Bhi02G001728 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi02G001728
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	60S ribosomal protein L22-like
Location	chr2 : 56603384 .. 56605687 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTGAAGCCCAAGTCCATCAGTGGCCCAGTCTGTTGTTCCTATATAATATAAACCCTAGCTCGTTTAGGGCTTCACTGGGCGGCCGTCGATTTCCAAATCCTCAACTTCTCTTCAGCAACTGGTATTCTCTCTTCCTCGCTAATATATTGATATCTTGATCCGATGCTCGTTTCTATACTTCAATACATTGCTTTTTCTCTCTCTCTGTAGAGAAATTTTTGATCGAAAATGAGTCGAGGAGGTGCAGCCGGTCCCAAGGGGAAGAAGAAGGGAGTAACCTTCACAATCGACTGTTCGAAGCCGGTGGAAGATAAGATTATGGACATTGCTTCGTTGGAGAAGTTTCTTCTTGAGAGGATTAAAGTCGGAGGCAAGGCTGGAGCTCTTGGTGATGCCGTCTCTGTTACACGCGAGAAGAGTAAAATTACCGTCACTTCTGACAGTAACTTCTCCAAGAGGTATACATTTTCCCCCTTTTAAATCAATGGCTTCTTCTGAATCAATTTTGCGGCTCAGAAGTTGTATTTTGAATGTGGGTTTTGTATATGAAGTTTGTATTGCGGTGCGAGTTGAAAATATAAAAACGGCTCACTAGATTGAAGATTTGTTACTTGTTAGTGTCCTGAATGTTTACAAAATCTGTGTTCTTGTGAGGTAAATCAATATGATGCATTTGGAATTTGCCTGGGGTATTTTAAATTTGTTATGGTAAGGGTAAAATTTGGCTTCTTATGTTTGATGCTTGTTCGAATGCACTGAATTCCATTTGTAGAATGAGGGTGCACATGTGGGCCGAGTAATCGATTATAATATTAGACTTGTTATGTTTGATTTTTGTTCTTGGTAACGAACTCGATTGAGTACTGAATTCCAAATGGAATTCCTGTAGTTGACATGATGACTACTTTGATTTACCCTTACACGCTTTGAGAGTTCTGATTATGAAATTTATAGGCAGTTTTATTTTATTATATTTGTGGACTGTGGGACAGAATAGGCTATTCATATTGGAAAATTGGTTGGTAGTTCCCGTCCACTCTTGTATCAGAAACACAGCTCTACGCTCTTGTTATGTTTACTTAAAGTGCTCATTGCATAGCTTTGTTTGTGAATGTGAGGCACTAATAGAAATAGAATATTGTGCGAGTAATTTGTTCTTTAGAGTCAATTATCCAGCTTAATATATGTGCATTTTTGACAATGTATTAATGTGAGCTCACGGTTCTAATGATTTATGGTTTGGTATTGATTTCGTTATTTAGCTCATTTCCCTTCTTCCTGTTCCCTAGGAATCAACTTGGTCGTAAAATAAACTGATTTTGTCGTAGAATTGACACTGTGCATTGAGTTGATTGACGTGGACCGGTTGATAGATTTATGTCATGGTTTCTGATTTGAACTATATTTTTCTTCCAACAGGTGAAGATATAGGTACTTCTTTATGATAGAAATATATAGTAGTTCACTAATCACACAGCCTATTTTACTCATCGGTGATGTATGGTTGTAGAAATTTAATATCTGAATCGTATTAGTTTATTCATTTTCTCTTTGAACATTTAACATTAGTCATTAGTCATTTAGGCTGAGTTGTTAACTCTCTACACCTTGTTTTGGCCCAACCTTAAACCGGATCCACAGCTGAAAACATCTATTAGACAACTCAATAAATTCTTACATTGTGAGCTCCAAACTAAACAATTCTTTGGACTTAACAACTCTCTAGACATAATATCTCCACTCCTTGTCCCAAAGACTTCCTTAGGCCTTTGTGATCTTCACTGAACTCTTTCTTCTAAAAATTACTTCAGGTAAGGGAAATGAATCGACTGATTTAACTTGTGTCTGTCTGGTTAGGTATTTGAAGTACTTGACAAAGAAATACCTGAAGAAACACAACGTGCGGGATTGGCTGCGAGTGATTGCTGCCAACAAGGACAGGAATGTTTACGAACTCAGGTACTTCAACATTGCCGAGAATGAGGGAGAGGAAGAGGATTAAATTTATCAATTCAGACATTGCATTCAAGGAACAAGTGCGTCTCTATGTCGCCGGAGTCTCTCCCTGTTTTTGTTACTGGTGTTGACTGTGTGATGCTCTATTTTTATTCGAACTAATGCAGTTTAGCAATTTTGTTTTTCTTTGACAGACTTAGATTGCTGTTATTTTTTTGTCATATTTGAGTAAGACCAACAAATTCAGTTTAATCAAATCACCCATGTTTCTCACAATCTCATGAAATCTAGGTGGGAGAATATAATATTTATTTAACCAAAATTTTGAATTTGCATTTTCTAATAC

mRNA sequence

CTTTGAAGCCCAAGTCCATCAGTGGCCCAGTCTGTTGTTCCTATATAATATAAACCCTAGCTCGTTTAGGGCTTCACTGGGCGGCCGTCGATTTCCAAATCCTCAACTTCTCTTCAGCAACTGAGAAATTTTTGATCGAAAATGAGTCGAGGAGGTGCAGCCGGTCCCAAGGGGAAGAAGAAGGGAGTAACCTTCACAATCGACTGTTCGAAGCCGGTGGAAGATAAGATTATGGACATTGCTTCGTTGGAGAAGTTTCTTCTTGAGAGGATTAAAGTCGGAGGCAAGGCTGGAGCTCTTGGTGATGCCGTCTCTGTTACACGCGAGAAGAGTAAAATTACCGTCACTTCTGACAGTAACTTCTCCAAGAGGTATTTGAAGTACTTGACAAAGAAATACCTGAAGAAACACAACGTGCGGGATTGGCTGCGAGTGATTGCTGCCAACAAGGACAGGAATGTTTACGAACTCAGGTACTTCAACATTGCCGAGAATGAGGGAGAGGAAGAGGATTAAATTTATCAATTCAGACATTGCATTCAAGGAACAAGTGCGTCTCTATGTCGCCGGAGTCTCTCCCTGTTTTTGTTACTGGTGTTGACTGTGTGATGCTCTATTTTTATTCGAACTAATGCAGTTTAGCAATTTTGTTTTTCTTTGACAGACTTAGATTGCTGTTATTTTTTTGTCATATTTGAGTAAGACCAACAAATTCAGTTTAATCAAATCACCCATGTTTCTCACAATCTCATGAAATCTAGGTGGGAGAATATAATATTTATTTAACCAAAATTTTGAATTTGCATTTTCTAATAC

Coding sequence (CDS)

ATGAGTCGAGGAGGTGCAGCCGGTCCCAAGGGGAAGAAGAAGGGAGTAACCTTCACAATCGACTGTTCGAAGCCGGTGGAAGATAAGATTATGGACATTGCTTCGTTGGAGAAGTTTCTTCTTGAGAGGATTAAAGTCGGAGGCAAGGCTGGAGCTCTTGGTGATGCCGTCTCTGTTACACGCGAGAAGAGTAAAATTACCGTCACTTCTGACAGTAACTTCTCCAAGAGGTATTTGAAGTACTTGACAAAGAAATACCTGAAGAAACACAACGTGCGGGATTGGCTGCGAGTGATTGCTGCCAACAAGGACAGGAATGTTTACGAACTCAGGTACTTCAACATTGCCGAGAATGAGGGAGAGGAAGAGGATTAA

Protein sequence

MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED

Homology

[Close]

BLAST of Bhi02G001728 vs. Swiss-Prot
Match: sp|Q9M9W1|RL222_ARATH (60S ribosomal protein L22-2 OS=Arabidopsis thaliana OX=3702 GN=RPL22B PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.0e-56
Identity = 111/124 (89.52%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++T
Sbjct: 1   MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENEG
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Bhi02G001728 vs. Swiss-Prot
Match: sp|Q9FE58|RL223_ARATH (60S ribosomal protein L22-3 OS=Arabidopsis thaliana OX=3702 GN=RPL22C PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.0e-55
Identity = 110/124 (88.71%), Postives = 117/124 (94.35%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRG AA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+VS+T
Sbjct: 1   MSRGNAAAAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSIT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENE 
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEA 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Bhi02G001728 vs. Swiss-Prot
Match: sp|Q9SRX7|RL221_ARATH (Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana OX=3702 GN=RPL22A PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.3e-39
Identity = 85/126 (67.46%), Postives = 104/126 (82.54%), Query Frame = 0


Query: 1   MSRGGA--AGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           M+R GA  +G   KKKGV+F IDCSKPV+D I++IA+LEKFL ERIKV GKAGALG++VS
Sbjct: 1   MARVGAKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVS 60

Query: 61  VTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAEN 120
           +TR   KI V ++SNFSKRYLKYLTKKYLKK+N+RDWLRVIA+NKD+NVYE+RYF I + 
Sbjct: 61  ITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDE 120

Query: 121 EGEEED 125
               E+
Sbjct: 121 VASYEE 126

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BLAST of Bhi02G001728 vs. Swiss-Prot
Match: sp|P13732|RL22_TRIGR (60S ribosomal protein L22 OS=Tripneustes gratilla OX=7673 GN=RPL22 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.6e-32
Identity = 77/124 (62.10%), Postives = 94/124 (75.81%), Query Frame = 0


Query: 3   RGGAAGPKGKKKGVT--FTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 62
           +GG    KGKKK  T  FTIDC+ PVED IMD ++ E+FL ERIKV GK   L   + + 
Sbjct: 8   KGGRPSGKGKKKKQTLKFTIDCTLPVEDGIMDASNFEQFLQERIKVNGKTKNLTTNIVIE 67

Query: 63  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 122
           R+KSK+TVTS+  FSKRYLKYLTKKYLKK+N+RDWLRV+AANK+   YELRYF I +++ 
Sbjct: 68  RKKSKVTVTSEIAFSKRYLKYLTKKYLKKNNLRDWLRVVAANKES--YELRYFQINQDDE 127

Query: 123 EEED 125
           EEED
Sbjct: 128 EEED 129

[Close]

BLAST of Bhi02G001728 vs. Swiss-Prot
Match: sp|Q90YU6|RL22_ICTPU (60S ribosomal protein L22 OS=Ictalurus punctatus OX=7998 GN=rpl22 PE=2 SV=3)

HSP 1 Score: 137.1 bits (344), Expect = 1.3e-31
Identity = 75/120 (62.50%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDAVSV 60
           + +    G K KK+ + FT+DC+ PVED IMD A+ E+FL ERIKV GKAG L G  VS+
Sbjct: 4   LKKPAVKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVSI 63

Query: 61  TREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENE 120
            R KSKITVTSD  FSKRYLKYLTKKYLKK+N+RDWLRV+A  K+   YELRYF I ++E
Sbjct: 64  ERSKSKITVTSDIPFSKRYLKYLTKKYLKKNNLRDWLRVVANTKES--YELRYFQINQDE 121

[Close]

BLAST of Bhi02G001728 vs. TAIR10
Match: AT3G05560.1 (Ribosomal L22e protein family)

HSP 1 Score: 219.5 bits (558), Expect = 1.1e-57
Identity = 111/124 (89.52%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++T
Sbjct: 1   MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENEG
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Bhi02G001728 vs. TAIR10
Match: AT5G27770.1 (Ribosomal L22e protein family)

HSP 1 Score: 217.2 bits (552), Expect = 5.5e-57
Identity = 110/124 (88.71%), Postives = 117/124 (94.35%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRG AA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+VS+T
Sbjct: 1   MSRGNAAAAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSIT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENE 
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEA 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Bhi02G001728 vs. TAIR10
Match: AT1G02830.1 (Ribosomal L22e protein family)

HSP 1 Score: 163.7 bits (413), Expect = 7.3e-41
Identity = 85/126 (67.46%), Postives = 104/126 (82.54%), Query Frame = 0


Query: 1   MSRGGA--AGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           M+R GA  +G   KKKGV+F IDCSKPV+D I++IA+LEKFL ERIKV GKAGALG++VS
Sbjct: 1   MARVGAKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVS 60

Query: 61  VTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAEN 120
           +TR   KI V ++SNFSKRYLKYLTKKYLKK+N+RDWLRVIA+NKD+NVYE+RYF I + 
Sbjct: 61  ITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDE 120

Query: 121 EGEEED 125
               E+
Sbjct: 121 VASYEE 126

[Close]

BLAST of Bhi02G001728 vs. TrEMBL
Match: tr|A0A1S3BQA5|A0A1S3BQA5_CUCME (60S ribosomal protein L22-2 OS=Cucumis melo OX=3656 GN=LOC103492158 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.2e-60
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Bhi02G001728 vs. TrEMBL
Match: tr|M5XE65|M5XE65_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G144300 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.6e-58
Identity = 120/124 (96.77%), Postives = 121/124 (97.58%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRG AAGPKGKKKGVTFTIDC KPVEDKIMDIASLEKFL ERIKVGGKAGALGDAVSVT
Sbjct: 1   MSRGAAAGPKGKKKGVTFTIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Bhi02G001728 vs. TrEMBL
Match: tr|A0A2N9H113|A0A2N9H113_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33203 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.1e-56
Identity = 116/124 (93.55%), Postives = 121/124 (97.58%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRG AA PKGKKKGV+FT+DC+KPVEDKIMDIASLEKFL ERIKVGGKAGALGDAV+VT
Sbjct: 1   MSRGSAAVPKGKKKGVSFTVDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVTVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Bhi02G001728 vs. TrEMBL
Match: tr|A0A2P5BTK9|A0A2P5BTK9_9ROSA (Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_309410 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.1e-56
Identity = 116/124 (93.55%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRG AA PKGKKKG TFTIDC KPVEDKIMDIASLEKFL ERIKVGGKAGALGD+V+VT
Sbjct: 1   MSRGSAAAPKGKKKGATFTIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Bhi02G001728 vs. TrEMBL
Match: tr|A0A1U8ABQ4|A0A1U8ABQ4_NELNU (60S ribosomal protein L22-2 OS=Nelumbo nucifera OX=4432 GN=LOC104598935 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.0e-56
Identity = 114/124 (91.94%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRG A GPKGKKKGVTFTIDC+KPVEDKIMDIASLEKFL ERIKVGGKAGALGD+++V 
Sbjct: 1   MSRGSATGPKGKKKGVTFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSITVA 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           R+KSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRNVYELRYFNIAENEG
Sbjct: 61  RDKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Bhi02G001728 vs. NCBI nr
Match: XP_022146066.1 (60S ribosomal protein L22-2 [Momordica charantia] >XP_022933854.1 60S ribosomal protein L22-2 [Cucurbita moschata] >XP_022970154.1 60S ribosomal protein L22-2 [Cucurbita maxima] >XP_023530293.1 60S ribosomal protein L22-2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.5 bits (615), Expect = 1.5e-60
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Bhi02G001728 vs. NCBI nr
Match: XP_004135607.1 (PREDICTED: 60S ribosomal protein L22-2 [Cucumis sativus] >XP_008450627.1 PREDICTED: 60S ribosomal protein L22-2 [Cucumis melo])

HSP 1 Score: 240.4 bits (612), Expect = 3.4e-60
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Bhi02G001728 vs. NCBI nr
Match: XP_022961443.1 (60S ribosomal protein L22-2-like [Cucurbita moschata] >XP_022968816.1 60S ribosomal protein L22-2-like [Cucurbita maxima] >XP_023515962.1 60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.4 bits (612), Expect = 3.4e-60
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAAGPKGKKKGVTFTIDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Bhi02G001728 vs. NCBI nr
Match: XP_007218604.1 (60S ribosomal protein L22-3 [Prunus persica] >XP_008232650.1 PREDICTED: 60S ribosomal protein L22-3 [Prunus mume] >XP_021805005.1 60S ribosomal protein L22-3 [Prunus avium] >XP_021805012.1 60S ribosomal protein L22-3 [Prunus avium] >ONI22680.1 hypothetical protein PRUPE_2G144300 [Prunus persica] >PQQ17756.1 60S ribosomal protein L22-3 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 234.2 bits (596), Expect = 2.4e-58
Identity = 120/124 (96.77%), Postives = 121/124 (97.58%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRG AAGPKGKKKGVTFTIDC KPVEDKIMDIASLEKFL ERIKVGGKAGALGDAVSVT
Sbjct: 1   MSRGAAAGPKGKKKGVTFTIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Bhi02G001728 vs. NCBI nr
Match: XP_008343318.1 (PREDICTED: 60S ribosomal protein L22-3 [Malus domestica])

HSP 1 Score: 232.3 bits (591), Expect = 9.2e-58
Identity = 119/124 (95.97%), Postives = 121/124 (97.58%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRG AAGPKGKKKGVTFTIDC KPVEDKIMDIASLEKFL ERIKVGGKAGALGDAVSVT
Sbjct: 1   MSRGTAAGPKGKKKGVTFTIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRNVYELRYFNIA+NEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIADNEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

The following BLAST results are available for this feature:

BLAST of Bhi02G001728 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M9W1\|RL222_ARATH	2.0e-56	89.52	60S ribosomal protein L22-2 OS=Arabidopsis thaliana OX=3702 GN=RPL22B PE=2 SV=1	[more]
sp\|Q9FE58\|RL223_ARATH	1.0e-55	88.71	60S ribosomal protein L22-3 OS=Arabidopsis thaliana OX=3702 GN=RPL22C PE=2 SV=1	[more]
sp\|Q9SRX7\|RL221_ARATH	1.3e-39	67.46	Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana OX=3702 GN=RPL22A P...	[more]
sp\|P13732\|RL22_TRIGR	1.6e-32	62.10	60S ribosomal protein L22 OS=Tripneustes gratilla OX=7673 GN=RPL22 PE=2 SV=1	[more]
sp\|Q90YU6\|RL22_ICTPU	1.3e-31	62.50	60S ribosomal protein L22 OS=Ictalurus punctatus OX=7998 GN=rpl22 PE=2 SV=3	[more]

BLAST of Bhi02G001728 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G05560.1	1.1e-57	89.52	Ribosomal L22e protein family	[more]
AT5G27770.1	5.5e-57	88.71	Ribosomal L22e protein family	[more]
AT1G02830.1	7.3e-41	67.46	Ribosomal L22e protein family	[more]

BLAST of Bhi02G001728 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BQA5\|A0A1S3BQA5_CUCME	2.2e-60	99.19	60S ribosomal protein L22-2 OS=Cucumis melo OX=3656 GN=LOC103492158 PE=4 SV=1	[more]
tr\|M5XE65\|M5XE65_PRUPE	1.6e-58	96.77	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G144300 PE=4 SV=1	[more]
tr\|A0A2N9H113\|A0A2N9H113_FAGSY	1.1e-56	93.55	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33203 PE=4 SV=1	[more]
tr\|A0A2P5BTK9\|A0A2P5BTK9_9ROSA	1.1e-56	93.55	Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_309410 PE=4 SV=1	[more]
tr\|A0A1U8ABQ4\|A0A1U8ABQ4_NELNU	2.0e-56	91.94	60S ribosomal protein L22-2 OS=Nelumbo nucifera OX=4432 GN=LOC104598935 PE=4 SV=...	[more]

BLAST of Bhi02G001728 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146066.1	1.5e-60	100.00	60S ribosomal protein L22-2 [Momordica charantia] >XP_022933854.1 60S ribosomal ...	[more]
XP_004135607.1	3.4e-60	99.19	PREDICTED: 60S ribosomal protein L22-2 [Cucumis sativus] >XP_008450627.1 PREDICT...	[more]
XP_022961443.1	3.4e-60	99.19	60S ribosomal protein L22-2-like [Cucurbita moschata] >XP_022968816.1 60S riboso...	[more]
XP_007218604.1	2.4e-58	96.77	60S ribosomal protein L22-3 [Prunus persica] >XP_008232650.1 PREDICTED: 60S ribo...	[more]
XP_008343318.1	9.2e-58	95.97	PREDICTED: 60S ribosomal protein L22-3 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome
GO:0005622	intracellular

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR038526	Ribosomal_L22e_sf
IPR002671	Ribosomal_L22e

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi02M001728	Bhi02M001728	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002671	Ribosomal protein L22e	PFAM	PF01776	Ribosomal_L22e	coord: 14..122 e-value: 1.6E-46 score: 157.0
IPR002671	Ribosomal protein L22e	PANTHER	PTHR10064	60S RIBOSOMAL PROTEIN L22	coord: 3..124
IPR038526	Ribosomal protein L22e superfamily	GENE3D	G3DSA:3.30.1360.210		coord: 6..124 e-value: 1.8E-51 score: 175.1
None	No IPR available	PANTHER	PTHR10064:SF5	SUBFAMILY NOT NAMED	coord: 3..124

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi02G001728	Csa1G569380	Cucumber (Chinese Long) v2	cuwgoB082
Bhi02G001728	MELO3C015304	Melon (DHL92) v3.5.1	mewgoB294
Bhi02G001728	ClCG03G017380	Watermelon (Charleston Gray)	wcgwgoB364
Bhi02G001728	CSPI01G26440	Wild cucumber (PI 183967)	cpiwgoB084
Bhi02G001728	Cucsa.181890	Cucumber (Gy14) v1	cgywgoB372
Bhi02G001728	CmaCh10G011220	Cucurbita maxima (Rimu)	cmawgoB0090
Bhi02G001728	CmaCh11G011410	Cucurbita maxima (Rimu)	cmawgoB0173
Bhi02G001728	CmoCh11G011840	Cucurbita moschata (Rifu)	cmowgoB0167
Bhi02G001728	CmoCh10G012010	Cucurbita moschata (Rifu)	cmowgoB0084
Bhi02G001728	Lsi06G001100	Bottle gourd (USVL1VR-Ls)	lsiwgoB507
Bhi02G001728	Cp4.1LG18g00450	Cucurbita pepo (Zucchini)	cpewgoB0462
Bhi02G001728	Cp4.1LG04g00400	Cucurbita pepo (Zucchini)	cpewgoB0904
Bhi02G001728	MELO3C015304.2	Melon (DHL92) v3.6.1	medwgoB295
Bhi02G001728	CsaV3_1G038800	Cucumber (Chinese Long) v3	cucwgoB090
Bhi02G001728	Cla005191	Watermelon (97103) v1	wgowmB656
Bhi02G001728	Cla97C03G067750	Watermelon (97103) v2	wgowmbB632

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi02G001728	Cucumber (Gy14) v2	cgybwgoB080
Bhi02G001728	Cucurbita moschata (Rifu)	cmowgoB0164
Bhi02G001728	Silver-seed gourd	carwgoB0314