Cp4.1LG03g18200 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g18200
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG03 : 12105172 .. 12108288 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAGTTGTTGGATTCTGTTCTTCAGTTCTCCGAATTAGCTTTAGCTTTAGCTTTAGCTTTGGCCATTATTTTCAGAATTTCCATTGTTGAGTAGGTAAGCTGCAGGGCTTTGAAGATAGCTGTTATTCAGTGTGGAGGGTTTAACCAATCCACATACATCAATGTCAGGGACTTGCTTCTTCCTTATGATCCCCAACCTCTGCCCGTCCACGCTGCACAGCCACACGGCCCAATTGAGGTAAGGTTACACTGTTGTCTCGTGAGTTTTTATCAGTTTAATAATTGTAAGGTGAGAGATTAAACTATTGGTGTTCTAAGATGATAACAAGTGATTCTCCCAAACCATACTCAAATCGGCTTCATCAGAACATCTTTAAGTTTGTGTCTATGTGGTGAGTTAAATTTCTAAAGTATCCAACTAAACATTGATTAATCGGTTCCTGCAGCGGTGAAGAACGGGAGAAAGCTAGGGCAGAGGCGATCGAATTCCTAAGAACAATGCCTTGGCGACAAGAAATTCTTCACCGGAGAGGAGATCGGCACCCTGGATTTGGAGTTCGGAGGAATTGTGCATGCGATGAATTCCCTGGCTTGTACGTTTGGACCCATAACTTAAAGAAAGCTGCTCTGATCAGAGATAACCTGCCGGACGCCGACAAGTTGGCCGGAATATACAAGCGCCTGTACGAGCAGCGGCAGTGGAGAATTCTAACTTTTGACTACTCATATGTTAATAATGGCTTGAATATTGTATCTAACATATACATGACTATAGGCATAACTTACTAAGAAACCTCTAAAATGCTAAAATTAATATTTAAGACGAGTTAAGGTTCCACACATAACATAGGCCCCGAAAGTTTAATGTATATCTGAATGACAAGTGATATTAACAAAGTATATGACTTGAGAAAAACAAATTCACTCAACTTATTAATTTCAAATCCTAATGCTTGCTAGTAAGAAACATATACATACATTTTCTCAGGAAAAAACCAAAAGTCCACTCCCAATTCTGTGCAGAGGATCAAAAGAAAATGTGATCCTAACCCAACACCAATTCCTTTCCCATACTACCAAAAATTCTGTTAACAGTAAAGCGACAGCCTCTACTAGAAAGAGCAAACAAGCATTTTTCTCACCAGCTGTTAGAGTGGCCCCGTCCCGCTATCCTTGTCGGCATCGGCTATGCTTGAGTACGAGGTGAAATGATTCGACATCTTCCAGCTCCAATCTTCGTTCCTTGACACAAACATTCTTGGCCATCTGTTTATCCTCACATAGTGTTCTCTGATCTCCCCATCGCCGATGAAACTTGTAACCGTGGAAAAGCAGCATTCATGCCCACCCCATACTCTATCATCAGGATCAGCAGTTTGGCTCCCATCAGGATGGAAATATCGGCGCATCAGAGGGTGGCTGCCTTGCCAATACGGATCAAGATTCCGCCAGTACATCGGAGCTTCCTGAAGGGAACAGAAATTAACTCACCAGACATTATGAATCAATTTGCCCCTCATCAGGAAAGTTGCCTTAAAGATTTGGACGTGGATGTTCAGTCAGTTGCACATTATAACTTTAGATACATTTGCATCTAAGCAGAAAATTGGAAGCTTGGACTAAAACCAGCCTGCACTCGAGCATGATAATAAAACCATGCAATTGTACTTCTCAAAAGGTATTCAGGATCAAGCAGTAGACACCTTATGGGATATACCCTCTAAATCACTAGTACGGCCATCAATATTGTGAGTACCAGCATAGACATTTCACGAAGAAACATAGACACGGCCATGACACCACACAAATTTGAAAATAGACGCATTATATACGATTATCATGCTCCATAGACAGTTCCAAATCCAAGTGGGTATGAGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNAGATGTTTTTTTTTAACACAATCACTAGCATGGCTATCTAAGTTGTGAGGATCATCCATGAAATTTGTATTGCTAAAACATCCACCACCAGCCATCTAACCTCTCTCAGTGAGTAGGGCACACTTAAATAAATTATGGATATTTCTGATGGAAACCATATAGTTGGGTGTACAACTAAGATGAGGATAAAATCAGATATAGATACCATGAATCTCCGTAAGATGCCTAAGGAATGGTGTAGAAAAGATGAAAGGTGCTCAAATGTGTAGAAAATATGTAATAACATAGTCGGGTTGAAACAATCATAAAACACAAACGTAAAAGAATTCCATCCAGTTAATTTAGAACTTCAATATCCTCCTCTCCTAACCAGGTTTCATATCATCTAATTCATTACATGATGGTTAGCGTCCAAAAAAAGAATGTTTGATGACTGCATAAAAGACCAGCATACCTTATTGAAGTGGAATTGCCAGGCATGAGCACATAAATCTTCCCTCATAATGCGAGTCTGATACAAAAAGTTAAACCCATGAAAAACGATATCAAAGTAATACATGCTTCTCATTATGCCATGCTTGGGAGTACATGTGTGGAACATATTCTTTTTTCTAAATTATTGATGACGAGATTCAGTATATGCACTTTGTCATCCCAACTGCGTTCACACAACTATACATGGAGTAACACACATATATAAGTATATGGAACGACATACTCCCGAAACTATTTCTTGGGGGTGGAGAGAGAAACTTAACTCGTTTGCCATCCATGATGGATAACGAATAGGCAGCCAGCCTTGAAAAACTTCGGGTTCGTGCCAATCTAGGGATATGTGCTTTCCTGAGCCACAGTTCCATGCACTAAGAGAAAATACAATAAACTTGCTTACCAAATGTTCAATTTTACAGTAAACAGTAAAGAATGTTAGTTTTTTTGCAGCTACACCCTTTAAAATTTGTAGAATTTTAAATCATCTATCCCAGTGTCTAATAACATACACATGACAGGCAGTCATAACTATCCCCTGGCATAACCAGGGATGAGCTATCCAGCAAGAAGGATGTGAATTTCTTGGCTTCAACTTCAATCCTTGTTCATATAACATCTAATATTTTCTAAAAGCCTAAAAGAAGACATGAATTTTAGAAAATAATCTACAATGCATCTTTCAAACACACCTAAACAA

mRNA sequence

ATGGTGAAGTTGTTGGATTCTGTTCTTCAGTTCTCCGAATTAGCTTTAGCTTTAGCTTTAGCTTTGGCCATTATTTTCAGAATTTCCATTGTTGACGGTGAAGAACGGGAGAAAGCTAGGGCAGAGGCGATCGAATTCCTAAGAACAATGCCTTGGCGACAAGAAATTCTTCACCGGAGAGGAGATCGGCACCCTGGATTTGGAGTTCGGAGGAATTGTGCATGCGATGAATTCCCTGGCTTGTACGTTTGGACCCATAACTTAAAGAAAGCTGCTCTGATCAGAGATAACCTGCCGGACGCCGACAAGTTGGCCGGAATATACAAGCGCCTGTACGAGCAGCGGCAGTGGAGAATTCTAACTTTTGACTACTCATATGTTAATAATGGCTTGAATATTGTATCTAACATATACATGACTATAGGCATAACTTACTAAGAAACCTCTAAAATGCTAAAATTAATATTTAAGACGAGTTAAGGTTCCACACATAACATAGGCCCCGAAAGTTTAATGTATATCTGAATGACAAGTGATATTAACAAAGTATATGACTTGAGAAAAACAAATTCACTCAACTTATTAATTTCAAATCCTAATGCTTGCTAGTAAGAAACATATACATACATTTTCTCAGGAAAAAACCAAAAGTCCACTCCCAATTCTGTGCAGAGGATCAAAAGAAAATGTGATCCTAACCCAACACCAATTCCTTTCCCATACTACCAAAAATTCTGTTAACAGTAAAGCGACAGCCTCTACTAGAAAGAGCAAACAAGCATTTTTCTCACCAGCTGTTAGAGTGGCCCCGTCCCGCTATCCTTGTCGGCATCGGCTATGCTTGAGTACGAGGTGAAATGATTCGACATCTTCCAGCTCCAATCTTCGTTCCTTGACACAAACATTCTTGGCCATCTGTTTATCCTCACATAGTGTTCTCTGATCTCCCCATCGCCGATGAAACTTGTAACCGTGGAAAAGCAGCATTCATGCCCACCCCATACTCTATCATCAGGATCAGCAGTTTGGCTCCCATCAGGATGGAAATATCGGCGCATCAGAGGGTGGCTGCCTTGCCAATACGGATCAAGATTCCGCCAGTACATCGGAGCTTCCTGAAGGGAACAGAAATTAACTCACCAGACATTATGAATCAATTTGCCCCTCATCAGGAAAGTTGCCTTAAAGATTTGGACGTGGATGTTCAGTCAGTTGCACATTATAACTTTAGATACATTTGCATCTAAGCAGAAAATTGGAAGCTTGGACTAAAACCAGCCTGCACTCGAGCATGATAATAAAACCATGCAATTGTACTTCTCAAAAGGTATTCAGGATCAAGCAGTAGACACCTTATGGGATATACCCTCTAAATCACTAGTACGGCCATCAATATTGTGAGTACCAGCATAGACATTTCACGAAGAAACATAGACACGGCCATGACACCACACAAATTTGAAAATAGACGCATTATATACGATTATCATGCTCCATAGACAGTTCCAAATCCAAGTGGGTATGAGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNAGATGTTTTTTTTTAACACAATCACTAGCATGGCTATCTAAGTTGTGAGGATCATCCATGAAATTTGTATTGCTAAAACATCCACCACCAGCCATCTAACCTCTCTCAGTGAGTAGGGCACACTTAAATAAATTATGGATATTTCTGATGGAAACCATATAGTTGGGTGTACAACTAAGATGAGGATAAAATCAGATATAGATACCATGAATCTCCGTAAGATGCCTAAGGAATGGTGTAGAAAAGATGAAAGGTGCTCAAATGTGTAGAAAATATGTAATAACATAGTCGGGTTGAAACAATCATAAAACACAAACGTAAAAGAATTCCATCCAGTTAATTTAGAACTTCAATATCCTCCTCTCCTAACCAGGTTTCATATCATCTAATTCATTACATGATGGTTAGCGTCCAAAAAAAGAATGTTTGATGACTGCATAAAAGACCAGCATACCTTATTGAAGTGGAATTGCCAGGCATGAGCACATAAATCTTCCCTCATAATGCGAGTCTGATACAAAAAGTTAAACCCATGAAAAACGATATCAAAGTAATACATGCTTCTCATTATGCCATGCTTGGGAGTACATGTGTGGAACATATTCTTTTTTCTAAATTATTGATGACGAGATTCAGTATATGCACTTTGTCATCCCAACTGCGTTCACACAACTATACATGGAGTAACACACATATATAAGTATATGGAACGACATACTCCCGAAACTATTTCTTGGGGGTGGAGAGAGAAACTTAACTCGTTTGCCATCCATGATGGATAACGAATAGGCAGCCAGCCTTGAAAAACTTCGGGTTCGTGCCAATCTAGGGATATGTGCTTTCCTGAGCCACAGTTCCATGCACTAAGAGAAAATACAATAAACTTGCTTACCAAATGTTCAATTTTACAGTAAACAGTAAAGAATGTTAGTTTTTTTGCAGCTACACCCTTTAAAATTTGTAGAATTTTAAATCATCTATCCCAGTGTCTAATAACATACACATGACAGGCAGTCATAACTATCCCCTGGCATAACCAGGGATGAGCTATCCAGCAAGAAGGATGTGAATTTCTTGGCTTCAACTTCAATCCTTGTTCATATAACATCTAATATTTTCTAAAAGCCTAAAAGAAGACATGAATTTTAGAAAATAATCTACAATGCATCTTTCAAACACACCTAAACAA

Coding sequence (CDS)

ATGGTGAAGTTGTTGGATTCTGTTCTTCAGTTCTCCGAATTAGCTTTAGCTTTAGCTTTAGCTTTGGCCATTATTTTCAGAATTTCCATTGTTGACGGTGAAGAACGGGAGAAAGCTAGGGCAGAGGCGATCGAATTCCTAAGAACAATGCCTTGGCGACAAGAAATTCTTCACCGGAGAGGAGATCGGCACCCTGGATTTGGAGTTCGGAGGAATTGTGCATGCGATGAATTCCCTGGCTTGTACGTTTGGACCCATAACTTAAAGAAAGCTGCTCTGATCAGAGATAACCTGCCGGACGCCGACAAGTTGGCCGGAATATACAAGCGCCTGTACGAGCAGCGGCAGTGGAGAATTCTAACTTTTGACTACTCATATGTTAATAATGGCTTGAATATTGTATCTAACATATACATGACTATAGGCATAACTTACTAA

Protein sequence

MVKLLDSVLQFSELALALALALAIIFRISIVDGEEREKARAEAIEFLRTMPWRQEILHRRGDRHPGFGVRRNCACDEFPGLYVWTHNLKKAALIRDNLPDADKLAGIYKRLYEQRQWRILTFDYSYVNNGLNIVSNIYMTIGITY
Homology
[Close]
BLAST of Cp4.1LG03g18200 vs. TrEMBL
Match: A0A0A0L6W3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G133350 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-07
Identity = 39/99 (39.39%), Postives = 51/99 (51.52%), Query Frame = 1 

Query: 34  EEREKARAEAIEFLRTMPWRQEILHRR--------GDRHPGFGV-------------RRN 93
           EE EKA+AE +EFLRT+   ++ L  +        G     FG               + 
Sbjct: 117 EEEEKAKAEGLEFLRTI--EEQCLGDKKFFAGEEIGALDLAFGGIAHWLPVLEQITGTKL 176

Query: 94  CACDEFPGLYVWTHNLKKAALIRDNLPDADKLAGIYKRL 112
              D+FP LY WT N K++A+IRDNLPDA KLA +Y  L
Sbjct: 177 LNADQFPRLYAWTQNFKESAVIRDNLPDAQKLAALYNAL 213

[Close]
BLAST of Cp4.1LG03g18200 vs. NCBI nr
Match: gi|659075956|ref|XP_008438421.1| (PREDICTED: glutathione transferase GST 23-like [Cucumis melo])

HSP 1 Score: 71.2 bits (173), Expect = 1.6e-09
Identity = 44/103 (42.72%), Postives = 56/103 (54.37%), Query Frame = 1 

Query: 34  EEREKARAEAIEFLRTMPWRQEILHRR--------GDRHPGFGVRRNCA----------- 93
           EE EKA+AEAIEFLRT+   ++ L  +        G     FG   +             
Sbjct: 117 EEEEKAKAEAIEFLRTI--EEQCLGDKKFFAGEEIGALDLAFGGIAHWLPVLEQITGKIL 176

Query: 94  --CDEFPGLYVWTHNLKKAALIRDNLPDADKLAGIYKRLYEQR 116
              DEFP LY WT N K+AA+IRDNLPDA KLAG+Y  L +++
Sbjct: 177 LDADEFPRLYAWTQNFKEAAVIRDNLPDAQKLAGLYNALRDKQ 217

[Close]
BLAST of Cp4.1LG03g18200 vs. NCBI nr
Match: gi|700201651|gb|KGN56784.1| (hypothetical protein Csa_3G133350 [Cucumis sativus])

HSP 1 Score: 63.9 bits (154), Expect = 2.6e-07
Identity = 39/99 (39.39%), Postives = 51/99 (51.52%), Query Frame = 1 

Query: 34  EEREKARAEAIEFLRTMPWRQEILHRR--------GDRHPGFGV-------------RRN 93
           EE EKA+AE +EFLRT+   ++ L  +        G     FG               + 
Sbjct: 117 EEEEKAKAEGLEFLRTI--EEQCLGDKKFFAGEEIGALDLAFGGIAHWLPVLEQITGTKL 176

Query: 94  CACDEFPGLYVWTHNLKKAALIRDNLPDADKLAGIYKRL 112
              D+FP LY WT N K++A+IRDNLPDA KLA +Y  L
Sbjct: 177 LNADQFPRLYAWTQNFKESAVIRDNLPDAQKLAALYNAL 213

[Close]
BLAST of Cp4.1LG03g18200 vs. NCBI nr
Match: gi|778678003|ref|XP_011650901.1| (PREDICTED: glutathione transferase GST 23-like [Cucumis sativus])

HSP 1 Score: 63.9 bits (154), Expect = 2.6e-07
Identity = 39/99 (39.39%), Postives = 51/99 (51.52%), Query Frame = 1 

Query: 34  EEREKARAEAIEFLRTMPWRQEILHRR--------GDRHPGFGV-------------RRN 93
           EE EKA+AE +EFLRT+   ++ L  +        G     FG               + 
Sbjct: 134 EEEEKAKAEGLEFLRTI--EEQCLGDKKFFAGEEIGALDLAFGGIAHWLPVLEQITGTKL 193

Query: 94  CACDEFPGLYVWTHNLKKAALIRDNLPDADKLAGIYKRL 112
              D+FP LY WT N K++A+IRDNLPDA KLA +Y  L
Sbjct: 194 LNADQFPRLYAWTQNFKESAVIRDNLPDAQKLAALYNAL 230

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g18200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG03g18200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6W3_CUCSA1.8e-0739.39Uncharacterized protein OS=Cucumis sativus GN=Csa_3G133350 PE=3 SV=1[more]
BLAST of Cp4.1LG03g18200 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG03g18200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075956|ref|XP_008438421.1|1.6e-0942.72PREDICTED: glutathione transferase GST 23-like [Cucumis melo][more]
gi|700201651|gb|KGN56784.1|2.6e-0739.39hypothetical protein Csa_3G133350 [Cucumis sativus][more]
gi|778678003|ref|XP_011650901.1|2.6e-0739.39PREDICTED: glutathione transferase GST 23-like [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g18200.1Cp4.1LG03g18200.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g18200CmoCh14G019090Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g18200Carg16518Silver-seed gourdcarcpeB0334
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g18200Silver-seed gourdcarcpeB1098
Cp4.1LG03g18200Silver-seed gourdcarcpeB1331
Cp4.1LG03g18200Silver-seed gourdcarcpeB1504
Cp4.1LG03g18200Cucumber (Chinese Long) v3cpecucB0746
Cp4.1LG03g18200Cucumber (Chinese Long) v3cpecucB0755
Cp4.1LG03g18200Cucumber (Chinese Long) v3cpecucB0759
Cp4.1LG03g18200Wax gourdcpewgoB0765
Cp4.1LG03g18200Wax gourdcpewgoB0798
Cp4.1LG03g18200Wax gourdcpewgoB0800
Cp4.1LG03g18200Cucurbita pepo (Zucchini)cpecpeB184
Cp4.1LG03g18200Cucurbita pepo (Zucchini)cpecpeB265
Cp4.1LG03g18200Cucurbita pepo (Zucchini)cpecpeB333
Cp4.1LG03g18200Cucurbita pepo (Zucchini)cpecpeB478
Cp4.1LG03g18200Cucurbita pepo (Zucchini)cpecpeB482
Cp4.1LG03g18200Cucumber (Gy14) v1cgycpeB0380
Cp4.1LG03g18200Cucumber (Gy14) v1cgycpeB0682
Cp4.1LG03g18200Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g18200Cucurbita maxima (Rimu)cmacpeB402
Cp4.1LG03g18200Cucurbita maxima (Rimu)cmacpeB640
Cp4.1LG03g18200Cucurbita maxima (Rimu)cmacpeB837
Cp4.1LG03g18200Cucurbita maxima (Rimu)cmacpeB928
Cp4.1LG03g18200Cucurbita moschata (Rifu)cmocpeB364
Cp4.1LG03g18200Cucurbita moschata (Rifu)cmocpeB590
Cp4.1LG03g18200Cucurbita moschata (Rifu)cmocpeB787
Cp4.1LG03g18200Cucurbita moschata (Rifu)cmocpeB862
Cp4.1LG03g18200Wild cucumber (PI 183967)cpecpiB598
Cp4.1LG03g18200Wild cucumber (PI 183967)cpecpiB610
Cp4.1LG03g18200Wild cucumber (PI 183967)cpecpiB611
Cp4.1LG03g18200Cucumber (Chinese Long) v2cpecuB596
Cp4.1LG03g18200Cucumber (Chinese Long) v2cpecuB608
Cp4.1LG03g18200Cucumber (Chinese Long) v2cpecuB609
Cp4.1LG03g18200Bottle gourd (USVL1VR-Ls)cpelsiB484
Cp4.1LG03g18200Bottle gourd (USVL1VR-Ls)cpelsiB506
Cp4.1LG03g18200Watermelon (Charleston Gray)cpewcgB559
Cp4.1LG03g18200Watermelon (Charleston Gray)cpewcgB561
Cp4.1LG03g18200Watermelon (97103) v1cpewmB613
Cp4.1LG03g18200Watermelon (97103) v1cpewmB622
Cp4.1LG03g18200Silver-seed gourdcarcpeB0327
Cp4.1LG03g18200Melon (DHL92) v3.5.1cpemeB578
Cp4.1LG03g18200Melon (DHL92) v3.5.1cpemeB585
Cp4.1LG03g18200Cucumber (Gy14) v2cgybcpeB231
Cp4.1LG03g18200Cucumber (Gy14) v2cgybcpeB404
Cp4.1LG03g18200Cucumber (Gy14) v2cgybcpeB406
Cp4.1LG03g18200Melon (DHL92) v3.6.1cpemedB685
Cp4.1LG03g18200Melon (DHL92) v3.6.1cpemedB693