Cp4.1LG04g00400 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g00400
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Description60S ribosomal protein L22-like
LocationCp4.1LG04 : 1644152 .. 1646309 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGGGGTGTAGTGTGTGGGTTAAGAGAACAAACCCATTGGAAGTCCATGTCCATCGGCGGCCCAATCTGGTTACTATATATCATAAACCTAGCTCGTTTAGGGCTTCACTTGGCGGCCGTCGGTATCTGAGTTCTCAAAGTCTCTGCAGCACCCGGTAATTCTCTCTTCCTCTCTGTTATGTTGCTTCCAATGATCTTAATCTAGTCGTTTTTAGGCATCAATACATTGGATTTTCTTCTGATTGCAGAGATTTTTAACTAAATCGAAAATGAGTCGAGGAGGTGCAGCCGGTCCCAAGGGGAAGAAGAAGGGAGTAACCTTCACAATCGACTGTTCGAAGCCGGTGGAAGATAAGATTATGGACATTGCTTCTCTGGAAAAGTTTCTTTTGGAGAGGATTAAAGTCGGAGGCAAGGCTGGAGCTCTTGGCGATGCCGTCTCTGTTACTCGTGAGAAGAGTAAAATTACCGTCACTTCTGACAGTAATTTCTCCAAGAGGTATACGTTTTTTTTTTTTCCTTTCATTTGAATCATTAGTTTGTTATGAATCAATGTTGAGACCAGTTTTATTTCAGAAGTTGTATTTTGGATGTAGTTTTGTACATAAAGTTTGTATTGAGGAGTGGCTAGGTTGAATATTTCTTACGTGATAGTGTTTTGAATGTTACAAATATGTGCTATTGTTCTAAAGCTATATTTGAGATTTGTTATAGTGAGGGGCAACTTAGGCTTGTTATGTTTGATATTTGTTTGTATGATGAACATGATTGAATGTACTGAACTCCGATGGAGAATTCTGAGATTCGAGACGAGGGCAGAATAATTGATTCTAAAATAAGGGTTGTTTCGTTTGAATTTTGTTCTGTATAAAGTTATTGATTGAATGTGTATTGAAAATCCATTTGTAGAATTCTGAGAGTCAGACATTTTGAATACCATTACAGCATTTTGAGGGCTCTGATTATATATATAGTTTCTTAACGGGTTTTGGTTCTTCTATTTTTGAAGTTTGGGATATAGAATAGGCTGTTCATATTGGAAAGTTGATTGGCAGTTTCCTTGTGTAACTATTTAGAGTGTAACCTAAACATGGTGAACTTGTTATGTTTACTTGATGTGCTGGTTGCGTTGGTTTGTTTGTGAATATGTAGAAATAGAACACTGTGCTGTTTGACGTGCTAATTATTTGTTCTTTTGAATCTATTATTCCTGTAAATTTGCTCATTTTTTGTCGAAGTATTCATGTGGGCACATAGTTCTAGTGATTTGTGATTTGTGATTGGTTTTGTTAGTTAGCTTATTCCCTCCCTTGTTCCTTTCCCCAACGTAGCAATGTGGTCTTCCAATAAGTTCATTTTATCATTTTATTGAGGTTGTTCTTGGAGTTGATTGATGTCAATCGACTTATGTATTTGCGTCTAGGTTTCTGCATTTAATTGTGTCTTCATTCCTACACTTGAAGATATAGGAATAGGAACCGAGAGGGATAGAATAGATCACAAATCGCTCGGCCTATTTACTCATTGGTGATGTGTTGCTAAGCAATATCTTAGGCAGTTGTAGAAACTCAATATCTAAATTGCATTAGTCTCTCCGTTTGTTCTTCTGACACGTAGCAATTTGGCCTCGAGAACTCTGGCGTGTATAAAACAAAAATGATTGTATATGTAAGGAACATGAACTATGACTGATTTTATCTTATATCTGTCTGTTGTAGATATTTGAAGTACTTGACCAAGAAGTACCTGAAGAAACACAATGTGCGAGATTGGCTACGAGTGATCGCTGCGAACAAAGATAGGAACGTTTACGAACTCAGGTACTTCAACATTGCCGAGAATGAGGGAGAGGAAGAGGATTAAATTTATGAATTTGACATTGCATTTAAGGAACAAATTATGTCGCAGCAATCTCTCACTGTTTTTGTTACTACTGTTGCTTGTGTGATCCTTTATTTTTTTCATTCGAACTAATGCAGTTTAGCAATTTTGTTTTCTTCGACAGTCTTAGATTGCTGTTGTTTTTGTGTCATATTTGAGCAACACCAACAATTTTTCACTCACAACCACCAATGTTTCACTTATCTTAATACATATTTTTTAGATATGATTAATTATATACTAGTAAAACTTGATATTTTTTTTGAGTGTAACATTT

mRNA sequence

GTGGGGTGTAGTGTGTGGGTTAAGAGAACAAACCCATTGGAAGTCCATGTCCATCGGCGGCCCAATCTGGTTACTATATATCATAAACCTAGCTCGTTTAGGGCTTCACTTGGCGGCCGTCGGTATCTGAGTTCTCAAAGTCTCTGCAGCACCCGAGATTTTTAACTAAATCGAAAATGAGTCGAGGAGGTGCAGCCGGTCCCAAGGGGAAGAAGAAGGGAGTAACCTTCACAATCGACTGTTCGAAGCCGGTGGAAGATAAGATTATGGACATTGCTTCTCTGGAAAAGTTTCTTTTGGAGAGGATTAAAGTCGGAGGCAAGGCTGGAGCTCTTGGCGATGCCGTCTCTGTTACTCGTGAGAAGAGTAAAATTACCGTCACTTCTGACAGTAATTTCTCCAAGAGATATTTGAAGTACTTGACCAAGAAGTACCTGAAGAAACACAATGTGCGAGATTGGCTACGAGTGATCGCTGCGAACAAAGATAGGAACGTTTACGAACTCAGGTACTTCAACATTGCCGAGAATGAGGGAGAGGAAGAGGATTAAATTTATGAATTTGACATTGCATTTAAGGAACAAATTATGTCGCAGCAATCTCTCACTGTTTTTGTTACTACTGTTGCTTGTGTGATCCTTTATTTTTTTCATTCGAACTAATGCAGTTTAGCAATTTTGTTTTCTTCGACAGTCTTAGATTGCTGTTGTTTTTGTGTCATATTTGAGCAACACCAACAATTTTTCACTCACAACCACCAATGTTTCACTTATCTTAATACATATTTTTTAGATATGATTAATTATATACTAGTAAAACTTGATATTTTTTTTGAGTGTAACATTT

Coding sequence (CDS)

ATGAGTCGAGGAGGTGCAGCCGGTCCCAAGGGGAAGAAGAAGGGAGTAACCTTCACAATCGACTGTTCGAAGCCGGTGGAAGATAAGATTATGGACATTGCTTCTCTGGAAAAGTTTCTTTTGGAGAGGATTAAAGTCGGAGGCAAGGCTGGAGCTCTTGGCGATGCCGTCTCTGTTACTCGTGAGAAGAGTAAAATTACCGTCACTTCTGACAGTAATTTCTCCAAGAGATATTTGAAGTACTTGACCAAGAAGTACCTGAAGAAACACAATGTGCGAGATTGGCTACGAGTGATCGCTGCGAACAAAGATAGGAACGTTTACGAACTCAGGTACTTCAACATTGCCGAGAATGAGGGAGAGGAAGAGGATTAA

Protein sequence

MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
Homology
[Close]
BLAST of Cp4.1LG04g00400 vs. Swiss-Prot
Match: RL222_ARATH (60S ribosomal protein L22-2 OS=Arabidopsis thaliana GN=RPL22B PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.0e-56
Identity = 111/124 (89.52%), Postives = 119/124 (95.97%), Query Frame = 1 

Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++T
Sbjct: 1   MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENEG
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]
BLAST of Cp4.1LG04g00400 vs. Swiss-Prot
Match: RL223_ARATH (60S ribosomal protein L22-3 OS=Arabidopsis thaliana GN=RPL22C PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 9.8e-56
Identity = 110/124 (88.71%), Postives = 117/124 (94.35%), Query Frame = 1 

Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRG AA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+VS+T
Sbjct: 1   MSRGNAAAAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSIT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENE 
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEA 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]
BLAST of Cp4.1LG04g00400 vs. Swiss-Prot
Match: RL221_ARATH (Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana GN=RPL22A PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.3e-39
Identity = 85/126 (67.46%), Postives = 104/126 (82.54%), Query Frame = 1 

Query: 1   MSRGGA--AGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           M+R GA  +G   KKKGV+F IDCSKPV+D I++IA+LEKFL ERIKV GKAGALG++VS
Sbjct: 1   MARVGAKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVS 60

Query: 61  VTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAEN 120
           +TR   KI V ++SNFSKRYLKYLTKKYLKK+N+RDWLRVIA+NKD+NVYE+RYF I + 
Sbjct: 61  ITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDE 120

Query: 121 EGEEED 125
               E+
Sbjct: 121 VASYEE 126

[Close]
BLAST of Cp4.1LG04g00400 vs. Swiss-Prot
Match: RL22_ICTPU (60S ribosomal protein L22 OS=Ictalurus punctatus GN=rpl22 PE=2 SV=3)

HSP 1 Score: 142.5 bits (358), Expect = 3.1e-33
Identity = 79/125 (63.20%), Postives = 94/125 (75.20%), Query Frame = 1 

Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAV-SV 60
           + +    G K KK+ + FT+DC+ PVED IMD A+ E+FL ERIKV GKAG LG  V S+
Sbjct: 4   LKKPAVKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVSI 63

Query: 61  TREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENE 120
            R KSKITVTSD  FSKRYLKYLTKKYLKK+N+RDWLRV+A  K+   YELRYF I ++E
Sbjct: 64  ERSKSKITVTSDIPFSKRYLKYLTKKYLKKNNLRDWLRVVANTKES--YELRYFQINQDE 123

Query: 121 GEEED 125
            EEED
Sbjct: 124 EEEED 126

[Close]
BLAST of Cp4.1LG04g00400 vs. Swiss-Prot
Match: RL22_RAT (60S ribosomal protein L22 OS=Rattus norvegicus GN=Rpl22 PE=2 SV=2)

HSP 1 Score: 142.1 bits (357), Expect = 4.0e-33
Identity = 78/120 (65.00%), Postives = 94/120 (78.33%), Query Frame = 1 

Query: 6   AAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAV-SVTREKS 65
           A G K KK+ + FT+DC+ PVED IMD A+ E+FL ERIKV GKAG LG  V ++ R KS
Sbjct: 9   AKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKS 68

Query: 66  KITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 125
           KITVTS+  FSKRYLKYLTKKYLKK+N+RDWLRV+A +K+   YELRYF I ++E EEED
Sbjct: 69  KITVTSEEPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126

[Close]
BLAST of Cp4.1LG04g00400 vs. TrEMBL
Match: M5XE65_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013414mg PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 8.7e-59
Identity = 120/124 (96.77%), Postives = 121/124 (97.58%), Query Frame = 1 

Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRG AAGPKGKKKGVTFTIDC KPVEDKIMDIASLEKFL ERIKVGGKAGALGDAVSVT
Sbjct: 1   MSRGAAAGPKGKKKGVTFTIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]
BLAST of Cp4.1LG04g00400 vs. TrEMBL
Match: G7KXJ9_MEDTR (Ribosomal L22e family protein OS=Medicago truncatula GN=MTR_7g112770 PE=2 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.8e-56
Identity = 115/124 (92.74%), Postives = 120/124 (96.77%), Query Frame = 1 

Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRG AAG KGKKKG TFTIDC+KPVEDKIMDIASLEKFL ERIKVGGKAGALGD+VSVT
Sbjct: 1   MSRGSAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDR++YELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]
BLAST of Cp4.1LG04g00400 vs. TrEMBL
Match: A0A067JW95_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13938 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 4.0e-56
Identity = 114/124 (91.94%), Postives = 119/124 (95.97%), Query Frame = 1 

Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRG AAG KGKKKG TF IDC+KPVEDKIMDIASLEKFL ERIKVGGKAGALGD+++VT
Sbjct: 1   MSRGAAAGAKGKKKGATFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSITVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]
BLAST of Cp4.1LG04g00400 vs. TrEMBL
Match: A5CBL0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g02310 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 4.0e-56
Identity = 115/124 (92.74%), Postives = 118/124 (95.16%), Query Frame = 1 

Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRG AAG KGKKKG TFTIDC KPVEDKIMDIASLEKFL ERIKVGGKAGALGD V+VT
Sbjct: 1   MSRGSAAGAKGKKKGATFTIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTS+SNFSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSESNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]
BLAST of Cp4.1LG04g00400 vs. TrEMBL
Match: I3T8K2_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 4.0e-56
Identity = 115/124 (92.74%), Postives = 120/124 (96.77%), Query Frame = 1 

Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGG AG KGKKK V+FTIDC+KPVEDKIMDIASLEKFL ERIKVGGKAGALGDAV+VT
Sbjct: 1   MSRGGVAGAKGKKKSVSFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVTVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDR+VYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]
BLAST of Cp4.1LG04g00400 vs. TAIR10
Match: AT3G05560.1 (AT3G05560.1 Ribosomal L22e protein family)

HSP 1 Score: 219.5 bits (558), Expect = 1.1e-57
Identity = 111/124 (89.52%), Postives = 119/124 (95.97%), Query Frame = 1 

Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++T
Sbjct: 1   MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENEG
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]
BLAST of Cp4.1LG04g00400 vs. TAIR10
Match: AT5G27770.1 (AT5G27770.1 Ribosomal L22e protein family)

HSP 1 Score: 217.2 bits (552), Expect = 5.5e-57
Identity = 110/124 (88.71%), Postives = 117/124 (94.35%), Query Frame = 1 

Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRG AA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+VS+T
Sbjct: 1   MSRGNAAAAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSIT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENE 
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEA 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]
BLAST of Cp4.1LG04g00400 vs. TAIR10
Match: AT1G02830.1 (AT1G02830.1 Ribosomal L22e protein family)

HSP 1 Score: 163.7 bits (413), Expect = 7.3e-41
Identity = 85/126 (67.46%), Postives = 104/126 (82.54%), Query Frame = 1 

Query: 1   MSRGGA--AGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           M+R GA  +G   KKKGV+F IDCSKPV+D I++IA+LEKFL ERIKV GKAGALG++VS
Sbjct: 1   MARVGAKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVS 60

Query: 61  VTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAEN 120
           +TR   KI V ++SNFSKRYLKYLTKKYLKK+N+RDWLRVIA+NKD+NVYE+RYF I + 
Sbjct: 61  ITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDE 120

Query: 121 EGEEED 125
               E+
Sbjct: 121 VASYEE 126

[Close]
BLAST of Cp4.1LG04g00400 vs. NCBI nr
Match: gi|449435649|ref|XP_004135607.1| (PREDICTED: 60S ribosomal protein L22-2 [Cucumis sativus])

HSP 1 Score: 240.4 bits (612), Expect = 1.7e-60
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 1 

Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]
BLAST of Cp4.1LG04g00400 vs. NCBI nr
Match: gi|596011187|ref|XP_007218604.1| (hypothetical protein PRUPE_ppa013414mg [Prunus persica])

HSP 1 Score: 234.2 bits (596), Expect = 1.2e-58
Identity = 120/124 (96.77%), Postives = 121/124 (97.58%), Query Frame = 1 

Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRG AAGPKGKKKGVTFTIDC KPVEDKIMDIASLEKFL ERIKVGGKAGALGDAVSVT
Sbjct: 1   MSRGAAAGPKGKKKGVTFTIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]
BLAST of Cp4.1LG04g00400 vs. NCBI nr
Match: gi|657949484|ref|XP_008343318.1| (PREDICTED: 60S ribosomal protein L22-3 [Malus domestica])

HSP 1 Score: 232.3 bits (591), Expect = 4.7e-58
Identity = 119/124 (95.97%), Postives = 121/124 (97.58%), Query Frame = 1 

Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRG AAGPKGKKKGVTFTIDC KPVEDKIMDIASLEKFL ERIKVGGKAGALGDAVSVT
Sbjct: 1   MSRGTAAGPKGKKKGVTFTIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRNVYELRYFNIA+NEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIADNEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]
BLAST of Cp4.1LG04g00400 vs. NCBI nr
Match: gi|694420389|ref|XP_009338107.1| (PREDICTED: 60S ribosomal protein L22-3 [Pyrus x bretschneideri])

HSP 1 Score: 228.0 bits (580), Expect = 8.9e-57
Identity = 119/125 (95.20%), Postives = 121/125 (96.80%), Query Frame = 1 

Query: 1   MSRG-GAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSV 60
           MSRG  AAGPKGKKKGVTFTIDC KPVEDKIMDIASLEKFL ERIKVGGKAGALGDAVSV
Sbjct: 1   MSRGTAAAGPKGKKKGVTFTIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVSV 60

Query: 61  TREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENE 120
           TREKSKITV+SDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRNVYELRYFNIAENE
Sbjct: 61  TREKSKITVSSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENE 120

Query: 121 GEEED 125
           GEEED
Sbjct: 121 GEEED 125

[Close]
BLAST of Cp4.1LG04g00400 vs. NCBI nr
Match: gi|1009116803|ref|XP_015874973.1| (PREDICTED: 60S ribosomal protein L22-2 [Ziziphus jujuba])

HSP 1 Score: 227.3 bits (578), Expect = 1.5e-56
Identity = 114/124 (91.94%), Postives = 120/124 (96.77%), Query Frame = 1 

Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRG AAGPKGKKKG TFTIDCSKPVEDKIMDIASLEKFL ERIKVGGKAGALG+ V+VT
Sbjct: 1   MSRGSAAGPKGKKKGATFTIDCSKPVEDKIMDIASLEKFLQERIKVGGKAGALGETVTVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REK+KITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAENEG
Sbjct: 61  REKNKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEG 120

Query: 121 EEED 125
           E+ED
Sbjct: 121 EDED 124

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g00400 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL222_ARATH2.0e-5689.5260S ribosomal protein L22-2 OS=Arabidopsis thaliana GN=RPL22B PE=2 SV=1[more]
RL223_ARATH9.8e-5688.7160S ribosomal protein L22-3 OS=Arabidopsis thaliana GN=RPL22C PE=2 SV=1[more]
RL221_ARATH1.3e-3967.46Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana GN=RPL22A PE=3 SV=1[more]
RL22_ICTPU3.1e-3363.2060S ribosomal protein L22 OS=Ictalurus punctatus GN=rpl22 PE=2 SV=3[more]
RL22_RAT4.0e-3365.0060S ribosomal protein L22 OS=Rattus norvegicus GN=Rpl22 PE=2 SV=2[more]
BLAST of Cp4.1LG04g00400 vs. TrEMBL
Match NameE-valueIdentityDescription
M5XE65_PRUPE8.7e-5996.77Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013414mg PE=4 SV=1[more]
G7KXJ9_MEDTR1.8e-5692.74Ribosomal L22e family protein OS=Medicago truncatula GN=MTR_7g112770 PE=2 SV=1[more]
A0A067JW95_JATCU4.0e-5691.94Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13938 PE=4 SV=1[more]
A5CBL0_VITVI4.0e-5692.74Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g02310 PE=4 SV=... [more]
I3T8K2_LOTJA4.0e-5692.74Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
BLAST of Cp4.1LG04g00400 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G05560.11.1e-5789.52 Ribosomal L22e protein family[more]
AT5G27770.15.5e-5788.71 Ribosomal L22e protein family[more]
AT1G02830.17.3e-4167.46 Ribosomal L22e protein family[more]
BLAST of Cp4.1LG04g00400 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435649|ref|XP_004135607.1|1.7e-6099.19PREDICTED: 60S ribosomal protein L22-2 [Cucumis sativus][more]
gi|596011187|ref|XP_007218604.1|1.2e-5896.77hypothetical protein PRUPE_ppa013414mg [Prunus persica][more]
gi|657949484|ref|XP_008343318.1|4.7e-5895.97PREDICTED: 60S ribosomal protein L22-3 [Malus domestica][more]
gi|694420389|ref|XP_009338107.1|8.9e-5795.20PREDICTED: 60S ribosomal protein L22-3 [Pyrus x bretschneideri][more]
gi|1009116803|ref|XP_015874973.1|1.5e-5691.94PREDICTED: 60S ribosomal protein L22-2 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR002671Ribosomal_L22e
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g00400.1Cp4.1LG04g00400.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002671Ribosomal protein L22ePANTHERPTHR1006460S RIBOSOMAL PROTEIN L22coord: 1..124
score: 5.5
IPR002671Ribosomal protein L22ePFAMPF01776Ribosomal_L22ecoord: 14..122
score: 1.6
NoneNo IPR availablePANTHERPTHR10064:SF3SUBFAMILY NOT NAMEDcoord: 1..124
score: 5.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g00400Cucsa.181890Cucumber (Gy14) v1cgycpeB0500
Cp4.1LG04g00400CmaCh10G011220Cucurbita maxima (Rimu)cmacpeB089
Cp4.1LG04g00400CmaCh11G011410Cucurbita maxima (Rimu)cmacpeB147
Cp4.1LG04g00400CmoCh10G012010Cucurbita moschata (Rifu)cmocpeB065
Cp4.1LG04g00400CmoCh11G011840Cucurbita moschata (Rifu)cmocpeB127
Cp4.1LG04g00400Csa1G569380Cucumber (Chinese Long) v2cpecuB656
Cp4.1LG04g00400MELO3C015304Melon (DHL92) v3.5.1cpemeB622
Cp4.1LG04g00400CSPI01G26440Wild cucumber (PI 183967)cpecpiB659
Cp4.1LG04g00400Lsi06G001100Bottle gourd (USVL1VR-Ls)cpelsiB564
Cp4.1LG04g00400MELO3C015304.2Melon (DHL92) v3.6.1cpemedB735
Cp4.1LG04g00400CsaV3_1G038800Cucumber (Chinese Long) v3cpecucB0817
Cp4.1LG04g00400Bhi02G001728Wax gourdcpewgoB0904
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG04g00400Cp4.1LG18g00450Cucurbita pepo (Zucchini)cpecpeB366
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g00400Watermelon (Charleston Gray)cpewcgB600
Cp4.1LG04g00400Watermelon (97103) v1cpewmB643
Cp4.1LG04g00400Cucumber (Gy14) v2cgybcpeB129
Cp4.1LG04g00400Silver-seed gourdcarcpeB0347