Cp4.1LG03g17250 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g17250
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG03 : 12719098 .. 12722544 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGTGCGAAATTGAAGTATTTGATCTTCATCTTATTCATTCAACTATGTCGGTATTATATATTTCTAAAGATAATGAAATTAAATTCAAAAGCAAATCACGTACTGAGTTCGGACGCGTCGATGCTACGCCAACGCGGTTGATACTCTTCGATCGTACAATCAAAAAGGCGGAGAGATTGGCTACAAATTAATCTCTTTATTTGTAGGTTTCTGTTTCTCCTAATCGCCATTTTCACGGAGCACACCAAATTTTCTCTTCTTCGTACGCAATCTCTCTCGCTCTCTCTATTAATTTTCTTCTTGCTCTTTGATTTATTCCGTAGTTTTTTGTGGTTTTGCTTCGATCGAAATCCTGCGTTTTGTCGATTTGTTGCGAGGAGGATTTTTCTGTCTCTGAATCTGCGTTTGATTCCGGAATTTGGTTGTTATCTTCATCACTCATCGTATGTTCAATTTGATGCCTATTCATTTATCTTGATTGTGATCATGTTCTCCTGAATTTCACTCTGATGATTTTCTTCTTCTTTCTGTTCGTTTTTCGCTCTCTCCGGAATTTTTTGGACTGCGTTCGGAAAATCGATTGAATGTGTGGTTAAAGATCATTTCATGTTCGAGTTTGTCGGTGTTCTTCAGGTCCTCTTGCTTTTTATCGCTTATCCTCACGATAGATAACAACATTAGAAAAGAGTTGTTGATCCATTCTGTTGCGAACTTTTAATGAATGAATATGATTTTGCTAGATAACAGGTTGAAGCAACGGGTGGAGTTATCAATTCCTTTGTTTGATTGTTCTTGGTGTAGATATGTAATTTTAGGTTCGAACTAATCTTATTCGATCCAATGTAATTTTAGTCAGTCTTGAATTTTGTTTGGTATCAACAGAATCAAATGGAGTCTTCGCATATCAATTCCTTTGTTTGATTGTTCTTGAATTTTGCTTTAGTTTTTCATTCGTATTCATTCTTTCAGTGATATTTATGGCCTTAAAATTTATGTTTTCCTCAATCGTCTAAAGATTAACAATCTTTTGTTGTTTCCATTGTCGATTCATAGTTTGGTTTCTTACTCTTGGAAACTTGAAGAAAAATGGGAGGCGGGAAGGAAGAGGAAAGTAAAGACAAAGGCCTGTTTTCAAGTATGGCGTCGTTTGCTGCAGGGCAGCACTATTCTCATCCTCATGGATATCCACCACCACCACCGTACGCAGGAGCTGGATATCCCCCTCCGGGAGGGTACCCTCCGGCTGCGTATCCACCTCCTGGCGGATATCCTCCGGCTGCGTATCCACCTCCTGGCGGATATCCTTCGGCTGCGTATCCACCTCCTGGCGGATATCCACCGGCTGGCTATCCTCCTCACGGTGCATACCCTCCCGCTGGCTATCCTGCCCCCCATCATTACCCTGGTATTATCTCATTCTACCGTTTGTGTTGATGACTTTGGTAATTAAAATTCTCTTTTAGTTGATTTAATATGAATTTCAATGCTATATGAGGTGTTTGAACTATAATTCAGGATTAAAAATGTACTTGAATTGAAACTTTATACATTAAAAATTCTCCCTAATTCGGATCCTTTAAATTTTTAGAATTTAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTGCATATGAAGTTAGGGGGTTGTTGGTTATCGTCATGATTTTTCGTTACAGACCACGGAGGCCATGGACTCGGATTCGGATCCTTTAAAGTTTTAGTATTTTAAACTTTTTTTTGCATATGAAGTTAGGGGGTTGTTGGTTATCGTCATGATTTTTCGTTACAGGCCAAGTGGACTCTTGGCCTCGGATTCGGATCCTTCAAAATTTTTAGAATTTAAAACTTTTTTTTTTTGCATACGAGGGTCATGATTTTTCGTTACAGACCATGGACTCGGATTTGGATCCTTTAAATTTTTAGAATTTTAAATTTTTTTTTGCATATGAAGCTAGGGGGTTGTTGGTTATCGTCATGATTTTTCGTTACAGGCCACGGAGGCCATGGACTCGGATTCGGACATGGATCCGGTATGGGGGGGTTGTTGGCTGGTGGTGCAGCTGCTGCAGCCGCCGCGTACGGCGCTCATCATCTTGCTCATGCACGCCCATTTGGGTTTGGTCACGGAAAATTCAAACATGGGAAATTTGGCAAGCGTTGGAAGCATGGAGGAGGCAAGTTCAAGAAATGGAAGTGATGAAATTGCTAGAAGCTTATATGTGAGTTCTTAGTCCAAAACCTTTAAAAAAAATAATAATAAATATTGTATTTTAATGTTTGAGTGTTTATTTCATTACATTGGCTTCTTTTTGTAAAGATTTCAACAATTTTATTATTATATATAATTTTATCTTTATTTCCATGTTGATAGATGTGATAATTTGTGATTGTAAAACATTTAAACTAATTCAAAATTAATTTAATGTTTAATTTTAGATAATATTAAACGCAATTTGAAAATTCAAAATAATAAACTAAAGTAATTCCCAATCTCTATTTTAATTTAAGAGCATATGACGGTTCCATTTGAAGAGACCTTTCCAATTTGATCCCCACTTGAATGATTCGGCGTCTGGATTACAAATAAACAAGCAATCTTCAAGAAATGATGTTCCATGGGCACTGTCAATTCTCCTTCATTGGAATGTCCCAGGAGGGTAAACTTCACCTTCCTCGATTGGTTCACGACAGAAGAACGAGAATTTTGTGCATGTCAATAGCTTACTCGACTGCGTACACAAGCCTCGACCGCTGTAGGATCTGTTTAGAGCAACTCAACTCAGTCTAATTAGTCTTAGATAGATTGCCCGAGGACGTAAACTCGAATTTGCTTCATGGAACAAATTTTGAAAACTTAAAGAATTGTCAATGAAATATAAAACACCATTGATATCACGAGCTAATAGAAACGAACCTGTGGAACGCTTGCAGTGCCACATCTAATAACCCATTGATCCAGAGCTCGACGACGCAACGACGACAATTGATCTACTAATCTCGAGGCAGCATTGGTCATGAATGTTTTCTTTCCCACTTACCTTCGCGTCTGCCACCATCCCTTTCCCTTCGTTCTATAACTTGCCTCGACTTGCTGCCTCTTGATCCATGTCTTTGAGAAGATCCGGGCGGACCCGAATGTCCATCAAATATCGAAACTAATTCTGGATCACCAACACTTCCAGTGTCACCTGAATCCTTGCTTCCATCTATATTTTCATCGTAACTGCTACCACATTCATCTGGACGCTCACGAGATTGTAGGATTGTAGGCAACTGTCCCGAGTATTGTCTCGCCCCCGAAAGTACAATGGTTGGTACTCCGGTCATTGATGAATTGGTGGTAGTAGAAGTTTCAGTCTGTAAGCCACCGGCACTTGTTCTGGCATTCCCTTCATTGCTTGGTCTGCCATTGTCTCTTTCACGATATCTGTCCCGAGG

mRNA sequence

TGGTGCGAAATTGAAGTATTTGATCTTCATCTTATTCATTCAACTATGTCGGTATTATATATTTCTAAAGATAATGAAATTAAATTCAAAAGCAAATCACGTACTGAGTTCGGACGCGTCGATGCTACGCCAACGCGGTTGATACTCTTCGATCGTACAATCAAAAAGGCGGAGAGATTGGCTACAAATTAATCTCTTTATTTGTAGGTTTCTGTTTCTCCTAATCGCCATTTTCACGGAGCACACCAAATTTTCTCTTCTTCGTACGCAATCTCTCTCGCTCTCTCTATTAATTTTCTTCTTGCTCTTTGATTTATTCCGTAGTTTTTTGTGGTTTTGCTTCGATCGAAATCCTGCGTTTTGTCGATTTGTTGCGAGGAGGATTTTTCTGTCTCTGAATCTGCGTTTGATTCCGGAATTTGTTTGGTTTCTTACTCTTGGAAACTTGAAGAAAAATGGGAGGCGGGAAGGAAGAGGAAAGTAAAGACAAAGGCCTGTTTTCAAGTATGGCGTCGTTTGCTGCAGGGCAGCACTATTCTCATCCTCATGGATATCCACCACCACCACCGTACGCAGGAGCTGGATATCCCCCTCCGGGAGGGTACCCTCCGGCTGCGTATCCACCTCCTGGCGGATATCCTCCGGCTGCGTATCCACCTCCTGGCGGATATCCTTCGGCTGCGTATCCACCTCCTGGCGGATATCCACCGGCTGGCTATCCTCCTCACGGTGCATACCCTCCCGCTGGCTATCCTGCCCCCCATCATTACCCTGGCCACGGAGGCCATGGACTCGGATTCGGACATGGATCCGGTATGGGGGGGTTGTTGGCTGGTGGTGCAGCTGCTGCAGCCGCCGCGTACGGCGCTCATCATCTTGCTCATGCACGCCCATTTGGGTTTGGTCACGGAAAATTCAAACATGGGAAATTTGGCAAGCGTTGGAAGCATGGAGGAGGCAAGTTCAAGAAATGGAAGTGATGAAATTGCTAGAAGCTTATATGTGAGTTCTTAGTCCAAAACCTTTAAAAAAAATAATAATAAATATTGTATTTTAATGTTTGAGTGTTTATTTCATTACATTGGCTTCTTTTTGTAAAGATTTCAACAATTTTATTATTATATATAATTTTATCTTTATTTCCATGTTGATAGATGTGATAATTTGTGATTGTAAAACATTTAAACTAATTCAAAATTAATTTAATGTTTAATTTTAGATAATATTAAACGCAATTTGAAAATTCAAAATAATAAACTAAAGTAATTCCCAATCTCTATTTTAATTTAAGAGCATATGACGGTTCCATTTGAAGAGACCTTTCCAATTTGATCCCCACTTGAATGATTCGGCGTCTGGATTACAAATAAACAAGCAATCTTCAAGAAATGATGTTCCATGGGCACTGTCAATTCTCCTTCATTGGAATGTCCCAGGAGGGTAAACTTCACCTTCCTCGATTGGTTCACGACAGAAGAACGAGAATTTTGTGCATGTCAATAGCTTACTCGACTGCGTACACAAGCCTCGACCGCTGTAGGATCTGTTTAGAGCAACTCAACTCAGTCTAATTAGTCTTAGATAGATTGCCCGAGGACGTAAACTCGAATTTGCTTCATGGAACAAATTTTGAAAACTTAAAGAATTGTCAATGAAATATAAAACACCATTGATATCACGAGCTAATAGAAACGAACCTGTGGAACGCTTGCAGTGCCACATCTAATAACCCATTGATCCAGAGCTCGACGACGCAACGACGACAATTGATCTACTAATCTCGAGGCAGCATTGGTCATGAATGTTTTCTTTCCCACTTACCTTCGCGTCTGCCACCATCCCTTTCCCTTCGTTCTATAACTTGCCTCGACTTGCTGCCTCTTGATCCATGTCTTTGAGAAGATCCGGGCGGACCCGAATGTCCATCAAATATCGAAACTAATTCTGGATCACCAACACTTCCAGTGTCACCTGAATCCTTGCTTCCATCTATATTTTCATCGTAACTGCTACCACATTCATCTGGACGCTCACGAGATTGTAGGATTGTAGGCAACTGTCCCGAGTATTGTCTCGCCCCCGAAAGTACAATGGTTGGTACTCCGGTCATTGATGAATTGGTGGTAGTAGAAGTTTCAGTCTGTAAGCCACCGGCACTTGTTCTGGCATTCCCTTCATTGCTTGGTCTGCCATTGTCTCTTTCACGATATCTGTCCCGAGG

Coding sequence (CDS)

ATGGGAGGCGGGAAGGAAGAGGAAAGTAAAGACAAAGGCCTGTTTTCAAGTATGGCGTCGTTTGCTGCAGGGCAGCACTATTCTCATCCTCATGGATATCCACCACCACCACCGTACGCAGGAGCTGGATATCCCCCTCCGGGAGGGTACCCTCCGGCTGCGTATCCACCTCCTGGCGGATATCCTCCGGCTGCGTATCCACCTCCTGGCGGATATCCTTCGGCTGCGTATCCACCTCCTGGCGGATATCCACCGGCTGGCTATCCTCCTCACGGTGCATACCCTCCCGCTGGCTATCCTGCCCCCCATCATTACCCTGGCCACGGAGGCCATGGACTCGGATTCGGACATGGATCCGGTATGGGGGGGTTGTTGGCTGGTGGTGCAGCTGCTGCAGCCGCCGCGTACGGCGCTCATCATCTTGCTCATGCACGCCCATTTGGGTTTGGTCACGGAAAATTCAAACATGGGAAATTTGGCAAGCGTTGGAAGCATGGAGGAGGCAAGTTCAAGAAATGGAAGTGA

Protein sequence

MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGGYPPAAYPPPGGYPSAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGFGHGSGMGGLLAGGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGGGKFKKWK
Homology
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BLAST of Cp4.1LG03g17250 vs. Swiss-Prot
Match: GRP3_DAUCA (Glycine-rich protein A3 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.7e-19
Identity = 80/161 (49.69%), Postives = 91/161 (56.52%), Query Frame = 1 

Query: 1   MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGG 60
           MGGG     +DKGLFS++A   AG  +  P  YPP    A  GYPP G YPPA     GG
Sbjct: 1   MGGGDGHNDQDKGLFSNLAGGLAGGGHYPPGQYPP----AAGGYPPQG-YPPAG----GG 60

Query: 61  YPPAAYPPPGG-YPSAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGFGHGS 120
           YPP  YPP GG YP   YPP GG    GYPP G YPPAG+ +    P H GHG       
Sbjct: 61  YPPQGYPPAGGGYPPQGYPPAGG----GYPPQG-YPPAGHHSGSSAPHHSGHG------- 120

Query: 121 GMGGLLAGGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFG 161
           G+ G++AGG AAAAAAYG HH+        GHG + HG  G
Sbjct: 121 GVAGMVAGGRAAAAAAYGVHHMTQGHGSHGGHGGYAHGAMG 140

[Close]
BLAST of Cp4.1LG03g17250 vs. Swiss-Prot
Match: OPSD_SEPOF (Rhodopsin OS=Sepia officinalis GN=RHO PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.6e-06
Identity = 40/71 (56.34%), Postives = 40/71 (56.34%), Query Frame = 1 

Query: 42  AGYPPPGGYPPAAYPPPGGYPPAAYPPP---GGYPSAAYPPPGGYPPAGYPPHGAYPPAG 101
           A YPP G     AYPP GGYPP  YPPP   GGYP   YPP    PP GYPP   YPP G
Sbjct: 385 AAYPPQG-----AYPPQGGYPPQGYPPPPAQGGYPPQGYPP----PPQGYPPAQGYPPQG 444

Query: 102 YPAPHHYPGHG 110
           YP P   P  G
Sbjct: 445 YPPPQGAPPQG 446

[Close]
BLAST of Cp4.1LG03g17250 vs. TrEMBL
Match: A0A0A0L4F2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126870 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 4.8e-55
Identity = 129/179 (72.07%), Postives = 136/179 (75.98%), Query Frame = 1 

Query: 1   MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGG 60
           MGGGKE E KDKGLFS+MA+FAAG HY H HGYPPPP Y GA YPPPGGYPP       G
Sbjct: 1   MGGGKENEDKDKGLFSNMAAFAAGHHYPHHHGYPPPP-YGGAAYPPPGGYPPP------G 60

Query: 61  YPPAAYPPPGGYPSAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGFGHGSG 120
           YPP  YPP GG+P  AYPPPGG           YPPAGYP PHHYPG+G    G+GHG G
Sbjct: 61  YPPTGYPPYGGHPHTAYPPPGG-----------YPPAGYPGPHHYPGYGH---GYGHGHG 120

Query: 121 MGGLLAGGAAAAAAAYGAHHLAHARPFGFG-----HGKFKHGKFGKRWKHGGGKFKKWK 175
           +GGLLAGGAAAAAAAYGAHHLAHARPFGFG     HGKFKHGKFGKRWKHGG +FKKWK
Sbjct: 121 VGGLLAGGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFKHGKFGKRWKHGGMRFKKWK 158

[Close]
BLAST of Cp4.1LG03g17250 vs. TrEMBL
Match: D7UB79_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0024g00800 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 5.0e-44
Identity = 122/198 (61.62%), Postives = 131/198 (66.16%), Query Frame = 1 

Query: 1   MGGGKE---EESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPP 60
           MGGGK+   EES DKGLFS++A FAAG HY  PHG      Y  + YPPPGGYPP+ YPP
Sbjct: 1   MGGGKDRPDEESSDKGLFSNLAGFAAG-HYRPPHGAYHSQGYPPSAYPPPGGYPPSGYPP 60

Query: 61  PGGYPPAAYPPPGGYPSAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGFGH 120
           PGGYPP+ YPPPGGYP A YPPPGGYPPA YPP G YPP+GYP P   P H       GH
Sbjct: 61  PGGYPPSGYPPPGGYPPAGYPPPGGYPPAPYPPPGGYPPSGYPGPSAPPYHS------GH 120

Query: 121 GSGMGGLLAGGAAAAAAAY-------GAHHLAHARPFGFG--------HGKFKHGKFGKR 175
           GS  G LLAGGAAAAAA Y       GAHHL H   +G G        HGKFKHGKFGKR
Sbjct: 121 GSNTGALLAGGAAAAAAVYGAHQLSHGAHHLGHGGYYGHGFGHHGKFKHGKFKHGKFGKR 180

[Close]
BLAST of Cp4.1LG03g17250 vs. TrEMBL
Match: A0A061F0Z6_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_025731 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.4e-40
Identity = 124/201 (61.69%), Postives = 133/201 (66.17%), Query Frame = 1 

Query: 1   MGGGKEE---ESKDKGLFSSMASFAAGQHYSHPHGYP----PPPPYAGAGYPPPGGYPPA 60
           MGGGK++   ES DKGLFS++A +AAG HY  P  YP    PP  Y  AGYPPPGG    
Sbjct: 1   MGGGKDKNEGESSDKGLFSNLAGYAAG-HYPPPGSYPSHGYPPQGYPPAGYPPPGG---- 60

Query: 61  AYPPPGGYPPAAYPPPGGYPSAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGL 120
            YPPPGGYPPA YPPPGG+P AAYPP GGYPPAGYPPHG YPPAGYP         GHG 
Sbjct: 61  -YPPPGGYPPAGYPPPGGHPPAAYPPHGGYPPAGYPPHGGYPPAGYP---------GHG- 120

Query: 121 GFGHGSGMGGLLAGGAAAAAAAYGAHH-------LAHARPFGFGHGKFKHGKF--GKRWK 175
              HG G+GGL+AGGAAAAAAAYGAHH       LAH   +G GHGKFKHGKF  GK  K
Sbjct: 121 --SHGHGVGGLIAGGAAAAAAAYGAHHVAHGAHNLAHGGYYGHGHGKFKHGKFKHGKFGK 180

[Close]
BLAST of Cp4.1LG03g17250 vs. TrEMBL
Match: B9I6F5_POPTR (Proline-rich family protein OS=Populus trichocarpa GN=POPTR_0013s06830g PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.3e-39
Identity = 122/208 (58.65%), Postives = 133/208 (63.94%), Query Frame = 1 

Query: 1   MGGGKEE---ESKDKGLFSSMASFAAGQHYSH-----PHGYPPPPPYAGAGYPPPGGYPP 60
           MGGGK++   ES DKGLFS++A +A G HY       PHGYP    Y  AGYPPPGGYPP
Sbjct: 1   MGGGKDKSDKESTDKGLFSNLAGYAGG-HYPPSAPYPPHGYPQQG-YPPAGYPPPGGYPP 60

Query: 61  AAYPPPGGYPPAAYPPPGGYPSAAYPPPGGY-PPAGYPPHGAYPPAGYPAP--HHYPGHG 120
           + YPPPGGYPPA YPPPGG     YPPPGGY PP GYPP GAYPPAGYP P   HY    
Sbjct: 61  SGYPPPGGYPPAGYPPPGG-----YPPPGGYPPPGGYPPPGAYPPAGYPGPSASHYS--- 120

Query: 121 GHGLGFGHGSGMGGLLAGGAAAAAAAYGAHHLAHAR-----------------PFGFGHG 175
                 GHG GMG +LAGGAAAAA AYGAH ++H                     G+GHG
Sbjct: 121 ------GHGPGMGTMLAGGAAAAAVAYGAHQMSHGGSHGYGHGGYHGYGHGKFKHGYGHG 180

[Close]
BLAST of Cp4.1LG03g17250 vs. TrEMBL
Match: U5FRC6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s06830g PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.3e-39
Identity = 122/208 (58.65%), Postives = 133/208 (63.94%), Query Frame = 1 

Query: 1   MGGGKEE---ESKDKGLFSSMASFAAGQHYSH-----PHGYPPPPPYAGAGYPPPGGYPP 60
           MGGGK++   ES DKGLFS++A +A G HY       PHGYP    Y  AGYPPPGGYPP
Sbjct: 1   MGGGKDKSDKESTDKGLFSNLAGYAGG-HYPPSAPYPPHGYPQQG-YPPAGYPPPGGYPP 60

Query: 61  AAYPPPGGYPPAAYPPPGGYPSAAYPPPGGY-PPAGYPPHGAYPPAGYPAP--HHYPGHG 120
           + YPPPGGYPPA YPPPGG     YPPPGGY PP GYPP GAYPPAGYP P   HY    
Sbjct: 61  SGYPPPGGYPPAGYPPPGG-----YPPPGGYPPPGGYPPPGAYPPAGYPGPSASHY---- 120

Query: 121 GHGLGFGHGSGMGGLLAGGAAAAAAAYGAHHLAHAR-----------------PFGFGHG 175
                 GHG GMG +LAGGAAAAA AYGAH ++H                     G+GHG
Sbjct: 121 -SATITGHGPGMGTMLAGGAAAAAVAYGAHQMSHGGSHGYGHGGYHGYGHGKFKHGYGHG 180

[Close]
BLAST of Cp4.1LG03g17250 vs. TAIR10
Match: AT5G45350.1 (AT5G45350.1 proline-rich family protein)

HSP 1 Score: 115.9 bits (289), Expect = 2.4e-26
Identity = 103/216 (47.69%), Postives = 111/216 (51.39%), Query Frame = 1 

Query: 3   GGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYP------ 62
           GG  +  KDKG                 HGYPP      AGYPPPG YPPA YP      
Sbjct: 2   GGDNDNDKDKGF----------------HGYPP------AGYPPPGAYPPAGYPQQGYPP 61

Query: 63  PPGGYPPAAYPP------PGGYPSAAYPPPGGYPPA----GYPP---HGAYPPAGYPAPH 122
           PPG YPPA YPP      PGGYP A  P  GGYPPA    GYPP   HG YPPAGYPA H
Sbjct: 62  PPGAYPPAGYPPGAYPPAPGGYPPA--PGYGGYPPAPGYGGYPPAPGHGGYPPAGYPAHH 121

Query: 123 HYPGHGGHGLGFGHGSGMGGLLAGGAAAAAAAYGAHHLAHAR------------------ 175
                       GH  G+GG++AG    AAAAYGAHH+AH+                   
Sbjct: 122 S-----------GHAGGIGGMIAG----AAAAYGAHHVAHSSHGPYGHAAYGHGFGHGHG 177

[Close]
BLAST of Cp4.1LG03g17250 vs. TAIR10
Match: AT5G17650.1 (AT5G17650.1 glycine/proline-rich protein)

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-24
Identity = 93/192 (48.44%), Postives = 106/192 (55.21%), Query Frame = 1 

Query: 3   GGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGGYP 62
           G  +    D+G F ++A FA GQ+  H HGY       G+ YP    YPP   PPP GYP
Sbjct: 2   GNDQHNHSDRGFFHNLAGFAGGQYPPHGHGYGHHGHGYGSSYP----YPPP--PPPHGYP 61

Query: 63  PAAYPPPGGYPSAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGFGHGSGMG 122
           P AYPP GGYP A Y PP GYPPAGYP HG YP  GYP     P H GH     H  G+G
Sbjct: 62  PVAYPPHGGYPPAGY-PPAGYPPAGYPAHG-YPSHGYPR----PSHSGH-----HHGGIG 121

Query: 123 GLLAGGAAAAAAAYGAHHLA---------HARPFGFG--------HGKFKHGKFGKR--- 175
            ++AGG AAAA   GAHH++         H   +G+G        HGKFKHGKFGK    
Sbjct: 122 AIIAGGVAAAA---GAHHMSHHHGHYGHHHGHGYGYGYHGHGKFKHGKFKHGKFGKHGMF 173

[Close]
BLAST of Cp4.1LG03g17250 vs. TAIR10
Match: AT4G19200.1 (AT4G19200.1 proline-rich family protein)

HSP 1 Score: 108.6 bits (270), Expect = 3.9e-24
Identity = 97/211 (45.97%), Postives = 111/211 (52.61%), Query Frame = 1 

Query: 1   MGGGKEE--ESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPP-GGYPPAAYPP 60
           MGGGK++  + ++KG                 HG+P      G  YPP  GGYPP  YPP
Sbjct: 1   MGGGKDKHHDEQEKGF----------------HGFP-----GGGHYPPAQGGYPPQGYPP 60

Query: 61  PGGYPPAAYPPPGGYPSAAYP-PPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGFG 120
             GYPPA   PP GYP  AYP  PGGYPPA     G YPPAGYPAP  +  H GH     
Sbjct: 61  QQGYPPAGGYPPAGYPPGAYPAAPGGYPPA----PGGYPPAGYPAPGAH--HSGHS---- 120

Query: 121 HGSGMGGLLAGGAAAAAAAYGAHHLAHA--RPFGF------------------GHGKFKH 175
            G G+GG++AG A AAAAAYGAHH+ HA   P+G                   GHGKFKH
Sbjct: 121 -GGGLGGMIAGAAGAAAAAYGAHHVGHASHNPYGHAVGHGGYGHAPAHGFGHGGHGKFKH 179

[Close]
BLAST of Cp4.1LG03g17250 vs. TAIR10
Match: AT1G31750.1 (AT1G31750.1 proline-rich family protein)

HSP 1 Score: 97.4 bits (241), Expect = 9.0e-21
Identity = 88/181 (48.62%), Postives = 96/181 (53.04%), Query Frame = 1 

Query: 3   GGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGGYP 62
           G  +   +DK  FS         H  H HGYPP        YPPP   P  AYPPPGGYP
Sbjct: 2   GKDDHHEQDKRFFS--------HHNHHGHGYPP------GAYPPP---PQGAYPPPGGYP 61

Query: 63  PAAYPPPGGYPSAAYPPPGGYPPAGYPPH-GAYPPAGYPAPHHYPGHGGHGLGFGHGSGM 122
           P  YPPP          P GYPPA YPP  GAYPPAGYP P         G   G G G+
Sbjct: 62  PQGYPPP----------PHGYPPAAYPPPPGAYPPAGYPGPS--------GPRPGFGGGV 121

Query: 123 GGLLAGGAAAAAAAYGAHHLAHARPFG-FGHGKFKHGKFG----KRWKH---GGGKFKKW 175
           GGL+AG A AAAAA G HH  H   +G  GHGK+K G FG    KR KH   GGGK+K+ 
Sbjct: 122 GGLIAGAATAAAAAMGGHHAGHHGGYGHHGHGKYKRGFFGGGKYKRGKHSMFGGGKYKRG 147

[Close]
BLAST of Cp4.1LG03g17250 vs. TAIR10
Match: AT3G49845.1 (AT3G49845.1 unknown protein)

HSP 1 Score: 54.7 bits (130), Expect = 6.7e-08
Identity = 44/80 (55.00%), Postives = 47/80 (58.75%), Query Frame = 1 

Query: 30  PHGYPPPPPYAGAGYPPPGGYPPAAYPPPGGYPPAAYPPP-----GGYPSAAYPPPGGYP 89
           P GYPP   Y  AGYPPP GYPP  Y P  GYPPA YPPP      GYP+  YPPP    
Sbjct: 15  PQGYPPKEGYPPAGYPPPAGYPPPQY-PQAGYPPAGYPPPQQGYGQGYPAQGYPPP--QY 74

Query: 90  PAGYPPHGAYPPAGYPAPHH 105
           P G+PP   YP  G P PH+
Sbjct: 75  PQGHPPQ--YPYQGPPPPHY 89

[Close]
BLAST of Cp4.1LG03g17250 vs. NCBI nr
Match: gi|659075552|ref|XP_008438205.1| (PREDICTED: glycine-rich protein A3 [Cucumis melo])

HSP 1 Score: 223.4 bits (568), Expect = 3.1e-55
Identity = 130/176 (73.86%), Postives = 136/176 (77.27%), Query Frame = 1 

Query: 1   MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGG 60
           MGGGKE E KDKGLFS+MA+FAAG HY H HGYPPPP Y GAGYPPPGGYPPA      G
Sbjct: 1   MGGGKENEDKDKGLFSNMAAFAAGHHYPHHHGYPPPP-YGGAGYPPPGGYPPA------G 60

Query: 61  YPPAAYPPPGGYPSAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGFGHGSG 120
           YPPA YPP GG+P  AYP  GG           YPPAGYP PHHYPG+     G GHG G
Sbjct: 61  YPPAGYPPYGGHPHTAYPYQGG-----------YPPAGYPGPHHYPGY-----GHGHGHG 120

Query: 121 MGGLLAGGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGG--GKFKKWK 175
           +GGLLAGGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGG  G+FKKWK
Sbjct: 121 VGGLLAGGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGGKFGRFKKWK 153

[Close]
BLAST of Cp4.1LG03g17250 vs. NCBI nr
Match: gi|449432291|ref|XP_004133933.1| (PREDICTED: glycine-rich protein A3 [Cucumis sativus])

HSP 1 Score: 222.2 bits (565), Expect = 6.9e-55
Identity = 129/179 (72.07%), Postives = 136/179 (75.98%), Query Frame = 1 

Query: 1   MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGG 60
           MGGGKE E KDKGLFS+MA+FAAG HY H HGYPPPP Y GA YPPPGGYPP       G
Sbjct: 1   MGGGKENEDKDKGLFSNMAAFAAGHHYPHHHGYPPPP-YGGAAYPPPGGYPPP------G 60

Query: 61  YPPAAYPPPGGYPSAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGFGHGSG 120
           YPP  YPP GG+P  AYPPPGG           YPPAGYP PHHYPG+G    G+GHG G
Sbjct: 61  YPPTGYPPYGGHPHTAYPPPGG-----------YPPAGYPGPHHYPGYGH---GYGHGHG 120

Query: 121 MGGLLAGGAAAAAAAYGAHHLAHARPFGFG-----HGKFKHGKFGKRWKHGGGKFKKWK 175
           +GGLLAGGAAAAAAAYGAHHLAHARPFGFG     HGKFKHGKFGKRWKHGG +FKKWK
Sbjct: 121 VGGLLAGGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFKHGKFGKRWKHGGMRFKKWK 158

[Close]
BLAST of Cp4.1LG03g17250 vs. NCBI nr
Match: gi|225436210|ref|XP_002268577.1| (PREDICTED: glycine-rich protein A3 [Vitis vinifera])

HSP 1 Score: 185.7 bits (470), Expect = 7.1e-44
Identity = 122/198 (61.62%), Postives = 131/198 (66.16%), Query Frame = 1 

Query: 1   MGGGKE---EESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPP 60
           MGGGK+   EES DKGLFS++A FAAG HY  PHG      Y  + YPPPGGYPP+ YPP
Sbjct: 1   MGGGKDRPDEESSDKGLFSNLAGFAAG-HYRPPHGAYHSQGYPPSAYPPPGGYPPSGYPP 60

Query: 61  PGGYPPAAYPPPGGYPSAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGFGH 120
           PGGYPP+ YPPPGGYP A YPPPGGYPPA YPP G YPP+GYP P   P H       GH
Sbjct: 61  PGGYPPSGYPPPGGYPPAGYPPPGGYPPAPYPPPGGYPPSGYPGPSAPPYHS------GH 120

Query: 121 GSGMGGLLAGGAAAAAAAY-------GAHHLAHARPFGFG--------HGKFKHGKFGKR 175
           GS  G LLAGGAAAAAA Y       GAHHL H   +G G        HGKFKHGKFGKR
Sbjct: 121 GSNTGALLAGGAAAAAAVYGAHQLSHGAHHLGHGGYYGHGFGHHGKFKHGKFKHGKFGKR 180

[Close]
BLAST of Cp4.1LG03g17250 vs. NCBI nr
Match: gi|743921743|ref|XP_011004939.1| (PREDICTED: glycine-rich protein A3 [Populus euphratica])

HSP 1 Score: 174.1 bits (440), Expect = 2.1e-40
Identity = 122/203 (60.10%), Postives = 129/203 (63.55%), Query Frame = 1 

Query: 1   MGGGKE---EESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPP 60
           MGGGK+   EES DKGLFS++A +A G        YPP  PY   GYP  G YPPA YPP
Sbjct: 1   MGGGKDKSDEESTDKGLFSNLAGYAGGH-------YPPSAPYPPHGYPQQG-YPPAGYPP 60

Query: 61  PGGYPPAAYPPPGGYPSAAYPPPGGY-PPAGYPPHGAYPPAGYPAP--HHYPGHGGHGLG 120
           PGGYPP  YPPPGGYP A YPPPGGY PP GYPP GAYPPAGYP P   HY         
Sbjct: 61  PGGYPPPGYPPPGGYPPAGYPPPGGYPPPGGYPPPGAYPPAGYPGPSASHYS-------- 120

Query: 121 FGHGSGMGGLLAGGAAAAAAAYGAHHLAHAR-----------------PFGFGHGKFKHG 175
            GHG GMG LLAGGAAAAAAAYGAH L+H                     G+GHGKFKHG
Sbjct: 121 -GHGPGMGTLLAGGAAAAAAAYGAHQLSHGGSHGYGHGGYHGYGHGKFKHGYGHGKFKHG 180

[Close]
BLAST of Cp4.1LG03g17250 vs. NCBI nr
Match: gi|590640091|ref|XP_007029859.1| (Uncharacterized protein isoform 2 [Theobroma cacao])

HSP 1 Score: 171.8 bits (434), Expect = 1.1e-39
Identity = 124/201 (61.69%), Postives = 133/201 (66.17%), Query Frame = 1 

Query: 1   MGGGKEE---ESKDKGLFSSMASFAAGQHYSHPHGYP----PPPPYAGAGYPPPGGYPPA 60
           MGGGK++   ES DKGLFS++A +AAG HY  P  YP    PP  Y  AGYPPPGG    
Sbjct: 1   MGGGKDKNEGESSDKGLFSNLAGYAAG-HYPPPGSYPSHGYPPQGYPPAGYPPPGG---- 60

Query: 61  AYPPPGGYPPAAYPPPGGYPSAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGL 120
            YPPPGGYPPA YPPPGG+P AAYPP GGYPPAGYPPHG YPPAGYP         GHG 
Sbjct: 61  -YPPPGGYPPAGYPPPGGHPPAAYPPHGGYPPAGYPPHGGYPPAGYP---------GHG- 120

Query: 121 GFGHGSGMGGLLAGGAAAAAAAYGAHH-------LAHARPFGFGHGKFKHGKF--GKRWK 175
              HG G+GGL+AGGAAAAAAAYGAHH       LAH   +G GHGKFKHGKF  GK  K
Sbjct: 121 --SHGHGVGGLIAGGAAAAAAAYGAHHVAHGAHNLAHGGYYGHGHGKFKHGKFKHGKFGK 180

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g17250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GRP3_DAUCA2.7e-1949.69Glycine-rich protein A3 OS=Daucus carota PE=2 SV=1[more]
OPSD_SEPOF2.6e-0656.34Rhodopsin OS=Sepia officinalis GN=RHO PE=2 SV=1[more]
BLAST of Cp4.1LG03g17250 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4F2_CUCSA4.8e-5572.07Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126870 PE=4 SV=1[more]
D7UB79_VITVI5.0e-4461.62Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0024g00800 PE=4 SV=... [more]
A0A061F0Z6_THECC7.4e-4061.69Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_025731 PE=4 SV=1[more]
B9I6F5_POPTR1.3e-3958.65Proline-rich family protein OS=Populus trichocarpa GN=POPTR_0013s06830g PE=4 SV=... [more]
U5FRC6_POPTR6.3e-3958.65Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s06830g PE=4 SV=1[more]
BLAST of Cp4.1LG03g17250 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G45350.12.4e-2647.69 proline-rich family protein[more]
AT5G17650.13.0e-2448.44 glycine/proline-rich protein[more]
AT4G19200.13.9e-2445.97 proline-rich family protein[more]
AT1G31750.19.0e-2148.62 proline-rich family protein[more]
AT3G49845.16.7e-0855.00 unknown protein[more]
BLAST of Cp4.1LG03g17250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075552|ref|XP_008438205.1|3.1e-5573.86PREDICTED: glycine-rich protein A3 [Cucumis melo][more]
gi|449432291|ref|XP_004133933.1|6.9e-5572.07PREDICTED: glycine-rich protein A3 [Cucumis sativus][more]
gi|225436210|ref|XP_002268577.1|7.1e-4461.62PREDICTED: glycine-rich protein A3 [Vitis vinifera][more]
gi|743921743|ref|XP_011004939.1|2.1e-4060.10PREDICTED: glycine-rich protein A3 [Populus euphratica][more]
gi|590640091|ref|XP_007029859.1|1.1e-3961.69Uncharacterized protein isoform 2 [Theobroma cacao][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g17250.1Cp4.1LG03g17250.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g17250Carg14853Silver-seed gourdcarcpeB0884
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g17250Watermelon (97103) v1cpewmB613
Cp4.1LG03g17250Watermelon (97103) v1cpewmB625
Cp4.1LG03g17250Silver-seed gourdcarcpeB0327
Cp4.1LG03g17250Melon (DHL92) v3.5.1cpemeB552
Cp4.1LG03g17250Melon (DHL92) v3.5.1cpemeB585
Cp4.1LG03g17250Cucumber (Gy14) v2cgybcpeB406
Cp4.1LG03g17250Cucumber (Gy14) v2cgybcpeB834
Cp4.1LG03g17250Melon (DHL92) v3.6.1cpemedB655
Cp4.1LG03g17250Melon (DHL92) v3.6.1cpemedB693
Cp4.1LG03g17250Silver-seed gourdcarcpeB1331
Cp4.1LG03g17250Silver-seed gourdcarcpeB1505
Cp4.1LG03g17250Cucumber (Chinese Long) v3cpecucB0759
Cp4.1LG03g17250Cucumber (Chinese Long) v3cpecucB0785
Cp4.1LG03g17250Wax gourdcpewgoB0759
Cp4.1LG03g17250Wax gourdcpewgoB0784
Cp4.1LG03g17250Cucurbita pepo (Zucchini)cpecpeB184
Cp4.1LG03g17250Cucurbita pepo (Zucchini)cpecpeB243
Cp4.1LG03g17250Cucurbita pepo (Zucchini)cpecpeB339
Cp4.1LG03g17250Cucurbita pepo (Zucchini)cpecpeB482
Cp4.1LG03g17250Cucumber (Gy14) v1cgycpeB0682
Cp4.1LG03g17250Cucumber (Gy14) v1cgycpeB0965
Cp4.1LG03g17250Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g17250Cucurbita maxima (Rimu)cmacpeB402
Cp4.1LG03g17250Cucurbita maxima (Rimu)cmacpeB837
Cp4.1LG03g17250Cucurbita maxima (Rimu)cmacpeB926
Cp4.1LG03g17250Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g17250Cucurbita moschata (Rifu)cmocpeB364
Cp4.1LG03g17250Cucurbita moschata (Rifu)cmocpeB787
Cp4.1LG03g17250Cucurbita moschata (Rifu)cmocpeB860
Cp4.1LG03g17250Wild cucumber (PI 183967)cpecpiB611
Cp4.1LG03g17250Wild cucumber (PI 183967)cpecpiB633
Cp4.1LG03g17250Cucumber (Chinese Long) v2cpecuB609
Cp4.1LG03g17250Cucumber (Chinese Long) v2cpecuB629
Cp4.1LG03g17250Bottle gourd (USVL1VR-Ls)cpelsiB482
Cp4.1LG03g17250Bottle gourd (USVL1VR-Ls)cpelsiB506
Cp4.1LG03g17250Watermelon (Charleston Gray)cpewcgB559
Cp4.1LG03g17250Watermelon (Charleston Gray)cpewcgB565