Carg15664 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15664
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	RNA polymerase II elongation factor
Location	Cucurbita_argyrosperma_scaffold_081 : 227557 .. 228135 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCGAAGCCTTCACACCCACTTCACCAAATTGCCGAAACCCCAACCCACAAACTTCTTCTCAAGCAGTGGCTCAAGGAAGAGGAACTAATCTTCGGAAGAATCTCTCTGAAAGAAACCCAAATCGACTCTGTGAGGAAAGAAATCACTATGCTTCACATTTTCTTCTTCATCTTCCACTCCACCGCCGTGCTCCTCCTCTTCAATGCCTCGACGAAGGATTTCCATGGAGTAGCCTGCAACAGATCCTGGATTCCGTCGCTTTGTTCTCTGTTGTTCTCTCTGGGTATCATTTGGGCCGTGAGATACAAGACCGATCTTGAGGCCCACTTGGAGAAACTGCTGGAAAGGGAAAAGGAAGACAGGAATTTGCTGGGGAAGTGTGTTGATGAGTTGAAGAGGAAAGGGGTTGAGTTTGATTTGTTGAAGGAGGTGGATGCGCTGAGGAGGGCGAAGAGCCTGAGGGTTGAAGCTAAGGCTGTCAGAAAATGGTCTTCAAGGGATTTCATCACTCTGTTTTTCTTCTCTGTTTCCTGTATGTTTCTTGGGATTATTAGGGTTGTTCTGTGTAACTAG

mRNA sequence

ATGGAACCGAAGCCTTCACACCCACTTCACCAAATTGCCGAAACCCCAACCCACAAACTTCTTCTCAAGCAGTGGCTCAAGGAAGAGGAACTAATCTTCGGAAGAATCTCTCTGAAAGAAACCCAAATCGACTCTGTGAGGAAAGAAATCACTATGCTTCACATTTTCTTCTTCATCTTCCACTCCACCGCCGTGCTCCTCCTCTTCAATGCCTCGACGAAGGATTTCCATGGAGTAGCCTGCAACAGATCCTGGATTCCGTCGCTTTGTTCTCTGTTGTTCTCTCTGGGTATCATTTGGGCCGTGAGATACAAGACCGATCTTGAGGCCCACTTGGAGAAACTGCTGGAAAGGGAAAAGGAAGACAGGAATTTGCTGGGGAAGTGTGTTGATGAGTTGAAGAGGAAAGGGGTTGAGTTTGATTTGTTGAAGGAGGTGGATGCGCTGAGGAGGGCGAAGAGCCTGAGGGTTGAAGCTAAGGCTGTCAGAAAATGGTCTTCAAGGGATTTCATCACTCTGTTTTTCTTCTCTGTTTCCTGTATGTTTCTTGGGATTATTAGGGTTGTTCTGTGTAACTAG

Coding sequence (CDS)

ATGGAACCGAAGCCTTCACACCCACTTCACCAAATTGCCGAAACCCCAACCCACAAACTTCTTCTCAAGCAGTGGCTCAAGGAAGAGGAACTAATCTTCGGAAGAATCTCTCTGAAAGAAACCCAAATCGACTCTGTGAGGAAAGAAATCACTATGCTTCACATTTTCTTCTTCATCTTCCACTCCACCGCCGTGCTCCTCCTCTTCAATGCCTCGACGAAGGATTTCCATGGAGTAGCCTGCAACAGATCCTGGATTCCGTCGCTTTGTTCTCTGTTGTTCTCTCTGGGTATCATTTGGGCCGTGAGATACAAGACCGATCTTGAGGCCCACTTGGAGAAACTGCTGGAAAGGGAAAAGGAAGACAGGAATTTGCTGGGGAAGTGTGTTGATGAGTTGAAGAGGAAAGGGGTTGAGTTTGATTTGTTGAAGGAGGTGGATGCGCTGAGGAGGGCGAAGAGCCTGAGGGTTGAAGCTAAGGCTGTCAGAAAATGGTCTTCAAGGGATTTCATCACTCTGTTTTTCTTCTCTGTTTCCTGTATGTTTCTTGGGATTATTAGGGTTGTTCTGTGTAACTAG

Protein sequence

MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFIFHSTAVLLLFNASTKDFHGVACNRSWIPSLCSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLGKCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSCMFLGIIRVVLCN

Homology

[Close]

BLAST of Carg15664 vs. NCBI nr
Match: XP_022952110.1 (uncharacterized protein LOC111454873 [Cucurbita moschata])

HSP 1 Score: 378.3 bits (970), Expect = 1.6e-101
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFIF 60
           MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFIF
Sbjct: 11  MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFIF 70

Query: 61  HSTAVLLLFNASTKDFHGVACNRSWIPSLCSLLFSLGIIWAVRYKTDLEAHLEKLLEREK 120
           HSTAVLLLFNASTKDFHGVACNRSWIPSLCSLLFSLGIIWAVRYKTDLEAHLEKLLEREK
Sbjct: 71  HSTAVLLLFNASTKDFHGVACNRSWIPSLCSLLFSLGIIWAVRYKTDLEAHLEKLLEREK 130

Query: 121 EDRNLLGKCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSC 180
           EDRNLLGKCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSC
Sbjct: 131 EDRNLLGKCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSC 190

Query: 181 MFLGIIRVVLCN 193
           MFLGIIRVVLCN
Sbjct: 191 MFLGIIRVVLCN 202

[Close]

BLAST of Carg15664 vs. NCBI nr
Match: XP_023553637.1 (uncharacterized protein LOC111811128 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 378.3 bits (970), Expect = 1.6e-101
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFIF 60
           MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFIF
Sbjct: 102 MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFIF 161

Query: 61  HSTAVLLLFNASTKDFHGVACNRSWIPSLCSLLFSLGIIWAVRYKTDLEAHLEKLLEREK 120
           HSTAVLLLFNASTKDFHGVACNRSWIPSLCSLLFSLGIIWAVRYKTDLEAHLEKLLEREK
Sbjct: 162 HSTAVLLLFNASTKDFHGVACNRSWIPSLCSLLFSLGIIWAVRYKTDLEAHLEKLLEREK 221

Query: 121 EDRNLLGKCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSC 180
           EDRNLLGKCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSC
Sbjct: 222 EDRNLLGKCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSC 281

Query: 181 MFLGIIRVVLCN 193
           MFLGIIRVVLCN
Sbjct: 282 MFLGIIRVVLCN 293

[Close]

BLAST of Carg15664 vs. NCBI nr
Match: XP_022968874.1 (uncharacterized protein LOC111468053 [Cucurbita maxima])

HSP 1 Score: 377.1 bits (967), Expect = 3.6e-101
Identity = 191/192 (99.48%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFIF 60
           MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFIF
Sbjct: 11  MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFIF 70

Query: 61  HSTAVLLLFNASTKDFHGVACNRSWIPSLCSLLFSLGIIWAVRYKTDLEAHLEKLLEREK 120
           HSTAVLLLFNASTKDFHGVACNRSWIPSLCSLLFSLGIIWAVRYKTDLEAHL+KLLEREK
Sbjct: 71  HSTAVLLLFNASTKDFHGVACNRSWIPSLCSLLFSLGIIWAVRYKTDLEAHLDKLLEREK 130

Query: 121 EDRNLLGKCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSC 180
           EDRNLLGKCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSC
Sbjct: 131 EDRNLLGKCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSC 190

Query: 181 MFLGIIRVVLCN 193
           MFLGIIRVVLCN
Sbjct: 191 MFLGIIRVVLCN 202

[Close]

BLAST of Carg15664 vs. NCBI nr
Match: XP_004139828.2 (PREDICTED: uncharacterized protein LOC101213346 [Cucumis sativus] >KGN44273.1 hypothetical protein Csa_7G237880 [Cucumis sativus])

HSP 1 Score: 371.3 bits (952), Expect = 2.0e-99
Identity = 186/192 (96.88%), Postives = 190/192 (98.96%), Query Frame = 0


Query: 1   MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFIF 60
           MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFF+F
Sbjct: 12  MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVF 71

Query: 61  HSTAVLLLFNASTKDFHGVACNRSWIPSLCSLLFSLGIIWAVRYKTDLEAHLEKLLEREK 120
           HSTA+LLLFNASTKDFHGVAC RSWIPSLCSLLFSLGIIWAVRYKTD+EAHLEKLLEREK
Sbjct: 72  HSTAILLLFNASTKDFHGVACKRSWIPSLCSLLFSLGIIWAVRYKTDVEAHLEKLLEREK 131

Query: 121 EDRNLLGKCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSC 180
           EDRNLL KCVDELKRKG+EFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSC
Sbjct: 132 EDRNLLSKCVDELKRKGIEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSC 191

Query: 181 MFLGIIRVVLCN 193
           MFLGIIRVVLCN
Sbjct: 192 MFLGIIRVVLCN 203

[Close]

BLAST of Carg15664 vs. NCBI nr
Match: XP_008447121.1 (PREDICTED: uncharacterized protein LOC103489644 [Cucumis melo])

HSP 1 Score: 370.9 bits (951), Expect = 2.6e-99
Identity = 185/192 (96.35%), Postives = 190/192 (98.96%), Query Frame = 0


Query: 1   MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFIF 60
           MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFF+F
Sbjct: 12  MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVF 71

Query: 61  HSTAVLLLFNASTKDFHGVACNRSWIPSLCSLLFSLGIIWAVRYKTDLEAHLEKLLEREK 120
           HSTA+LLLFNASTKDFHGVAC RSWIPSLCSLLFSLGIIWAVRYKTD+EAHLEKLLEREK
Sbjct: 72  HSTAILLLFNASTKDFHGVACKRSWIPSLCSLLFSLGIIWAVRYKTDVEAHLEKLLEREK 131

Query: 121 EDRNLLGKCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSC 180
           EDRNLL KCVDELKRKG+EFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSC
Sbjct: 132 EDRNLLSKCVDELKRKGIEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSC 191

Query: 181 MFLGIIRVVLCN 193
           MFLG+IRVVLCN
Sbjct: 192 MFLGVIRVVLCN 203

[Close]

BLAST of Carg15664 vs. TAIR10
Match: AT3G12870.1 (unknown protein)

HSP 1 Score: 246.5 bits (628), Expect = 1.3e-65
Identity = 129/195 (66.15%), Postives = 151/195 (77.44%), Query Frame = 0


Query: 1   MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHI---FF 60
           ME K  HPLHQIA+TPTHKLLLKQWLKEEELI  R+S KE+QIDSVR+EIT L+I     
Sbjct: 12  MEAKTRHPLHQIADTPTHKLLLKQWLKEEELILSRVSHKESQIDSVRREITQLYIXXXXX 71

Query: 61  FIFHSTAVLLLFNASTKDFHGVACNRSWIPSLCSLLFSLGIIWAVRYKTDLEAHLEKLLE 120
                                    RSWIPSLC+LL SLGIIWAVRYK+++E+HLEKLLE
Sbjct: 72  XXXXXXXXXXXXXXXXXXXXXXXXKRSWIPSLCALLSSLGIIWAVRYKSEVESHLEKLLE 131

Query: 121 REKEDRNLLGKCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFS 180
           REKED  LL KCV+ELK+KG+EFDLLKEVDALRRAKSLRVE+K V+KWS+RDF+TLFFFS
Sbjct: 132 REKEDAKLLRKCVEELKKKGIEFDLLKEVDALRRAKSLRVESKPVKKWSARDFVTLFFFS 191

Query: 181 VSCMFLGIIRVVLCN 193
           VSC+ L +IR++LC+
Sbjct: 192 VSCLVLAMIRLILCD 206

[Close]

BLAST of Carg15664 vs. TAIR10
Match: AT5G56120.1 (unknown protein)

HSP 1 Score: 112.8 bits (281), Expect = 2.3e-25
Identity = 70/191 (36.65%), Postives = 109/191 (57.07%), Query Frame = 0


Query: 7   HPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFIFHSTAVL 66
           HPL +I+E+P H LLLK W +EE+L   R+ LKE++++S+++EI  L  FF +FH     
Sbjct: 44  HPLSEISESPGHLLLLKLWQREEDLFCRRVLLKESRLESIKREIFQLCCFFLVFHGFFFT 103

Query: 67  LLFNASTKDFHGV-----ACNRSWIPSLCSLLFSLGIIWAVRYKTDLEAHLEKLLEREKE 126
           L++++S  D   V      C + WIPS  SL  SL +++ V+ K  +   + + + RE+ 
Sbjct: 104 LVYSSSCSDDADVVKSNAVCKKWWIPSAVSLATSLVLVFLVQAKLFVFWKVYRGVNRERN 163

Query: 127 DRNLLGKCVDELKRKGVEFDLLKEVDALRRAKSLRVEAK-AVRKWSSRDFITLFFFSVSC 186
           D   L +CV EL+ KG  FDL KE  + +R KS  VE K     W S+  IT+     + 
Sbjct: 164 DNRTLTRCVLELRMKGSSFDLSKEPMSGKRMKSSSVEIKWKPVTWFSQYLITIVLLCSAG 223

Query: 187 MFLGIIRVVLC 192
           +F  + + +LC
Sbjct: 224 LFFPVSKFILC 234

[Close]

BLAST of Carg15664 vs. TrEMBL
Match: tr|A0A0A0K424|A0A0A0K424_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G237880 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 1.3e-99
Identity = 186/192 (96.88%), Postives = 190/192 (98.96%), Query Frame = 0


Query: 1   MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFIF 60
           MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFF+F
Sbjct: 12  MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVF 71

Query: 61  HSTAVLLLFNASTKDFHGVACNRSWIPSLCSLLFSLGIIWAVRYKTDLEAHLEKLLEREK 120
           HSTA+LLLFNASTKDFHGVAC RSWIPSLCSLLFSLGIIWAVRYKTD+EAHLEKLLEREK
Sbjct: 72  HSTAILLLFNASTKDFHGVACKRSWIPSLCSLLFSLGIIWAVRYKTDVEAHLEKLLEREK 131

Query: 121 EDRNLLGKCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSC 180
           EDRNLL KCVDELKRKG+EFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSC
Sbjct: 132 EDRNLLSKCVDELKRKGIEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSC 191

Query: 181 MFLGIIRVVLCN 193
           MFLGIIRVVLCN
Sbjct: 192 MFLGIIRVVLCN 203

[Close]

BLAST of Carg15664 vs. TrEMBL
Match: tr|A0A1S3BHA3|A0A1S3BHA3_CUCME (uncharacterized protein LOC103489644 OS=Cucumis melo OX=3656 GN=LOC103489644 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.7e-99
Identity = 185/192 (96.35%), Postives = 190/192 (98.96%), Query Frame = 0


Query: 1   MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFIF 60
           MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFF+F
Sbjct: 12  MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVF 71

Query: 61  HSTAVLLLFNASTKDFHGVACNRSWIPSLCSLLFSLGIIWAVRYKTDLEAHLEKLLEREK 120
           HSTA+LLLFNASTKDFHGVAC RSWIPSLCSLLFSLGIIWAVRYKTD+EAHLEKLLEREK
Sbjct: 72  HSTAILLLFNASTKDFHGVACKRSWIPSLCSLLFSLGIIWAVRYKTDVEAHLEKLLEREK 131

Query: 121 EDRNLLGKCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSC 180
           EDRNLL KCVDELKRKG+EFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSC
Sbjct: 132 EDRNLLSKCVDELKRKGIEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSC 191

Query: 181 MFLGIIRVVLCN 193
           MFLG+IRVVLCN
Sbjct: 192 MFLGVIRVVLCN 203

[Close]

BLAST of Carg15664 vs. TrEMBL
Match: tr|M5WJ16|M5WJ16_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G137100 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 6.5e-83
Identity = 154/192 (80.21%), Postives = 175/192 (91.15%), Query Frame = 0


Query: 1   MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFIF 60
           MEPK  HPLHQIAE+P+HKLLLKQWLKEEELI  R+SLKE QIDSVRKEITML IFFF+F
Sbjct: 11  MEPKSWHPLHQIAESPSHKLLLKQWLKEEELILNRVSLKENQIDSVRKEITMLFIFFFLF 70

Query: 61  HSTAVLLLFNASTKDFHGVACNRSWIPSLCSLLFSLGIIWAVRYKTDLEAHLEKLLEREK 120
           HSTA++LLF++S++D HG AC RSWIPSLCSL FSLGIIWA+RYKTD+E HLEKLLEREK
Sbjct: 71  HSTALILLFSSSSRDPHGFACRRSWIPSLCSLCFSLGIIWAIRYKTDMEGHLEKLLEREK 130

Query: 121 EDRNLLGKCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSVSC 180
           ED+NLLGKC++ELK+KG+EFDLLKEVDALRRAKSLRVEAK VRKWS+RDF+TLFFF+VSC
Sbjct: 131 EDKNLLGKCIEELKKKGLEFDLLKEVDALRRAKSLRVEAKEVRKWSARDFVTLFFFTVSC 190

Query: 181 MFLGIIRVVLCN 193
             L I R +LCN
Sbjct: 191 FVLVITRAILCN 202

[Close]

BLAST of Carg15664 vs. TrEMBL
Match: tr|A0A2N9ER88|A0A2N9ER88_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS9208 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 3.2e-82
Identity = 157/196 (80.10%), Postives = 176/196 (89.80%), Query Frame = 0


Query: 1   MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFIF 60
           ME KP HPLHQIAETPTHKLLLKQWLKEEELI GRI+LKETQIDSVRKEITML+IFFF+F
Sbjct: 11  MESKPRHPLHQIAETPTHKLLLKQWLKEEELILGRITLKETQIDSVRKEITMLYIFFFLF 70

Query: 61  HSTAVLLLFNASTKD----FHGVACNRSWIPSLCSLLFSLGIIWAVRYKTDLEAHLEKLL 120
           HSTA++LLFNAS+      ++ +AC RSWIPSLCS+LFSLGIIWAVRYKTD+E HLEKLL
Sbjct: 71  HSTALVLLFNASSSSDPLGYNKLACRRSWIPSLCSILFSLGIIWAVRYKTDVEVHLEKLL 130

Query: 121 EREKEDRNLLGKCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFF 180
           EREKED NLL KC +ELK+KG+EFDLLKEVDALRRAKSLRVEAK VRKWS+RDF+TLFFF
Sbjct: 131 EREKEDGNLLAKCAEELKKKGLEFDLLKEVDALRRAKSLRVEAKEVRKWSARDFVTLFFF 190

Query: 181 SVSCMFLGIIRVVLCN 193
           ++SC  L I RV+LCN
Sbjct: 191 TMSCFVLAITRVILCN 206

[Close]

BLAST of Carg15664 vs. TrEMBL
Match: tr|A0A2I4FE90|A0A2I4FE90_9ROSI (uncharacterized protein LOC108998004 OS=Juglans regia OX=51240 GN=LOC108998004 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 3.2e-82
Identity = 157/194 (80.93%), Postives = 178/194 (91.75%), Query Frame = 0


Query: 1   MEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFIF 60
           ME KP HPLHQIAETPTHKLLLKQWLKEEELI GRI+LKETQIDSVR EITML+IFFF+F
Sbjct: 12  MESKPLHPLHQIAETPTHKLLLKQWLKEEELILGRIALKETQIDSVRSEITMLYIFFFVF 71

Query: 61  HSTAVLLLFNASTKD--FHGVACNRSWIPSLCSLLFSLGIIWAVRYKTDLEAHLEKLLER 120
           HSTA++LLFNAS++D   + +AC+RSWIPSLCS+LFSLGIIWAVRYKTD+E HLEKLLER
Sbjct: 72  HSTALVLLFNASSRDPVANKLACHRSWIPSLCSILFSLGIIWAVRYKTDVEVHLEKLLER 131

Query: 121 EKEDRNLLGKCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDFITLFFFSV 180
           EKED  LL KCV+ELK+KGVEFDLLKEVDALRRAKSLRVE KAVRKWS+RDF+TLFFF++
Sbjct: 132 EKEDGKLLAKCVEELKKKGVEFDLLKEVDALRRAKSLRVETKAVRKWSARDFVTLFFFAM 191

Query: 181 SCMFLGIIRVVLCN 193
           SC+ L I RV+LC+
Sbjct: 192 SCLVLAITRVILCD 205

The following BLAST results are available for this feature:

BLAST of Carg15664 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952110.1	1.6e-101	100.00	uncharacterized protein LOC111454873 [Cucurbita moschata]	[more]
XP_023553637.1	1.6e-101	100.00	uncharacterized protein LOC111811128 [Cucurbita pepo subsp. pepo]	[more]
XP_022968874.1	3.6e-101	99.48	uncharacterized protein LOC111468053 [Cucurbita maxima]	[more]
XP_004139828.2	2.0e-99	96.88	PREDICTED: uncharacterized protein LOC101213346 [Cucumis sativus] >KGN44273.1 hy...	[more]
XP_008447121.1	2.6e-99	96.35	PREDICTED: uncharacterized protein LOC103489644 [Cucumis melo]	[more]

BLAST of Carg15664 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12870.1	1.3e-65	66.15	unknown protein	[more]
AT5G56120.1	2.3e-25	36.65	unknown protein	[more]

BLAST of Carg15664 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg15664 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K424\|A0A0A0K424_CUCSA	1.3e-99	96.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G237880 PE=4 SV=1	[more]
tr\|A0A1S3BHA3\|A0A1S3BHA3_CUCME	1.7e-99	96.35	uncharacterized protein LOC103489644 OS=Cucumis melo OX=3656 GN=LOC103489644 PE=...	[more]
tr\|M5WJ16\|M5WJ16_PRUPE	6.5e-83	80.21	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G137100 PE=4 SV=1	[more]
tr\|A0A2N9ER88\|A0A2N9ER88_FAGSY	3.2e-82	80.10	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS9208 PE=4 SV=1	[more]
tr\|A0A2I4FE90\|A0A2I4FE90_9ROSI	3.2e-82	80.93	uncharacterized protein LOC108998004 OS=Juglans regia OX=51240 GN=LOC108998004 P...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15664-RA	Carg15664-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33287	FAMILY NOT NAMED	coord: 6..191

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15664	Cla005503	Watermelon (97103) v1	carwmB0528
Carg15664	Csa7G237880	Cucumber (Chinese Long) v2	carcuB0564
Carg15664	MELO3C012619	Melon (DHL92) v3.5.1	carmeB0537
Carg15664	ClCG09G022620	Watermelon (Charleston Gray)	carwcgB0515
Carg15664	CSPI07G10800	Wild cucumber (PI 183967)	carcpiB0570
Carg15664	Cucsa.239690	Cucumber (Gy14) v1	carcgyB0612
Carg15664	CmaCh19G010930	Cucurbita maxima (Rimu)	carcmaB0745
Carg15664	CmaCh11G019710	Cucurbita maxima (Rimu)	carcmaB0744
Carg15664	CmoCh11G020590	Cucurbita moschata (Rifu)	carcmoB0722
Carg15664	Lsi11G016140	Bottle gourd (USVL1VR-Ls)	carlsiB484
Carg15664	Cp4.1LG15g08890	Cucurbita pepo (Zucchini)	carcpeB0751
Carg15664	Cp4.1LG04g02240	Cucurbita pepo (Zucchini)	carcpeB0754
Carg15664	CsGy7G010150	Cucumber (Gy14) v2	carcgybB0541
Carg15664	MELO3C012619.2	Melon (DHL92) v3.6.1	carmedB0542
Carg15664	CsaV3_7G022780	Cucumber (Chinese Long) v3	carcucB0572
Carg15664	Cla97C09G184160	Watermelon (97103) v2	carwmbB0559

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15664	Carg04679	Silver-seed gourd	carcarB415

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15664	Silver-seed gourd	carcarB033
Carg15664	Silver-seed gourd	carcarB358
Carg15664	Cucumber (Gy14) v2	carcgybB0537
Carg15664	Cucumber (Gy14) v1	carcgyB0610
Carg15664	Cucurbita maxima (Rimu)	carcmaB0746
Carg15664	Cucurbita maxima (Rimu)	carcmaB0747
Carg15664	Cucurbita moschata (Rifu)	carcmoB0723
Carg15664	Cucurbita moschata (Rifu)	carcmoB0724
Carg15664	Cucurbita moschata (Rifu)	carcmoB0725
Carg15664	Cucurbita pepo (Zucchini)	carcpeB0752
Carg15664	Cucurbita pepo (Zucchini)	carcpeB0755
Carg15664	Wild cucumber (PI 183967)	carcpiB0566
Carg15664	Cucumber (Chinese Long) v2	carcuB0560
Carg15664	Cucumber (Chinese Long) v3	carcucB0568
Carg15664	Bottle gourd (USVL1VR-Ls)	carlsiB483
Carg15664	Melon (DHL92) v3.5.1	carmeB0536
Carg15664	Melon (DHL92) v3.6.1	carmedB0541
Carg15664	Watermelon (Charleston Gray)	carwcgB0516
Carg15664	Watermelon (97103) v1	carwmB0530
Carg15664	Watermelon (97103) v2	carwmbB0556
Carg15664	Wax gourd	carwgoB0641
Carg15664	Wax gourd	carwgoB0643