSTSSPSYSSSSSAAAKEIQEEEEAVENRNEAAVLA 232
           TLDKVK ALERA+K+  K++S                       E++   +    A V A
Sbjct: 176 TLDKVKLALERAEKDTKKRQSP----------------------EDDGVYDGTASATVAA 235

Query: 233 APMAVGCRGCLSYVLVTKNNPRCPRCNSVVPLASMKKPRIDLNMSI 257
           + +A GC GCLSYV V KNNP+CPRC+S VPL +MKKP+IDLN+S+
Sbjct: 236 SQVAAGCPGCLSYVFVAKNNPKCPRCHSFVPLPAMKKPKIDLNISM 259

[Close]
BLAST of CmoCh19G011290 vs. NCBI nr
Match: gi|659092547|ref|XP_008447115.1| (PREDICTED: uncharacterized protein LOC103489640 [Cucumis melo])

HSP 1 Score: 388.7 bits (997), Expect = 8.1e-105
Identity = 218/257 (84.82%), Postives = 226/257 (87.94%), Query Frame = 1 

Query: 1   MAAQVSTLIRVLAGGGGGGYNDEDNRTPLGNGQEPTPLVTRDLLGQSSNLAASQELDLDL 60
           MAA+VS+LIRVLAG     Y ++DNRT LGNGQ+ T LVTRDLLGQSSNL  SQELDLDL
Sbjct: 1   MAAEVSSLIRVLAG-----YKEDDNRTALGNGQDSTALVTRDLLGQSSNLTDSQELDLDL 60

Query: 61  QVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKHHQMTNQTESKFQDLNFPPSPSKRTL 120
           QVP+GWEKRLDLKSGKVYIQRSQTPDSPLNSDSK  QM NQTESKFQDLNFPPSPSKRTL
Sbjct: 61  QVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKQIQMINQTESKFQDLNFPPSPSKRTL 120

Query: 121 NLFNETSLDLKLTSSPSPSPSPSTNYASVCTLDKVKSALERADKELVKKRSSLWKSTSSP 180
           NLFNETSLDLKLTS    SPSPSTNYASVCTLDKVKSALERADKELVKKRSSLWKS SSP
Sbjct: 121 NLFNETSLDLKLTS----SPSPSTNYASVCTLDKVKSALERADKELVKKRSSLWKSASSP 180

Query: 181 SY-SSSSSAAAKEIQEEEEAVENRNEAAVLAAPMAVGCRGCLSYVLVTKNNPRCPRCNSV 240
           SY SSSSSAAAKEIQ EEEA E RN     AAPMAVGC GCLSYVLV KNNPRCPRCNSV
Sbjct: 181 SYSSSSSSAAAKEIQ-EEEAAEIRNS----AAPMAVGCPGCLSYVLVMKNNPRCPRCNSV 240

Query: 241 VPLASMKKPRIDLNMSI 257
           VPL ++KKPRIDLNMSI
Sbjct: 241 VPLPTIKKPRIDLNMSI 243

[Close]
BLAST of CmoCh19G011290 vs. NCBI nr
Match: gi|449444140|ref|XP_004139833.1| (PREDICTED: uncharacterized protein LOC101214550 [Cucumis sativus])

HSP 1 Score: 385.6 bits (989), Expect = 6.9e-104
Identity = 217/258 (84.11%), Postives = 225/258 (87.21%), Query Frame = 1 

Query: 1   MAAQVSTLIRVLAGGGGGGYNDEDNRTPLGNGQEPTPLVTRDLLGQSSNLAASQELDLDL 60
           MAA+VS+LIRVLAG     Y D+DNRT LGNGQ+ T LVTRDLLGQSSNL  SQELDLDL
Sbjct: 1   MAAEVSSLIRVLAG-----YKDDDNRTALGNGQDSTALVTRDLLGQSSNLTDSQELDLDL 60

Query: 61  QVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKHHQMTNQTESKFQDLNFPPSPSKRTL 120
           QVP+GWEKRLDLKSGKVYIQRSQTPDSPLNSDSK  QM NQTESKFQDLNFPPSPSKRTL
Sbjct: 61  QVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKQIQMINQTESKFQDLNFPPSPSKRTL 120

Query: 121 NLFNETSLDLKLTSSPSPSPSPSTNYASVCTLDKVKSALERADKELVKKRSSLWKSTSSP 180
           NLFNETSLDLKLTSSPS     STNYASVCTLDKVKSALERADKELVKKRSSLWKS SSP
Sbjct: 121 NLFNETSLDLKLTSSPS-----STNYASVCTLDKVKSALERADKELVKKRSSLWKSASSP 180

Query: 181 SYSSSSSAAA--KEIQEEEEAVENRNEAAVLAAPMAVGCRGCLSYVLVTKNNPRCPRCNS 240
           SYSSSSS+AA  KEIQ EEEA E RN     AAPMAVGC GCLSYVLV KNNPRCPRCNS
Sbjct: 181 SYSSSSSSAAAGKEIQ-EEEAAEIRNS----AAPMAVGCPGCLSYVLVMKNNPRCPRCNS 240

Query: 241 VVPLASMKKPRIDLNMSI 257
           VVPL ++KKPRIDLNMSI
Sbjct: 241 VVPLPTIKKPRIDLNMSI 243

[Close]
BLAST of CmoCh19G011290 vs. NCBI nr
Match: gi|566180223|ref|XP_002310095.2| (hypothetical protein POPTR_0007s08220g [Populus trichocarpa])

HSP 1 Score: 264.2 bits (674), Expect = 2.3e-67
Identity = 154/257 (59.92%), Postives = 186/257 (72.37%), Query Frame = 1 

Query: 1   MAAQVSTLIRVLAGGGGGGYNDEDNRTPLGNGQEPTPLVTRDLLGQSSNLAASQELDLDL 60
           MAA+VS+L+R+ +G     Y D+ N      G + T L+TRDLLG ++    S ELDLDL
Sbjct: 1   MAAEVSSLVRLFSG-----YKDDRNAGSEPGGAKSTALITRDLLGGATLETESLELDLDL 60

Query: 61  QVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKHHQMTNQTESKFQDLNFPPSPSKRTL 120
           QVPSGWEKRLDLKSGKVY+QR    +SP +S    HQ TNQT +K QDLNFPPSPSKRTL
Sbjct: 61  QVPSGWEKRLDLKSGKVYLQRCNPSNSPSSSSDYRHQ-TNQTVAKLQDLNFPPSPSKRTL 120

Query: 121 NLFNETSLDLKLTSSPSPSPSPSTNYASVCTLDKVKSALERADKELVKKRS-SLWKSTSS 180
           NLF+E +L+LKL +SPS     S++Y SVCTLD VKSALERA++EL +KRS SLWKS+ S
Sbjct: 121 NLFDEGNLELKLVASPS-----SSSYRSVCTLDSVKSALERAERELGRKRSASLWKSSMS 180

Query: 181 PSYSSSSSAAAKEIQEEEEAVENRNEAAVLAAPMAVGCRGCLSYVLVTKNNPRCPRCNSV 240
           P YSSSSS   +EIQE        +E     +P A GC GCLSYVL+ KNNP+CPRCNS 
Sbjct: 181 PPYSSSSS-CIREIQE-----GGNDEKLGAPSPAAAGCPGCLSYVLIMKNNPKCPRCNSA 240

Query: 241 VPLASMKKPRIDLNMSI 257
           VP+  +KKPRIDLN+SI
Sbjct: 241 VPMPMVKKPRIDLNISI 240

[Close]
BLAST of CmoCh19G011290 vs. NCBI nr
Match: gi|802742752|ref|XP_012087377.1| (PREDICTED: uncharacterized protein LOC105646181 [Jatropha curcas])

HSP 1 Score: 262.3 bits (669), Expect = 8.8e-67
Identity = 157/264 (59.47%), Postives = 193/264 (73.11%), Query Frame = 1 

Query: 1   MAAQVSTLIRVLAGGGGGGYNDEDNRTPLGNGQEPTPLVTRDLLGQSS--NLAA-----S 60
           MAA VSTL R L+G     Y D+        G + T L+TRDLLG S     A+     S
Sbjct: 1   MAADVSTLFRALSG-----YKDDRTVANESVGGKSTALITRDLLGGSGVDGYASTIKDDS 60

Query: 61  QELDLDLQVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKHHQMTNQTESKFQDLNFPP 120
           QELDLDLQVP+GWEKRLDLKSGKVY+QR  + +SP +S  + H++TNQT SK QDLNFPP
Sbjct: 61  QELDLDLQVPTGWEKRLDLKSGKVYLQRCNSSNSPSSSSDQRHKITNQTVSKLQDLNFPP 120

Query: 121 SPSKRTLNLFNETSLDLKLTSSPSPSPSPSTNYASVCTLDKVKSALERADKELVKKRS-S 180
           SPSK TLNLF+E++L+LKL SSPS S S S  Y SV TLDKVKSALERA+KE ++KRS +
Sbjct: 121 SPSKITLNLFDESNLELKLVSSPSSSTS-SGKYLSVHTLDKVKSALERAEKEPIRKRSTT 180

Query: 181 LWKSTSSPSYSSSSSAAAKEIQEEEEAVENRNEAAVLAAPMAVGCRGCLSYVLVTKNNPR 240
           LWKS  SPSYSSSSS + K++ ++E+      E  + ++P+A GC GCLSYVL+ KNNP+
Sbjct: 181 LWKSRLSPSYSSSSS-SMKDLPDDED------EEKLTSSPVAAGCPGCLSYVLIMKNNPK 240

Query: 241 CPRCNSVVPLASMKKPRIDLNMSI 257
           CPRC++VVPL   KKPRIDLN+SI
Sbjct: 241 CPRCSTVVPLPMAKKPRIDLNISI 251

[Close]
BLAST of CmoCh19G011290 vs. NCBI nr
Match: gi|224081429|ref|XP_002306406.1| (hypothetical protein POPTR_0005s09960g [Populus trichocarpa])

HSP 1 Score: 259.2 bits (661), Expect = 7.4e-66
Identity = 156/262 (59.54%), Postives = 190/262 (72.52%), Query Frame = 1 

Query: 1   MAAQVSTLIRVLAGGGGGGYNDEDNRTPLGNGQEPTPLVTRDLLGQS-----SNLAASQE 60
           MAA+VS+L+R+L+G     Y D+ N      G + T L+TRDLLG       S  + SQE
Sbjct: 1   MAAEVSSLVRLLSG-----YTDDRNVVSEPGGAKSTTLITRDLLGGGGGGGDSVESESQE 60

Query: 61  LDLDLQVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKHHQMTNQTESKFQDLNFPPSP 120
           LDLDLQVPSGWEKRLDLKSGKVY+QR  +  SP +S S +   TNQT +K QDLNFPPSP
Sbjct: 61  LDLDLQVPSGWEKRLDLKSGKVYLQRCNSSSSP-SSSSDYRNQTNQTVAKLQDLNFPPSP 120

Query: 121 SKRTLNLFNETSLDLKLTSSPSPSPSPSTNYASVCTLDKVKSALERADKELVKKRSS-LW 180
           SK TLNLF+E +L+L   SSP      S+NY SVCTLD+VKSALERA+KE  +K+SS LW
Sbjct: 121 SKITLNLFDEGNLELNFVSSPM-----SSNYQSVCTLDRVKSALERAEKEPGRKQSSSLW 180

Query: 181 KSTSSPSYSSSSSAAAKEIQEEEEAVENRNEAAVLAAPMAVGCRGCLSYVLVTKNNPRCP 240
           KS+SSP YSSSSS+  ++IQEEE       E  + A+P+A GC GCLSYVL+TK NPRCP
Sbjct: 181 KSSSSPPYSSSSSSV-RDIQEEEN-----EEKLLEASPVAAGCPGCLSYVLITKINPRCP 240

Query: 241 RCNSVVPLASMKKPRIDLNMSI 257
           RCNSVV + ++KKP IDLN+SI
Sbjct: 241 RCNSVVLMPTVKKPMIDLNISI 245

The following BLAST results are available for this feature:
BLAST of CmoCh19G011290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh19G011290 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3J9_CUCSA4.8e-10484.11Uncharacterized protein OS=Cucumis sativus GN=Csa_7G238440 PE=4 SV=1[more]
B9HGV7_POPTR1.6e-6759.92Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s08220g PE=4 SV=2[more]
A0A067JZX2_JATCU6.1e-6759.47Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22624 PE=4 SV=1[more]
B9H627_POPTR5.2e-6659.54Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s09960g PE=4 SV=1[more]
W9R0C4_9ROSA8.8e-6659.56Uncharacterized protein OS=Morus notabilis GN=L484_016233 PE=4 SV=1[more]
BLAST of CmoCh19G011290 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G79160.15.9e-4545.08 unknown protein[more]
AT1G16500.13.6e-4248.23 unknown protein[more]
BLAST of CmoCh19G011290 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659092547|ref|XP_008447115.1|8.1e-10584.82PREDICTED: uncharacterized protein LOC103489640 [Cucumis melo][more]
gi|449444140|ref|XP_004139833.1|6.9e-10484.11PREDICTED: uncharacterized protein LOC101214550 [Cucumis sativus][more]
gi|566180223|ref|XP_002310095.2|2.3e-6759.92hypothetical protein POPTR_0007s08220g [Populus trichocarpa][more]
gi|802742752|ref|XP_012087377.1|8.8e-6759.47PREDICTED: uncharacterized protein LOC105646181 [Jatropha curcas][more]
gi|224081429|ref|XP_002306406.1|7.4e-6659.54hypothetical protein POPTR_0005s09960g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh19G011290.1CmoCh19G011290.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 152..172
score: -coord: 190..210
scor
NoneNo IPR availablePANTHERPTHR33177FAMILY NOT NAMEDcoord: 2..256
score: 1.7
NoneNo IPR availablePANTHERPTHR33177:SF6F3O9.30coord: 2..256
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh19G011290Cucsa.118430Cucumber (Gy14) v1cgycmoB0295
CmoCh19G011290Cucsa.239760Cucumber (Gy14) v1cgycmoB0666
CmoCh19G011290CmaCh19G011020Cucurbita maxima (Rimu)cmacmoB508
CmoCh19G011290CmaCh20G002770Cucurbita maxima (Rimu)cmacmoB546
CmoCh19G011290CmaCh02G000100Cucurbita maxima (Rimu)cmacmoB601
CmoCh19G011290Cla013462Watermelon (97103) v1cmowmB493
CmoCh19G011290Cla005499Watermelon (97103) v1cmowmB463
CmoCh19G011290Csa6G137580Cucumber (Chinese Long) v2cmocuB514
CmoCh19G011290Csa7G238440Cucumber (Chinese Long) v2cmocuB520
CmoCh19G011290MELO3C019643Melon (DHL92) v3.5.1cmomeB444
CmoCh19G011290MELO3C012614Melon (DHL92) v3.5.1cmomeB455
CmoCh19G011290ClCG09G022660Watermelon (Charleston Gray)cmowcgB438
CmoCh19G011290ClCG02G018610Watermelon (Charleston Gray)cmowcgB457
CmoCh19G011290CSPI06G11170Wild cucumber (PI 183967)cmocpiB521
CmoCh19G011290CSPI07G10860Wild cucumber (PI 183967)cmocpiB526
CmoCh19G011290Lsi11G016080Bottle gourd (USVL1VR-Ls)cmolsiB459
CmoCh19G011290Lsi10G015210Bottle gourd (USVL1VR-Ls)cmolsiB456
CmoCh19G011290Cp4.1LG15g08960Cucurbita pepo (Zucchini)cmocpeB481
CmoCh19G011290Cp4.1LG16g07020Cucurbita pepo (Zucchini)cmocpeB485
CmoCh19G011290Cp4.1LG04g02250Cucurbita pepo (Zucchini)cmocpeB492
CmoCh19G011290Cp4.1LG05g15750Cucurbita pepo (Zucchini)cmocpeB502
CmoCh19G011290MELO3C019643.2Melon (DHL92) v3.6.1cmomedB511
CmoCh19G011290MELO3C012614.2Melon (DHL92) v3.6.1cmomedB524
CmoCh19G011290CsaV3_7G022850Cucumber (Chinese Long) v3cmocucB0624
CmoCh19G011290CsaV3_6G013590Cucumber (Chinese Long) v3cmocucB0618
CmoCh19G011290Cla97C02G044500Watermelon (97103) v2cmowmbB508
CmoCh19G011290Cla97C09G184220Watermelon (97103) v2cmowmbB528
CmoCh19G011290Bhi10G000740Wax gourdcmowgoB0664
CmoCh19G011290Bhi05G001736Wax gourdcmowgoB0655
CmoCh19G011290CsGy7G010220Cucumber (Gy14) v2cgybcmoB929
CmoCh19G011290CsGy6G011290Cucumber (Gy14) v2cgybcmoB762
CmoCh19G011290Carg03428Silver-seed gourdcarcmoB0463
CmoCh19G011290Carg15661Silver-seed gourdcarcmoB0723
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh19G011290CmoCh20G003000Cucurbita moschata (Rifu)cmocmoB380
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh19G011290Silver-seed gourdcarcmoB0532
CmoCh19G011290Cucurbita moschata (Rifu)cmocmoB108
CmoCh19G011290Cucurbita maxima (Rimu)cmacmoB142