Carg17005 (gene) Silver-seed gourd

Overview
NameCarg17005
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionLate embryogenesis abundant protein
LocationCucurbita_argyrosperma_scaffold_061 : 1072719 .. 1074918 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGACTAAGGTTTGAAAACCGAACCGAAATGTCATCGTCCTCTTCAACTTCTAGGCCCCTCCCGAACGGCACTCTCTCAACCTCCACCCACCGCCACCACCCGCCTTACAGCCCCCGATCCTCCTCCTTCTCCTCCGCCTCCTTCAAGGGCTGCTGCTGCTGCCTCTTCCTCCTCCTCTCCTTCCTCGCCCTCCTCGTCCTCGCCGTCGTCCTCGTCGTCGTCCTCGCCCTCAAGCCCAAGAAGCCGCAGTTTGATCTCCAGCAGGTTGGCGTCCAGTACATGGGCATTACCACTCCCAACACTCCCACTACTCCTATGGCTTCCCTTTCCCTCAACATTCGAATGGTTTTCACTGCCGTTAACCCTAACAAGGTCGGGATCAAGTATAGCGAGTCCCGTTTCACTGTTATGTACCGAGGAATCCCGCTCGGTCGAGCCTCTGTTCCTGGATTTGTTCAAGAACCACATAGCCAGCGCCAGGTCGATACCACCGTCGCCGTCGATCGCGTCAATCTCCTCCAAGCCGACGCTGCTGATTTGATCCGTGACGCCTCCTTGAACGACCGTGTTGAGCTCAGAATACTCGGCGATGTCGCCGCTAAGATCCGCCTCTTATCCTTCAATTCCCCCGGCGTTCAGGTACTATACTATACCATACTATACTTACCTTTTTCTTTCTAGGAGATTCAGATTTAGGGACATGGATGTAATTACCTGATTTCTGGTATACCCTTCTGGTCTTCCGCATTTTAATGCTCTGCCATCCCCTGCCATCTGCCCCCTCTGTTCCTCTTGAATTTATTTCTCTTGTGTTATAAATTGGGTGAGTTTGAACCAGAAATGCTGTCAATGTTTTTCGGACTTTTTAATGTTTCTTTTCCTTAATTCTGAAGAACACATTGTGCATAAGTAGAAAAAGCTTTGAGTTCTTAATAACTTTGATACACATGAACACAGAAAAGGGTAGAAAACTGGTCTGCTTTGTTTTTGGAAATCAAACAATAAGATTAGTAGAAGAAGAGATTGAAGAACAAAGAATTTGGCAAGAACTCTTTTATGTTCTTGACTGGATTAGGAAGGATCTGAACTAAACCCCCCATTTTTTAGCATTTGTTTTCGTTAATTGTTTGTTCATAATTGTTTTCATGTAATATTTTAGTCAAGAAATTGAGCTGTGGACTCTAAAAGGAGAGATGGAAAGCGACAAGAGAAAGTAGCATCGTTTTCCTTCATATTTGCTTTACTTTCACGCCCATTTTGTAATCTTCCCAATAGCTTTCGCCATAGCTTTTGCTGCAACTCCTTAACGTTATTAGATCAGCAAATCATAGCTTTATCCAATGATAGAACCAATTAGATACTCCAATGCATTCGTCAATCCAAACATAGCTATGTATCGATTAGATCTCGAATGAATTCGAGAGGACCTTCGGTGGTAGCGGTGTTTTTAAGTGAAACGGAGGTTCAAACCATACCTTTGAAGTTATACCCACGAGTGCTATTTCGAGTCAGGGTTTGCCTTCGTTATGTTGTTGCTAGCAAATACCACTATGTTTTGTTTCGATATTCTCCGACCCTTTCTTTTCTGATCCTTCGATAAAAAGATTCATACTCGGGTGGACAATTGGATCTCGTCTCTCTAGACGAGAAGTAATGGTGACAGCTAATATTAATATCAAAAAGTTGCATTATTTAGGAGATGAAAGGAACTTTTGGATCATTCCTTGCCCCATGTGACTTTTGGATGCATCTCTTCCCATTTTCTATTCTTTTGTTTATAATATTATTCTTTCACTTTCAATTATTTTTACAATGCTTTCCTTTTCTTCTCCTTCTGGGATTGTTCAGGTTTCAGTGGATTGTGCAATTGTGATCAGTCCAAGGAAGCAGTCTCTTACGTACAAGCAATGTGGTTTTGATGGCTTAAGTGTCTGACTCGGGTCGGTTCGTGTTTCAATTATTTCATTTTGGTCCCTATACGATTTACCAATTCAGTTCTCATCCACAACCACGAGTCAAGATAGAAAAGGTTGTGGAATTAGGGATTGAATTGAAATGATGAAGATTTTTTGGAAGGACATAATTAACGAGAGGATAGCTACTCGGGAAACGATTTGTAGAGAGAGCGATTACTCCCGAGAGAGAGACTTAGACAAAAAAAATGTAATATTATGAACATTTTTTTACGAGAATATTACGA

mRNA sequence

AGACTAAGGTTTGAAAACCGAACCGAAATGTCATCGTCCTCTTCAACTTCTAGGCCCCTCCCGAACGGCACTCTCTCAACCTCCACCCACCGCCACCACCCGCCTTACAGCCCCCGATCCTCCTCCTTCTCCTCCGCCTCCTTCAAGGGCTGCTGCTGCTGCCTCTTCCTCCTCCTCTCCTTCCTCGCCCTCCTCGTCCTCGCCGTCGTCCTCGTCGTCGTCCTCGCCCTCAAGCCCAAGAAGCCGCAGTTTGATCTCCAGCAGGTTGGCGTCCAGTACATGGGCATTACCACTCCCAACACTCCCACTACTCCTATGGCTTCCCTTTCCCTCAACATTCGAATGGTTTTCACTGCCGTTAACCCTAACAAGGTCGGGATCAAGTATAGCGAGTCCCGTTTCACTGTTATGTACCGAGGAATCCCGCTCGGTCGAGCCTCTGTTCCTGGATTTGTTCAAGAACCACATAGCCAGCGCCAGGTCGATACCACCGTCGCCGTCGATCGCGTCAATCTCCTCCAAGCCGACGCTGCTGATTTGATCCGTGACGCCTCCTTGAACGACCGTGTTGAGCTCAGAATACTCGGCGATGTCGCCGCTAAGATCCGCCTCTTATCCTTCAATTCCCCCGGCGTTCAGGTTTCAGTGGATTGTGCAATTGTGATCAGTCCAAGGAAGCAGTCTCTTACGTACAAGCAATGTGGTTTTGATGGCTTAAGTGTCTGACTCGGGTCGGTTCGTGTTTCAATTATTTCATTTTGGTCCCTATACGATTTACCAATTCAGTTCTCATCCACAACCACGAGTCAAGATAGAAAAGGTTGTGGAATTAGGGATTGAATTGAAATGATGAAGATTTTTTGGAAGGACATAATTAACGAGAGGATAGCTACTCGGGAAACGATTTGTAGAGAGAGCGATTACTCCCGAGAGAGAGACTTAGACAAAAAAAATGTAATATTATGAACATTTTTTTACGAGAATATTACGA

Coding sequence (CDS)

AGACTAAGGTTTGAAAACCGAACCGAAATGTCATCGTCCTCTTCAACTTCTAGGCCCCTCCCGAACGGCACTCTCTCAACCTCCACCCACCGCCACCACCCGCCTTACAGCCCCCGATCCTCCTCCTTCTCCTCCGCCTCCTTCAAGGGCTGCTGCTGCTGCCTCTTCCTCCTCCTCTCCTTCCTCGCCCTCCTCGTCCTCGCCGTCGTCCTCGTCGTCGTCCTCGCCCTCAAGCCCAAGAAGCCGCAGTTTGATCTCCAGCAGGTTGGCGTCCAGTACATGGGCATTACCACTCCCAACACTCCCACTACTCCTATGGCTTCCCTTTCCCTCAACATTCGAATGGTTTTCACTGCCGTTAACCCTAACAAGGTCGGGATCAAGTATAGCGAGTCCCGTTTCACTGTTATGTACCGAGGAATCCCGCTCGGTCGAGCCTCTGTTCCTGGATTTGTTCAAGAACCACATAGCCAGCGCCAGGTCGATACCACCGTCGCCGTCGATCGCGTCAATCTCCTCCAAGCCGACGCTGCTGATTTGATCCGTGACGCCTCCTTGAACGACCGTGTTGAGCTCAGAATACTCGGCGATGTCGCCGCTAAGATCCGCCTCTTATCCTTCAATTCCCCCGGCGTTCAGGTTTCAGTGGATTGTGCAATTGTGATCAGTCCAAGGAAGCAGTCTCTTACGTACAAGCAATGTGGTTTTGATGGCTTAAGTGTCTGA

Protein sequence

RLRFENRTEMSSSSSTSRPLPNGTLSTSTHRHHPPYSPRSSSFSSASFKGCCCCLFLLLSFLALLVLAVVLVVVLALKPKKPQFDLQQVGVQYMGITTPNTPTTPMASLSLNIRMVFTAVNPNKVGIKYSESRFTVMYRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV
Homology
[Close]
BLAST of Carg17005 vs. NCBI nr
Match: XP_022931679.1 (uncharacterized protein LOC111437836 [Cucurbita moschata])

HSP 1 Score: 337.8 bits (865), Expect = 3.0e-89
Identity = 230/232 (99.14%), Postives = 230/232 (99.14%), Query Frame = 0 

Query: 10  MSSSSSTSRPLPNGTLSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 69
           MSSSSSTSRPLPNGTLSTS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MSSSSSTSRPLPNGTLSTSTHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 70  XXXXXXXXKPKKPQFDLQQVGVQYMGITTPNTPTTPMASLSLNIRMVFTAVNPNKVGIKY 129
           XXXXXXXXKPKKPQFDLQQVGVQYMGITTPNTPTTPMASLSLNIRMVFTAVNPNKVGIKY
Sbjct: 61  XXXXXXXXKPKKPQFDLQQVGVQYMGITTPNTPTTPMASLSLNIRMVFTAVNPNKVGIKY 120

Query: 130 SESRFTVMYRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDR 189
           SESRFTVMYRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDR
Sbjct: 121 SESRFTVMYRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDR 180

Query: 190 VELRILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 242
           VELRILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV
Sbjct: 181 VELRILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 232

[Close]
BLAST of Carg17005 vs. NCBI nr
Match: XP_023529478.1 (uncharacterized protein LOC111792323 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 333.2 bits (853), Expect = 7.4e-88
Identity = 230/232 (99.14%), Postives = 230/232 (99.14%), Query Frame = 0 

Query: 10  MSSSSSTSRPLPNGTLSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 69
           MSSSSSTSRPLPN TLSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MSSSSSTSRPLPNATLSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 70  XXXXXXXXKPKKPQFDLQQVGVQYMGITTPNTPTTPMASLSLNIRMVFTAVNPNKVGIKY 129
           XXXXXXXX PKKPQFDLQQVGVQYMGITTPNTPTTPMASLSLNIRMVFTAVNPNKVGIKY
Sbjct: 61  XXXXXXXXXPKKPQFDLQQVGVQYMGITTPNTPTTPMASLSLNIRMVFTAVNPNKVGIKY 120

Query: 130 SESRFTVMYRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDR 189
           SESRFTVMYRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDR
Sbjct: 121 SESRFTVMYRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDR 180

Query: 190 VELRILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 242
           VELRILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV
Sbjct: 181 VELRILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 232

[Close]
BLAST of Carg17005 vs. NCBI nr
Match: XP_022969932.1 (uncharacterized protein LOC111468981 [Cucurbita maxima])

HSP 1 Score: 330.1 bits (845), Expect = 6.3e-87
Identity = 228/232 (98.28%), Postives = 229/232 (98.71%), Query Frame = 0 

Query: 10  MSSSSSTSRPLPNGTLSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 69
           MSSSSSTSRPLPNGTL   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MSSSSSTSRPLPNGTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 70  XXXXXXXXKPKKPQFDLQQVGVQYMGITTPNTPTTPMASLSLNIRMVFTAVNPNKVGIKY 129
           XXXXXXXXKPKKPQFDLQQVGVQYMGITTPNTPT+PMASLSLNIRMVFTAVNPNKVGIKY
Sbjct: 61  XXXXXXXXKPKKPQFDLQQVGVQYMGITTPNTPTSPMASLSLNIRMVFTAVNPNKVGIKY 120

Query: 130 SESRFTVMYRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDR 189
           SESRFTVMYRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDR
Sbjct: 121 SESRFTVMYRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDR 180

Query: 190 VELRILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 242
           VELRILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV
Sbjct: 181 VELRILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 232

[Close]
BLAST of Carg17005 vs. NCBI nr
Match: XP_023554780.1 (NDR1/HIN1-like protein 10 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290.8 bits (743), Expect = 4.2e-75
Identity = 148/164 (90.24%), Postives = 156/164 (95.12%), Query Frame = 0 

Query: 78  KPKKPQFDLQQVGVQYMGITTPNTPTTPMASLSLNIRMVFTAVNPNKVGIKYSESRFTVM 137
           KPKKPQFDLQQVG+QYM ITTPN PT   ASLSLNIRM+FTAVNPNKVGIKY ESRFTVM
Sbjct: 55  KPKKPQFDLQQVGIQYMNITTPN-PTA--ASLSLNIRMIFTAVNPNKVGIKYGESRFTVM 114

Query: 138 YRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDRVELRILGD 197
           YRGIPLGRAS+PGF Q+PHSQRQVD T+AVDRV+LLQADAADLIRDASLNDRVELRILGD
Sbjct: 115 YRGIPLGRASIPGFFQDPHSQRQVDATIAVDRVSLLQADAADLIRDASLNDRVELRILGD 174

Query: 198 VAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 242
           VAAKIRLLSF+SPGVQVSVDCAIVISPRKQSLTYKQCGFDGL+V
Sbjct: 175 VAAKIRLLSFDSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 215

[Close]
BLAST of Carg17005 vs. NCBI nr
Match: XP_008447191.1 (PREDICTED: uncharacterized protein LOC103489700 [Cucumis melo])

HSP 1 Score: 289.3 bits (739), Expect = 1.2e-74
Identity = 149/160 (93.12%), Postives = 153/160 (95.62%), Query Frame = 0 

Query: 82  PQFDLQQVGVQYMGITTPNTPTTPMASLSLNIRMVFTAVNPNKVGIKYSESRFTVMYRGI 141
           PQFDLQQVGVQYMGIT PN PTT  ASLSLNIRM+FTAVNPNKVGIKY ESRFTVMYRGI
Sbjct: 114 PQFDLQQVGVQYMGITNPN-PTT--ASLSLNIRMIFTAVNPNKVGIKYEESRFTVMYRGI 173

Query: 142 PLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAK 201
           PLGRASVPGF Q+PHSQRQVD T+AVDRVNLLQADAADLIRDASLNDRVELRILGDVAAK
Sbjct: 174 PLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAK 233

Query: 202 IRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 242
           IRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGL+V
Sbjct: 234 IRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 270

[Close]
BLAST of Carg17005 vs. TAIR10
Match: AT2G01080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 236.5 bits (602), Expect = 1.7e-62
Identity = 117/162 (72.22%), Postives = 138/162 (85.19%), Query Frame = 0 

Query: 81  KPQFDLQQVGVQYMGITTPNTPTTP-MASLSLNIRMVFTAVNPNKVGIKYSESRFTVMYR 140
           KPQFDLQQV V YMGI+ P+    P  ASLSL IRM+FTAVNPNKVGI+Y ES FTVMY+
Sbjct: 70  KPQFDLQQVAVVYMGISNPSAVLDPTTASLSLTIRMLFTAVNPNKVGIRYGESSFTVMYK 129

Query: 141 GIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDRVELRILGDVA 200
           G+PLGRA+VPGF Q+ HS + V+ T++VDRVNL+QA AADL+RDASLNDRVEL + GDV 
Sbjct: 130 GMPLGRATVPGFYQDAHSTKNVEATISVDRVNLMQAHAADLVRDASLNDRVELTVRGDVG 189

Query: 201 AKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 242
           AKIR+++F+SPGVQVSV+C I ISPRKQ+L YKQCGFDGLSV
Sbjct: 190 AKIRVMNFDSPGVQVSVNCGIGISPRKQALIYKQCGFDGLSV 231

[Close]
BLAST of Carg17005 vs. TAIR10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 46.6 bits (109), Expect = 2.5e-05
Identity = 38/161 (23.60%), Postives = 65/161 (40.37%), Query Frame = 0 

Query: 78  KPKKPQFDLQQVGVQYMGITTPNTPTTPMASLSLNIRMVFTAVNPNKVGIKYSESRFTVM 137
           KPK+P   +  V V  +  +    P      L+L + +  +  NPN++G  Y  S   + 
Sbjct: 78  KPKRPTTTIDSVTVDRLQASV--NPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALLN 137

Query: 138 YRGIPLGRASVPG--FVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDRVELRIL 197
           YRG  +G A +P             +  T+  DR+         L+ D  +   + L   
Sbjct: 138 YRGQVIGEAPLPANRIAARKTVPLNITLTLMADRL----LSETQLLSDV-MAGVIPLNTF 197

Query: 198 GDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGF 237
             V  K+ +L      VQ S  C + IS   +++T + C +
Sbjct: 198 VKVTGKVTVLKIFKIKVQSSSSCDLSISVSDRNVTSQHCKY 231

[Close]
BLAST of Carg17005 vs. TAIR10
Match: AT3G44380.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 43.1 bits (100), Expect = 2.8e-04
Identity = 35/147 (23.81%), Postives = 60/147 (40.82%), Query Frame = 0 

Query: 78  KPKKPQFDLQQVGVQYMGITTPNTPTTPMASLSLNIRMVFTAVNPNKVGIKYSESRFTVM 137
           KPK P F L  + +  + +  P         L   + +     NPN   I YS ++ T++
Sbjct: 32  KPKDPTFHLISIDLTSLKLNLP--------VLDAELMLTVHVTNPNIAAIHYSSTKMTIL 91

Query: 138 YRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDRVELRILGD 197
           Y G  LG A V    Q   S + +     +D + L Q         A+   ++E ++  +
Sbjct: 92  YDGTVLGSAEVKAGSQPARSCQLLRLPARLDGMELAQHARQFFSDVANREMKLEAKLTIE 151

Query: 198 VAAKIRLLSFNSPGVQVSVDCAIVISP 225
            AAK+     +    +V VD  + + P
Sbjct: 152 GAAKVLWWDHS---FRVHVDSFVTVDP 167

[Close]
BLAST of Carg17005 vs. TrEMBL
Match: tr|A0A1S3BGU8|A0A1S3BGU8_CUCME (uncharacterized protein LOC103489700 OS=Cucumis melo OX=3656 GN=LOC103489700 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 8.1e-75
Identity = 149/160 (93.12%), Postives = 153/160 (95.62%), Query Frame = 0 

Query: 82  PQFDLQQVGVQYMGITTPNTPTTPMASLSLNIRMVFTAVNPNKVGIKYSESRFTVMYRGI 141
           PQFDLQQVGVQYMGIT PN PTT  ASLSLNIRM+FTAVNPNKVGIKY ESRFTVMYRGI
Sbjct: 114 PQFDLQQVGVQYMGITNPN-PTT--ASLSLNIRMIFTAVNPNKVGIKYEESRFTVMYRGI 173

Query: 142 PLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAK 201
           PLGRASVPGF Q+PHSQRQVD T+AVDRVNLLQADAADLIRDASLNDRVELRILGDVAAK
Sbjct: 174 PLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAK 233

Query: 202 IRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 242
           IRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGL+V
Sbjct: 234 IRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 270

[Close]
BLAST of Carg17005 vs. TrEMBL
Match: tr|A0A2I4H4E7|A0A2I4H4E7_9ROSI (uncharacterized protein LOC109013411 isoform X1 OS=Juglans regia OX=51240 GN=LOC109013411 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 3.5e-70
Identity = 139/171 (81.29%), Postives = 151/171 (88.30%), Query Frame = 0 

Query: 78  KPKKPQFDLQQVGVQYMGITTPNTPTT-------PMASLSLNIRMVFTAVNPNKVGIKYS 137
           KPKKP FDLQQVGVQYMGITTPN   T         ASLSL+IRM+FTAVNPN+VGIKY 
Sbjct: 69  KPKKPSFDLQQVGVQYMGITTPNPSETNPAANPATSASLSLSIRMLFTAVNPNRVGIKYG 128

Query: 138 ESRFTVMYRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDRV 197
           ESRFTVMYRG+PLG+ASVPGF QE HS RQV+ T+AVDRVNLLQADAA L+RDASLNDRV
Sbjct: 129 ESRFTVMYRGMPLGKASVPGFFQEAHSVRQVEATIAVDRVNLLQADAASLVRDASLNDRV 188

Query: 198 ELRILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 242
           ELR+LGDV AKIR+L+F+SPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV
Sbjct: 189 ELRVLGDVGAKIRILNFDSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 239

[Close]
BLAST of Carg17005 vs. TrEMBL
Match: tr|A0A061DZ99|A0A061DZ99_THECC (Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_006430 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.1e-68
Identity = 139/177 (78.53%), Postives = 150/177 (84.75%), Query Frame = 0 

Query: 78  KPKKPQFDLQQVGVQYMGITTPN-------------TPTTPMASLSLNIRMVFTAVNPNK 137
           KPKKPQFDLQQVGVQYMGI+T N             TPTT  ASLSL I M+FTAVNPNK
Sbjct: 84  KPKKPQFDLQQVGVQYMGISTSNPSAFDGAAAAVTTTPTT--ASLSLTIHMLFTAVNPNK 143

Query: 138 VGIKYSESRFTVMYRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDA 197
           VGIKY ESRFTVMYRGIPLG+A+VPGF QE HS R V+ T+AVDR NL+QADAADLIRDA
Sbjct: 144 VGIKYGESRFTVMYRGIPLGKAAVPGFFQEAHSTRNVEATIAVDRANLMQADAADLIRDA 203

Query: 198 SLNDRVELRILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 242
           SLNDRVELR+LGDV AKIR+L F+SPGVQVS+DCAIVISPRKQSLTYKQCGFDGLSV
Sbjct: 204 SLNDRVELRVLGDVGAKIRVLDFDSPGVQVSIDCAIVISPRKQSLTYKQCGFDGLSV 258

[Close]
BLAST of Carg17005 vs. TrEMBL
Match: tr|F6H1R4|F6H1R4_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0055g00370 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 3.3e-68
Identity = 140/172 (81.40%), Postives = 149/172 (86.63%), Query Frame = 0 

Query: 79  PKKPQFDLQQVGVQYMGIT---------TPNTPTTPMASLSLNIRMVFTAVNPNKVGIKY 138
           PKKPQFDLQQVGVQYMGIT         +P TPT+  ASLSLNI+M+FTAVNPNKVGIKY
Sbjct: 74  PKKPQFDLQQVGVQYMGITANPSSTVAGSPPTPTS--ASLSLNIKMLFTAVNPNKVGIKY 133

Query: 139 SESRFTVMYRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDR 198
            ESRFTVMYRGIPLG+  VPGF Q  HS RQV+TTVAVDR NLLQADAADLI+DASLNDR
Sbjct: 134 GESRFTVMYRGIPLGKGVVPGFYQPAHSVRQVETTVAVDRANLLQADAADLIKDASLNDR 193

Query: 199 VELRILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 242
           VELRILG+V AKIR+L F SPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV
Sbjct: 194 VELRILGEVGAKIRVLDFTSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 243

[Close]
BLAST of Carg17005 vs. TrEMBL
Match: tr|A0A0R0ISF6|A0A0R0ISF6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100789962 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 7.4e-68
Identity = 133/164 (81.10%), Postives = 151/164 (92.07%), Query Frame = 0 

Query: 78  KPKKPQFDLQQVGVQYMGITTPNTPTTPMASLSLNIRMVFTAVNPNKVGIKYSESRFTVM 137
           KPKKPQFDL+QVGVQYMGI TPN+P+T  ASLSL IR++F A NPNKVGI+Y +S FTVM
Sbjct: 93  KPKKPQFDLEQVGVQYMGI-TPNSPST--ASLSLTIRLLFAATNPNKVGIRYGQSSFTVM 152

Query: 138 YRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDRVELRILGD 197
           YRGIPLG+A+VPGF Q+PHS RQV  T+AVDRVNLLQADAADLIRDASLNDRV+LR+LGD
Sbjct: 153 YRGIPLGKATVPGFFQQPHSTRQVIATIAVDRVNLLQADAADLIRDASLNDRVDLRVLGD 212

Query: 198 VAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 242
           VAAKIR+++F+SP VQVSVDCAIVISPRKQSLTYKQCGFDGL+V
Sbjct: 213 VAAKIRVINFDSPAVQVSVDCAIVISPRKQSLTYKQCGFDGLTV 253

The following BLAST results are available for this feature:
BLAST of Carg17005 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022931679.13.0e-8999.14uncharacterized protein LOC111437836 [Cucurbita moschata][more]
XP_023529478.17.4e-8899.14uncharacterized protein LOC111792323 [Cucurbita pepo subsp. pepo][more]
XP_022969932.16.3e-8798.28uncharacterized protein LOC111468981 [Cucurbita maxima][more]
XP_023554780.14.2e-7590.24NDR1/HIN1-like protein 10 [Cucurbita pepo subsp. pepo][more]
XP_008447191.11.2e-7493.13PREDICTED: uncharacterized protein LOC103489700 [Cucumis melo][more]
BLAST of Carg17005 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G01080.11.7e-6272.22Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
AT3G54200.12.5e-0523.60Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
AT3G44380.12.8e-0423.81Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
BLAST of Carg17005 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg17005 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BGU8|A0A1S3BGU8_CUCME8.1e-7593.13uncharacterized protein LOC103489700 OS=Cucumis melo OX=3656 GN=LOC103489700 PE=... [more]
tr|A0A2I4H4E7|A0A2I4H4E7_9ROSI3.5e-7081.29uncharacterized protein LOC109013411 isoform X1 OS=Juglans regia OX=51240 GN=LOC... [more]
tr|A0A061DZ99|A0A061DZ99_THECC1.1e-6878.53Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 1 OS... [more]
tr|F6H1R4|F6H1R4_VITVI3.3e-6881.40Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0055g00370 PE=4 SV=... [more]
tr|A0A0R0ISF6|A0A0R0ISF6_SOYBN7.4e-6881.10Uncharacterized protein OS=Glycine max OX=3847 GN=100789962 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17005-RACarg17005-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 118..218
e-value: 1.8E-12
score: 47.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..36
NoneNo IPR availablePANTHERPTHR31234:SF8EXPRESSED PROTEINcoord: 24..241
NoneNo IPR availablePANTHERPTHR31234FAMILY NOT NAMEDcoord: 24..241
NoneNo IPR availableSUPERFAMILYSSF117070LEA14-likecoord: 63..198

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg17005CmaCh11G011810Cucurbita maxima (Rimu)carcmaB0651
Carg17005CmoCh11G012590Cucurbita moschata (Rifu)carcmoB0632
Carg17005Cp4.1LG04g00100Cucurbita pepo (Zucchini)carcpeB0657
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg17005Melon (DHL92) v3.5.1carmeB0473
Carg17005Melon (DHL92) v3.6.1carmedB0477
Carg17005Wild cucumber (PI 183967)carcpiB0504
Carg17005Cucumber (Chinese Long) v3carcucB0501