Cp4.1LG04g02240 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g02240
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBnaA01g30280D protein
LocationCp4.1LG04 : 7914431 .. 7915045 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGATAACAACAACAAATCCTTATCAATCATGGAATCAAAACCTTCACACCCTCTTCACCAAATTGCCAAAACCCCAACCCACAAACTTCTTCTCAAGCAGTGGCTCAAGGAGGAAGAACTAATCTTCGGCAGAGTCTCTCTCAAGGAAACCCAAATCGATTCGGTTCGAAAGGAAATCACTATGCTTCACATTTTCTTCTTCGTCTTCCACTCCACATCTATACTCCTCCTCTTCAACGCCTCAGCCAAGGACTTCAACGGCGCAGCCTGCAACAGATCCTGGATTCCCTCCATTTGTTCTCTCTTATTCTCTCTGGGCATCATTTGGGCGGTCAGATACAAGACTGATCTCGAGGCCCATTTGGAGAAATTGTTAGAAAGGGAAAAAGAAGATAGAAATTTGCTGTCCAAGTGTGTTGAAGAGTTGAAGCGGAAAGGGGTTGAATTTGATTTGTTGAAGGAGGTGGATGCGCTGCGGAGGGCGAAGAGCTTGCGGGTTGAAAGTAAGGCTGTGAGAAAATGGTCTTCGAGGGATTTCATGACTCTGTTTTTCTTCTCTGTTTCGTGTATGTTTCTTGGGATTATTAGGATTGTTCTATGTGATAAGTGA

mRNA sequence

ATGAACGATAACAACAACAAATCCTTATCAATCATGGAATCAAAACCTTCACACCCTCTTCACCAAATTGCCAAAACCCCAACCCACAAACTTCTTCTCAAGCAGTGGCTCAAGGAGGAAGAACTAATCTTCGGCAGAGTCTCTCTCAAGGAAACCCAAATCGATTCGGTTCGAAAGGAAATCACTATGCTTCACATTTTCTTCTTCGTCTTCCACTCCACATCTATACTCCTCCTCTTCAACGCCTCAGCCAAGGACTTCAACGGCGCAGCCTGCAACAGATCCTGGATTCCCTCCATTTGTTCTCTCTTATTCTCTCTGGGCATCATTTGGGCGGTCAGATACAAGACTGATCTCGAGGCCCATTTGGAGAAATTGTTAGAAAGGGAAAAAGAAGATAGAAATTTGCTGTCCAAGTGTGTTGAAGAGTTGAAGCGGAAAGGGGTTGAATTTGATTTGTTGAAGGAGGTGGATGCGCTGCGGAGGGCGAAGAGCTTGCGGGTTGAAAGTAAGGCTGTGAGAAAATGGTCTTCGAGGGATTTCATGACTCTGTTTTTCTTCTCTGTTTCGTGTATGTTTCTTGGGATTATTAGGATTGTTCTATGTGATAAGTGA

Coding sequence (CDS)

ATGAACGATAACAACAACAAATCCTTATCAATCATGGAATCAAAACCTTCACACCCTCTTCACCAAATTGCCAAAACCCCAACCCACAAACTTCTTCTCAAGCAGTGGCTCAAGGAGGAAGAACTAATCTTCGGCAGAGTCTCTCTCAAGGAAACCCAAATCGATTCGGTTCGAAAGGAAATCACTATGCTTCACATTTTCTTCTTCGTCTTCCACTCCACATCTATACTCCTCCTCTTCAACGCCTCAGCCAAGGACTTCAACGGCGCAGCCTGCAACAGATCCTGGATTCCCTCCATTTGTTCTCTCTTATTCTCTCTGGGCATCATTTGGGCGGTCAGATACAAGACTGATCTCGAGGCCCATTTGGAGAAATTGTTAGAAAGGGAAAAAGAAGATAGAAATTTGCTGTCCAAGTGTGTTGAAGAGTTGAAGCGGAAAGGGGTTGAATTTGATTTGTTGAAGGAGGTGGATGCGCTGCGGAGGGCGAAGAGCTTGCGGGTTGAAAGTAAGGCTGTGAGAAAATGGTCTTCGAGGGATTTCATGACTCTGTTTTTCTTCTCTGTTTCGTGTATGTTTCTTGGGATTATTAGGATTGTTCTATGTGATAAGTGA

Protein sequence

MNDNNNKSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSICSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIVLCDK
Homology
[Close]
BLAST of Cp4.1LG04g02240 vs. TrEMBL
Match: A0A0A0K424_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G237880 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.4e-98
Identity = 183/203 (90.15%), Postives = 199/203 (98.03%), Query Frame = 1 

Query: 1   MNDNNNKSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKE 60
           M+D+NNK+LS+ME KPSHPLHQIA+TPTHKLLLKQWLKEEELIFGR+SLKETQIDSVRKE
Sbjct: 1   MDDSNNKALSLMEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKE 60

Query: 61  ITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSICSLLFSLGIIWAVRYKTDLE 120
           ITMLHIFFFVFHST+ILLLFNAS KDF+G AC RSWIPS+CSLLFSLGIIWAVRYKTD+E
Sbjct: 61  ITMLHIFFFVFHSTAILLLFNASTKDFHGVACKRSWIPSLCSLLFSLGIIWAVRYKTDVE 120

Query: 121 AHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRD 180
           AHLEKLLEREKEDRNLLSKCV+ELKRKG+EFDLLKEVDALRRAKSLRVE+KAVRKWSSRD
Sbjct: 121 AHLEKLLEREKEDRNLLSKCVDELKRKGIEFDLLKEVDALRRAKSLRVEAKAVRKWSSRD 180

Query: 181 FMTLFFFSVSCMFLGIIRIVLCD 204
           F+TLFFFSVSCMFLGIIR+VLC+
Sbjct: 181 FITLFFFSVSCMFLGIIRVVLCN 203

[Close]
BLAST of Cp4.1LG04g02240 vs. TrEMBL
Match: A0A061FAX1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_032572 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 5.4e-82
Identity = 157/193 (81.35%), Postives = 177/193 (91.71%), Query Frame = 1 

Query: 10  SIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFF 69
           SIMESK  HPLHQIA+TPTH+LLLKQW+KEEELIF R+SLKETQIDSVRKEIT L+IFFF
Sbjct: 9   SIMESKQPHPLHQIAETPTHRLLLKQWVKEEELIFNRISLKETQIDSVRKEITQLYIFFF 68

Query: 70  VFHSTSILLLFNASAKDFNGAACNRSWIPSICSLLFSLGIIWAVRYKTDLEAHLEKLLER 129
           +FHS S+LLLFN+S+KD    AC+RSWIPS+CSLL S+GI WAVRYKTD+E HLEKLLER
Sbjct: 69  LFHSISLLLLFNSSSKDPPTGACHRSWIPSLCSLLCSMGITWAVRYKTDVEGHLEKLLER 128

Query: 130 EKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSV 189
           EKED  LL+KCVEELK+KGVEFDLLKEVDALRRAKSLRVE+KAVRKWS+RDF+TLFFFSV
Sbjct: 129 EKEDGKLLAKCVEELKKKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSARDFVTLFFFSV 188

Query: 190 SCMFLGIIRIVLC 203
           SCM LG+ RI+LC
Sbjct: 189 SCMVLGLTRIILC 201

[Close]
BLAST of Cp4.1LG04g02240 vs. TrEMBL
Match: B9H620_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s09880g PE=4 SV=2)

HSP 1 Score: 307.4 bits (786), Expect = 1.3e-80
Identity = 161/207 (77.78%), Postives = 179/207 (86.47%), Query Frame = 1 

Query: 1   MNDNNNKSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKE 60
           M D +    SIME K  HPLHQIA+TPTHKLLLKQWLKEEELIF R+SLKETQIDSV KE
Sbjct: 1   MADQSANPSSIMEPKQQHPLHQIAETPTHKLLLKQWLKEEELIFNRISLKETQIDSVCKE 60

Query: 61  ITMLHIFFFVFHSTSILLLFNASAKDFNGA----ACNRSWIPSICSLLFSLGIIWAVRYK 120
           IT L+IFFF+FHS S+LLLFNAS+KD  GA    AC RSWIPS+CSLL SLGIIWAVRYK
Sbjct: 61  ITQLYIFFFLFHSISLLLLFNASSKDPFGAKGSEACKRSWIPSLCSLLCSLGIIWAVRYK 120

Query: 121 TDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKW 180
           TD+E HLEKLLEREKED  LL+KCVEELK+KG EFDLLKEVDALRRAKSLRVE+K VRKW
Sbjct: 121 TDVECHLEKLLEREKEDGQLLAKCVEELKKKGGEFDLLKEVDALRRAKSLRVETKVVRKW 180

Query: 181 SSRDFMTLFFFSVSCMFLGIIRIVLCD 204
           S+RDF+TLFFFSVSC+ LG+ RI+LC+
Sbjct: 181 SARDFVTLFFFSVSCLVLGLTRIILCN 207

[Close]
BLAST of Cp4.1LG04g02240 vs. TrEMBL
Match: A0A067JZX7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22629 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 8.6e-80
Identity = 154/195 (78.97%), Postives = 176/195 (90.26%), Query Frame = 1 

Query: 10  SIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFF 69
           SIME KP HPLHQIA+TPTHKLLLKQWLKEEELI  RV+LKETQIDSVRKEIT L+IFFF
Sbjct: 9   SIMEPKPLHPLHQIAETPTHKLLLKQWLKEEELILNRVALKETQIDSVRKEITQLYIFFF 68

Query: 70  VFHSTSILLLFNASAKD--FNGAACNRSWIPSICSLLFSLGIIWAVRYKTDLEAHLEKLL 129
           +FHS S+LLLFNAS++D   +G+ C RSWIPS+CSLL SLGIIWAVRYKTD+E H+EKLL
Sbjct: 69  LFHSISLLLLFNASSRDPPGSGSYCKRSWIPSLCSLLCSLGIIWAVRYKTDVECHMEKLL 128

Query: 130 EREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFF 189
           EREKED  LL+KCVEELK+KG+EFDLLKEVDALRRAKSLRVE+K VRKWS+RDF+TLFFF
Sbjct: 129 EREKEDGKLLAKCVEELKKKGIEFDLLKEVDALRRAKSLRVETKVVRKWSARDFVTLFFF 188

Query: 190 SVSCMFLGIIRIVLC 203
           +VSC+ LG+ RI+ C
Sbjct: 189 TVSCLVLGLTRIISC 203

[Close]
BLAST of Cp4.1LG04g02240 vs. TrEMBL
Match: A0A067FDV4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g045165mg PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 1.9e-79
Identity = 152/203 (74.88%), Postives = 179/203 (88.18%), Query Frame = 1 

Query: 1   MNDNNNKSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKE 60
           M D+     SIME KP HPLHQIA+TPTHKLLLKQWLKEEELI  R++LKETQIDSVRKE
Sbjct: 1   MADDQGTKPSIMEPKPPHPLHQIAETPTHKLLLKQWLKEEELILNRIALKETQIDSVRKE 60

Query: 61  ITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSICSLLFSLGIIWAVRYKTDLE 120
           IT L++FFFVFHS +++LLFNAS+ D    +C RSWIPS+C+LL SLG+IWAVRYK+D+E
Sbjct: 61  ITQLYMFFFVFHSIALILLFNASSNDPVEKSCRRSWIPSLCTLLCSLGLIWAVRYKSDVE 120

Query: 121 AHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRD 180
           +HLEKLLEREKED  LL+KCVEELK+KGVEFDLLKEVDALRRAKSLRVE+KAV+KWS+RD
Sbjct: 121 SHLEKLLEREKEDGKLLAKCVEELKKKGVEFDLLKEVDALRRAKSLRVEAKAVKKWSARD 180

Query: 181 FMTLFFFSVSCMFLGIIRIVLCD 204
           F+TLFFFSVSC+ L + RI+LC+
Sbjct: 181 FVTLFFFSVSCLVLALTRIILCN 203

[Close]
BLAST of Cp4.1LG04g02240 vs. TAIR10
Match: AT3G12870.1 (AT3G12870.1 unknown protein)

HSP 1 Score: 292.0 bits (746), Expect = 2.9e-79
Identity = 150/206 (72.82%), Postives = 177/206 (85.92%), Query Frame = 1 

Query: 1   MNDNNNKSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKE 60
           M  + + +  IME+K  HPLHQIA TPTHKLLLKQWLKEEELI  RVS KE+QIDSVR+E
Sbjct: 1   MASDQSTNPPIMEAKTRHPLHQIADTPTHKLLLKQWLKEEELILSRVSHKESQIDSVRRE 60

Query: 61  ITMLHIFFFVFHSTSILLLFNASAKDFNGA---ACNRSWIPSICSLLFSLGIIWAVRYKT 120
           IT L+IFFF+FHS S+LLLF+AS+   + A   AC RSWIPS+C+LL SLGIIWAVRYK+
Sbjct: 61  ITQLYIFFFLFHSISLLLLFHASSSSSSSASSSACKRSWIPSLCALLSSLGIIWAVRYKS 120

Query: 121 DLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWS 180
           ++E+HLEKLLEREKED  LL KCVEELK+KG+EFDLLKEVDALRRAKSLRVESK V+KWS
Sbjct: 121 EVESHLEKLLEREKEDAKLLRKCVEELKKKGIEFDLLKEVDALRRAKSLRVESKPVKKWS 180

Query: 181 SRDFMTLFFFSVSCMFLGIIRIVLCD 204
           +RDF+TLFFFSVSC+ L +IR++LCD
Sbjct: 181 ARDFVTLFFFSVSCLVLAMIRLILCD 206

[Close]
BLAST of Cp4.1LG04g02240 vs. TAIR10
Match: AT5G56120.1 (AT5G56120.1 unknown protein)

HSP 1 Score: 115.5 bits (288), Expect = 3.7e-26
Identity = 72/204 (35.29%), Postives = 117/204 (57.35%), Query Frame = 1 

Query: 5   NNKSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITML 64
           +N  + I++    HPL +I+++P H LLLK W +EE+L   RV LKE++++S+++EI  L
Sbjct: 31  SNPGMGILKVIQQHPLSEISESPGHLLLLKLWQREEDLFCRRVLLKESRLESIKREIFQL 90

Query: 65  HIFFFVFHSTSILLLFNASAKD-----FNGAACNRSWIPSICSLLFSLGIIWAVRYKTDL 124
             FF VFH     L++++S  D      + A C + WIPS  SL  SL +++ V+ K  +
Sbjct: 91  CCFFLVFHGFFFTLVYSSSCSDDADVVKSNAVCKKWWIPSAVSLATSLVLVFLVQAKLFV 150

Query: 125 EAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESK-AVRKWSS 184
              + + + RE+ D   L++CV EL+ KG  FDL KE  + +R KS  VE K     W S
Sbjct: 151 FWKVYRGVNRERNDNRTLTRCVLELRMKGSSFDLSKEPMSGKRMKSSSVEIKWKPVTWFS 210

Query: 185 RDFMTLFFFSVSCMFLGIIRIVLC 203
           +  +T+     + +F  + + +LC
Sbjct: 211 QYLITIVLLCSAGLFFPVSKFILC 234

[Close]
BLAST of Cp4.1LG04g02240 vs. NCBI nr
Match: gi|659092559|ref|XP_008447121.1| (PREDICTED: uncharacterized protein LOC103489644 [Cucumis melo])

HSP 1 Score: 367.5 bits (942), Expect = 1.5e-98
Identity = 183/203 (90.15%), Postives = 199/203 (98.03%), Query Frame = 1 

Query: 1   MNDNNNKSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKE 60
           M+D+NNK+LSIME KPSHPLHQIA+TPTHKLLLKQWLKEEELIFGR+SLKETQIDSVRKE
Sbjct: 1   MDDSNNKALSIMEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKE 60

Query: 61  ITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSICSLLFSLGIIWAVRYKTDLE 120
           ITMLHIFFFVFHST+ILLLFNAS KDF+G AC RSWIPS+CSLLFSLGIIWAVRYKTD+E
Sbjct: 61  ITMLHIFFFVFHSTAILLLFNASTKDFHGVACKRSWIPSLCSLLFSLGIIWAVRYKTDVE 120

Query: 121 AHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRD 180
           AHLEKLLEREKEDRNLLSKCV+ELKRKG+EFDLLKEVDALRRAKSLRVE+KAVRKWSSRD
Sbjct: 121 AHLEKLLEREKEDRNLLSKCVDELKRKGIEFDLLKEVDALRRAKSLRVEAKAVRKWSSRD 180

Query: 181 FMTLFFFSVSCMFLGIIRIVLCD 204
           F+TLFFFSVSCMFLG+IR+VLC+
Sbjct: 181 FITLFFFSVSCMFLGVIRVVLCN 203

[Close]
BLAST of Cp4.1LG04g02240 vs. NCBI nr
Match: gi|778725991|ref|XP_004139828.2| (PREDICTED: uncharacterized protein LOC101213346 [Cucumis sativus])

HSP 1 Score: 367.1 bits (941), Expect = 2.0e-98
Identity = 183/203 (90.15%), Postives = 199/203 (98.03%), Query Frame = 1 

Query: 1   MNDNNNKSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKE 60
           M+D+NNK+LS+ME KPSHPLHQIA+TPTHKLLLKQWLKEEELIFGR+SLKETQIDSVRKE
Sbjct: 1   MDDSNNKALSLMEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKE 60

Query: 61  ITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSICSLLFSLGIIWAVRYKTDLE 120
           ITMLHIFFFVFHST+ILLLFNAS KDF+G AC RSWIPS+CSLLFSLGIIWAVRYKTD+E
Sbjct: 61  ITMLHIFFFVFHSTAILLLFNASTKDFHGVACKRSWIPSLCSLLFSLGIIWAVRYKTDVE 120

Query: 121 AHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRD 180
           AHLEKLLEREKEDRNLLSKCV+ELKRKG+EFDLLKEVDALRRAKSLRVE+KAVRKWSSRD
Sbjct: 121 AHLEKLLEREKEDRNLLSKCVDELKRKGIEFDLLKEVDALRRAKSLRVEAKAVRKWSSRD 180

Query: 181 FMTLFFFSVSCMFLGIIRIVLCD 204
           F+TLFFFSVSCMFLGIIR+VLC+
Sbjct: 181 FITLFFFSVSCMFLGIIRVVLCN 203

[Close]
BLAST of Cp4.1LG04g02240 vs. NCBI nr
Match: gi|1009130312|ref|XP_015882229.1| (PREDICTED: uncharacterized protein LOC107418074 [Ziziphus jujuba])

HSP 1 Score: 319.7 bits (818), Expect = 3.7e-84
Identity = 158/194 (81.44%), Postives = 182/194 (93.81%), Query Frame = 1 

Query: 10  SIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFF 69
           SIMESK  HPLHQIA+TPTHKLLLKQWLKEEELI GRVSLKETQIDSVRKEITML+IFFF
Sbjct: 9   SIMESKTPHPLHQIAETPTHKLLLKQWLKEEELILGRVSLKETQIDSVRKEITMLYIFFF 68

Query: 70  VFHSTSILLLFNASAKDFNGAACNRSWIPSICSLLFSLGIIWAVRYKTDLEAHLEKLLER 129
           +FHST+++LLFNAS++D +G AC+RSWIPS+CSLLFSLGIIWAVRYKTD+E HLEKLLER
Sbjct: 69  LFHSTALILLFNASSRDPHGVACHRSWIPSLCSLLFSLGIIWAVRYKTDMEVHLEKLLER 128

Query: 130 EKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSV 189
           EKED  LL+KCVEELK+KGVEFDL+KEVDALRRAKS+R+E+KAVRKWS+RDF+TLFFF+V
Sbjct: 129 EKEDGILLAKCVEELKKKGVEFDLMKEVDALRRAKSMRMEAKAVRKWSARDFVTLFFFTV 188

Query: 190 SCMFLGIIRIVLCD 204
           SC  L I R++LC+
Sbjct: 189 SCFVLAITRVILCN 202

[Close]
BLAST of Cp4.1LG04g02240 vs. NCBI nr
Match: gi|590612321|ref|XP_007022352.1| (Uncharacterized protein TCM_032572 [Theobroma cacao])

HSP 1 Score: 312.0 bits (798), Expect = 7.7e-82
Identity = 157/193 (81.35%), Postives = 177/193 (91.71%), Query Frame = 1 

Query: 10  SIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFF 69
           SIMESK  HPLHQIA+TPTH+LLLKQW+KEEELIF R+SLKETQIDSVRKEIT L+IFFF
Sbjct: 9   SIMESKQPHPLHQIAETPTHRLLLKQWVKEEELIFNRISLKETQIDSVRKEITQLYIFFF 68

Query: 70  VFHSTSILLLFNASAKDFNGAACNRSWIPSICSLLFSLGIIWAVRYKTDLEAHLEKLLER 129
           +FHS S+LLLFN+S+KD    AC+RSWIPS+CSLL S+GI WAVRYKTD+E HLEKLLER
Sbjct: 69  LFHSISLLLLFNSSSKDPPTGACHRSWIPSLCSLLCSMGITWAVRYKTDVEGHLEKLLER 128

Query: 130 EKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSV 189
           EKED  LL+KCVEELK+KGVEFDLLKEVDALRRAKSLRVE+KAVRKWS+RDF+TLFFFSV
Sbjct: 129 EKEDGKLLAKCVEELKKKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSARDFVTLFFFSV 188

Query: 190 SCMFLGIIRIVLC 203
           SCM LG+ RI+LC
Sbjct: 189 SCMVLGLTRIILC 201

[Close]
BLAST of Cp4.1LG04g02240 vs. NCBI nr
Match: gi|566170455|ref|XP_002306402.2| (hypothetical protein POPTR_0005s09880g [Populus trichocarpa])

HSP 1 Score: 307.4 bits (786), Expect = 1.9e-80
Identity = 161/207 (77.78%), Postives = 179/207 (86.47%), Query Frame = 1 

Query: 1   MNDNNNKSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKE 60
           M D +    SIME K  HPLHQIA+TPTHKLLLKQWLKEEELIF R+SLKETQIDSV KE
Sbjct: 1   MADQSANPSSIMEPKQQHPLHQIAETPTHKLLLKQWLKEEELIFNRISLKETQIDSVCKE 60

Query: 61  ITMLHIFFFVFHSTSILLLFNASAKDFNGA----ACNRSWIPSICSLLFSLGIIWAVRYK 120
           IT L+IFFF+FHS S+LLLFNAS+KD  GA    AC RSWIPS+CSLL SLGIIWAVRYK
Sbjct: 61  ITQLYIFFFLFHSISLLLLFNASSKDPFGAKGSEACKRSWIPSLCSLLCSLGIIWAVRYK 120

Query: 121 TDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKW 180
           TD+E HLEKLLEREKED  LL+KCVEELK+KG EFDLLKEVDALRRAKSLRVE+K VRKW
Sbjct: 121 TDVECHLEKLLEREKEDGQLLAKCVEELKKKGGEFDLLKEVDALRRAKSLRVETKVVRKW 180

Query: 181 SSRDFMTLFFFSVSCMFLGIIRIVLCD 204
           S+RDF+TLFFFSVSC+ LG+ RI+LC+
Sbjct: 181 SARDFVTLFFFSVSCLVLGLTRIILCN 207

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g02240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG04g02240 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K424_CUCSA1.4e-9890.15Uncharacterized protein OS=Cucumis sativus GN=Csa_7G237880 PE=4 SV=1[more]
A0A061FAX1_THECC5.4e-8281.35Uncharacterized protein OS=Theobroma cacao GN=TCM_032572 PE=4 SV=1[more]
B9H620_POPTR1.3e-8077.78Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s09880g PE=4 SV=2[more]
A0A067JZX7_JATCU8.6e-8078.97Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22629 PE=4 SV=1[more]
A0A067FDV4_CITSI1.9e-7974.88Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g045165mg PE=4 SV=1[more]
BLAST of Cp4.1LG04g02240 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G12870.12.9e-7972.82 unknown protein[more]
AT5G56120.13.7e-2635.29 unknown protein[more]
BLAST of Cp4.1LG04g02240 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659092559|ref|XP_008447121.1|1.5e-9890.15PREDICTED: uncharacterized protein LOC103489644 [Cucumis melo][more]
gi|778725991|ref|XP_004139828.2|2.0e-9890.15PREDICTED: uncharacterized protein LOC101213346 [Cucumis sativus][more]
gi|1009130312|ref|XP_015882229.1|3.7e-8481.44PREDICTED: uncharacterized protein LOC107418074 [Ziziphus jujuba][more]
gi|590612321|ref|XP_007022352.1|7.7e-8281.35Uncharacterized protein TCM_032572 [Theobroma cacao][more]
gi|566170455|ref|XP_002306402.2|1.9e-8077.78hypothetical protein POPTR_0005s09880g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009506 plasmodesma
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g02240.1Cp4.1LG04g02240.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 127..147
scor
NoneNo IPR availablePANTHERPTHR33287FAMILY NOT NAMEDcoord: 1..203
score: 1.2E
NoneNo IPR availablePANTHERPTHR33287:SF1SUBFAMILY NOT NAMEDcoord: 1..203
score: 1.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g02240Cucsa.239690Cucumber (Gy14) v1cgycpeB0636
Cp4.1LG04g02240CmaCh11G019710Cucurbita maxima (Rimu)cmacpeB148
Cp4.1LG04g02240CmaCh19G010930Cucurbita maxima (Rimu)cmacpeB537
Cp4.1LG04g02240CmoCh11G020590Cucurbita moschata (Rifu)cmocpeB126
Cp4.1LG04g02240Cla005503Watermelon (97103) v1cpewmB626
Cp4.1LG04g02240Csa7G237880Cucumber (Chinese Long) v2cpecuB691
Cp4.1LG04g02240MELO3C012619Melon (DHL92) v3.5.1cpemeB611
Cp4.1LG04g02240ClCG09G022620Watermelon (Charleston Gray)cpewcgB574
Cp4.1LG04g02240CSPI07G10800Wild cucumber (PI 183967)cpecpiB693
Cp4.1LG04g02240Lsi11G016140Bottle gourd (USVL1VR-Ls)cpelsiB531
Cp4.1LG04g02240MELO3C012619.2Melon (DHL92) v3.6.1cpemedB723
Cp4.1LG04g02240CsaV3_7G022780Cucumber (Chinese Long) v3cpecucB0864
Cp4.1LG04g02240CsGy7G010150Cucumber (Gy14) v2cgybcpeB965
Cp4.1LG04g02240Carg04679Silver-seed gourdcarcpeB0547
Cp4.1LG04g02240Carg15664Silver-seed gourdcarcpeB0754
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG04g02240Cp4.1LG15g08890Cucurbita pepo (Zucchini)cpecpeB267
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g02240Wax gourdcpewgoB0854
Cp4.1LG04g02240Wax gourdcpewgoB0865
Cp4.1LG04g02240Cucurbita pepo (Zucchini)cpecpeB306
Cp4.1LG04g02240Cucurbita pepo (Zucchini)cpecpeB492
Cp4.1LG04g02240Cucumber (Gy14) v1cgycpeB0297
Cp4.1LG04g02240Cucurbita maxima (Rimu)cmacpeB573
Cp4.1LG04g02240Cucurbita maxima (Rimu)cmacpeB642
Cp4.1LG04g02240Cucurbita moschata (Rifu)cmocpeB492
Cp4.1LG04g02240Cucurbita moschata (Rifu)cmocpeB524
Cp4.1LG04g02240Cucurbita moschata (Rifu)cmocpeB592
Cp4.1LG04g02240Wild cucumber (PI 183967)cpecpiB690
Cp4.1LG04g02240Cucumber (Chinese Long) v2cpecuB688
Cp4.1LG04g02240Bottle gourd (USVL1VR-Ls)cpelsiB523
Cp4.1LG04g02240Watermelon (Charleston Gray)cpewcgB592
Cp4.1LG04g02240Watermelon (97103) v1cpewmB668
Cp4.1LG04g02240Melon (DHL92) v3.5.1cpemeB598
Cp4.1LG04g02240Cucumber (Gy14) v2cgybcpeB839
Cp4.1LG04g02240Cucumber (Gy14) v2cgybcpeB843
Cp4.1LG04g02240Melon (DHL92) v3.6.1cpemedB707
Cp4.1LG04g02240Silver-seed gourdcarcpeB0474
Cp4.1LG04g02240Cucumber (Chinese Long) v3cpecucB0862
Cp4.1LG04g02240Cucumber (Chinese Long) v3cpecucB0854