Cp4.1LG04g00100 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g00100
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLate embryogenesis abundant protein
LocationCp4.1LG04 : 2045964 .. 2048316 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCGTAGAAATCAACGGATGAGAAAAGCACTAAATATTTTCAATCCTTTTGAATTTTCCACATAATAAACCATACGTACTCCCAGAGACTAAGGTTTGAAAACCGAACCGAAATGTCATCGTCCTCTTCCACTTCTAGGCCCCTCCCGAACGCCACTCTCTCAACCTCCACCCACCGCCACCACCCGCCCTACAGCCCCCGATCCTCCTCCTTCTCCTCCGCCTCCTTCAAGGGCTGCTGCTGCTGCCTCTTCCTCCTCCTCTCCTTCCTCGCCCTCCTCGTCCTCGCCGTCGTCCTCGTCGTCGTCCTCGCCCTCAAGCCCAAGAAGCCGCAGTTTGATCTCCAGCAGGTCGGCGTCCAGTACATGGGCATTACCACTCCCAACACTCCCACTACTCCTATGGCTTCCCTTTCCCTCAACATTCGAATGGTTTTCACTGCCGTTAACCCTAACAAGGTCGGGATCAAGTATAGCGAGTCCCGTTTCACTGTTATGTACCGAGGAATCCCCCTCGGTCGAGCCTCTGTTCCTGGATTTGTTCAAGAACCACATAGCCAGCGCCAAGTCGATACCACCGTCGCCGTCGATCGCGTCAATCTCCTCCAAGCCGACGCTGCTGATTTGATCCGTGACGCCTCCTTGAACGACCGTGTTGAGCTCAGAATACTCGGCGATGTCGCCGCTAAGATCCGCCTCTTATCCTTCAATTCCCCCGGCGTTCAGGTACTATACTTACCTTTTTCTTTCTAGGAGATTCAGATTTAGGGACATGGATGTAATTACCTGATTTCTGGTATACCCTTCTGGTCTTCCGCATTTTAATGCTCTGCCATGCCCTGCCATTCCCTGCCATCTGCCCCCTCTGTTCCTCTTGAATTTATTTCTCTTGTGTTATAAATTGGGTGAGTTTGAACCAGAAATGCTGTCAATGTTTTTCGGACTTTTTAATGTTTCTTTTCCTTAATTCTGAAGAACACCTTGTGCATAAGTAGAAAAAGCTTTGAATTCATAATAATTTTGATACACATGAACACAGAAAAGGGTAGAAAACTGGTCTGCTTTGGTTTTGGAAATCAAACAATAAGAGTAGTAGAAGAAGAGATTGAAGAACAAAGAATTTGGCAAGAACTCTTTTATGTTCTTGACTGGATTAGAAAGGATCTGAACTGAACCCCCCATTTTGTAGCTTTAATTGTTTGTTCATAATTGTTTTCATGTCATATTTTAGTCAAGAAATTGAGCTGTGGAGTCTAAAAAGAAAGAGGGAAAGCGACAAGAGAAAGTAGCATCGTTTTCCTTCATATTTGCTTTACTTTCACGCCCATTTTGTAATCTTCCCAATAGCTTTGGCCATAGCTTTTGCTGCAACTCCTTAACGTTATTAGATCACCAAATCATAGCTTTATCCAATGATAGAACCAATTAGATACTCTGATGCATTCGTCAATCCGAACATAGCTATGTATCGATTAGATCTCGGATGAATTCGAGAGGACGTTCGGTGGTAGCGGTGTTTTTAAGTGAAACAGAGGTTCAAACCATACCTTTGAAGTTATACCCACGAGTGCTATTTCGAGTCAGGGTTTGTCTCCGTTATGTTGTTGCTAGCAAATACCACTATGTTTTGTTTCGATACTCTCCGTACACTTTCTTTTCTGATCCTTCGATAAAAAGATTCATACCCGGGTGGACAATTGGATCTCGTCTCTCTAGACGAGAAGTAATGGTGACAGCTAATATTGATATCAAAAGGTTGCATTATTTAGGAGATGAAAGGAACCTTTGGATCATTCCTTGCCCCATGTGACTTTTGGATGCATCTCTTCCCATTTCCTATTCTTTTGTTTATAATATTATTCTTTCACTTTCAATTATTTTTACAATGCTTTCCTTTTCTTCTCCTTCTGGGATTGTTCAGGTTTCAGTGGATTGTGCAATTGTGATCAGTCCAAGGAAGCAGTCTCTTACGTACAAGCAATGTGGTTTTGATGGCTTAAGTGTCTGACTCTCGTCTGTTCGTGTTCCAATTATTTCATTTTGGTCCCTATACGATTTACCAATTCAGTTCCCATCCACAACCACGAGTCAAGATAGAAACGGTTGTGGAATAAGGGACTGGATTGAAATTATGAAGATTTTTTGGAAGGACAAAATTAACGAGAGGATAGCTACTCGGGAAACGATTTGTAGAGAGAGCGATTACTCGAGAGAGAGATTTAGACGAAGAAAATGTAATATTATGAACATTTTTTTACGAGAATATTACGAGAGGCGGGGCTCGACCTTTGAGATGGCAACTTGAAATATAAAATTGATGGGATTTTGGGACTTTATAACTTTTTAAAAGATTT

mRNA sequence

ATTCGTAGAAATCAACGGATGAGAAAAGCACTAAATATTTTCAATCCTTTTGAATTTTCCACATAATAAACCATACGTACTCCCAGAGACTAAGGTTTGAAAACCGAACCGAAATGTCATCGTCCTCTTCCACTTCTAGGCCCCTCCCGAACGCCACTCTCTCAACCTCCACCCACCGCCACCACCCGCCCTACAGCCCCCGATCCTCCTCCTTCTCCTCCGCCTCCTTCAAGGGCTGCTGCTGCTGCCTCTTCCTCCTCCTCTCCTTCCTCGCCCTCCTCGTCCTCGCCGTCGTCCTCGTCGTCGTCCTCGCCCTCAAGCCCAAGAAGCCGCAGTTTGATCTCCAGCAGGTCGGCGTCCAGTACATGGGCATTACCACTCCCAACACTCCCACTACTCCTATGGCTTCCCTTTCCCTCAACATTCGAATGGTTTTCACTGCCGTTAACCCTAACAAGGTCGGGATCAAGTATAGCGAGTCCCGTTTCACTGTTATGTACCGAGGAATCCCCCTCGGTCGAGCCTCTGTTCCTGGATTTGTTCAAGAACCACATAGCCAGCGCCAAGTCGATACCACCGTCGCCGTCGATCGCGTCAATCTCCTCCAAGCCGACGCTGCTGATTTGATCCGTGACGCCTCCTTGAACGACCGTGTTGAGCTCAGAATACTCGGCGATGTCGCCGCTAAGATCCGCCTCTTATCCTTCAATTCCCCCGGCGTTCAGGTTTCAGTGGATTGTGCAATTGTGATCAGTCCAAGGAAGCAGTCTCTTACGTACAAGCAATGTGGTTTTGATGGCTTAAGTGTCTGACTCTCGTCTGTTCGTGTTCCAATTATTTCATTTTGGTCCCTATACGATTTACCAATTCAGTTCCCATCCACAACCACGAGTCAAGATAGAAACGGTTGTGGAATAAGGGACTGGATTGAAATTATGAAGATTTTTTGGAAGGACAAAATTAACGAGAGGATAGCTACTCGGGAAACGATTTGTAGAGAGAGCGATTACTCGAGAGAGAGATTTAGACGAAGAAAATGTAATATTATGAACATTTTTTTACGAGAATATTACGAGAGGCGGGGCTCGACCTTTGAGATGGCAACTTGAAATATAAAATTGATGGGATTTTGGGACTTTATAACTTTTTAAAAGATTT

Coding sequence (CDS)

ATGTCATCGTCCTCTTCCACTTCTAGGCCCCTCCCGAACGCCACTCTCTCAACCTCCACCCACCGCCACCACCCGCCCTACAGCCCCCGATCCTCCTCCTTCTCCTCCGCCTCCTTCAAGGGCTGCTGCTGCTGCCTCTTCCTCCTCCTCTCCTTCCTCGCCCTCCTCGTCCTCGCCGTCGTCCTCGTCGTCGTCCTCGCCCTCAAGCCCAAGAAGCCGCAGTTTGATCTCCAGCAGGTCGGCGTCCAGTACATGGGCATTACCACTCCCAACACTCCCACTACTCCTATGGCTTCCCTTTCCCTCAACATTCGAATGGTTTTCACTGCCGTTAACCCTAACAAGGTCGGGATCAAGTATAGCGAGTCCCGTTTCACTGTTATGTACCGAGGAATCCCCCTCGGTCGAGCCTCTGTTCCTGGATTTGTTCAAGAACCACATAGCCAGCGCCAAGTCGATACCACCGTCGCCGTCGATCGCGTCAATCTCCTCCAAGCCGACGCTGCTGATTTGATCCGTGACGCCTCCTTGAACGACCGTGTTGAGCTCAGAATACTCGGCGATGTCGCCGCTAAGATCCGCCTCTTATCCTTCAATTCCCCCGGCGTTCAGGTTTCAGTGGATTGTGCAATTGTGATCAGTCCAAGGAAGCAGTCTCTTACGTACAAGCAATGTGGTTTTGATGGCTTAAGTGTCTGA

Protein sequence

MSSSSSTSRPLPNATLSTSTHRHHPPYSPRSSSFSSASFKGCCCCLFLLLSFLALLVLAVVLVVVLALKPKKPQFDLQQVGVQYMGITTPNTPTTPMASLSLNIRMVFTAVNPNKVGIKYSESRFTVMYRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV
Homology
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BLAST of Cp4.1LG04g00100 vs. TrEMBL
Match: A0A0A0K5H7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G223380 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 9.7e-96
Identity = 196/228 (85.96%), Postives = 206/228 (90.35%), Query Frame = 1 

Query: 5   SSTSRPLPNATLSTSTHRHHPPYSPRSSSFSSASFKGCCCCLFLLLSFLALLVLAVVLVV 64
           SS+SR +PN          HP Y+PRSSS SSA+FKGCCCCLFLL SFLALLVLA+VLVV
Sbjct: 2   SSSSRTVPNGV--------HPRYNPRSSS-SSATFKGCCCCLFLLFSFLALLVLAIVLVV 61

Query: 65  VLALKPKKPQFDLQQVGVQYMGITTPNTPTTPMASLSLNIRMVFTAVNPNKVGIKYSESR 124
           VLALKPKKPQFDLQQV VQY+GIT PN PTT  ASLSLNIRM+FTAVNPNKVGIKY ESR
Sbjct: 62  VLALKPKKPQFDLQQVKVQYVGITNPN-PTT--ASLSLNIRMIFTAVNPNKVGIKYEESR 121

Query: 125 FTVMYRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDRVELR 184
           FTVMYRGIPLGRASVPGF Q+PHSQRQVD T+AVDRVNLLQADAADLIRDASLNDRVELR
Sbjct: 122 FTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELR 181

Query: 185 ILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 233
           ILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGL+V
Sbjct: 182 ILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 217

[Close]
BLAST of Cp4.1LG04g00100 vs. TrEMBL
Match: A0A061DZ99_THECC (Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 1 OS=Theobroma cacao GN=TCM_006430 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 9.7e-88
Identity = 179/224 (79.91%), Postives = 193/224 (86.16%), Query Frame = 1 

Query: 22  RHHPPYSPRSSSFSSASFKGCCCCLFLLLSFLALLVLAVVLVVVLALKPKKPQFDLQQVG 81
           RHHP Y PRSSS SSASFKGCCCCLFLL SFLALLVLAVVL++VLA+KPKKPQFDLQQVG
Sbjct: 39  RHHP-YYPRSSS-SSASFKGCCCCLFLLFSFLALLVLAVVLIIVLAVKPKKPQFDLQQVG 98

Query: 82  VQYMGITTPN-------------TPTTPMASLSLNIRMVFTAVNPNKVGIKYSESRFTVM 141
           VQYMGI+T N             TPTT  ASLSL I M+FTAVNPNKVGIKY ESRFTVM
Sbjct: 99  VQYMGISTSNPSAFDGAAAAVTTTPTT--ASLSLTIHMLFTAVNPNKVGIKYGESRFTVM 158

Query: 142 YRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDRVELRILGD 201
           YRGIPLG+A+VPGF QE HS R V+ T+AVDR NL+QADAADLIRDASLNDRVELR+LGD
Sbjct: 159 YRGIPLGKAAVPGFFQEAHSTRNVEATIAVDRANLMQADAADLIRDASLNDRVELRVLGD 218

Query: 202 VAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 233
           V AKIR+L F+SPGVQVS+DCAIVISPRKQSLTYKQCGFDGLSV
Sbjct: 219 VGAKIRVLDFDSPGVQVSIDCAIVISPRKQSLTYKQCGFDGLSV 258

[Close]
BLAST of Cp4.1LG04g00100 vs. TrEMBL
Match: F6H1R4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g00370 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 3.1e-86
Identity = 182/239 (76.15%), Postives = 194/239 (81.17%), Query Frame = 1 

Query: 9   RPLPNATLSTSTHRHHPP------YSPRSSSFSSASFKGCCCCLFLLLSFLALLVLAVVL 68
           RP PN       H HHP       Y   S S SSASFKGCCCCLFLL SFLALLVLAVVL
Sbjct: 14  RPPPN-------HHHHPHSQHHSHYQSPSYSPSSASFKGCCCCLFLLFSFLALLVLAVVL 73

Query: 69  VVVLALKPKKPQFDLQQVGVQYMGIT---------TPNTPTTPMASLSLNIRMVFTAVNP 128
           ++VLA+KPKKPQFDLQQVGVQYMGIT         +P TPT+  ASLSLNI+M+FTAVNP
Sbjct: 74  IIVLAVKPKKPQFDLQQVGVQYMGITANPSSTVAGSPPTPTS--ASLSLNIKMLFTAVNP 133

Query: 129 NKVGIKYSESRFTVMYRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIR 188
           NKVGIKY ESRFTVMYRGIPLG+  VPGF Q  HS RQV+TTVAVDR NLLQADAADLI+
Sbjct: 134 NKVGIKYGESRFTVMYRGIPLGKGVVPGFYQPAHSVRQVETTVAVDRANLLQADAADLIK 193

Query: 189 DASLNDRVELRILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 233
           DASLNDRVELRILG+V AKIR+L F SPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV
Sbjct: 194 DASLNDRVELRILGEVGAKIRVLDFTSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 243

[Close]
BLAST of Cp4.1LG04g00100 vs. TrEMBL
Match: M5Y567_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010161mg PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 5.3e-86
Identity = 178/236 (75.42%), Postives = 198/236 (83.90%), Query Frame = 1 

Query: 10  PLPNATLSTSTHRHHPPYSPR--SSSFSSASFKGCCCCLFLLLSFLALLVLAVVLVVVLA 69
           P P  + S   + +H PY P   SSS SSASFKGCCCCLFLL SFLALLVLAVVLV++LA
Sbjct: 26  PRPPPSSSNPHNSNHHPYYPTTSSSSSSSASFKGCCCCLFLLFSFLALLVLAVVLVIILA 85

Query: 70  LKPKKPQFDLQQVGVQYMGITTPN-TPTTPM----------ASLSLNIRMVFTAVNPNKV 129
           +KPKKPQFDLQQVGVQYMGI +PN TP              ASLSL+IRM+F+AVNPNKV
Sbjct: 86  VKPKKPQFDLQQVGVQYMGINSPNPTPAAAATADPNQNPTSASLSLSIRMLFSAVNPNKV 145

Query: 130 GIKYSESRFTVMYRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDAS 189
           GI+Y ESRFTVMYRGIPLG+ASVPGF Q+ H+ RQV  T++VDRVNLLQADAADLIRDAS
Sbjct: 146 GIRYGESRFTVMYRGIPLGKASVPGFFQDAHTVRQVVATISVDRVNLLQADAADLIRDAS 205

Query: 190 LNDRVELRILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 233
           LNDRVELR+LGDV AKIR+L+F+SPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV
Sbjct: 206 LNDRVELRVLGDVGAKIRVLNFDSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 261

[Close]
BLAST of Cp4.1LG04g00100 vs. TrEMBL
Match: K7M9P0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G048800 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 4.5e-85
Identity = 169/216 (78.24%), Postives = 194/216 (89.81%), Query Frame = 1 

Query: 17  STSTHRHHPPYSPRSSSFSSASFKGCCCCLFLLLSFLALLVLAVVLVVVLALKPKKPQFD 76
           S + +R + P +P  SS SSASFKGCCCCLFLL SFLALLVLAVVLV++LA+KPKKPQFD
Sbjct: 48  SYNGYRQYHPRTPGRSSSSSASFKGCCCCLFLLFSFLALLVLAVVLVIILAVKPKKPQFD 107

Query: 77  LQQVGVQYMGITTPNTPTTPMASLSLNIRMVFTAVNPNKVGIKYSESRFTVMYRGIPLGR 136
           L+QVGVQYMGIT PN P+T  ASLSL IR++F A NPNKVGI+Y +S FTVMYRGIPLG+
Sbjct: 108 LEQVGVQYMGIT-PNPPST--ASLSLTIRLLFAATNPNKVGIRYGQSSFTVMYRGIPLGK 167

Query: 137 ASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLL 196
           A+VPGF Q+PHS RQV  T+AVDRVNLLQADAADLIRDASL+DRV+LR+LGDVAAKIR++
Sbjct: 168 ATVPGFFQQPHSTRQVIATIAVDRVNLLQADAADLIRDASLSDRVDLRVLGDVAAKIRVI 227

Query: 197 SFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 233
           +F+SPGVQVSVDCAIVISPRKQSLTYKQCGFDGL+V
Sbjct: 228 NFDSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLTV 260

[Close]
BLAST of Cp4.1LG04g00100 vs. TAIR10
Match: AT2G01080.1 (AT2G01080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 294.3 bits (752), Expect = 6.7e-80
Identity = 152/212 (71.70%), Postives = 179/212 (84.43%), Query Frame = 1 

Query: 22  RHHPPYSPRSSSFSSASFKGCCCCLFLLLSFLALLVLAVVLVVVLALKPKKPQFDLQQVG 81
           ++  PY    SS SSAS KGCCCCLFLL +FLALLVLAVVL+V+LA+KPKKPQFDLQQV 
Sbjct: 20  QNQQPYYRSYSSSSSASLKGCCCCLFLLFAFLALLVLAVVLIVILAVKPKKPQFDLQQVA 79

Query: 82  VQYMGITTPNTPTTPM-ASLSLNIRMVFTAVNPNKVGIKYSESRFTVMYRGIPLGRASVP 141
           V YMGI+ P+    P  ASLSL IRM+FTAVNPNKVGI+Y ES FTVMY+G+PLGRA+VP
Sbjct: 80  VVYMGISNPSAVLDPTTASLSLTIRMLFTAVNPNKVGIRYGESSFTVMYKGMPLGRATVP 139

Query: 142 GFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNS 201
           GF Q+ HS + V+ T++VDRVNL+QA AADL+RDASLNDRVEL + GDV AKIR+++F+S
Sbjct: 140 GFYQDAHSTKNVEATISVDRVNLMQAHAADLVRDASLNDRVELTVRGDVGAKIRVMNFDS 199

Query: 202 PGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 233
           PGVQVSV+C I ISPRKQ+L YKQCGFDGLSV
Sbjct: 200 PGVQVSVNCGIGISPRKQALIYKQCGFDGLSV 231

[Close]
BLAST of Cp4.1LG04g00100 vs. TAIR10
Match: AT3G54200.1 (AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 50.4 bits (119), Expect = 1.7e-06
Identity = 48/216 (22.22%), Postives = 88/216 (40.74%), Query Frame = 1 

Query: 25  PPYSPRSSSFSSASF-----------KGCCCCLFLLLSFLALLVLAVVLVVVLALKPKKP 84
           PP  P +SS  + S            + C  C+   +  + L+ + +V++     KPK+P
Sbjct: 23  PPPKPNASSMETQSANTGTAKKLRRKRNCKICICFTILLILLIAIVIVILAFTLFKPKRP 82

Query: 85  QFDLQQVGVQYMGITTPNTPTTPMASLSLNIRMVFTAVNPNKVGIKYSESRFTVMYRGIP 144
              +  V V  +  +        + +L+LN+ +  +  NPN++G  Y  S   + YRG  
Sbjct: 83  TTTIDSVTVDRLQASVNPLLLKVLLNLTLNVDL--SLKNPNRIGFSYDSSSALLNYRGQV 142

Query: 145 LGRASVPG--FVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDRVELRILGDVAA 204
           +G A +P             +  T+  DR+         L+ D  +   + L     V  
Sbjct: 143 IGEAPLPANRIAARKTVPLNITLTLMADRL----LSETQLLSDV-MAGVIPLNTFVKVTG 202

Query: 205 KIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGF 228
           K+ +L      VQ S  C + IS   +++T + C +
Sbjct: 203 KVTVLKIFKIKVQSSSSCDLSISVSDRNVTSQHCKY 231

[Close]
BLAST of Cp4.1LG04g00100 vs. NCBI nr
Match: gi|659092735|ref|XP_008447191.1| (PREDICTED: uncharacterized protein LOC103489700 isoform X2 [Cucumis melo])

HSP 1 Score: 362.5 bits (929), Expect = 5.7e-97
Identity = 199/231 (86.15%), Postives = 209/231 (90.48%), Query Frame = 1 

Query: 2   SSSSSTSRPLPNATLSTSTHRHHPPYSPRSSSFSSASFKGCCCCLFLLLSFLALLVLAVV 61
           S+ SS+SR +PN          HP Y+PRSSS SSA+FKGCCCCLFLL SFLALLVLA+V
Sbjct: 52  SAMSSSSRTVPNGV--------HPRYNPRSSS-SSATFKGCCCCLFLLFSFLALLVLAIV 111

Query: 62  LVVVLALKPKKPQFDLQQVGVQYMGITTPNTPTTPMASLSLNIRMVFTAVNPNKVGIKYS 121
           LVVVLALKPKKPQFDLQQVGVQYMGIT PN PTT  ASLSLNIRM+FTAVNPNKVGIKY 
Sbjct: 112 LVVVLALKPKKPQFDLQQVGVQYMGITNPN-PTT--ASLSLNIRMIFTAVNPNKVGIKYE 171

Query: 122 ESRFTVMYRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDRV 181
           ESRFTVMYRGIPLGRASVPGF Q+PHSQRQVD T+AVDRVNLLQADAADLIRDASLNDRV
Sbjct: 172 ESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRV 231

Query: 182 ELRILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 233
           ELRILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGL+V
Sbjct: 232 ELRILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 270

[Close]
BLAST of Cp4.1LG04g00100 vs. NCBI nr
Match: gi|449444084|ref|XP_004139805.1| (PREDICTED: uncharacterized protein LOC101207234 [Cucumis sativus])

HSP 1 Score: 357.8 bits (917), Expect = 1.4e-95
Identity = 196/228 (85.96%), Postives = 206/228 (90.35%), Query Frame = 1 

Query: 5   SSTSRPLPNATLSTSTHRHHPPYSPRSSSFSSASFKGCCCCLFLLLSFLALLVLAVVLVV 64
           SS+SR +PN          HP Y+PRSSS SSA+FKGCCCCLFLL SFLALLVLA+VLVV
Sbjct: 2   SSSSRTVPNGV--------HPRYNPRSSS-SSATFKGCCCCLFLLFSFLALLVLAIVLVV 61

Query: 65  VLALKPKKPQFDLQQVGVQYMGITTPNTPTTPMASLSLNIRMVFTAVNPNKVGIKYSESR 124
           VLALKPKKPQFDLQQV VQY+GIT PN PTT  ASLSLNIRM+FTAVNPNKVGIKY ESR
Sbjct: 62  VLALKPKKPQFDLQQVKVQYVGITNPN-PTT--ASLSLNIRMIFTAVNPNKVGIKYEESR 121

Query: 125 FTVMYRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDRVELR 184
           FTVMYRGIPLGRASVPGF Q+PHSQRQVD T+AVDRVNLLQADAADLIRDASLNDRVELR
Sbjct: 122 FTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELR 181

Query: 185 ILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 233
           ILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGL+V
Sbjct: 182 ILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 217

[Close]
BLAST of Cp4.1LG04g00100 vs. NCBI nr
Match: gi|590683364|ref|XP_007041580.1| (Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 1 [Theobroma cacao])

HSP 1 Score: 331.3 bits (848), Expect = 1.4e-87
Identity = 179/224 (79.91%), Postives = 193/224 (86.16%), Query Frame = 1 

Query: 22  RHHPPYSPRSSSFSSASFKGCCCCLFLLLSFLALLVLAVVLVVVLALKPKKPQFDLQQVG 81
           RHHP Y PRSSS SSASFKGCCCCLFLL SFLALLVLAVVL++VLA+KPKKPQFDLQQVG
Sbjct: 39  RHHP-YYPRSSS-SSASFKGCCCCLFLLFSFLALLVLAVVLIIVLAVKPKKPQFDLQQVG 98

Query: 82  VQYMGITTPN-------------TPTTPMASLSLNIRMVFTAVNPNKVGIKYSESRFTVM 141
           VQYMGI+T N             TPTT  ASLSL I M+FTAVNPNKVGIKY ESRFTVM
Sbjct: 99  VQYMGISTSNPSAFDGAAAAVTTTPTT--ASLSLTIHMLFTAVNPNKVGIKYGESRFTVM 158

Query: 142 YRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDRVELRILGD 201
           YRGIPLG+A+VPGF QE HS R V+ T+AVDR NL+QADAADLIRDASLNDRVELR+LGD
Sbjct: 159 YRGIPLGKAAVPGFFQEAHSTRNVEATIAVDRANLMQADAADLIRDASLNDRVELRVLGD 218

Query: 202 VAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 233
           V AKIR+L F+SPGVQVS+DCAIVISPRKQSLTYKQCGFDGLSV
Sbjct: 219 VGAKIRVLDFDSPGVQVSIDCAIVISPRKQSLTYKQCGFDGLSV 258

[Close]
BLAST of Cp4.1LG04g00100 vs. NCBI nr
Match: gi|658008149|ref|XP_008339262.1| (PREDICTED: uncharacterized protein LOC103402303 [Malus domestica])

HSP 1 Score: 328.6 bits (841), Expect = 9.1e-87
Identity = 182/237 (76.79%), Postives = 202/237 (85.23%), Query Frame = 1 

Query: 3   SSSSTSRPLPNATLSTSTHRHHPPYSPRSSSFSSASFKGCCCCLFLLLSFLALLVLAVVL 62
           S SS+S P      ++S HRH+ P +  SSS SSASFKGCCCCLFLL SFLALLVLAVVL
Sbjct: 37  SPSSSSHPH-----NSSNHRHYYPTTSSSSS-SSASFKGCCCCLFLLFSFLALLVLAVVL 96

Query: 63  VVVLALKPKKPQFDLQQVGVQYMGITTPN-TPTTP------MASLSLNIRMVFTAVNPNK 122
           V+VLALKPKKPQFDLQQVGVQYMGI +PN TPT         ASLSLNIRM+F+A NPNK
Sbjct: 97  VIVLALKPKKPQFDLQQVGVQYMGINSPNPTPTADPNQNPTSASLSLNIRMLFSAANPNK 156

Query: 123 VGIKYSESRFTVMYRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDA 182
           VGIKY ESRFTVMYRGIPLG+AS+PGF Q+ H+ RQV  T+AVDRVNLLQADA DL+RDA
Sbjct: 157 VGIKYGESRFTVMYRGIPLGKASIPGFYQDAHTVRQVVATIAVDRVNLLQADAXDLVRDA 216

Query: 183 SLNDRVELRILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 233
           SLNDRVELR+LGDV AKIR+L+F+SPGVQVSVDCAIVISPRKQSL+YKQCGFDGLSV
Sbjct: 217 SLNDRVELRVLGDVGAKIRVLNFDSPGVQVSVDCAIVISPRKQSLSYKQCGFDGLSV 267

[Close]
BLAST of Cp4.1LG04g00100 vs. NCBI nr
Match: gi|225447781|ref|XP_002265790.1| (PREDICTED: uncharacterized protein LOC100267543 [Vitis vinifera])

HSP 1 Score: 326.2 bits (835), Expect = 4.5e-86
Identity = 182/239 (76.15%), Postives = 194/239 (81.17%), Query Frame = 1 

Query: 9   RPLPNATLSTSTHRHHPP------YSPRSSSFSSASFKGCCCCLFLLLSFLALLVLAVVL 68
           RP PN       H HHP       Y   S S SSASFKGCCCCLFLL SFLALLVLAVVL
Sbjct: 14  RPPPN-------HHHHPHSQHHSHYQSPSYSPSSASFKGCCCCLFLLFSFLALLVLAVVL 73

Query: 69  VVVLALKPKKPQFDLQQVGVQYMGIT---------TPNTPTTPMASLSLNIRMVFTAVNP 128
           ++VLA+KPKKPQFDLQQVGVQYMGIT         +P TPT+  ASLSLNI+M+FTAVNP
Sbjct: 74  IIVLAVKPKKPQFDLQQVGVQYMGITANPSSTVAGSPPTPTS--ASLSLNIKMLFTAVNP 133

Query: 129 NKVGIKYSESRFTVMYRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIR 188
           NKVGIKY ESRFTVMYRGIPLG+  VPGF Q  HS RQV+TTVAVDR NLLQADAADLI+
Sbjct: 134 NKVGIKYGESRFTVMYRGIPLGKGVVPGFYQPAHSVRQVETTVAVDRANLLQADAADLIK 193

Query: 189 DASLNDRVELRILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 233
           DASLNDRVELRILG+V AKIR+L F SPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV
Sbjct: 194 DASLNDRVELRILGEVGAKIRVLDFTSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 243

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g00100 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG04g00100 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5H7_CUCSA9.7e-9685.96Uncharacterized protein OS=Cucumis sativus GN=Csa_7G223380 PE=4 SV=1[more]
A0A061DZ99_THECC9.7e-8879.91Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 1 OS... [more]
F6H1R4_VITVI3.1e-8676.15Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g00370 PE=4 SV=... [more]
M5Y567_PRUPE5.3e-8675.42Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010161mg PE=4 SV=1[more]
K7M9P0_SOYBN4.5e-8578.24Uncharacterized protein OS=Glycine max GN=GLYMA_15G048800 PE=4 SV=1[more]
BLAST of Cp4.1LG04g00100 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G01080.16.7e-8071.70 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT3G54200.11.7e-0622.22 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
BLAST of Cp4.1LG04g00100 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659092735|ref|XP_008447191.1|5.7e-9786.15PREDICTED: uncharacterized protein LOC103489700 isoform X2 [Cucumis melo][more]
gi|449444084|ref|XP_004139805.1|1.4e-9585.96PREDICTED: uncharacterized protein LOC101207234 [Cucumis sativus][more]
gi|590683364|ref|XP_007041580.1|1.4e-8779.91Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 1 [T... [more]
gi|658008149|ref|XP_008339262.1|9.1e-8776.79PREDICTED: uncharacterized protein LOC103402303 [Malus domestica][more]
gi|225447781|ref|XP_002265790.1|4.5e-8676.15PREDICTED: uncharacterized protein LOC100267543 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g00100.1Cp4.1LG04g00100.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA-14PFAMPF03168LEA_2coord: 110..209
score: 1.2
NoneNo IPR availablePANTHERPTHR31234FAMILY NOT NAMEDcoord: 4..230
score: 1.2E
NoneNo IPR availablePANTHERPTHR31234:SF8EXPRESSED PROTEINcoord: 4..230
score: 1.2E
NoneNo IPR availableunknownSSF117070LEA14-likecoord: 54..189
score: 4.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g00100CmaCh11G011810Cucurbita maxima (Rimu)cmacpeB147
Cp4.1LG04g00100CmoCh11G012590Cucurbita moschata (Rifu)cmocpeB130
Cp4.1LG04g00100Carg17005Silver-seed gourdcarcpeB0657
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g00100Cucumber (Gy14) v2cgybcpeB120
Cp4.1LG04g00100Cucumber (Gy14) v2cgybcpeB134
Cp4.1LG04g00100Melon (DHL92) v3.6.1cpemedB730
Cp4.1LG04g00100Cucumber (Chinese Long) v3cpecucB0807
Cp4.1LG04g00100Cucumber (Chinese Long) v3cpecucB0821
Cp4.1LG04g00100Wax gourdcpewgoB0905
Cp4.1LG04g00100Cucumber (Gy14) v1cgycpeB0052
Cp4.1LG04g00100Cucurbita maxima (Rimu)cmacpeB097
Cp4.1LG04g00100Cucurbita moschata (Rifu)cmocpeB073
Cp4.1LG04g00100Cucurbita moschata (Rifu)cmocpeB126
Cp4.1LG04g00100Cucurbita moschata (Rifu)cmocpeB127
Cp4.1LG04g00100Wild cucumber (PI 183967)cpecpiB654
Cp4.1LG04g00100Wild cucumber (PI 183967)cpecpiB664
Cp4.1LG04g00100Cucumber (Chinese Long) v2cpecuB651
Cp4.1LG04g00100Cucumber (Chinese Long) v2cpecuB661
Cp4.1LG04g00100Bottle gourd (USVL1VR-Ls)cpelsiB560
Cp4.1LG04g00100Watermelon (Charleston Gray)cpewcgB604
Cp4.1LG04g00100Watermelon (97103) v1cpewmB648
Cp4.1LG04g00100Melon (DHL92) v3.5.1cpemeB618